| Clone Name | baet114d09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY887063.1| Hordeum vulgare aerobic Mg-protoporphyrin IX monomethyl ester cyclase (Xantha-l) gene, complete cds Length = 2097 Score = 389 bits (196), Expect = e-105 Identities = 196/196 (100%) Strand = Plus / Plus Query: 216 gaagcccggctcaccgaagaagcggggcaagacggaggtcaacgagtctctgctcacgcc 275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177 gaagcccggctcaccgaagaagcggggcaagacggaggtcaacgagtctctgctcacgcc 236 Query: 276 gcggttctacaccacggacttcgacgagatggagcagctcttcaacgccgagattaacaa 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 gcggttctacaccacggacttcgacgagatggagcagctcttcaacgccgagattaacaa 296 Query: 336 gcagctcaaccaggacgagttcgacgcgctgctgcaggagttcaagacggactacaacca 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 297 gcagctcaaccaggacgagttcgacgcgctgctgcaggagttcaagacggactacaacca 356 Query: 396 gacccacttcatccgc 411 |||||||||||||||| Sbjct: 357 gacccacttcatccgc 372 Score = 240 bits (121), Expect = 3e-60 Identities = 121/121 (100%) Strand = Plus / Plus Query: 40 cctcggaagatggcgtccgccatggagctctccctcctcaaccccgcaatgcaccactac 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 cctcggaagatggcgtccgccatggagctctccctcctcaaccccgcaatgcaccactac 60 Query: 100 ggcatcgccgccaaaacggcctcccacctcccggttgtccccgcacgccgggcctcttcc 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggcatcgccgccaaaacggcctcccacctcccggttgtccccgcacgccgggcctcttcc 120 Query: 160 g 160 | Sbjct: 121 g 121
>ref|NM_188121.1| Oryza sativa (japonica cultivar-group), Ozsa8553 predicted mRNA Length = 1227 Score = 246 bits (124), Expect = 5e-62 Identities = 166/180 (92%) Strand = Plus / Plus Query: 232 aagaagcggggcaagacggaggtcaacgagtctctgctcacgccgcggttctacaccacg 291 |||||||| || ||||||||| || | ||| | ||||| ||||||||||||||||||||| Sbjct: 157 aagaagcgcgggaagacggagatccaggagacgctgctgacgccgcggttctacaccacg 216 Query: 292 gacttcgacgagatggagcagctcttcaacgccgagattaacaagcagctcaaccaggac 351 ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||| Sbjct: 217 gacttcgacgagatggagcggctgttcaacgccgagatcaacaagcagctcaaccaggag 276 Query: 352 gagttcgacgcgctgctgcaggagttcaagacggactacaaccagacccacttcatccgc 411 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 277 gagttcgacgcgctgctgcaggagttcaagacggactataaccagacccacttcgtccgc 336 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 55 tccgccatggagctctccctcctcaaccc 83 ||||||||||||||||||||||||||||| Sbjct: 10 tccgccatggagctctccctcctcaaccc 38
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 246 bits (124), Expect = 5e-62 Identities = 166/180 (92%) Strand = Plus / Plus Query: 232 aagaagcggggcaagacggaggtcaacgagtctctgctcacgccgcggttctacaccacg 291 |||||||| || ||||||||| || | ||| | ||||| ||||||||||||||||||||| Sbjct: 9873555 aagaagcgcgggaagacggagatccaggagacgctgctgacgccgcggttctacaccacg 9873614 Query: 292 gacttcgacgagatggagcagctcttcaacgccgagattaacaagcagctcaaccaggac 351 ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||| Sbjct: 9873615 gacttcgacgagatggagcggctgttcaacgccgagatcaacaagcagctcaaccaggag 9873674 Query: 352 gagttcgacgcgctgctgcaggagttcaagacggactacaaccagacccacttcatccgc 411 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 9873675 gagttcgacgcgctgctgcaggagttcaagacggactataaccagacccacttcgtccgc 9873734 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 55 tccgccatggagctctccctcctcaaccc 83 ||||||||||||||||||||||||||||| Sbjct: 9873408 tccgccatggagctctccctcctcaaccc 9873436
>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025D05 Length = 145684 Score = 246 bits (124), Expect = 5e-62 Identities = 166/180 (92%) Strand = Plus / Plus Query: 232 aagaagcggggcaagacggaggtcaacgagtctctgctcacgccgcggttctacaccacg 291 |||||||| || ||||||||| || | ||| | ||||| ||||||||||||||||||||| Sbjct: 137805 aagaagcgcgggaagacggagatccaggagacgctgctgacgccgcggttctacaccacg 137864 Query: 292 gacttcgacgagatggagcagctcttcaacgccgagattaacaagcagctcaaccaggac 351 ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||| Sbjct: 137865 gacttcgacgagatggagcggctgttcaacgccgagatcaacaagcagctcaaccaggag 137924 Query: 352 gagttcgacgcgctgctgcaggagttcaagacggactacaaccagacccacttcatccgc 411 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 137925 gagttcgacgcgctgctgcaggagttcaagacggactataaccagacccacttcgtccgc 137984 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 55 tccgccatggagctctccctcctcaaccc 83 ||||||||||||||||||||||||||||| Sbjct: 137658 tccgccatggagctctccctcctcaaccc 137686
