ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet113f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY106306.1| Zea mays PCO069419 mRNA sequence 250 3e-63
2ref|XM_466213.1| Oryza sativa (japonica cultivar-group), mRNA 230 3e-57
3ref|XM_506826.1| PREDICTED Oryza sativa (japonica cultivar-group... 230 3e-57
4dbj|AK100187.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 3e-57
5dbj|AK060580.1| Oryza sativa (japonica cultivar-group) cDNA clon... 230 3e-57
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
7dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic D... 198 1e-47
8ref|XM_466212.1| Oryza sativa (japonica cultivar-group), mRNA 141 2e-30
9emb|AL139042.15| Human DNA sequence from clone RP11-459O1 on chr... 44 0.35
10emb|AL929433.10| Mouse DNA sequence from clone RP23-193M23 on ch... 44 0.35
11ref|XM_510526.1| PREDICTED: Pan troglodytes similar to hypotheti... 42 1.4
12ref|XM_525706.1| PREDICTED: Pan troglodytes LOC470324 (LOC470324... 42 1.4
13ref|NM_018602.2| Homo sapiens DnaJ (Hsp40) homolog, subfamily A,... 42 1.4
14ref|XM_001002972.1| PREDICTED: Mus musculus DnaJ (Hsp40) homolog... 42 1.4
15ref|XM_545895.2| PREDICTED: Canis familiaris similar to DnaJ hom... 42 1.4
16ref|XM_845309.1| PREDICTED: Canis familiaris similar to DnaJ hom... 42 1.4
17gb|BC022948.1| Mus musculus DnaJ (Hsp40) homolog, subfamily A, m... 42 1.4
18gb|AF173388.1| Homo sapiens MSTP104 (MST104) mRNA, complete cds 42 1.4
19gb|BC021720.2| Homo sapiens DnaJ (Hsp40) homolog, subfamily A, m... 42 1.4
20gb|BC031044.1| Homo sapiens DnaJ (Hsp40) homolog, subfamily A, m... 42 1.4
21gb|AC159892.2| Mus musculus BAC clone RP23-313P23 from chromosom... 42 1.4
22gb|AC090607.6| Homo sapiens chromosome 15, clone RP11-762H8, com... 42 1.4
23emb|BX648710.1|HSM808861 Homo sapiens mRNA; cDNA DKFZp686G2074 (... 42 1.4
24dbj|AK098079.1| Homo sapiens cDNA FLJ40760 fis, clone TRACH20028... 42 1.4
25dbj|AK090898.1| Homo sapiens cDNA FLJ33579 fis, clone BRAMY20117... 42 1.4
26dbj|AK096616.1| Homo sapiens cDNA FLJ39297 fis, clone OCBBF20128... 42 1.4
27emb|CR599385.1| full-length cDNA clone CS0DM005YD20 of Fetal liv... 42 1.4
28dbj|AK141909.1| Mus musculus 12 days embryo spinal ganglion cDNA... 42 1.4
29gb|AY267904.1| Sus scrofa pDJA1 chaperone mRNA, complete cds 42 1.4
30dbj|AK016666.1| Mus musculus adult male testis cDNA, RIKEN full-... 42 1.4
31dbj|AK046476.1| Mus musculus adult male corpora quadrigemina cDN... 42 1.4
32dbj|AK076175.1| Mus musculus adult male brain cDNA, RIKEN full-l... 42 1.4
33ref|NM_214339.1| Sus scrofa pDJA1 chaperone (DNAJA4), mRNA 42 1.4
34gb|BC082010.1| Rattus norvegicus DnaJ (Hsp40) homolog, subfamily... 42 1.4
35gb|BC097438.1| Rattus norvegicus DnaJ (Hsp40) homolog, subfamily... 42 1.4
36ref|NM_001025411.1| Rattus norvegicus DnaJ (Hsp40) homolog, subf... 42 1.4
37ref|NM_021422.2| Mus musculus DnaJ (Hsp40) homolog, subfamily A,... 42 1.4
38dbj|AB032401.1| Mus musculus mmDNAJA4 mRNA for mmDj4, complete cds 42 1.4
39gb|AC123656.9| Mus musculus chromosome 15, clone RP23-188M21, co... 40 5.5
40emb|Z83223.1|CEE01G4 Caenorhabditis elegans Cosmid E01G4, comple... 40 5.5
41gb|AC121932.2| Mus musculus BAC clone RP24-205N24 from 17, compl... 40 5.5
42gb|AY217749.1| Vibrio parahaemolyticus capsule polysaccharide lo... 40 5.5
43emb|AL136304.10| Human DNA sequence from clone RP1-20C7 on chrom... 40 5.5
44emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; s... 40 5.5
45emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; s... 40 5.5
46gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 5.5
47dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromo... 40 5.5
48ref|NM_064431.2| Caenorhabditis elegans E01G4.2 (E01G4.2) mRNA, ... 40 5.5
49gb|AC121114.10| Mus musculus chromosome 15, clone RP23-63M19, co... 40 5.5 
>gb|AY106306.1| Zea mays PCO069419 mRNA sequence
          Length = 889

