>FENR1_ORYSA (P41344) Ferredoxin--NADP reductase, leaf isozyme, chloroplast|
           precursor (EC 1.18.1.2) (FNR)
          Length = 362

 Score =  122 bits (306), Expect = 5e-28
 Identities = 60/104 (57%), Positives = 69/104 (66%), Gaps = 5/104 (4%)
 Frame = +3

Query: 177 SHCSFPSAARTAVSRRGALAIRAQAISTDAA-----PXXXXXXXXXXXXXXXTNTFRPKE 341
           +HC  P   RT  + +  L +RAQ  +TDAA     P               TN +RPKE
Sbjct: 25  AHCFLPCPPRTRAAHQRGLLLRAQVSTTDAAAVAAAPAKKEKISKKHDEGVVTNKYRPKE 84

Query: 342 PYVGKCLLNTKITADDAPGETWHMVFSTEGAVPYKEGQSIGVVA 473
           PYVGKCLLNTKITADDAPGETWHMVFSTEG +PY+EGQSIGV+A
Sbjct: 85  PYVGKCLLNTKITADDAPGETWHMVFSTEGEIPYREGQSIGVIA 128

>FENR1_TOBAC (O04977) Ferredoxin--NADP reductase, leaf-type isozyme, chloroplast|
           precursor (EC 1.18.1.2) (FNR)
          Length = 362

 Score =  105 bits (262), Expect = 6e-23
 Identities = 52/81 (64%), Positives = 57/81 (70%)
 Frame = +3

Query: 231 LAIRAQAISTDAAPXXXXXXXXXXXXXXXTNTFRPKEPYVGKCLLNTKITADDAPGETWH 410
           ++IRAQ   T  AP                N FRPKEPYVG+CLLNTKIT DDAPGETWH
Sbjct: 50  VSIRAQV--TTEAPAKVEKISKKQDEGVIVNKFRPKEPYVGRCLLNTKITGDDAPGETWH 107

Query: 411 MVFSTEGAVPYKEGQSIGVVA 473
           MVFSTEG VPY+EGQSIGV+A
Sbjct: 108 MVFSTEGEVPYREGQSIGVIA 128

>FENR1_PEA (P10933) Ferredoxin--NADP reductase, leaf isozyme, chloroplast|
           precursor (EC 1.18.1.2) (FNR)
          Length = 360

 Score =  102 bits (253), Expect = 7e-22
 Identities = 50/78 (64%), Positives = 54/78 (69%)
 Frame = +3

Query: 237 IRAQAISTDAAPXXXXXXXXXXXXXXXTNTFRPKEPYVGKCLLNTKITADDAPGETWHMV 416
           IRAQ   T  AP                N F+PKEPYVG+CLLNTKIT DDAPGETWHMV
Sbjct: 50  IRAQV--TTEAPAKVVKHSKKQDENIVVNKFKPKEPYVGRCLLNTKITGDDAPGETWHMV 107

Query: 417 FSTEGAVPYKEGQSIGVV 470
           FSTEG VPY+EGQSIG+V
Sbjct: 108 FSTEGEVPYREGQSIGIV 125

>FENR_VICFA (P41346) Ferredoxin--NADP reductase, chloroplast precursor (EC|
           1.18.1.2) (FNR)
          Length = 363

 Score = 99.4 bits (246), Expect = 4e-21
 Identities = 52/96 (54%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
 Frame = +3

Query: 189 FPSAARTAVSRRGALA-IRAQAISTDAAPXXXXXXXXXXXXXXXT-NTFRPKEPYVGKCL 362
           F   +  +VS  G +  IRAQ  +   AP                 N F+PKEPYVG+CL
Sbjct: 33  FKKVSLNSVSISGRVGTIRAQITTEAEAPVTKVVKHSKKQDEGIVVNKFKPKEPYVGRCL 92

Query: 363 LNTKITADDAPGETWHMVFSTEGAVPYKEGQSIGVV 470
           LNTKIT DDAPGETWHMVF+TEG VPY+EGQSIG+V
Sbjct: 93  LNTKITGDDAPGETWHMVFTTEGEVPYREGQSIGIV 128

>FENR_SPIOL (P00455) Ferredoxin--NADP reductase, chloroplast precursor (EC|
           1.18.1.2) (FNR)
          Length = 369

 Score = 94.7 bits (234), Expect = 1e-19
 Identities = 49/91 (53%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
 Frame = +3

Query: 213 VSRRGALA-IRAQAIST----DAAPXXXXXXXXXXXXXXXTNTFRPKEPYVGKCLLNTKI 377
           VS  G +  IRAQ  S       AP                N F+PK PYVG+CLLNTKI
Sbjct: 44  VSATGKMGPIRAQIASDVEAPPPAPAKVEKHSKKMEEGITVNKFKPKTPYVGRCLLNTKI 103