>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0003H10 Length = 142418 Score = 246 bits (124), Expect = 5e-62 Identities = 166/180 (92%) Strand = Plus / Plus Query: 232 aagaagcggggcaagacggaggtcaacgagtctctgctcacgccgcggttctacaccacg 291 |||||||| || ||||||||| || | ||| | ||||| ||||||||||||||||||||| Sbjct: 9321 aagaagcgcgggaagacggagatccaggagacgctgctgacgccgcggttctacaccacg 9380 Query: 292 gacttcgacgagatggagcagctcttcaacgccgagattaacaagcagctcaaccaggac 351 ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||| Sbjct: 9381 gacttcgacgagatggagcggctgttcaacgccgagatcaacaagcagctcaaccaggag 9440 Query: 352 gagttcgacgcgctgctgcaggagttcaagacggactacaaccagacccacttcatccgc 411 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 9441 gagttcgacgcgctgctgcaggagttcaagacggactataaccagacccacttcgtccgc 9500 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 55 tccgccatggagctctccctcctcaaccc 83 ||||||||||||||||||||||||||||| Sbjct: 9174 tccgccatggagctctccctcctcaaccc 9202
>dbj|AK069333.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014B03, full insert sequence Length = 1691 Score = 246 bits (124), Expect = 5e-62 Identities = 166/180 (92%) Strand = Plus / Plus Query: 232 aagaagcggggcaagacggaggtcaacgagtctctgctcacgccgcggttctacaccacg 291 |||||||| || ||||||||| || | ||| | ||||| ||||||||||||||||||||| Sbjct: 205 aagaagcgcgggaagacggagatccaggagacgctgctgacgccgcggttctacaccacg 264 Query: 292 gacttcgacgagatggagcagctcttcaacgccgagattaacaagcagctcaaccaggac 351 ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||| Sbjct: 265 gacttcgacgagatggagcggctgttcaacgccgagatcaacaagcagctcaaccaggag 324 Query: 352 gagttcgacgcgctgctgcaggagttcaagacggactacaaccagacccacttcatccgc 411 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 325 gagttcgacgcgctgctgcaggagttcaagacggactataaccagacccacttcgtccgc 384 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 55 tccgccatggagctctccctcctcaaccc 83 ||||||||||||||||||||||||||||| Sbjct: 58 tccgccatggagctctccctcctcaaccc 86
>dbj|AK059435.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F10, full insert sequence Length = 1944 Score = 246 bits (124), Expect = 5e-62 Identities = 166/180 (92%) Strand = Plus / Plus Query: 232 aagaagcggggcaagacggaggtcaacgagtctctgctcacgccgcggttctacaccacg 291 |||||||| || ||||||||| || | ||| | ||||| ||||||||||||||||||||| Sbjct: 195 aagaagcgcgggaagacggagatccaggagacgctgctgacgccgcggttctacaccacg 254 Query: 292 gacttcgacgagatggagcagctcttcaacgccgagattaacaagcagctcaaccaggac 351 ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||| Sbjct: 255 gacttcgacgagatggagcggctgttcaacgccgagatcaacaagcagctcaaccaggag 314 Query: 352 gagttcgacgcgctgctgcaggagttcaagacggactacaaccagacccacttcatccgc 411 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 315 gagttcgacgcgctgctgcaggagttcaagacggactataaccagacccacttcgtccgc 374 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 55 tccgccatggagctctccctcctcaaccc 83 ||||||||||||||||||||||||||||| Sbjct: 48 tccgccatggagctctccctcctcaaccc 76
>gb|AY108897.1| Zea mays PCO080076 mRNA sequence Length = 1774 Score = 242 bits (122), Expect = 7e-61 Identities = 161/174 (92%) Strand = Plus / Plus Query: 232 aagaagcggggcaagacggaggtcaacgagtctctgctcacgccgcggttctacaccacg 291 ||||||||||||||||||||| || | ||| | ||||||||||| ||||||||||||||| Sbjct: 196 aagaagcggggcaagacggagatccaggagacgctgctcacgccccggttctacaccacg 255 Query: 292 gacttcgacgagatggagcagctcttcaacgccgagattaacaagcagctcaaccaggac 351 ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 256 gacttcgacgagatggagcgcctcttcaacgccgagatcaacaagcagctcaaccaggcg 315 Query: 352 gagttcgacgcgctgctgcaggagttcaagacggactacaaccagacccacttc 405 ||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 316 gagttcgacgccctgctacaggagttcaagacggactacaaccagacccacttc 369 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 49 atggcgtccgccatggagctctccctcctcaaccccgc 86 ||||| ||||||||||||||||| |||||||||||||| Sbjct: 40 atggcctccgccatggagctctcgctcctcaaccccgc 77
