ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baet113h05 |
|---|---|
| Clone Library Name | barley_pub |
>FENR1_ORYSA (P41344) Ferredoxin--NADP reductase, leaf isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 362 Score = 106 bits (265), Expect = 2e-23 Identities = 52/95 (54%), Positives = 60/95 (63%), Gaps = 5/95 (5%) Frame = +2 Query: 164 SHCSFPSAARTAVSRRGALAIRAQAISTDAA-----PXXXXXXXXXXXXXXXTNTFRPKE 328 +HC P RT + + L +RAQ +TDAA P TN +RPKE Sbjct: 25 AHCFLPCPPRTRAAHQRGLLLRAQVSTTDAAAVAAAPAKKEKISKKHDEGVVTNKYRPKE 84 Query: 329 PYVGKCLLNTKITADDAPGETWHMVFSTEGAVPYK 433 PYVGKCLLNTKITADDAPGETWHMVFSTEG +PY+ Sbjct: 85 PYVGKCLLNTKITADDAPGETWHMVFSTEGEIPYR 119
>FENR1_TOBAC (O04977) Ferredoxin--NADP reductase, leaf-type isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 362 Score = 89.7 bits (221), Expect = 3e-18 Identities = 44/72 (61%), Positives = 48/72 (66%) Frame = +2 Query: 218 LAIRAQAISTDAAPXXXXXXXXXXXXXXXTNTFRPKEPYVGKCLLNTKITADDAPGETWH 397 ++IRAQ T AP N FRPKEPYVG+CLLNTKIT DDAPGETWH Sbjct: 50 VSIRAQV--TTEAPAKVEKISKKQDEGVIVNKFRPKEPYVGRCLLNTKITGDDAPGETWH 107 Query: 398 MVFSTEGAVPYK 433 MVFSTEG VPY+ Sbjct: 108 MVFSTEGEVPYR 119
>FENR1_PEA (P10933) Ferredoxin--NADP reductase, leaf isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 360 Score = 87.8 bits (216), Expect = 1e-17 Identities = 43/70 (61%), Positives = 46/70 (65%) Frame = +2 Query: 224 IRAQAISTDAAPXXXXXXXXXXXXXXXTNTFRPKEPYVGKCLLNTKITADDAPGETWHMV 403 IRAQ T AP N F+PKEPYVG+CLLNTKIT DDAPGETWHMV Sbjct: 50 IRAQV--TTEAPAKVVKHSKKQDENIVVNKFKPKEPYVGRCLLNTKITGDDAPGETWHMV 107 Query: 404 FSTEGAVPYK 433 FSTEG VPY+ Sbjct: 108 FSTEGEVPYR 117
>FENR_VICFA (P41346) Ferredoxin--NADP reductase, chloroplast precursor (EC| 1.18.1.2) (FNR) Length = 363 Score = 85.1 bits (209), Expect = 7e-17 Identities = 45/88 (51%), Positives = 53/88 (60%), Gaps = 2/88 (2%) Frame = +2 Query: 176 FPSAARTAVSRRGALA-IRAQAISTDAAPXXXXXXXXXXXXXXXT-NTFRPKEPYVGKCL 349 F + +VS G + IRAQ + AP N F+PKEPYVG+CL Sbjct: 33 FKKVSLNSVSISGRVGTIRAQITTEAEAPVTKVVKHSKKQDEGIVVNKFKPKEPYVGRCL 92 Query: 350 LNTKITADDAPGETWHMVFSTEGAVPYK 433 LNTKIT DDAPGETWHMVF+TEG VPY+ Sbjct: 93 LNTKITGDDAPGETWHMVFTTEGEVPYR 120
>FENR_SPIOL (P00455) Ferredoxin--NADP reductase, chloroplast precursor (EC| 1.18.1.2) (FNR) Length = 369 Score = 80.9 bits (198), Expect = 1e-15 Identities = 43/83 (51%), Positives = 48/83 (57%), Gaps = 5/83 (6%) Frame = +2 Query: 200 VSRRGALA-IRAQAIST----DAAPXXXXXXXXXXXXXXXTNTFRPKEPYVGKCLLNTKI 364 VS G + IRAQ S AP N F+PK PYVG+CLLNTKI Sbjct: 44 VSATGKMGPIRAQIASDVEAPPPAPAKVEKHSKKMEEGITVNKFKPKTPYVGRCLLNTKI 103 Query: 365 TADDAPGETWHMVFSTEGAVPYK 433 T DDAPGETWHMVFS EG +PY+ Sbjct: 104 TGDDAPGETWHMVFSHEGEIPYR 126
>FENR_MESCR (P41343) Ferredoxin--NADP reductase, chloroplast precursor (EC| 1.18.1.2) (FNR) Length = 365 Score = 79.0 bits (193), Expect = 5e-15 Identities = 36/70 (51%), Positives = 42/70 (60%) Frame = +2 Query: 224 IRAQAISTDAAPXXXXXXXXXXXXXXXTNTFRPKEPYVGKCLLNTKITADDAPGETWHMV 403 IRA A +A N ++PK PY G+CLLNTKIT DDAPGETWHMV Sbjct: 53 IRAVASDVEAPVAKVEKHSKKMEEGVIVNKYKPKNPYTGRCLLNTKITGDDAPGETWHMV 112 Query: 404 FSTEGAVPYK 433 FS EG +PY+ Sbjct: 113 FSHEGEIPYR 122