 Score =  250 bits (126), Expect = 3e-63
 Identities = 174/190 (91%)
 Strand = Plus / Plus

                                                                       
Query: 218 ccgagtgcaacgacgtggagtgcgccccggagaaggagatcgggagcctgagcgtggagt 277
           |||| |||||||| | |||||||||||||||||||||| |||||||||||||||  ||||
Sbjct: 297 ccgactgcaacgaggaggagtgcgccccggagaaggaggtcgggagcctgagcgccgagt 356

                                                                       
Query: 278 ggctggcggaggagaggaccaaggtcgtgggaactttccctcccaagaagaaaggatgga 337
           ||||||| |||||||||||| ||||||| || ||||||||||||||||||||||| ||||
Sbjct: 357 ggctggccgaggagaggacccaggtcgtcggcactttccctcccaagaagaaagggtgga 416

                                                                       
Query: 338 ccggcctagtcgagaaggacaccgccggccagaccaacatctactccatcgagccggcgg 397
           ||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||  ||
Sbjct: 417 ccggcttagtggagaaggacaccgccggccagaccaacatctactccgtcgagccgatgg 476

                     
Query: 398 tgtacgtggc 407
           ||||||||||
Sbjct: 477 tgtacgtggc 486



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 62  agatggcttgccctgcccaatccatgctctctgcgagcagctgc 105
           |||||||||||||||| || ||||||||||| || ||| |||||
Sbjct: 108 agatggcttgccctgcgcagtccatgctctccgccagcggctgc 151
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>ref|XM_466213.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1052

 Score =  230 bits (116), Expect = 3e-57
 Identities = 170/188 (90%)
 Strand = Plus / Plus

                                                                       
Query: 223 tgcaacgacgtggagtgcgccccggagaaggagatcgggagcctgagcgtggagtggctg 282
           |||||||| | ||||||||| |||||||||||| | ||||||||||||| ||||||||||
Sbjct: 348 tgcaacgaggaggagtgcgcgccggagaaggaggtggggagcctgagcgcggagtggctg 407

                                                                       
Query: 283 gcggaggagaggaccaaggtcgtgggaactttccctcccaagaagaaaggatggaccggc 342
           ||||||||| |||||||||| || || || ||||||||||||||||| ||||||||||||
Sbjct: 408 gcggaggagcggaccaaggtggtcggcaccttccctcccaagaagaagggatggaccggc 467

                                                                       
Query: 343 ctagtcgagaaggacaccgccggccagaccaacatctactccatcgagccggcggtgtac 402
              ||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||
Sbjct: 468 tacgtcgagaaggacaccgccggccaaaccaacatctactccgtcgagccgacggtgtac 527

                   
Query: 403 gtggcgga 410
           ||||||||
Sbjct: 528 gtggcgga 535
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>ref|XM_506826.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_F08.20
           mRNA
          Length = 1060

 Score =  230 bits (116), Expect = 3e-57
 Identities = 170/188 (90%)
 Strand = Plus / Plus