>dbj|AK058287.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E02, full insert sequence Length = 1533 Score = 238 bits (120), Expect = 1e-59 Identities = 165/180 (91%) Strand = Plus / Plus Query: 232 aagaagcggggcaagacggaggtcaacgagtctctgctcacgccgcggttctacaccacg 291 |||||||| || ||||||||| || | ||| | ||||| ||||||||||||||||||||| Sbjct: 191 aagaagcgcgggaagacggagatccaggagacgctgctgacgccgcggttctacaccacg 250 Query: 292 gacttcgacgagatggagcagctcttcaacgccgagattaacaagcagctcaaccaggac 351 ||||||||||||||||||| ||| |||||||||||||| ||| |||||||||||||||| Sbjct: 251 gacttcgacgagatggagcggctgttcaacgccgagatcaacgagcagctcaaccaggag 310 Query: 352 gagttcgacgcgctgctgcaggagttcaagacggactacaaccagacccacttcatccgc 411 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| Sbjct: 311 gagttcgacgcgctgctgcaggagttcaagacggactataaccagacccacttcgtccgc 370 Score = 58.0 bits (29), Expect = 2e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 55 tccgccatggagctctccctcctcaaccc 83 ||||||||||||||||||||||||||||| Sbjct: 44 tccgccatggagctctccctcctcaaccc 72
>ref|NM_115553.2| Arabidopsis thaliana AT103 (DICARBOXYLATE DIIRON 1) AT3G56940 (AT103) mRNA, complete cds Length = 1602 Score = 73.8 bits (37), Expect = 4e-10 Identities = 100/121 (82%) Strand = Plus / Plus Query: 278 ggttctacaccacggacttcgacgagatggagcagctcttcaacgccgagattaacaagc 337 |||||||||| ||||||||||| || ||||| ||||| |||||| | ||||| |||||| Sbjct: 255 ggttctacacgacggacttcgaggaaatggaacagcttttcaacacggagatcaacaaga 314 Query: 338 agctcaaccaggacgagttcgacgcgctgctgcaggagttcaagacggactacaaccaga 397 | || ||| | | |||||||| || ||||| || ||||||||||| || |||||||||| Sbjct: 315 accttaacgaagcagagttcgaggctctgcttcaagagttcaagaccgattacaaccaga 374 Query: 398 c 398 | Sbjct: 375 c 375
>emb|AL390921.1|ATT8M16 Arabidopsis thaliana DNA chromosome 3, BAC clone T8M16 Length = 107271 Score = 73.8 bits (37), Expect = 4e-10 Identities = 100/121 (82%) Strand = Plus / Plus Query: 278 ggttctacaccacggacttcgacgagatggagcagctcttcaacgccgagattaacaagc 337 |||||||||| ||||||||||| || ||||| ||||| |||||| | ||||| |||||| Sbjct: 92722 ggttctacacgacggacttcgaggaaatggaacagcttttcaacacggagatcaacaaga 92781 Query: 338 agctcaaccaggacgagttcgacgcgctgctgcaggagttcaagacggactacaaccaga 397 | || ||| | | |||||||| || ||||| || ||||||||||| || |||||||||| Sbjct: 92782 accttaacgaagcagagttcgaggctctgcttcaagagttcaagaccgattacaaccaga 92841 Query: 398 c 398 | Sbjct: 92842 c 92842
>emb|AL138655.1|ATF24I3 Arabidopsis thaliana DNA chromosome 3, BAC clone F24I3 Length = 91303 Score = 73.8 bits (37), Expect = 4e-10 Identities = 100/121 (82%) Strand = Plus / Plus Query: 278 ggttctacaccacggacttcgacgagatggagcagctcttcaacgccgagattaacaagc 337 |||||||||| ||||||||||| || ||||| ||||| |||||| | ||||| |||||| Sbjct: 4809 ggttctacacgacggacttcgaggaaatggaacagcttttcaacacggagatcaacaaga 4868 Query: 338 agctcaaccaggacgagttcgacgcgctgctgcaggagttcaagacggactacaaccaga 397 | || ||| | | |||||||| || ||||| || ||||||||||| || |||||||||| Sbjct: 4869 accttaacgaagcagagttcgaggctctgcttcaagagttcaagaccgattacaaccaga 4928 Query: 398 c 398 | Sbjct: 4929 c 4929
>gb|AF236101.1| Arabidopsis thaliana putative dicarboxylate diiron protein (Crd1) mRNA, complete cds Length = 1407 Score = 73.8 bits (37), Expect = 4e-10 Identities = 100/121 (82%) Strand = Plus / Plus Query: 278 ggttctacaccacggacttcgacgagatggagcagctcttcaacgccgagattaacaagc 337 |||||||||| ||||||||||| || ||||| ||||| |||||| | ||||| |||||| Sbjct: 245 ggttctacacgacggacttcgaggaaatggaacagcttttcaacacggagatcaacaaga 304 Query: 338 agctcaaccaggacgagttcgacgcgctgctgcaggagttcaagacggactacaaccaga 397 | || ||| | | |||||||| || ||||| || ||||||||||| || |||||||||| Sbjct: 305 accttaacgaagcagagttcgaggctctgcttcaagagttcaagaccgattacaaccaga 364 Query: 398 c 398 | Sbjct: 365 c 365
>gb|U38232.1|ATU38232 Arabidopsis thaliana AT103 mRNA, complete cds Length = 1349 Score = 73.8 bits (37), Expect = 4e-10 Identities = 100/121 (82%) Strand = Plus / Plus Query: 278 ggttctacaccacggacttcgacgagatggagcagctcttcaacgccgagattaacaagc 337 |||||||||| ||||||||||| || ||||| ||||| |||||| | ||||| |||||| Sbjct: 221 ggttctacacgacggacttcgaggaaatggaacagcttttcaacacggagatcaacaaga 280 Query: 338 agctcaaccaggacgagttcgacgcgctgctgcaggagttcaagacggactacaaccaga 397 | || ||| | | |||||||| || ||||| || ||||||||||| || |||||||||| Sbjct: 281 accttaacgaagcagagttcgaggctctgcttcaagagttcaagaccgattacaaccaga 340 Query: 398 c 398 | Sbjct: 341 c 341