>FENR_CYAPA (Q00598) Ferredoxin--NADP reductase, cyanelle precursor (EC| 1.18.1.2) (FNR) Length = 363 Score = 58.9 bits (141), Expect = 5e-09 Identities = 23/41 (56%), Positives = 30/41 (73%) Frame = +2 Query: 308 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGAVPY 430 N FRP PY+GKC+ N +I + APGET H++F+ EG VPY Sbjct: 79 NLFRPANPYIGKCIYNERIVGEGAPGETKHIIFTHEGKVPY 119
>FENR2_ORYSA (P41345) Ferredoxin--NADP reductase, root isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 378 Score = 43.1 bits (100), Expect = 3e-04 Identities = 19/41 (46%), Positives = 24/41 (58%) Frame = +2 Query: 308 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGAVPY 430 NT++PKEPY + +I APGET H+V G VPY Sbjct: 88 NTYKPKEPYTATIVSVERIVGPKAPGETCHIVIDHGGNVPY 128
>FENR_SPISP (P00454) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 294 Score = 40.8 bits (94), Expect = 0.001 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +2 Query: 308 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEG 418 N ++PK PY+GKCL N ++ + G H++F G Sbjct: 8 NIYKPKNPYIGKCLSNEELVREGGTGTVRHLIFDISG 44
>FENR2_PEA (Q41014) Ferredoxin--NADP reductase, root isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 377 Score = 40.4 bits (93), Expect = 0.002 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +2 Query: 308 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGAVPY 430 N +PKEPY + ++ APGET H+V + +G VPY Sbjct: 87 NLHKPKEPYTATIVSVERLVGPKAPGETCHIVINHDGNVPY 127
>FENR2_TOBAC (O04397) Ferredoxin--NADP reductase, root-type isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 375 Score = 40.4 bits (93), Expect = 0.002 Identities = 16/41 (39%), Positives = 24/41 (58%) Frame = +2 Query: 308 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGAVPY 430 N ++PKEPY + ++ APGET H+V +G +PY Sbjct: 86 NIYKPKEPYTATIVSVERLVGPKAPGETCHIVIDHDGNLPY 126
>FENR3_ORYSA (O23877) Ferredoxin--NADP reductase, embryo isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 378 Score = 40.0 bits (92), Expect = 0.002 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +2 Query: 308 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGAVPY 430 N ++PKEPY + ++ APGET H+V G VPY Sbjct: 88 NLYKPKEPYTATIVSVERLVGPKAPGETCHIVIDHGGNVPY 128
>FENR_CHLRE (P53991) Ferredoxin--NADP reductase, chloroplast precursor (EC| 1.18.1.2) (FNR) Length = 354 Score = 38.5 bits (88), Expect = 0.007 Identities = 17/41 (41%), Positives = 23/41 (56%) Frame = +2 Query: 308 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGAVPY 430 NT+ K P+ K KIT A GET H++ TEG +P+ Sbjct: 64 NTYSNKAPFKAKVRSVEKITGPKATGETCHIIIETEGKIPF 104
>FENR_SYNP2 (P31973) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 402 Score = 35.4 bits (80), Expect = 0.059 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = +2 Query: 308 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFS-TEGAVPY 430 N +RPK P++GKC+ N ++ + G H+ F +EG + Y Sbjct: 115 NIYRPKTPFLGKCIENYELVDEGGSGTVRHVTFDISEGDLRY 156
>FENR_SYNY3 (Q55318) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 413 Score = 34.3 bits (77), Expect = 0.13 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +2 Query: 308 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVF 406 N +RPK PY+GK L N + + A G H+ F Sbjct: 128 NIYRPKTPYIGKVLENYPLVREGAIGTVQHLTF 160
