>FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan protein 1 precursor|
          Length = 424

 Score =  110 bits (274), Expect = 2e-24
 Identities = 51/94 (54%), Positives = 66/94 (70%)
 Frame = +1

Query: 145 NITAAMAKGGCKAFAALVAASPDAHSTFQSAGDGGVTAFCPSDDAVRSFMPRYKNLTADG 324
           N+T  M+  GCK FA  +  +P A  T+Q + +GG+T FCP DDA++ F+P+YKNLTA  
Sbjct: 186 NLTGIMSAHGCKVFAETLLTNPGASKTYQESLEGGMTVFCPGDDAMKGFLPKYKNLTAPK 245

Query: 325 KASLLLFHAVPVYYAPRSLKSNNGVMNTLATDGS 426
           K + L F AVP YY+   LKSNNG MNTLATDG+
Sbjct: 246 KEAFLDFLAVPTYYSMAMLKSNNGPMNTLATDGA 279

>FLA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10 precursor|
          Length = 422

 Score = 70.9 bits (172), Expect = 1e-12
 Identities = 41/96 (42%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
 Frame = +1

Query: 145 NITAAMAKGGCKAFAALVAASPDAHSTFQSAGDGGVTAFCPSDDAVRSF-MPRYKNLTAD 321
           NIT  + K GCK FA L+ +S     TF+S  + G+T F PSD+A ++  +P   NLT  
Sbjct: 190 NITGLLEKAGCKTFANLLVSS-GVIKTFESTVEKGLTVFAPSDEAFKARGVPDLTNLTQA 248

Query: 322 GKASLLLFHAVPVYYAPRSLKSNNGVMNTLATDGSG 429
              SLL +HA+  Y    SLK+N   ++TLAT+G+G
Sbjct: 249 EVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAG 284

>FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 precursor|
           (AtAGP8)
          Length = 420

 Score = 68.2 bits (165), Expect = 8e-12
 Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
 Frame = +1

Query: 145 NITAAMAKGGCKAFAALVAASPDAHSTFQSAGDGGVTAFCPSDDAVRSF-MPRYKNLTAD 321
           NIT  + K GCK FA L+ +S     T++SA + G+T F PSD+A ++  +P    LT  
Sbjct: 189 NITGLLEKAGCKTFANLLVSS-GVLKTYESAVEKGLTVFAPSDEAFKAEGVPDLTKLTQA 247

Query: 322 GKASLLLFHAVPVYYAPRSLKSNNGVMNTLATDGSG 429
              SLL +HA+  Y    SLK+N   ++TLAT+G+G
Sbjct: 248 EVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAG 283

>FLA7_ARATH (Q9SJ81) Fasciclin-like arabinogalactan protein 7 precursor|
          Length = 254

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
 Frame = +1

Query: 223 TFQSAGDG---GVTAFCPSDDAVRSFM-PRYKNLTADGKASLLLFHAVPVYYAPRSLK-- 384
           TFQ+  +    G+T F P DDA ++   P   NLT D    L+LFHA+P YY+    K  
Sbjct: 72  TFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHALPHYYSLSEFKNL 131

Query: 385 SNNGVMNTLA 414
           S +G ++T A
Sbjct: 132 SQSGPVSTFA 141

>BGH3_HUMAN (Q15582) Transforming growth factor-beta-induced protein ig-h3|
           precursor (Beta ig-h3) (Kerato-epithelin)
           (RGD-containing collagen-associated protein) (RGD-CAP)
          Length = 683

 Score = 32.0 bits (71), Expect = 0.65
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
 Frame = +1

Query: 172 GCKAFAALVAASPDAHSTFQSAGDGGVTAFCPSDDAVRSFMPRYKN-LTADGK--ASLLL 342
           G   F+ LVAA   A  T     +G  T F P+++A R+  PR ++ L  D K  A++L 
Sbjct: 511 GDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILK 570

Query: 343 FH 348
           +H
Sbjct: 571 YH 572

>NIR_RHIGA (Q01537) Copper-containing nitrite reductase precursor (EC 1.7.2.1)|
           (Cu-NIR)
          Length = 379

 Score = 32.0 bits (71), Expect = 0.65
 Identities = 22/72 (30%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
 Frame = +1

Query: 211 DAHSTFQSAGDGGVTAFCPSDDAVRSFMPRYKNLTADGKASLLLFHAVPVYYAPRSLKSN 390
           D HS   + G G +T   P D AV  F           KA + ++H  P    P  + S 
Sbjct: 137 DFHSATGALGGGALTVVNPGDTAVLRFKAT--------KAGVFVYHCAPAGMVPWHVTSG 188

Query: 391 -NGVMNTLATDG 423
            NG +  L  DG
Sbjct: 189 MNGAIMVLPRDG 200

>YH35_SYNP2 (O33752) Hypothetical protein sll1735 homolog|
          Length = 133

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +1

Query: 178 KAFAALVAASPDAHSTFQSAGDGGVTAFCPSDDAVRSFMP 297
           + F+ LVAA   A      AG+G  T F P+DDA     P
Sbjct: 12  EGFSTLVAAVQAAGLVETLAGEGDFTVFAPNDDAFAKLPP 51

>NIRK_RHIME (Q92Z29) Copper-containing nitrite reductase precursor (EC 1.7.2.1)|
           (Cu-NIR)
          Length = 376

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 5/78 (6%)
 Frame = +1

Query: 211 DAHSTFQSAGDGGVTAFCPSDDAVRSFMPRYKNLTADGKASLLLFHAVPVYYAPRSLKSN 390
           D HS   + G G +T   P D  V  F           KA + ++H  P    P  + S 
Sbjct: 134 DFHSATGALGGGALTVVNPGDTTVLRFKA--------SKAGVFVYHCAPPGMVPWHVTSG 185

Query: 391 -NGVMNTL----ATDGSG 429
            NG +  L     TDG G
Sbjct: 186 MNGAIMVLPREGLTDGKG 203

>PURL_PYRHO (O59621) Phosphoribosylformylglycinamidine synthase II (EC 6.3.5.3)|
           (FGAM synthase II)
          Length = 705

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -3

Query: 405 VHDAVVGLEAPRRVVHGHGVEQQQRRLAVGGEVLVPGHEGPHGVVAGAE 259
           V+ A VG+  P  +VH +  E   + + VG      G +G HGV   +E
Sbjct: 164 VNVACVGIMKPEHLVHSYVTEPGLKLIIVGNRT---GRDGIHGVTFASE 209


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,205,610
Number of Sequences: 219361
Number of extensions: 553744
Number of successful extensions: 2131
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2124
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)