>gb|U37437.1|INU37437 Ipomoea nil PNIL34 mRNA, complete cds Length = 1403 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 265 ctgctcacgccgcggttctacaccacggacttcgacgagatggagcagctcttcaacgcc 324 ||||| |||||| |||||||||| ||||||||||||||||||||| ||| |||||| | Sbjct: 195 ctgctgacgccgaggttctacacgacggacttcgacgagatggagatgctgttcaacacg 254 Query: 325 gagattaacaag 336 ||||| |||||| Sbjct: 255 gagatcaacaag 266 Score = 63.9 bits (32), Expect = 4e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 370 caggagttcaagacggactacaaccagacccacttc 405 ||||||||||||| |||||||||||||||||||||| Sbjct: 297 caggagttcaagaaggactacaaccagacccacttc 332
>gb|AF237671.1|AF237671 Chlamydomonas reinhardtii copper response defect 1 protein (Crd1) mRNA, complete cds Length = 2176 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 280 ttctacaccacggacttcgacgagatggagcagctcttca 319 ||||||||||| ||||||||||||||||||||||| |||| Sbjct: 358 ttctacaccaccgacttcgacgagatggagcagctgttca 397
>dbj|AP004541.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04C07, TM0098e, complete sequence Length = 45364 Score = 61.9 bits (31), Expect = 2e-06 Identities = 103/127 (81%) Strand = Plus / Plus Query: 278 ggttctacaccacggacttcgacgagatggagcagctcttcaacgccgagattaacaagc 337 ||||||||||||| || || || ||||||||| || |||||| | ||||| |||||| Sbjct: 28368 ggttctacaccactgattttgatgagatggagacccttttcaacactgagatcaacaaga 28427 Query: 338 agctcaaccaggacgagttcgacgcgctgctgcaggagttcaagacggactacaaccaga 397 | || ||| || | ||||| || || ||||| |||||||||||||| || |||||||||| Sbjct: 28428 acctgaacgagcatgagtttgaagctctgcttcaggagttcaagactgattacaaccaga 28487 Query: 398 cccactt 404 | ||||| Sbjct: 28488 ctcactt 28494
>gb|AY221168.2| Nicotiana tabacum ZIP mRNA, complete cds Length = 1323 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 265 ctgctcacgccgcggttctacaccacggacttcgacgagatg 306 ||||| |||||| |||||||||| |||||||||||||||||| Sbjct: 89 ctgctgacgccgaggttctacacgacggacttcgacgagatg 130
>gb|AY322555.1| Rosa davurica putative fatty acid desaturase RDZIP mRNA, partial cds Length = 999 Score = 60.0 bits (30), Expect = 6e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 289 acggacttcgacgagatggagcagctcttcaacgccgagattaacaagcagctcaaccag 348 ||||||||||| |||||||| ||||| |||||| | ||||| |||||| | || ||| || Sbjct: 1 acggacttcgaggagatggaacagcttttcaacacggagatcaacaagaaccttaacgag 60 Query: 349 gacgagttcgacgcgctgctgcaggagttcaagacggactacaaccagac 398 || |||||| || ||||| || ||||||||||| || ||||| ||||| Sbjct: 61 gaagagttcattgctctgcttcaagagttcaagactgattacaatcagac 110
>gb|AY322554.1| Salix babylonica putative fatty acid desaturase SBZIP mRNA, partial cds Length = 999 Score = 60.0 bits (30), Expect = 6e-06 Identities = 90/110 (81%) Strand = Plus / Plus Query: 289 acggacttcgacgagatggagcagctcttcaacgccgagattaacaagcagctcaaccag 348 ||||||||||| |||||||||||||| |||||| | ||||| |||||| | | ||| || Sbjct: 1 acggacttcgaggagatggagcagcttttcaacacggagatcaacaagaaccctaacgag 60 Query: 349 gacgagttcgacgcgctgctgcaggagttcaagacggactacaaccagac 398 || |||||| || ||||| || ||||||||||| || ||||| ||||| Sbjct: 61 gaagagttcattgctctgcttcaagagttcaagactgattacaatcagac 110
>gb|AF337038.2| Chlamydomonas reinhardtii copper target homolog 1 protein (CTH1) gene, complete cds; nuclear gene for chloroplast product Length = 5249 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 265 ctgctcacgccgcggttctacaccacggacttcgacgagatggagc 310 |||||||| || || ||||||||||| |||||||| |||||||||| Sbjct: 2319 ctgctcactcctcgcttctacaccaccgacttcgatgagatggagc 2364 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Plus Query: 352 gagttcgacgcgctgctgcaggagttcaagacggactacaaccagacccacttcatccgc 411 |||||||| ||| ||||| | ||||||||| ||||||||||||| ||||||| ||||| Sbjct: 2406 gagttcgaggcgatgctgaacgagttcaagctggactacaaccagcgccacttcgtccgc 2465