>J1L_HCMVA (P17143) Hypothetical protein J1L| Length = 309 Score = 31.6 bits (70), Expect = 0.85 Identities = 12/19 (63%), Positives = 16/19 (84%) Frame = +1 Query: 1 SPAPSQPPSLIPTRTRSPP 57 +PAP+QPPS PT +R+PP Sbjct: 27 APAPAQPPSPAPTPSRTPP 45
>FENR_SYNEL (Q93RE3) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 386 Score = 31.6 bits (70), Expect = 0.85 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +2 Query: 308 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEG 418 N +RP P +GK + N ++ + G H++F G Sbjct: 99 NIYRPNNPCIGKVISNEELVREGGEGTVKHIIFDISG 135
>CYSJ_MANSM (Q65T53) Sulfite reductase [NADPH] flavoprotein alpha-component (EC| 1.8.1.2) (SIR-FP) Length = 597 Score = 28.9 bits (63), Expect = 5.5 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = +2 Query: 314 FRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGA 421 + + PY K + N KITA D+ + H F G+ Sbjct: 229 YSKENPYTAKLITNQKITARDSAKDVRHFEFDLSGS 264
>FENR_ANAVT (Q44549) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 440 Score = 28.9 bits (63), Expect = 5.5 Identities = 11/37 (29%), Positives = 18/37 (48%) Frame = +2 Query: 308 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEG 418 N +RP P++GK + N + + G H+ F G Sbjct: 150 NLYRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTG 186
>FENR_ANASP (P58558) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 440 Score = 28.9 bits (63), Expect = 5.5 Identities = 11/37 (29%), Positives = 18/37 (48%) Frame = +2 Query: 308 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEG 418 N +RP P++GK + N + + G H+ F G Sbjct: 150 NLYRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTG 186
>FENR_ANASO (P21890) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 440 Score = 28.9 bits (63), Expect = 5.5 Identities = 11/37 (29%), Positives = 18/37 (48%) Frame = +2 Query: 308 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEG 418 N +RP P++GK + N + + G H+ F G Sbjct: 150 NLYRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTG 186
>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4| (Trithorax homolog 2) Length = 2715 Score = 28.9 bits (63), Expect = 5.5 Identities = 12/22 (54%), Positives = 13/22 (59%) Frame = +1 Query: 4 PAPSQPPSLIPTRTRSPPTVLP 69 PAPS PP L P T PP + P Sbjct: 409 PAPSPPPPLPPPSTSPPPPLCP 430
>AMHR2_RAT (Q62893) Anti-Muellerian hormone type-2 receptor precursor (EC| 2.7.11.30) (Anti-Muellerian hormone type II receptor) (AMH type II receptor) (MIS type II receptor) (MISRII) (MRII) (C14) Length = 557 Score = 28.1 bits (61), Expect = 9.4 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = +1 Query: 4 PAPSQPPSLIPTRTRSPPTVLPDG 75 P +QPP+L PT+ R P +L G Sbjct: 357 PGLAQPPALAPTQPRGPAAILEAG 380 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.134 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,907,525 Number of Sequences: 219361 Number of extensions: 404403 Number of successful extensions: 1930 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 1757 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1925 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