Query: 378 TADDAPGETWHMVFSTEGAVPYKEGQSIGVV 470
           T DDAPGETWHMVFS EG +PY+EGQS+GV+
Sbjct: 104 TGDDAPGETWHMVFSHEGEIPYREGQSVGVI 134

>FENR_MESCR (P41343) Ferredoxin--NADP reductase, chloroplast precursor (EC|
           1.18.1.2) (FNR)
          Length = 365

 Score = 92.8 bits (229), Expect = 4e-19
 Identities = 42/78 (53%), Positives = 50/78 (64%)
 Frame = +3

Query: 237 IRAQAISTDAAPXXXXXXXXXXXXXXXTNTFRPKEPYVGKCLLNTKITADDAPGETWHMV 416
           IRA A   +A                  N ++PK PY G+CLLNTKIT DDAPGETWHMV
Sbjct: 53  IRAVASDVEAPVAKVEKHSKKMEEGVIVNKYKPKNPYTGRCLLNTKITGDDAPGETWHMV 112

Query: 417 FSTEGAVPYKEGQSIGVV 470
           FS EG +PY+EGQS+GV+
Sbjct: 113 FSHEGEIPYREGQSVGVI 130

>FENR_CYAPA (Q00598) Ferredoxin--NADP reductase, cyanelle precursor (EC|
           1.18.1.2) (FNR)
          Length = 363

 Score = 72.0 bits (175), Expect = 7e-13
 Identities = 29/50 (58%), Positives = 38/50 (76%)
 Frame = +3

Query: 321 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGAVPYKEGQSIGVV 470
           N FRP  PY+GKC+ N +I  + APGET H++F+ EG VPY EGQSIG++
Sbjct: 79  NLFRPANPYIGKCIYNERIVGEGAPGETKHIIFTHEGKVPYLEGQSIGII 128

>FENR2_ORYSA (P41345) Ferredoxin--NADP reductase, root isozyme, chloroplast|
           precursor (EC 1.18.1.2) (FNR)
          Length = 378

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 24/50 (48%), Positives = 31/50 (62%)
 Frame = +3

Query: 321 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGAVPYKEGQSIGVV 470
           NT++PKEPY    +   +I    APGET H+V    G VPY EGQS G++
Sbjct: 88  NTYKPKEPYTATIVSVERIVGPKAPGETCHIVIDHGGNVPYWEGQSYGII 137

>FENR2_PEA (Q41014) Ferredoxin--NADP reductase, root isozyme, chloroplast|
           precursor (EC 1.18.1.2) (FNR)
          Length = 377

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 23/50 (46%), Positives = 31/50 (62%)
 Frame = +3

Query: 321 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGAVPYKEGQSIGVV 470
           N  +PKEPY    +   ++    APGET H+V + +G VPY EGQS GV+
Sbjct: 87  NLHKPKEPYTATIVSVERLVGPKAPGETCHIVINHDGNVPYWEGQSYGVI 136

>FENR_SPISP (P00454) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)|
          Length = 294

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
 Frame = +3

Query: 321 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGA-VPYKEGQSIGVV 470
           N ++PK PY+GKCL N ++  +   G   H++F   G  + Y EGQSIG++
Sbjct: 8   NIYKPKNPYIGKCLSNEELVREGGTGTVRHLIFDISGGDLRYLEGQSIGII 58

>FENR2_TOBAC (O04397) Ferredoxin--NADP reductase, root-type isozyme, chloroplast|
           precursor (EC 1.18.1.2) (FNR)
          Length = 375

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 22/50 (44%), Positives = 31/50 (62%)
 Frame = +3

Query: 321 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGAVPYKEGQSIGVV 470
           N ++PKEPY    +   ++    APGET H+V   +G +PY EGQS GV+
Sbjct: 86  NIYKPKEPYTATIVSVERLVGPKAPGETCHIVIDHDGNLPYWEGQSYGVI 135

>FENR3_ORYSA (O23877) Ferredoxin--NADP reductase, embryo isozyme, chloroplast|
           precursor (EC 1.18.1.2) (FNR)
          Length = 378

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 23/50 (46%), Positives = 30/50 (60%)
 Frame = +3

Query: 321 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGAVPYKEGQSIGVV 470
           N ++PKEPY    +   ++    APGET H+V    G VPY EGQS GV+
Sbjct: 88  NLYKPKEPYTATIVSVERLVGPKAPGETCHIVIDHGGNVPYWEGQSYGVI 137