>gb|AF337037.3| Chlamydomonas reinhardtii copper target homolog 1 protein (CTH1) mRNA, complete cds; nuclear gene for chloroplast product, alternatively spliced Length = 2149 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 265 ctgctcacgccgcggttctacaccacggacttcgacgagatggagc 310 |||||||| || || ||||||||||| |||||||| |||||||||| Sbjct: 281 ctgctcactcctcgcttctacaccaccgacttcgatgagatggagc 326 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Plus Query: 352 gagttcgacgcgctgctgcaggagttcaagacggactacaaccagacccacttcatccgc 411 |||||||| ||| ||||| | ||||||||| ||||||||||||| ||||||| ||||| Sbjct: 368 gagttcgaggcgatgctgaacgagttcaagctggactacaaccagcgccacttcgtccgc 427
>gb|AF426027.2| Chlamydomonas reinhardtii copper target homolog 1 protein (CTH1) mRNA, partial cds; nuclear gene for chloroplast product, alternatively spliced Length = 3096 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 265 ctgctcacgccgcggttctacaccacggacttcgacgagatggagc 310 |||||||| || || ||||||||||| |||||||| |||||||||| Sbjct: 1245 ctgctcactcctcgcttctacaccaccgacttcgatgagatggagc 1290 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Plus Query: 352 gagttcgacgcgctgctgcaggagttcaagacggactacaaccagacccacttcatccgc 411 |||||||| ||| ||||| | ||||||||| ||||||||||||| ||||||| ||||| Sbjct: 1332 gagttcgaggcgatgctgaacgagttcaagctggactacaaccagcgccacttcgtccgc 1391
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Minus Query: 268 ctcacgccgcggttctacaccacggact 295 ||||||||||||||||||||||| |||| Sbjct: 4536828 ctcacgccgcggttctacaccaccgact 4536801
>gb|AF226628.1|AF226628 Chlamydomonas reinhardtii copper response target 1 protein (CRD1) gene, complete cds; nuclear gene for chloroplast product Length = 4205 Score = 48.1 bits (24), Expect = 0.023 Identities = 27/28 (96%) Strand = Plus / Plus Query: 292 gacttcgacgagatggagcagctcttca 319 ||||||||||||||||||||||| |||| Sbjct: 1519 gacttcgacgagatggagcagctgttca 1546
>gb|AY456957.2| Gossypium hirsutum putative leucine zipper protein (ZIP) mRNA, partial cds Length = 1411 Score = 46.1 bits (23), Expect = 0.089 Identities = 101/127 (79%) Strand = Plus / Plus Query: 278 ggttctacaccacggacttcgacgagatggagcagctcttcaacgccgagattaacaagc 337 |||| ||||| || ||||| || || |||||| ||| |||||| | |||||||||||| Sbjct: 252 ggttttacacaaccgactttgatgaaatggaggcgcttttcaacactgagattaacaaga 311 Query: 338 agctcaaccaggacgagttcgacgcgctgctgcaggagttcaagacggactacaaccaga 397 | || |||||| ||| || || | |||||||| ||||||||||| ||||| || |||| Sbjct: 312 accttaaccagtccgaatttgagtcactgctgcaagagttcaagactgactataatcaga 371 Query: 398 cccactt 404 | ||||| Sbjct: 372 cgcactt 378
>gb|AY912081.1| Uncultured proteobacterium DelRiverFos13D03 clone DelRiverFos13D03, complete sequence Length = 34908 Score = 46.1 bits (23), Expect = 0.089 Identities = 32/35 (91%) Strand = Plus / Plus Query: 274 ccgcggttctacaccacggacttcgacgagatgga 308 ||||| || |||||||| ||||||||||||||||| Sbjct: 13251 ccgcgcttttacaccaccgacttcgacgagatgga 13285
>gb|AE010360.1| Methanopyrus kandleri AV19 section 59 of 157 of the complete genome Length = 12845 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 ggacttcgacgagatggagcag 312 |||||||||||||||||||||| Sbjct: 10414 ggacttcgacgagatggagcag 10393
>gb|AC149484.1| Populus trichocarpa clone Pop1-69M19, complete sequence Length = 96930 Score = 44.1 bits (22), Expect = 0.35 Identities = 34/38 (89%) Strand = Plus / Plus Query: 367 ctgcaggagttcaagacggactacaaccagacccactt 404 ||||| || |||||||| |||||||||||||| ||||| Sbjct: 94246 ctgcaagaattcaagactgactacaaccagactcactt 94283
>ref|XM_513717.1| PREDICTED: Pan troglodytes similar to HSPC182 protein (LOC457201), mRNA Length = 3684 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 acgagttcgacgcgctgctgcaggagttc 378 ||||| |||||| |||||||||||||||| Sbjct: 3608 acgagatcgacgagctgctgcaggagttc 3636
>ref|XM_865939.1| PREDICTED: Bos taurus similar to Ssu72 RNA polymerase II CTD phosphatase homolog, transcript variant 2 (LOC614837), mRNA Length = 998 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 acgagttcgacgcgctgctgcaggagttc 378 ||||| |||||| |||||||||||||||| Sbjct: 509 acgagatcgacgagctgctgcaggagttc 537
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 cgagttcgacgcgctgctgca 371 ||||||||||||||||||||| Sbjct: 1544094 cgagttcgacgcgctgctgca 1544114
>gb|BC018909.2| Homo sapiens SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:4054323) Length = 1352 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 acgagttcgacgcgctgctgcaggagttc 378 ||||| |||||| |||||||||||||||| Sbjct: 818 acgagatcgacgagctgctgcaggagttc 846