                                                                       
Query: 223 tgcaacgacgtggagtgcgccccggagaaggagatcgggagcctgagcgtggagtggctg 282
           |||||||| | ||||||||| |||||||||||| | ||||||||||||| ||||||||||
Sbjct: 353 tgcaacgaggaggagtgcgcgccggagaaggaggtggggagcctgagcgcggagtggctg 412

                                                                       
Query: 283 gcggaggagaggaccaaggtcgtgggaactttccctcccaagaagaaaggatggaccggc 342
           ||||||||| |||||||||| || || || ||||||||||||||||| ||||||||||||
Sbjct: 413 gcggaggagcggaccaaggtggtcggcaccttccctcccaagaagaagggatggaccggc 472

                                                                       
Query: 343 ctagtcgagaaggacaccgccggccagaccaacatctactccatcgagccggcggtgtac 402
              ||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||
Sbjct: 473 tacgtcgagaaggacaccgccggccaaaccaacatctactccgtcgagccgacggtgtac 532

                   
Query: 403 gtggcgga 410
           ||||||||
Sbjct: 533 gtggcgga 540
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>dbj|AK100187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023033O22, full
           insert sequence
          Length = 1060

 Score =  230 bits (116), Expect = 3e-57
 Identities = 170/188 (90%)
 Strand = Plus / Plus

                                                                       
Query: 223 tgcaacgacgtggagtgcgccccggagaaggagatcgggagcctgagcgtggagtggctg 282
           |||||||| | ||||||||| |||||||||||| | ||||||||||||| ||||||||||
Sbjct: 353 tgcaacgaggaggagtgcgcgccggagaaggaggtggggagcctgagcgcggagtggctg 412

                                                                       
Query: 283 gcggaggagaggaccaaggtcgtgggaactttccctcccaagaagaaaggatggaccggc 342
           ||||||||| |||||||||| || || || ||||||||||||||||| ||||||||||||
Sbjct: 413 gcggaggagcggaccaaggtggtcggcaccttccctcccaagaagaagggatggaccggc 472

                                                                       
Query: 343 ctagtcgagaaggacaccgccggccagaccaacatctactccatcgagccggcggtgtac 402
              ||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||
Sbjct: 473 tacgtcgagaaggacaccgccggccaaaccaacatctactccgtcgagccgacggtgtac 532

                   
Query: 403 gtggcgga 410
           ||||||||
Sbjct: 533 gtggcgga 540
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>dbj|AK060580.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-G04, full
           insert sequence
          Length = 1052

 Score =  230 bits (116), Expect = 3e-57
 Identities = 170/188 (90%)
 Strand = Plus / Plus

                                                                       
Query: 223 tgcaacgacgtggagtgcgccccggagaaggagatcgggagcctgagcgtggagtggctg 282
           |||||||| | ||||||||| |||||||||||| | ||||||||||||| ||||||||||
Sbjct: 348 tgcaacgaggaggagtgcgcgccggagaaggaggtggggagcctgagcgcggagtggctg 407

                                                                       
Query: 283 gcggaggagaggaccaaggtcgtgggaactttccctcccaagaagaaaggatggaccggc 342
           ||||||||| |||||||||| || || || ||||||||||||||||| ||||||||||||
Sbjct: 408 gcggaggagcggaccaaggtggtcggcaccttccctcccaagaagaagggatggaccggc 467

                                                                       
Query: 343 ctagtcgagaaggacaccgccggccagaccaacatctactccatcgagccggcggtgtac 402
              ||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||
Sbjct: 468 tacgtcgagaaggacaccgccggccaaaccaacatctactccgtcgagccgacggtgtac 527

                   
Query: 403 gtggcgga 410
           ||||||||
Sbjct: 528 gtggcgga 535
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  198 bits (100), Expect = 1e-47
 Identities = 151/168 (89%)
 Strand = Plus / Minus

                                                                            
Query: 223      tgcaacgacgtggagtgcgccccggagaaggagatcgggagcctgagcgtggagtggctg 282
                |||||||| | ||||||||| |||||||||||| | ||||||||||||| ||||||||||
Sbjct: 21080598 tgcaacgaggaggagtgcgcgccggagaaggaggtggggagcctgagcgcggagtggctg 21080539

