ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet113h09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT011361.1| Drosophila melanogaster RE66690 full insert cDNA 42 0.42
2ref|NM_164742.1| Drosophila melanogaster CG13784-RB, transcript ... 42 0.42
3ref|NM_135260.2| Drosophila melanogaster CG13784-RA, transcript ... 42 0.42
4gb|AY069857.1| Drosophila melanogaster SD10385 full length cDNA 42 0.42
5gb|AC012675.5|AC012675 Drosophila melanogaster, chromosome 2L, r... 42 0.42
6dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 0.42
7gb|AE003616.2| Drosophila melanogaster chromosome 2L, section 25... 42 0.42
8gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 0.42
9gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 1.7
10gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 1.7
11emb|X92556.1|SEHGTABCP S.erythraea hgtA, bcpA1, and orf122 genes 40 1.7
12gb|CP000088.1| Thermobifida fusca YX, complete genome 40 1.7
13emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete ... 40 1.7
14emb|BX640428.1| Bordetella parapertussis strain 12822, complete ... 40 1.7
15emb|BX640418.1| Bordetella pertussis strain Tohama I, complete g... 40 1.7
16emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 1.7
17emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 40 1.7
18gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 1.7
19gb|AE004461.1| Pseudomonas aeruginosa PAO1, section 22 of 529 of... 40 1.7
20emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 1.7
21dbj|AB074880.1| Chlamydomonas reinhardtii PTB1 mRNA for putative... 40 1.7
22gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence 38 6.6
23ref|XM_425681.1| PREDICTED: Gallus gallus similar to NAD(P)-argi... 38 6.6
24gb|AY456696.1| Arthrobacter aurescens strain TC1 plasmid pAA1 at... 38 6.6
25gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 38 6.6
26gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 38 6.6
27ref|XM_542147.1| PREDICTED: Canis familiaris similar to zinc and... 38 6.6
28ref|XM_538554.2| PREDICTED: Canis familiaris similar to laeverin... 38 6.6
29gb|AF325537.2| Acidithiobacillus caldus plasmid pTC-F14 replicon... 38 6.6
30gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 38 6.6
31gb|U66917.2| Pseudomonas sp. ADP atrazine catabolic plasmid pADP... 38 6.6
32emb|AL021396.8|HS971N18 Human DNA sequence from clone RP5-971N18... 38 6.6
33ref|XM_776574.1| PREDICTED: Strongylocentrotus purpuratus simila... 38 6.6
34emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete ... 38 6.6
35emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete ... 38 6.6
36emb|BX640426.1| Bordetella parapertussis strain 12822, complete ... 38 6.6
37emb|BX640419.1| Bordetella pertussis strain Tohama I, complete g... 38 6.6
38emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete ... 38 6.6
39gb|AC115458.5| Rattus norvegicus 13 BAC CH230-190J23 (Children's... 38 6.6
40gb|AE005838.1| Caulobacter crescentus CB15 section 164 of 359 of... 38 6.6
41gb|AE012330.1| Xanthomonas campestris pv. campestris str. ATCC 3... 38 6.6
42gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 38 6.6
43gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 38 6.6
44gb|AE009473.1| Brucella melitensis 16M chromosome I, section 30 ... 38 6.6
45dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 38 6.6
46gb|AE004901.1| Pseudomonas aeruginosa PAO1, section 462 of 529 o... 38 6.6
47gb|AF256214.1|AF256214 Brucella abortus phosphoglycerate kinase ... 38 6.6
48dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 38 6.6
49dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 38 6.6
50gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I... 38 6.6
51gb|AY109326.1| Zea mays CL1256_1 mRNA sequence 38 6.6
52gb|CP000009.1| Gluconobacter oxydans 621H, complete genome 38 6.6
53gb|AE015451.1| Pseudomonas putida KT2440 complete genome 38 6.6
54gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 38 6.6
55gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 38 6.6
56emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I,... 38 6.6 
>gb|BT011361.1| Drosophila melanogaster RE66690 full insert cDNA
          Length = 3816

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 97  ctggcgctgctggtggccaac 117
           |||||||||||||||||||||
Sbjct: 348 ctggcgctgctggtggccaac 368
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>ref|NM_164742.1| Drosophila melanogaster CG13784-RB, transcript variant B (CG13784),
            mRNA
          Length = 1332

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 97   ctggcgctgctggtggccaac 117
            |||||||||||||||||||||
Sbjct: 1081 ctggcgctgctggtggccaac 1101
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>ref|NM_135260.2| Drosophila melanogaster CG13784-RA, transcript variant A (CG13784),
           mRNA
          Length = 3504