>gb|BC008070.2| Homo sapiens SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae), mRNA (cDNA clone MGC:2805 IMAGE:2961422), complete cds Length = 1346 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 acgagttcgacgcgctgctgcaggagttc 378 ||||| |||||| |||||||||||||||| Sbjct: 782 acgagatcgacgagctgctgcaggagttc 810
>emb|AL645728.31| Human DNA sequence from clone RP5-832C2 on chromosome 1 Contains the 3' end of a novel gene, two novel genes and four CpG islands, complete sequence Length = 87105 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 acgagttcgacgcgctgctgcaggagttc 378 ||||| |||||| |||||||||||||||| Sbjct: 39029 acgagatcgacgagctgctgcaggagttc 39057
>ref|NM_014188.2| Homo sapiens SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae) (SSU72), mRNA Length = 1319 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 acgagttcgacgcgctgctgcaggagttc 378 ||||| |||||| |||||||||||||||| Sbjct: 834 acgagatcgacgagctgctgcaggagttc 862
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 351 cgagttcgacgcgctgctgca 371 ||||||||||||||||||||| Sbjct: 2878839 cgagttcgacgcgctgctgca 2878859
>emb|BX569692.1| Synechococcus sp. WH8102 complete genome; segment 4/7 Length = 345997 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 268 ctcacgccgcggttctacaccacggactt 296 ||||| |||||||| |||||||||||||| Sbjct: 144320 ctcacaccgcggttttacaccacggactt 144292
>dbj|AK127149.1| Homo sapiens cDNA FLJ45206 fis, clone BRCAN2010581 Length = 2238 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 acgagttcgacgcgctgctgcaggagttc 378 ||||| |||||| |||||||||||||||| Sbjct: 1770 acgagatcgacgagctgctgcaggagttc 1798
>emb|CR591269.1| full-length cDNA clone CS0DC023YK16 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 656 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 acgagttcgacgcgctgctgcaggagttc 378 ||||| |||||| |||||||||||||||| Sbjct: 189 acgagatcgacgagctgctgcaggagttc 217
>dbj|AK001809.1| Homo sapiens cDNA FLJ10947 fis, clone PLACE1000066, weakly similar to SSU72 PROTEIN Length = 1050 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 acgagttcgacgcgctgctgcaggagttc 378 ||||| |||||| |||||||||||||||| Sbjct: 582 acgagatcgacgagctgctgcaggagttc 610
>gb|AF161530.1|AF161530 Homo sapiens HSPC182 mRNA, complete cds Length = 1059 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 acgagttcgacgcgctgctgcaggagttc 378 ||||| |||||| |||||||||||||||| Sbjct: 574 acgagatcgacgagctgctgcaggagttc 602
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 351 cgagttcgacgcgctgctgca 371 ||||||||||||||||||||| Sbjct: 359294 cgagttcgacgcgctgctgca 359274
>gb|AF277178.1|AF277178 Homo sapiens PNAS-120 mRNA, complete cds Length = 701 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 acgagttcgacgcgctgctgcaggagttc 378 ||||| |||||| |||||||||||||||| Sbjct: 513 acgagatcgacgagctgctgcaggagttc 541
>emb|AJ276409.1|HSA276409 Homo sapiens mRNA for hypothetical protein, clone STRAIT14513 Length = 1090 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 350 acgagttcgacgcgctgctgcaggagttc 378 ||||| |||||| |||||||||||||||| Sbjct: 622 acgagatcgacgagctgctgcaggagttc 650
>ref|XM_510686.1| PREDICTED: Pan troglodytes similar to leucine-rich repeat neuronal 6A (LOC453764), mRNA Length = 2811 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gctcaaccaggacgagttcg 358 |||||||||||||||||||| Sbjct: 1368 gctcaaccaggacgagttcg 1387
>gb|AC103597.21| Mus musculus chromosome 18, clone RP23-435G4, complete sequence Length = 221083 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 aacaagcagctcaaccagga 350 |||||||||||||||||||| Sbjct: 190548 aacaagcagctcaaccagga 190529
>ref|XM_598942.2| PREDICTED: Bos taurus similar to leucine-rich repeat neuronal 6A (LOC520694), mRNA Length = 3250 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gctcaaccaggacgagttcg 358 |||||||||||||||||||| Sbjct: 627 gctcaaccaggacgagttcg 646
>ref|XM_955921.1| Neurospora crassa OR74A hypothetical protein (NCU06699.1) partial mRNA Length = 1500 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gaagatggcgtccgccatgg 64 |||||||||||||||||||| Sbjct: 732 gaagatggcgtccgccatgg 713