                                                                            
Query: 283      gcggaggagaggaccaaggtcgtgggaactttccctcccaagaagaaaggatggaccggc 342
                ||||||||| |||||||||| || || || ||||||||||||||||| ||||||||||||
Sbjct: 21080538 gcggaggagcggaccaaggtggtcggcaccttccctcccaagaagaagggatggaccggc 21080479

                                                                
Query: 343      ctagtcgagaaggacaccgccggccagaccaacatctactccatcgag 390
                   ||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 21080478 tacgtcgagaaggacaccgccggccaaaccaacatctactccgtcgag 21080431
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>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_F08
          Length = 105979

 Score =  198 bits (100), Expect = 1e-47
 Identities = 151/168 (89%)
 Strand = Plus / Minus

                                                                         
Query: 223   tgcaacgacgtggagtgcgccccggagaaggagatcgggagcctgagcgtggagtggctg 282
             |||||||| | ||||||||| |||||||||||| | ||||||||||||| ||||||||||
Sbjct: 82343 tgcaacgaggaggagtgcgcgccggagaaggaggtggggagcctgagcgcggagtggctg 82284

                                                                         
Query: 283   gcggaggagaggaccaaggtcgtgggaactttccctcccaagaagaaaggatggaccggc 342
             ||||||||| |||||||||| || || || ||||||||||||||||| ||||||||||||
Sbjct: 82283 gcggaggagcggaccaaggtggtcggcaccttccctcccaagaagaagggatggaccggc 82224

                                                             
Query: 343   ctagtcgagaaggacaccgccggccagaccaacatctactccatcgag 390
                ||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 82223 tacgtcgagaaggacaccgccggccaaaccaacatctactccgtcgag 82176
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>ref|XM_466212.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 819

 Score =  141 bits (71), Expect = 2e-30
 Identities = 107/119 (89%)
 Strand = Plus / Minus

                                                                       
Query: 223 tgcaacgacgtggagtgcgccccggagaaggagatcgggagcctgagcgtggagtggctg 282
           |||||||| | ||||||||| |||||||||||| | ||||||||||||| ||||||||||
Sbjct: 512 tgcaacgaggaggagtgcgcgccggagaaggaggtggggagcctgagcgcggagtggctg 453

                                                                      
Query: 283 gcggaggagaggaccaaggtcgtgggaactttccctcccaagaagaaaggatggaccgg 341
           ||||||||| |||||||||| || || || ||||||||||||||||| |||||||||||
Sbjct: 452 gcggaggagcggaccaaggtggtcggcaccttccctcccaagaagaagggatggaccgg 394
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>emb|AL139042.15| Human DNA sequence from clone RP11-459O1 on chromosome 6 Contains an
              actin beta (ACTB) pseudogene and part of a novel gene,
              complete sequence
          Length = 107745

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 159    caatggcaacagcaggttcttgacag 184
              |||||||||||||||||| |||||||
Sbjct: 107072 caatggcaacagcaggtttttgacag 107047
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>emb|AL929433.10| Mouse DNA sequence from clone RP23-193M23 on chromosome 4, complete
              sequence
          Length = 198426

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 159    caatggcaacagcaggttcttgacag 184
              |||||||||||||||||| |||||||
Sbjct: 110425 caatggcaacagcaggtttttgacag 110450
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>ref|XM_510526.1| PREDICTED: Pan troglodytes similar to hypothetical protein
            (LOC453567), mRNA
          Length = 1911

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 246  ggagaaggagatcgggagcctgagc 270
            ||||||||||||| |||||||||||
Sbjct: 1396 ggagaaggagatcaggagcctgagc 1420
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>ref|XM_525706.1| PREDICTED: Pan troglodytes LOC470324 (LOC470324), mRNA
          Length = 15741

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 111   cctcaggagcagcaagccccagcag 135
             |||||||||||||| ||||||||||
Sbjct: 10463 cctcaggagcagcaggccccagcag 10487
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>ref|NM_018602.2| Homo sapiens DnaJ (Hsp40) homolog, subfamily A, member 4 (DNAJA4),
           mRNA
          Length = 3175

