ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet113e10 |
|---|---|
| Clone Library Name | barley_pub |
>DLGP3_RAT (P97838) Disks large-associated protein 3 (DAP-3)| (SAP90/PSD-95-associated protein 3) (SAPAP3) (PSD-95/SAP90-binding protein 3) Length = 977 Score = 31.2 bits (69), Expect = 0.63 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 8/57 (14%) Frame = +2 Query: 209 QVAIKCKNVDGEYESKAVGALDGTGAFSVPLDANLRGV--------DCVAQLHSAAS 355 Q+ C +V GE ES+AV ALD G F + + LR + DC+ L + AS Sbjct: 468 QLEAVCGSVFGELESQAVDALDLPGCFRMRSHSYLRAIQAGCSQDDDCLPLLAAPAS 524
>DLGP3_MOUSE (Q6PFD5) Disks large-associated protein 3 (DAP-3)| (SAP90/PSD-95-associated protein 3) (SAPAP3) (PSD-95/SAP90-binding protein 3) Length = 977 Score = 31.2 bits (69), Expect = 0.63 Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 8/57 (14%) Frame = +2 Query: 209 QVAIKCKNVDGEYESKAVGALDGTGAFSVPLDANLRGV--------DCVAQLHSAAS 355 Q+ C +V GE ES+AV ALD G F + + LR + DC+ L + AS Sbjct: 468 QLEAVCGSVFGELESQAVDALDLPGCFRMRSHSYLRAIQAGCSQDDDCLPLLAAPAS 524
>DLGP3_HUMAN (O95886) Disks large-associated protein 3 (DAP-3)| (SAP90/PSD-95-associated protein 3) (SAPAP3) (PSD-95/SAP90-binding protein 3) Length = 979 Score = 30.0 bits (66), Expect = 1.4 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 8/57 (14%) Frame = +2 Query: 209 QVAIKCKNVDGEYESKAVGALDGTGAFSVPLDANLRGV--------DCVAQLHSAAS 355 Q+ C +V GE ES+AV ALD G F + + LR + DC+ L + A+ Sbjct: 470 QLEAVCGSVFGELESQAVDALDLPGCFRMRSHSYLRAIQAGCSQDDDCLPLLATPAA 526
>NRFA_PASMU (Q9CPL4) Cytochrome c-552 precursor (EC 1.7.2.2) (Ammonia-forming| cytochrome c nitrite reductase) (Cytochrome c nitrite reductase) Length = 510 Score = 29.6 bits (65), Expect = 1.8 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = -2 Query: 372 PEHGALEAALWSCATQSTPRRLASRG 295 P+ G + A WSC + PR +A RG Sbjct: 143 PDAGPMPMACWSCKSPDVPRLIAERG 168
>EGF_HUMAN (P01133) Pro-epidermal growth factor precursor (EGF) [Contains:| Epidermal growth factor (Urogastrone)] Length = 1207 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/53 (28%), Positives = 22/53 (41%) Frame = +2 Query: 221 KCKNVDGEYESKAVGALDGTGAFSVPLDANLRGVDCVAQLHSAASNAPCSGQE 379 KC N +G Y + G G + +D +C +HS NA C+ E Sbjct: 887 KCINTEGGYVCRCSEGYQGDGIHCLDID------ECQLGVHSCGENASCTNTE 933
>TR19L_HUMAN (Q969Z4) Tumor necrosis factor receptor superfamily member 19L| precursor (Receptor expressed in lymphoid tissues) Length = 430 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/61 (29%), Positives = 22/61 (36%) Frame = -2 Query: 375 WPEHGALEAALWSCATQSTPRRLASRGTLKAPVPSRAPTALLSYSPSTFLHLIATWRPLK 196 WP LW C P +GTL P P +A SP + WR L+ Sbjct: 19 WPLATLTSTTLWQCPPGEEPDLDPGQGTLCRPCPPGTFSAAWGSSPCQPHARCSLWRRLE 78 Query: 195 A 193 A Sbjct: 79 A 79
>POLS_RUBVM (P08563) Structural polyprotein [Contains: Nucleocapsid protein C;| Membrane glycoprotein E2; Membrane glycoprotein E1] Length = 992 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/37 (43%), Positives = 17/37 (45%) Frame = -2 Query: 372 PEHGALEAALWSCATQSTPRRLASRGTLKAPVPSRAP 262 P GA + WS A R SR AP PSRAP Sbjct: 63 PRTGAWQRKDWSRAPPPPEERQESRSQTPAPKPSRAP 99
>CCNB_DROME (P20439) G2/mitotic-specific cyclin-B| Length = 530 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Frame = +2 Query: 173 KNIKAEEAFKGLQVAIKCKNVDGEYESKAVGALDGTGAFSVPLDANLRGVDCVAQLHSAA 352 K++K +A + + VD ++ + +G+ +G G +VP N GV + +S Sbjct: 63 KDLKLTDALRNAKA-----RVDSHWKKQPLGSTNGNGNGAVPPKVNEGGVSAFLRSNSVR 117 Query: 353 SNAPC-SGQEPSKI 391 + P + EP+K+ Sbjct: 118 NRVPTKTTVEPTKV 131
>GALT7_DROME (Q8MV48) N-acetylgalactosaminyltransferase 7 (EC 2.4.1.-)| (Protein-UDP acetylgalactosaminyltransferase 7) (UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 7) (pp-GaNTase 7) (dGalNAc-T2) Length = 591 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = +2 Query: 197 FKGLQVAIKCKNVDGEYESKAVGALDGTGAFSVPLDAN 310 FKGL I+ K +G +++ GA++ TG V LDA+ Sbjct: 200 FKGLVKVIRNKEREGLIRTRSRGAMEATGEVIVFLDAH 237
>CARA_COREF (Q8FT41) Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase glutamine chain) Length = 400 Score = 28.5 bits (62), Expect = 4.1 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = -2 Query: 327 QSTPRRLASRGTLKAPVPSRAP-TALLSYSPS 235 Q+TPRR A+RG VP+ P + Y+PS Sbjct: 212 QNTPRRFAARGVRTVIVPAETPFEEIKQYNPS 243