>ref|XM_326984.1| Neurospora crassa OR74A hypothetical protein (NCU06699.1) partial mRNA Length = 1500 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gaagatggcgtccgccatgg 64 |||||||||||||||||||| Sbjct: 732 gaagatggcgtccgccatgg 713
>ref|NM_182511.2| Homo sapiens cerebellin 2 precursor (CBLN2), mRNA Length = 2750 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 agctctccctcctcaacccc 84 |||||||||||||||||||| Sbjct: 1913 agctctccctcctcaacccc 1932
>gb|AY324320.1| Homo sapiens leucine-rich repeat neuronal 6A (LRRN6A) mRNA, complete cds Length = 2940 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gctcaaccaggacgagttcg 358 |||||||||||||||||||| Sbjct: 307 gctcaaccaggacgagttcg 326
>gb|AC131672.3| Mus musculus chromosome UNK clone RP23-314O21, complete sequence Length = 199837 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 aacaagcagctcaaccagga 350 |||||||||||||||||||| Sbjct: 37510 aacaagcagctcaaccagga 37491
>gb|AY359074.1| Homo sapiens clone DNA81228 cerebellin-2 (UNQ1892) mRNA, complete cds Length = 2750 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 agctctccctcctcaacccc 84 |||||||||||||||||||| Sbjct: 1913 agctctccctcctcaacccc 1932
>gb|AY358284.1| Homo sapiens clone DNA33786 QVSK201 (UNQ201) mRNA, complete cds Length = 2290 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gctcaaccaggacgagttcg 358 |||||||||||||||||||| Sbjct: 287 gctcaaccaggacgagttcg 306
>gb|BC110843.1| Homo sapiens cDNA clone IMAGE:5764156, containing frame-shift errors Length = 2418 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 agctctccctcctcaacccc 84 |||||||||||||||||||| Sbjct: 1557 agctctccctcctcaacccc 1576
>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16 Length = 349737 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 acgccgcggttctacaccac 290 |||||||||||||||||||| Sbjct: 325753 acgccgcggttctacaccac 325772
>emb|BX294020.1|NC7F4 Neurospora crassa DNA linkage group V Cosmid contig 7F4 Length = 115416 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 gaagatggcgtccgccatgg 64 |||||||||||||||||||| Sbjct: 69608 gaagatggcgtccgccatgg 69627
>emb|AL834260.1|HSM805292 Homo sapiens mRNA; cDNA DKFZp761I217 (from clone DKFZp761I217) Length = 2771 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gctcaaccaggacgagttcg 358 |||||||||||||||||||| Sbjct: 127 gctcaaccaggacgagttcg 146
>gb|AC110607.7| Homo sapiens chromosome 15, clone CTD-2632K10, complete sequence Length = 160452 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gctcaaccaggacgagttcg 358 |||||||||||||||||||| Sbjct: 148456 gctcaaccaggacgagttcg 148475
>gb|BC035789.1| Homo sapiens cerebellin 2 precursor, mRNA (cDNA clone MGC:46273 IMAGE:5727802), complete cds Length = 2423 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 agctctccctcctcaacccc 84 |||||||||||||||||||| Sbjct: 1575 agctctccctcctcaacccc 1594
>gb|BC068558.1| Homo sapiens leucine rich repeat neuronal 6A, mRNA (cDNA clone MGC:87481 IMAGE:4797856), complete cds Length = 2676 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gctcaaccaggacgagttcg 358 |||||||||||||||||||| Sbjct: 680 gctcaaccaggacgagttcg 699
>emb|CR857914.1| Pongo pygmaeus mRNA; cDNA DKFZp459P0736 (from clone DKFZp459P0736) Length = 2660 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gctcaaccaggacgagttcg 358 |||||||||||||||||||| Sbjct: 669 gctcaaccaggacgagttcg 688
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 acgccgcggttctacaccac 290 |||||||||||||||||||| Sbjct: 1439066 acgccgcggttctacaccac 1439085
>dbj|AK125422.1| Homo sapiens cDNA FLJ43433 fis, clone OCBBF2027868, highly similar to CERL_RAT Cerebellin-like glycoprotein Length = 3336 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 agctctccctcctcaacccc 84 |||||||||||||||||||| Sbjct: 2519 agctctccctcctcaacccc 2538
>gb|AC046168.12| Homo sapiens chromosome 15, clone RP11-307C19, complete sequence Length = 180484 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 gctcaaccaggacgagttcg 358 |||||||||||||||||||| Sbjct: 129092 gctcaaccaggacgagttcg 129073
>ref|XM_692614.1| PREDICTED: Danio rerio similar to FYVE-finger-containing Rab5 effector protein rabenosyn-5 (LOC569240), partial mRNA Length = 1953 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ccaggacgagttcgacgcgc 364 |||||||||||||||||||| Sbjct: 1080 ccaggacgagttcgacgcgc 1099