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 ggagaaggagatcgggagcctgagc 270
           ||||||||||||| |||||||||||
Sbjct: 926 ggagaaggagatcaggagcctgagc 950
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>ref|XM_001002972.1| PREDICTED: Mus musculus DnaJ (Hsp40) homolog, subfamily A, member 4
            (Dnaja4), mRNA
          Length = 3305

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 246  ggagaaggagatcgggagcctgagc 270
            ||||||||||||| |||||||||||
Sbjct: 1153 ggagaaggagatcaggagcctgagc 1177
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>ref|XM_545895.2| PREDICTED: Canis familiaris similar to DnaJ homolog subfamily A
           member 4, transcript variant 1 (LOC488777), mRNA
          Length = 1456

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 ggagaaggagatcgggagcctgagc 270
           ||||||||||||| |||||||||||
Sbjct: 688 ggagaaggagatcaggagcctgagc 712
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>ref|XM_845309.1| PREDICTED: Canis familiaris similar to DnaJ homolog subfamily A
           member 4, transcript variant 3 (LOC488777), mRNA
          Length = 1467

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 ggagaaggagatcgggagcctgagc 270
           ||||||||||||| |||||||||||
Sbjct: 699 ggagaaggagatcaggagcctgagc 723
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>gb|BC022948.1| Mus musculus DnaJ (Hsp40) homolog, subfamily A, member 4, mRNA
           (cDNA clone MGC:30492 IMAGE:4219700), complete cds
          Length = 1609

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 ggagaaggagatcgggagcctgagc 270
           ||||||||||||| |||||||||||
Sbjct: 347 ggagaaggagatcaggagcctgagc 371
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>gb|AF173388.1| Homo sapiens MSTP104 (MST104) mRNA, complete cds
          Length = 1158

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 ggagaaggagatcgggagcctgagc 270
           ||||||||||||| |||||||||||
Sbjct: 534 ggagaaggagatcaggagcctgagc 558
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>gb|BC021720.2| Homo sapiens DnaJ (Hsp40) homolog, subfamily A, member 4, mRNA
           (cDNA clone MGC:33001 IMAGE:4831235), complete cds
          Length = 1550

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 ggagaaggagatcgggagcctgagc 270
           ||||||||||||| |||||||||||
Sbjct: 935 ggagaaggagatcaggagcctgagc 959
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>gb|BC031044.1| Homo sapiens DnaJ (Hsp40) homolog, subfamily A, member 4, mRNA
           (cDNA clone MGC:33002 IMAGE:5277834), complete cds
          Length = 1411

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 ggagaaggagatcgggagcctgagc 270
           ||||||||||||| |||||||||||
Sbjct: 658 ggagaaggagatcaggagcctgagc 682
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>gb|AC159892.2| Mus musculus BAC clone RP23-313P23 from chromosome 9, complete sequence
          Length = 199351

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 246   ggagaaggagatcgggagcctgagc 270
             ||||||||||||| |||||||||||
Sbjct: 17335 ggagaaggagatcaggagcctgagc 17359
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>gb|AC090607.6| Homo sapiens chromosome 15, clone RP11-762H8, complete sequence
          Length = 156559

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 246   ggagaaggagatcgggagcctgagc 270
             ||||||||||||| |||||||||||
Sbjct: 91918 ggagaaggagatcaggagcctgagc 91942
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>emb|BX648710.1|HSM808861 Homo sapiens mRNA; cDNA DKFZp686G2074 (from clone DKFZp686G2074)
          Length = 3087

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 ggagaaggagatcgggagcctgagc 270
           ||||||||||||| |||||||||||
Sbjct: 817 ggagaaggagatcaggagcctgagc 841
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>dbj|AK098079.1| Homo sapiens cDNA FLJ40760 fis, clone TRACH2002803, highly similar
           to Mus musculus mmDNAJA4 mRNA for mmDj4
          Length = 3175

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 ggagaaggagatcgggagcctgagc 270
           ||||||||||||| |||||||||||
Sbjct: 926 ggagaaggagatcaggagcctgagc 950
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>dbj|AK090898.1| Homo sapiens cDNA FLJ33579 fis, clone BRAMY2011767, highly similar
           to Mus musculus mmDNAJA4 mRNA for mmDj4
          Length = 2514