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 97  ctggcgctgctggtggccaac 117
           |||||||||||||||||||||
Sbjct: 352 ctggcgctgctggtggccaac 372
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>gb|AY069857.1| Drosophila melanogaster SD10385 full length cDNA
          Length = 1323

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 97   ctggcgctgctggtggccaac 117
            |||||||||||||||||||||
Sbjct: 1055 ctggcgctgctggtggccaac 1075
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>gb|AC012675.5|AC012675 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone
              BACR10E07, complete sequence
          Length = 176818

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 97     ctggcgctgctggtggccaac 117
              |||||||||||||||||||||
Sbjct: 138389 ctggcgctgctggtggccaac 138369
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 94      ctgctggcgctgctggtggcc 114
               |||||||||||||||||||||
Sbjct: 1626414 ctgctggcgctgctggtggcc 1626434



 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 84      ggcggcctgcctgctggcgc 103
               ||||||||||||||||||||
Sbjct: 4292013 ggcggcctgcctgctggcgc 4291994



 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 81      ctcggcggcctgcctgctggcgc 103
               ||||||||||||||||| |||||
Sbjct: 2799673 ctcggcggcctgcctgcgggcgc 2799651
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>gb|AE003616.2| Drosophila melanogaster chromosome 2L, section 25 of 83 of the complete
              sequence
          Length = 267997

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 97     ctggcgctgctggtggccaac 117
              |||||||||||||||||||||
Sbjct: 191614 ctggcgctgctggtggccaac 191594
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 87      ggcctgcctgctggcgctgctggtg 111
               |||| ||||||||||||||||||||
Sbjct: 3899944 ggccggcctgctggcgctgctggtg 3899920
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                           
Query: 77      ccttctcggcggcctgcctgctggcgct 104
               |||||||||||||||||| |||||||||
Sbjct: 1386624 ccttctcggcggcctgcc-gctggcgct 1386650
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Plus

                                           
Query: 77      ccttctcggcggcctgcctgctggcgct 104
               |||||||||||||||||| |||||||||
Sbjct: 2611412 ccttctcggcggcctgcc-gctggcgct 2611438
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>emb|X92556.1|SEHGTABCP S.erythraea hgtA, bcpA1, and orf122 genes
          Length = 4120

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 79   ttctcggcggcctgcctgct 98
            ||||||||||||||||||||
Sbjct: 1272 ttctcggcggcctgcctgct 1253
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 93      cctgctggcgctgctggtgg 112
               ||||||||||||||||||||
Sbjct: 3403840 cctgctggcgctgctggtgg 3403821
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>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16
          Length = 349442

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     ggcctgcctgctggcgctgc 106
              ||||||||||||||||||||
Sbjct: 174810 ggcctgcctgctggcgctgc 174791
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>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14
          Length = 348525

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    ggcctgcctgctggcgctgc 106
             ||||||||||||||||||||
Sbjct: 63309 ggcctgcctgctggcgctgc 63328
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>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12
          Length = 349346

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    ggcctgcctgctggcgctgc 106
             ||||||||||||||||||||
Sbjct: 50412 ggcctgcctgctggcgctgc 50393
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                           
Query: 77      ccttctcggcggcctgcctgctggcgct 104
               |||||||||||||||||| |||||||||
Sbjct: 1770740 ccttctcggcggcctgcc-gctggcgct 1770714
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>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     cggcggcctgcctgctggcg 102
              ||||||||||||||||||||
Sbjct: 218752 cggcggcctgcctgctggcg 218771
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 99      ggcgctgctggtggccaaca 118
               ||||||||||||||||||||
Sbjct: 3293550 ggcgctgctggtggccaaca 3293569



 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 99     ggcgctgctggtggccaaca 118
              ||||||||||||||||||||
Sbjct: 819863 ggcgctgctggtggccaaca 819882



 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 93      cctgctggcgctgctggtg 111
               |||||||||||||||||||
Sbjct: 3486188 cctgctggcgctgctggtg 3486206
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>gb|AE004461.1| Pseudomonas aeruginosa PAO1, section 22 of 529 of the complete genome
          Length = 11266

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 91   tgcctgctggcgctgctggt 110
            ||||||||||||||||||||
Sbjct: 1330 tgcctgctggcgctgctggt 1349
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 81      ctcggcggcctgcctgctggcgctgctg 108
               |||||||||||||||| |||||| ||||
Sbjct: 2604426 ctcggcggcctgcctgatggcgcggctg 2604399



