>ACSA_STRCO (Q9X928) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA|
           ligase) (Acyl-activating enzyme)
          Length = 651

 Score = 32.7 bits (73), Expect = 0.51
 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
 Frame = +1

Query: 268 ESKAVGALD-TTG----AFSVPLATDLHGADCVAQLHSAASNTPCPGQEPSKIVPVSE 426
           E+  VGA D TTG    AF +   T     D VA+L +    T  P  +P +I+PVSE
Sbjct: 545 EAAVVGATDETTGQAIVAFVILRGTTAESEDLVAELRNHVGATLGPIAKPKRILPVSE 602

>SOX10_CHICK (Q9W757) Transcription factor SOX-10 (cSOX10)|
          Length = 461

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 17/47 (36%), Positives = 22/47 (46%)
 Frame = -2

Query: 141 GIGDGDRQQDAQDECSRSCHVCLPKMAHLEHPIPWHGSPKQPSHPTY 1
           G G+G  + +A    S   H    K AHL+H  P  GSP    HP +
Sbjct: 180 GEGEGQVEGEAGGAASIQAHY---KNAHLDHRHPGEGSPMSDGHPEH 223

>CAC1A_RABIT (P27884) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2424

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
 Frame = +3

Query: 186  HKEEHQGRGNLQRSPGGDQVQEHRWP---VREQSGGCPGYHRCLQRAPGH*PPRRRLCRS 356
            H   H GRG  + SPG    +  R P   VR        + R   RAP    P  RL R+
Sbjct: 2223 HHHHHPGRGPGRVSPGVSARRRRRGPVARVRPARAPALAHARARARAPARLLPELRLRRA 2282

Query: 357  APQRRLQHAVPR 392
               R  Q   PR
Sbjct: 2283 RRPRPRQRRRPR 2294

>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein|
          Length = 1509

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +1

Query: 364 SAASNTPCPGQEPSKIVPVSEGTTFGIVAGDKTATPSAA 480
           S   + P P Q+P+   PV++G   G  A D  A+P+ A
Sbjct: 670 SVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPAPA 708

>RBM15_HUMAN (Q96T37) Putative RNA-binding protein 15 (RNA-binding motif protein|
           15) (One-twenty two protein)
          Length = 977

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 20/54 (37%), Positives = 27/54 (50%)
 Frame = +3

Query: 207 RGNLQRSPGGDQVQEHRWPVREQSGGCPGYHRCLQRAPGH*PPRRRLCRSAPQR 368
           RG+       DQ ++ R P  E+SGG     R L R+P    PR+R C  +P R
Sbjct: 627 RGDRDLPSSRDQPRKRRLP--EESGG-----RHLDRSPESDRPRKRHCAPSPDR 673

>K1683_HUMAN (Q9H0B3) Protein KIAA1683|
          Length = 1180

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 20/83 (24%), Positives = 37/83 (44%)
 Frame = -3

Query: 338 PWRSVARGTLKAPVVSRAPTALLSYWPSMFLHLIATWRPLKVSSALMFFLVQSAHLARPT 159
           P ++    T+      R+P  +    P   L  + T  P ++ S     ++++  LA PT
Sbjct: 467 PLQTCLSATMSKTSSQRSPVGVTKPSPQTRLPAMITKTPAQLRSVAT--ILKTLCLASPT 524

Query: 158 TTDVASALATAIASRTPRTSALV 90
             +V +    A+A+ TP TS  +
Sbjct: 525 VANVKAPPQVAVAAGTPNTSGSI 547

>DLGP3_RAT (P97838) Disks large-associated protein 3 (DAP-3)|
           (SAP90/PSD-95-associated protein 3) (SAPAP3)
           (PSD-95/SAP90-binding protein 3)
          Length = 977

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
 Frame = +1

Query: 211 ETFNGLQVAIKCKNIDGQYESKAVGALDTTGAFSVPLATDLHGA--------DCVAQLHS 366
           E FN  Q+   C ++ G+ ES+AV ALD  G F +   + L           DC+  L +
Sbjct: 463 EEFNQ-QLEAVCGSVFGELESQAVDALDLPGCFRMRSHSYLRAIQAGCSQDDDCLPLLAA 521

Query: 367 AASNTPCPG 393
            AS +  PG
Sbjct: 522 PASVSGRPG 530

>DLGP3_MOUSE (Q6PFD5) Disks large-associated protein 3 (DAP-3)|
           (SAP90/PSD-95-associated protein 3) (SAPAP3)
           (PSD-95/SAP90-binding protein 3)
          Length = 977

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
 Frame = +1

Query: 211 ETFNGLQVAIKCKNIDGQYESKAVGALDTTGAFSVPLATDLHGA--------DCVAQLHS 366
           E FN  Q+   C ++ G+ ES+AV ALD  G F +   + L           DC+  L +
Sbjct: 463 EEFNQ-QLEAVCGSVFGELESQAVDALDLPGCFRMRSHSYLRAIQAGCSQDDDCLPLLAA 521