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 ggagaaggagatcgggagcctgagc 270
           ||||||||||||| |||||||||||
Sbjct: 267 ggagaaggagatcaggagcctgagc 291
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>dbj|AK096616.1| Homo sapiens cDNA FLJ39297 fis, clone OCBBF2012812, highly similar
           to Mus musculus mmDNAJA4 mRNA for mmDj4
          Length = 3043

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 ggagaaggagatcgggagcctgagc 270
           ||||||||||||| |||||||||||
Sbjct: 796 ggagaaggagatcaggagcctgagc 820
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>emb|CR599385.1| full-length cDNA clone CS0DM005YD20 of Fetal liver of Homo sapiens
           (human)
          Length = 1576

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 ggagaaggagatcgggagcctgagc 270
           ||||||||||||| |||||||||||
Sbjct: 905 ggagaaggagatcaggagcctgagc 929
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>dbj|AK141909.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
           enriched library, clone:D130061M21 product:DnaJ (Hsp40)
           homolog, subfamily A, member 4, full insert sequence
          Length = 3004

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 ggagaaggagatcgggagcctgagc 270
           ||||||||||||| |||||||||||
Sbjct: 851 ggagaaggagatcaggagcctgagc 875
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>gb|AY267904.1| Sus scrofa pDJA1 chaperone mRNA, complete cds
          Length = 3014

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 ggagaaggagatcgggagcctgagc 270
           ||||||||||||| |||||||||||
Sbjct: 740 ggagaaggagatcaggagcctgagc 764
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>dbj|AK016666.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4933405I15 product:DnaJ (Hsp40) homolog,
           subfamily A, member 4, full insert sequence
          Length = 1043

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 ggagaaggagatcgggagcctgagc 270
           ||||||||||||| |||||||||||
Sbjct: 446 ggagaaggagatcaggagcctgagc 470
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>dbj|AK046476.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN
           full-length enriched library, clone:B230397D24
           product:DnaJ (Hsp40) homolog, subfamily A, member 4,
           full insert sequence
          Length = 2097

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 ggagaaggagatcgggagcctgagc 270
           ||||||||||||| |||||||||||
Sbjct: 850 ggagaaggagatcaggagcctgagc 874
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>dbj|AK076175.1| Mus musculus adult male brain cDNA, RIKEN full-length enriched
           library, clone:3632452C24 product:DnaJ (Hsp40) homolog,
           subfamily A, member 4, full insert sequence
          Length = 3001

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 ggagaaggagatcgggagcctgagc 270
           ||||||||||||| |||||||||||
Sbjct: 850 ggagaaggagatcaggagcctgagc 874
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>ref|NM_214339.1| Sus scrofa pDJA1 chaperone (DNAJA4), mRNA
          Length = 3014

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 ggagaaggagatcgggagcctgagc 270
           ||||||||||||| |||||||||||
Sbjct: 740 ggagaaggagatcaggagcctgagc 764
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>gb|BC082010.1| Rattus norvegicus DnaJ (Hsp40) homolog, subfamily A, member 4
            (predicted), mRNA (cDNA clone IMAGE:7131770)
          Length = 1848

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 246  ggagaaggagatcgggagcctgagc 270
            ||||||||||||| |||||||||||
Sbjct: 1227 ggagaaggagatcaggagcctgagc 1251
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>gb|BC097438.1| Rattus norvegicus DnaJ (Hsp40) homolog, subfamily A, member 4, mRNA
            (cDNA clone MGC:114488 IMAGE:7455678), complete cds
          Length = 1941

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 246  ggagaaggagatcgggagcctgagc 270
            ||||||||||||| |||||||||||
Sbjct: 1229 ggagaaggagatcaggagcctgagc 1253
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>ref|NM_001025411.1| Rattus norvegicus DnaJ (Hsp40) homolog, subfamily A, member 4
            (Dnaja4), mRNA
          Length = 1941

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 246  ggagaaggagatcgggagcctgagc 270
            ||||||||||||| |||||||||||
Sbjct: 1229 ggagaaggagatcaggagcctgagc 1253
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>ref|NM_021422.2| Mus musculus DnaJ (Hsp40) homolog, subfamily A, member 4 (Dnaja4),
           mRNA
          Length = 3001