 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 96     gctggcgctgctggtggcc 114
              |||||||||||||||||||
Sbjct: 466822 gctggcgctgctggtggcc 466840
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>dbj|AB074880.1| Chlamydomonas reinhardtii PTB1 mRNA for putative Pi-transporter
           homologue B1, complete cds
          Length = 6032

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 88  gcctgcctgctggcgctgctggtggcca 115
           |||||||||||| || ||||||||||||
Sbjct: 821 gcctgcctgctgacggtgctggtggcca 848
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>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 110     tggccaacacgttccttgc 128
               |||||||||||||||||||
Sbjct: 1669534 tggccaacacgttccttgc 1669552
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>ref|XM_425681.1| PREDICTED: Gallus gallus similar to NAD(P)-arginine
           ADP-ribosyltransferase (EC 2.4.2.31) - chicken
           (LOC428124), mRNA
          Length = 1053

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 102 gctgctggtggccaacacg 120
           |||||||||||||||||||
Sbjct: 69  gctgctggtggccaacacg 51
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>gb|AY456696.1| Arthrobacter aurescens strain TC1 plasmid pAA1 atrazine catabolic
             region, partial sequence
          Length = 161264

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 86    cggcctgcctgctggcgctgctg 108
             ||||| |||||||||||||||||
Sbjct: 40500 cggccggcctgctggcgctgctg 40522
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 89      cctgcctgctggcgctgctggtg 111
               ||||||||||||||||| |||||
Sbjct: 5563210 cctgcctgctggcgctggtggtg 5563188
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 93     cctgctggcgctgctggtg 111
              |||||||||||||||||||
Sbjct: 547364 cctgctggcgctgctggtg 547346
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>ref|XM_542147.1| PREDICTED: Canis familiaris similar to zinc and ring finger 4
           (LOC485029), mRNA
          Length = 1092

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 93  cctgctggcgctgctggtg 111
           |||||||||||||||||||
Sbjct: 54  cctgctggcgctgctggtg 72
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>ref|XM_538554.2| PREDICTED: Canis familiaris similar to laeverin (LOC481434), mRNA
          Length = 2979

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 93  cctgctggcgctgctggtg 111
           |||||||||||||||||||
Sbjct: 78  cctgctggcgctgctggtg 96
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>gb|AF325537.2| Acidithiobacillus caldus plasmid pTC-F14 replicon, complete sequence
          Length = 14155

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 72   caggaccttctcggcggcctgcc 94
            |||| ||||||||||||||||||
Sbjct: 4750 cagggccttctcggcggcctgcc 4728
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 92     gcctgctggcgctgctggt 110
              |||||||||||||||||||
Sbjct: 235452 gcctgctggcgctgctggt 235434
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>gb|U66917.2| Pseudomonas sp. ADP atrazine catabolic plasmid pADP-1, complete
             sequence
          Length = 108845

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 86    cggcctgcctgctggcgctgctg 108
             ||||| |||||||||||||||||
Sbjct: 63293 cggccggcctgctggcgctgctg 63271
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>emb|AL021396.8|HS971N18 Human DNA sequence from clone RP5-971N18 on chromosome 20p12 Contains
             the PHKBP1 pseudogene (phosphorylase kinase, beta
             pseudogene 1), two novel genes and a CpG island, complete
             sequence
          Length = 125729

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 2     ctaaaccctcctacctcactctc 24
             |||||||| ||||||||||||||
Sbjct: 83160 ctaaacccacctacctcactctc 83138
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>ref|XM_776574.1| PREDICTED: Strongylocentrotus purpuratus similar to Disheveled
           associated activator of morphogenesis 1 (LOC576249),
           partial mRNA
          Length = 537

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 64  atggcgtccaggaccttct 82
           |||||||||||||||||||
Sbjct: 494 atggcgtccaggaccttct 476
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>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 96     gctggcgctgctggtggccaaca 118
              ||||||||||||| |||||||||
Sbjct: 122144 gctggcgctgctgctggccaaca 122122
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>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16
          Length = 349497

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 88     gcctgcctgctggcgctgc 106
              |||||||||||||||||||
Sbjct: 312759 gcctgcctgctggcgctgc 312741
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>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14
          Length = 348866

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 88    gcctgcctgctggcgctgc 106
             |||||||||||||||||||
Sbjct: 76550 gcctgcctgctggcgctgc 76532
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>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12
          Length = 349672

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 83     cggcggcctgcctgctggcgctg 105
              |||||||| ||||||||||||||
Sbjct: 235847 cggcggccggcctgctggcgctg 235869
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>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29
          Length = 311000