Query: 367 AASNTPCPG 393
            AS +  PG
Sbjct: 522 PASVSGRPG 530

>GSPB_DICD3 (Q01563) General secretion pathway protein B|
          Length = 220

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 20/73 (27%), Positives = 32/73 (43%)
 Frame = -3

Query: 479 AADGVAVLSPATMPKVVPSETGTILDGSWPGHGVLEAALWS*ATQSAPWRSVARGTLKAP 300
           +    A+ +P T   +VP+ T    D + PG   L AA  + ATQ+A   S    + +  
Sbjct: 49  STSAAAIAAPPTKVGMVPASTAVTADENHPGS--LHAAAENSATQTAASGSQTSASSQEA 106

Query: 299 VVSRAPTALLSYW 261
                P  L++ W
Sbjct: 107 TPDTKPAKLVTGW 119

>CHS2_USTMA (P30599) Chitin synthase 2 (EC 2.4.1.16) (Chitin-UDP|
           acetyl-glucosaminyl transferase 2)
          Length = 1074

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 18/68 (26%), Positives = 25/68 (36%)
 Frame = -2

Query: 207 GLDVLPCAVGALGQADDDGRCLGIGDGDRQQDAQDECSRSCHVCLPKMAHLEHPIPWHGS 28
           G+  +P  + A  Q  D  + L        QDA    S S H   P   +  HP  W  +
Sbjct: 90  GIPPVPSNLSAARQRSDPSQALPPSSSSYAQDAFSRPSYSSHRNAPNAPNSNHPSRWDPN 149

Query: 27  PKQPSHPT 4
               + PT
Sbjct: 150 ASYDTAPT 157

>YQT1_CAEEL (Q09313) Hypothetical protein F25B5.1|
          Length = 923

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 17/37 (45%), Positives = 19/37 (51%)
 Frame = -2

Query: 180 GALGQADDDGRCLGIGDGDRQQDAQDECSRSCHVCLP 70
           GAL +  DDGR L    GD +     E  RS H CLP
Sbjct: 30  GALFRHQDDGRLLSGCGGDIEVIHALELERSQHTCLP 66

>CLAP2_HUMAN (O75122) CLIP-associating protein 2 (Cytoplasmic linker-associated|
            protein 2)
          Length = 1294

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 16/53 (30%), Positives = 22/53 (41%)
 Frame = -2

Query: 159  DDGRCLGIGDGDRQQDAQDECSRSCHVCLPKMAHLEHPIPWHGSPKQPSHPTY 1
            DDG  +  G G     A  + + S    L   A L H +P H SP+   +  Y
Sbjct: 970  DDGDSMCGGPGMSDPRAGGDATDSSQTALDNKASLLHSMPTHSSPRSRDYNPY 1022

>UBP26_HUMAN (Q9BXU7) Ubiquitin carboxyl-terminal hydrolase 26 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 26)
           (Ubiquitin-specific-processing protease 26)
           (Deubiquitinating enzyme 26)
          Length = 913

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +3

Query: 342 RLCRSAPQRRLQHAVPRPGT 401
           R+C  APQ+ L  + P+PGT
Sbjct: 746 RICEQAPQQALPQSFPKPGT 765

>COQ2_YEAST (P32378) Para-hydroxybenzoate--polyprenyltransferase, mitochondrial|
           precursor (EC 2.5.1.-) (PHB:polyprenyltransferase)
          Length = 372

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 20/70 (28%), Positives = 35/70 (50%)
 Frame = -3

Query: 278 ALLSYWPSMFLHLIATWRPLKVSSALMFFLVQSAHLARPTTTDVASALATAIASRTPRTS 99
           ALL + P+M +    T  PL +SS L      + +  +    D+ + + +   +  PRT 
Sbjct: 229 ALLGF-PAMGVMSWPTMIPLYLSSYLWCMTYDTIYAHQDKKFDIKAGIKSTALAWGPRTK 287

Query: 98  ALVAAMSAYQ 69
           +++ AMSA Q
Sbjct: 288 SIMKAMSASQ 297

>RNH22_SYMTH (Q67MS9) Ribonuclease HII 2 (EC 3.1.26.4) (RNase HII 2)|
          Length = 211

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 16/57 (28%), Positives = 23/57 (40%)
 Frame = -3

Query: 191 LVQSAHLARPTTTDVASALATAIASRTPRTSALVAAMSAYQKWPTWSTRFRGTAHRS 21
           ++Q+   A     + A A+A A   RT   + LV        WP W     G  H+S
Sbjct: 88  ILQATFEAMAQAVEGARAMAAARPGRTAEAALLVDGNRPLPLWPGWQRTVVGGDHKS 144


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,281,286
Number of Sequences: 219361
Number of extensions: 1537000
Number of successful extensions: 5571
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5569
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)