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 ggagaaggagatcgggagcctgagc 270
           ||||||||||||| |||||||||||
Sbjct: 850 ggagaaggagatcaggagcctgagc 874
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>dbj|AB032401.1| Mus musculus mmDNAJA4 mRNA for mmDj4, complete cds
          Length = 1319

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 246 ggagaaggagatcgggagcctgagc 270
           ||||||||||||| |||||||||||
Sbjct: 716 ggagaaggagatcaggagcctgagc 740
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>gb|AC123656.9| Mus musculus chromosome 15, clone RP23-188M21, complete sequence
          Length = 200922

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 120    cagcaagccccagcaggcca 139
              ||||||||||||||||||||
Sbjct: 179697 cagcaagccccagcaggcca 179678
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>emb|Z83223.1|CEE01G4 Caenorhabditis elegans Cosmid E01G4, complete sequence
          Length = 43442

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 347  tcgagaaggacaccgccggc 366
            ||||||||||||||||||||
Sbjct: 8217 tcgagaaggacaccgccggc 8198
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>gb|AC121932.2| Mus musculus BAC clone RP24-205N24 from 17, complete sequence
          Length = 152782

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 311    ctttccctcccaagaagaaa 330
              ||||||||||||||||||||
Sbjct: 127848 ctttccctcccaagaagaaa 127829
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>gb|AY217749.1| Vibrio parahaemolyticus capsule polysaccharide locus, partial
            sequence
          Length = 11750

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  tagtcgagaaggacaccgcc 363
            ||||||||||||||||||||
Sbjct: 5910 tagtcgagaaggacaccgcc 5891
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>emb|AL136304.10| Human DNA sequence from clone RP1-20C7 on chromosome 6p12.3-21.2
             Contains the PPP2R5D gene for delta variant of protein
             phosphatase 2 regulatory subunit B (B56), the MEA gene for
             male-enhanced antigen, the gene for testis intracellular
             mediator protein (PEAS), the gene for a novel protein
             (LOC88745), the 3' end of a  gene for a novel protein
             (KIAA0076 KIAA0708) and a CpG island, complete sequence
          Length = 65612

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   tgctcctcaggagcagcaag 126
             ||||||||||||||||||||
Sbjct: 44932 tgctcctcaggagcagcaag 44951
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>emb|AL590464.1|SCO590464 Streptomyces coelicolor plasmid SCP1; segment 2/2
          Length = 178073

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 383    ccatcgagccggcggtgtac 402
              ||||||||||||||||||||
Sbjct: 136410 ccatcgagccggcggtgtac 136429
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>emb|AL590463.1|SCO590463 Streptomyces coelicolor plasmid SCP1; segment 1/2
          Length = 178000

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 383   ccatcgagccggcggtgtac 402
             ||||||||||||||||||||
Sbjct: 41664 ccatcgagccggcggtgtac 41645
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 170     gcaggttcttgacagtctcctgca 193
               ||||||||| ||||||||||||||
Sbjct: 2106533 gcaggttctcgacagtctcctgca 2106510
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>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence
          Length = 1877212

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 344     tagtcgagaaggacaccgcc 363
               ||||||||||||||||||||
Sbjct: 1479948 tagtcgagaaggacaccgcc 1479929
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>ref|NM_064431.2| Caenorhabditis elegans E01G4.2 (E01G4.2) mRNA, complete cds
          Length = 1401

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 347  tcgagaaggacaccgccggc 366
            ||||||||||||||||||||
Sbjct: 1238 tcgagaaggacaccgccggc 1257
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>gb|AC121114.10| Mus musculus chromosome 15, clone RP23-63M19, complete sequence
          Length = 337658

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    cagcaagccccagcaggcca 139
              ||||||||||||||||||||
Sbjct: 252361 cagcaagccccagcaggcca 252380


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,754,587
Number of Sequences: 3902068
Number of extensions: 2754587
Number of successful extensions: 54514
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 54391
Number of HSP's gapped (non-prelim): 123
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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