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 95     tgctggcgctgctggtggc 113
              |||||||||||||||||||
Sbjct: 101089 tgctggcgctgctggtggc 101071
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>gb|AC115458.5| Rattus norvegicus 13 BAC CH230-190J23 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 69404

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 4    aaaccctcctacctcactc 22
            |||||||||||||||||||
Sbjct: 1702 aaaccctcctacctcactc 1684
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>gb|AE005838.1| Caulobacter crescentus CB15 section 164 of 359 of the complete genome
          Length = 9979

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 83   cggcggcctgcctgctggcgctg 105
            |||||| ||||||||||||||||
Sbjct: 6178 cggcggtctgcctgctggcgctg 6200
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>gb|AE012330.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 238
            of 460 of the complete genome
          Length = 12695

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 95   tgctggcgctgctggtggc 113
            |||||||||||||||||||
Sbjct: 3069 tgctggcgctgctggtggc 3087
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 110     tggccaacacgttccttgc 128
               |||||||||||||||||||
Sbjct: 2083595 tggccaacacgttccttgc 2083577
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 95      tgctggcgctgctggtggc 113
               |||||||||||||||||||
Sbjct: 2291173 tgctggcgctgctggtggc 2291155
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>gb|AE009473.1| Brucella melitensis 16M chromosome I, section 30 of 195 of the
            complete sequence
          Length = 10006

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 110  tggccaacacgttccttgc 128
            |||||||||||||||||||
Sbjct: 4643 tggccaacacgttccttgc 4625
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 88      gcctgcctgctggcgctgc 106
               |||||||||||||||||||
Sbjct: 2518907 gcctgcctgctggcgctgc 2518889
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>gb|AE004901.1| Pseudomonas aeruginosa PAO1, section 462 of 529 of the complete
            genome
          Length = 12399

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 83   cggcggcctgcctgctggcgctg 105
            |||||||| ||||||||||||||
Sbjct: 3184 cggcggccagcctgctggcgctg 3162
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>gb|AF256214.1|AF256214 Brucella abortus phosphoglycerate kinase (pgk) gene, complete cds
          Length = 1191

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 110 tggccaacacgttccttgc 128
           |||||||||||||||||||
Sbjct: 662 tggccaacacgttccttgc 680
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 94      ctgctggcgctgctggtgg 112
               |||||||||||||||||||
Sbjct: 4999333 ctgctggcgctgctggtgg 4999351
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 93      cctgctggcgctgctggtggcca 115
               |||||||| ||||||||||||||
Sbjct: 1177782 cctgctggtgctgctggtggcca 1177804
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>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 110     tggccaacacgttccttgc 128
               |||||||||||||||||||
Sbjct: 1686457 tggccaacacgttccttgc 1686475
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>gb|AY109326.1| Zea mays CL1256_1 mRNA sequence
          Length = 2360

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 71  ccaggaccttctcggcggcctgc 93
           ||||||||||||| |||||||||
Sbjct: 79  ccaggaccttctccgcggcctgc 101
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>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 110    tggccaacacgttccttgc 128
              |||||||||||||||||||
Sbjct: 530537 tggccaacacgttccttgc 530519
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                          
Query: 98      tggcgctgctggtggccaacacgttcc 124
               ||||||||||||||| |||||| ||||
Sbjct: 1341901 tggcgctgctggtgggcaacaccttcc 1341875
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 78      cttctcggcggcctgcctgctgg 100
               ||||||||||||| |||||||||
Sbjct: 3736073 cttctcggcggccggcctgctgg 3736051



 Score = 38.2 bits (19), Expect = 6.6
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                              
Query: 83      cggcggcctgcctgctggcgctgctggtggc 113
               |||||||||| | ||||||||||||| ||||
Sbjct: 2544344 cggcggcctggccgctggcgctgctgctggc 2544374



 Score = 38.2 bits (19), Expect = 6.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 92      gcctgctggcgctgctggtggcc 114
               ||||||||||||||||| |||||
Sbjct: 2421887 gcctgctggcgctgctgctggcc 2421865
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 91      tgcctgctggcgctgctgg 109
               |||||||||||||||||||
Sbjct: 1666913 tgcctgctggcgctgctgg 1666931
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>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain
               2308
          Length = 2121359

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 110     tggccaacacgttccttgc 128
               |||||||||||||||||||
Sbjct: 1683614 tggccaacacgttccttgc 1683632


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,028,818
Number of Sequences: 3902068
Number of extensions: 1028818
Number of successful extensions: 85038
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 81537
Number of HSP's gapped (non-prelim): 3504
length of query: 139
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 118
effective length of database: 17,151,101,840
effective search space: 2023830017120
effective search space used: 2023830017120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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