>FENR_CHLRE (P53991) Ferredoxin--NADP reductase, chloroplast precursor (EC|
           1.18.1.2) (FNR)
          Length = 354

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 23/50 (46%), Positives = 30/50 (60%)
 Frame = +3

Query: 321 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGAVPYKEGQSIGVV 470
           NT+  K P+  K     KIT   A GET H++  TEG +P+ EGQS GV+
Sbjct: 64  NTYSNKAPFKAKVRSVEKITGPKATGETCHIIIETEGKIPFWEGQSYGVI 113

>FENR_SYNP2 (P31973) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)|
          Length = 402

 Score = 48.5 bits (114), Expect = 9e-06
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
 Frame = +3

Query: 321 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFS-TEGAVPYKEGQSIGVV 470
           N +RPK P++GKC+ N ++  +   G   H+ F  +EG + Y EGQSIG++
Sbjct: 115 NIYRPKTPFLGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGII 165

>FENR_SYNY3 (Q55318) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)|
          Length = 413

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = +3

Query: 321 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFS-TEGAVPYKEGQSIGVV 470
           N +RPK PY+GK L N  +  + A G   H+ F  + G + Y EGQSIG++
Sbjct: 128 NIYRPKTPYIGKVLENYPLVREGAIGTVQHLTFDLSAGDLRYLEGQSIGII 178

>FENR_SYNEL (Q93RE3) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)|
          Length = 386

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 321 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGA-VPYKEGQSIGVV 470
           N +RP  P +GK + N ++  +   G   H++F   G  + Y EGQSIG++
Sbjct: 99  NIYRPNNPCIGKVISNEELVREGGEGTVKHIIFDISGTELRYLEGQSIGII 149

>FENR_ANAVT (Q44549) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)|
          Length = 440

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 321 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFS-TEGAVPYKEGQSIGVV 470
           N +RP  P++GK + N  +  +   G   H+ F  T G + Y EGQSIG++
Sbjct: 150 NLYRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGII 200

>FENR_ANASP (P58558) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)|
          Length = 440

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 321 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFS-TEGAVPYKEGQSIGVV 470
           N +RP  P++GK + N  +  +   G   H+ F  T G + Y EGQSIG++
Sbjct: 150 NLYRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGII 200

>FENR_ANASO (P21890) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)|
          Length = 440

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 321 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFS-TEGAVPYKEGQSIGVV 470
           N +RP  P++GK + N  +  +   G   H+ F  T G + Y EGQSIG++
Sbjct: 150 NLYRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGII 200

>CYSJ_MANSM (Q65T53) Sulfite reductase [NADPH] flavoprotein alpha-component (EC|
           1.8.1.2) (SIR-FP)
          Length = 597

 Score = 36.2 bits (82), Expect = 0.044
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +3

Query: 327 FRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGA-VPYKEGQSIGVVA 473
           +  + PY  K + N KITA D+  +  H  F   G+ + YK G ++GV A
Sbjct: 229 YSKENPYTAKLITNQKITARDSAKDVRHFEFDLSGSGLQYKAGDALGVWA 278

>CYSJ_VIBF1 (Q5E841) Sulfite reductase [NADPH] flavoprotein alpha-component (EC|
           1.8.1.2) (SIR-FP)
          Length = 604

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +3

Query: 318 TNTFRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGA-VPYKEGQSIGV 467
           T+ +  + PY    L + KIT  D+  +  H+    +G+ + Y+ G ++GV
Sbjct: 233 TSQYSKQNPYTATLLTSQKITGRDSGKDVRHIEIDLDGSGLTYQPGDALGV 283

>RM35_DROME (Q8MS27) 39S ribosomal protein L35, mitochondrial precursor (L35mt)|
          Length = 178

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 17/41 (41%), Positives = 22/41 (53%)
 Frame = -1

Query: 427 SVEKTMCHVSPGASSAVILVLSRHLPTYGSLGRNVLVTTPS 305
           S  +++C  SP ASS V LV      T  +L R  L+ TPS
Sbjct: 8   SALRSVCRQSPAASSLVPLVQRTQRATLMTLSRPCLLPTPS 48

>POLS2_MOUSE (Q5K2P8) Polyserase-2 precursor (EC 3.4.21.-) (Polyserine protease|
           2) (Protease serine 36)
          Length = 849

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -1

Query: 352 PTYGSLGRNVLVTTPSSCFLDTFFSF 275
           P YG+L  +  V  P+SCFLD+   F
Sbjct: 347 PCYGALVSDSWVLAPASCFLDSLHDF 372


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,352,503
Number of Sequences: 219361
Number of extensions: 434865
Number of successful extensions: 1305
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1297
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)