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 5.5 Identities = 38/44 (86%) Strand = Plus / Minus Query: 265 ctgctcacgccgcggttctacaccacggacttcgacgagatgga 308 ||||| || ||||| ||||||||||| || ||||| |||||||| Sbjct: 142810 ctgctgaccccgcgcttctacaccaccgatttcgatgagatgga 142767
>gb|AC011208.5|AC011208 Homo sapiens chromosome 18, clone RP11-131K21, complete sequence Length = 181602 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 agctctccctcctcaacccc 84 |||||||||||||||||||| Sbjct: 93426 agctctccctcctcaacccc 93445
>emb|BX829920.1|CNS0A1DU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB46ZB02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1683 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ggaagatggcgtccgccatg 63 |||||||||||||||||||| Sbjct: 1402 ggaagatggcgtccgccatg 1421
>emb|BX831324.1|CNS0A0NQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS78ZE12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1705 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 ggaagatggcgtccgccatg 63 |||||||||||||||||||| Sbjct: 1405 ggaagatggcgtccgccatg 1424
>dbj|AB046639.1| Macaca fascicularis brain cDNA, clone QccE-15489, similar to human leucine rich repeat neuronal 6A, mRNA, BC068558 Length = 2621 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gctcaaccaggacgagttcg 358 |||||||||||||||||||| Sbjct: 680 gctcaaccaggacgagttcg 699
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 344 accaggacgagttcgacgcg 363 |||||||||||||||||||| Sbjct: 3308444 accaggacgagttcgacgcg 3308463
>dbj|AK110370.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-165-B09, full insert sequence Length = 3020 Score = 40.1 bits (20), Expect = 5.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 280 ttctacaccacggacttcgacgagatggagcagctcttca 319 |||||||| || ||||| || |||||||||||||| |||| Sbjct: 336 ttctacacaactgactttgatgagatggagcagctgttca 375
>ref|XM_310992.2| Anopheles gambiae str. PEST ENSANGP00000008121 (ENSANGG00000006129), partial mRNA Length = 2265 Score = 40.1 bits (20), Expect = 5.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 334 aagcagctcaaccaggacgagttcgacgcgctgctgcagg 373 ||||||||| || ||||||| |||||| ||||||||||| Sbjct: 814 aagcagctcgactgggacgagatcgacgagctgctgcagg 853
>emb|AJ332530.1|HSA332530 Homo sapiens genomic sequence surrounding NotI site, clone NR5-KO6R Length = 860 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gctctccctcctcaaccccg 85 |||||||||||||||||||| Sbjct: 216 gctctccctcctcaaccccg 197
>gb|BC011057.1| Homo sapiens leucine rich repeat neuronal 6A, mRNA (cDNA clone MGC:17422 IMAGE:4214343), complete cds Length = 2286 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gctcaaccaggacgagttcg 358 |||||||||||||||||||| Sbjct: 307 gctcaaccaggacgagttcg 326
>emb|AL079343.4|CNS00M8T Human chromosome 14 DNA sequence BAC R-483C6 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 173480 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 65 agctctccctcctcaacccc 84 |||||||||||||||||||| Sbjct: 140223 agctctccctcctcaacccc 140204
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 5.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 349 gacgagttcgacgcgctgctgcag 372 |||||||||| ||||||||||||| Sbjct: 317959 gacgagttcgccgcgctgctgcag 317982
>ref|NM_032808.5| Homo sapiens leucine rich repeat neuronal 6A (LRRN6A), mRNA Length = 2932 Score = 40.1 bits (20), Expect = 5.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 339 gctcaaccaggacgagttcg 358 |||||||||||||||||||| Sbjct: 307 gctcaaccaggacgagttcg 326 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,569,620 Number of Sequences: 3902068 Number of extensions: 2569620 Number of successful extensions: 235724 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 235001 Number of HSP's gapped (non-prelim): 716 length of query: 411 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 389 effective length of database: 17,147,199,772 effective search space: 6670260711308 effective search space used: 6670260711308 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)