>SEC14_YARLI (P45816) SEC14 cytosolic factor| (Phosphatidylinositol/phosphatidylcholine transfer protein) (PI/PC TP) Length = 492 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = -2 Query: 363 GALEAALWSCATQSTPRRLASRGTLKAPVPSRAPTA 256 GA AA S + Q+ P + A KAPVP+ A TA Sbjct: 352 GAAAAAGASSSKQAAPAQAAPAQAAKAPVPAAAKTA 387
>VGLM_BHV1C (P52370) Glycoprotein M| Length = 411 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = -2 Query: 378 SWPEHGALEAALWSCATQSTPRRLASRGTLKAPVPSRAP 262 +WP A + W+ A+ T RR +R T P P+R P Sbjct: 374 AWPRSKATQRRCWTAASPLTTRRPCTRRT---PRPARQP 409
>ILV3_BRANA (P27819) Acetolactate synthase 3, chloroplast precursor (EC| 2.2.1.6) (Acetolactate synthase III) (Acetohydroxy-acid synthase III) (ALS III) Length = 652 Score = 28.1 bits (61), Expect = 5.3 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Frame = -2 Query: 339 SCATQSTPRRLASRGTLKAPVP-SR--APTALLSYSPSTFLHLIATWRPLKASSAL 181 + AT S+P L ++ + K+P+P SR P +L PS+ LH RPL S+ L Sbjct: 2 AAATSSSPISLTAKPSSKSPLPISRFSLPFSLTPQKPSSRLH-----RPLAISAVL 52
>HEM3_LEIXX (Q6AHF1) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 329 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Frame = +2 Query: 203 GLQVAIKCKNVDGEYESKAVGALDGTGAFSVPLDANLRGVDCVAQLHSAAS--NAPCSG 373 G + + G+ +++ L GTG F+ L LR +C +HS AP G Sbjct: 41 GFDIELVTVTTHGDTSRESLSELGGTGVFATALRDALRNGECDLVVHSLKDLPTAPAPG 99
>ISPG_BACFR (Q64N34) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC| 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 626 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = +2 Query: 140 VGLAKCADCTRKNIKAEEAFKGLQVAIKCKNVDGEYESK 256 + L K +C KNI EEA + L IK +G+YE K Sbjct: 578 ISLYKQKECIEKNIPEEEAVEKLIELIK---ANGDYEEK 613
>ISPG_BACFN (Q5L7W2) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC| 1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase) Length = 626 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/39 (41%), Positives = 21/39 (53%) Frame = +2 Query: 140 VGLAKCADCTRKNIKAEEAFKGLQVAIKCKNVDGEYESK 256 + L K +C KNI EEA + L IK +G+YE K Sbjct: 578 ISLYKQKECIEKNIPEEEAVEKLIELIK---ANGDYEEK 613
>FLAB2_AERPE (Q9YAN6) Probable flagellin 2 precursor| Length = 246 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/36 (33%), Positives = 22/36 (61%) Frame = +2 Query: 200 KGLQVAIKCKNVDGEYESKAVGALDGTGAFSVPLDA 307 +GL+ A VDG ++A+ A TG++++ +DA Sbjct: 47 RGLEEATSALEVDGSVIARAIDADTTTGSYNIVVDA 82
>WDR63_MACFA (Q95JP0) WD-repeat protein 63| Length = 891 Score = 27.3 bits (59), Expect = 9.0 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = -2 Query: 240 PSTFLHLIATWRPL 199 PSTFLHL +W+PL Sbjct: 551 PSTFLHLDLSWKPL 564
>WDR63_HUMAN (Q8IWG1) WD-repeat protein 63 (Testis development protein NYD-SP29)| Length = 891 Score = 27.3 bits (59), Expect = 9.0 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = -2 Query: 240 PSTFLHLIATWRPL 199 PSTFLHL +W+PL Sbjct: 551 PSTFLHLDLSWKPL 564
>PMPH_CHLTR (O84880) Probable outer membrane protein pmpH precursor| (Polymorphic membrane protein H) Length = 1016 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/43 (32%), Positives = 19/43 (44%) Frame = -2 Query: 363 GALEAALWSCATQSTPRRLASRGTLKAPVPSRAPTALLSYSPS 235 GA E W + +P + T P P+ AP A S SP+ Sbjct: 133 GAGEVIFWDNSVGYSPLSIVPASTPTPPAPAPAPAASSSLSPT 175
>MURB_STRCO (Q9L0L7) UDP-N-acetylenolpyruvoylglucosamine reductase (EC| 1.1.1.158) (UDP-N-acetylmuramate dehydrogenase) Length = 383 Score = 27.3 bits (59), Expect = 9.0 Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 7/76 (9%) Frame = +2 Query: 188 EEAFKG--LQVAIKCKNVDGEYESKAVGALDGTGAFSVPLDANLRGVDCVAQLHSAASNA 361 ++ F G L +A + +DG A G + T A + ++A L GV+C+A + +A Sbjct: 92 DKGFDGTALHIATRGFRLDGTTLELAAGEI-WTDAVARTVEAGLAGVECLAGIPGSAGAT 150 Query: 362 PCS-----GQEPSKIV 394 P GQE S + Sbjct: 151 PIQNVGAYGQEVSATI 166 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.312 0.127 0.372 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,273,987 Number of Sequences: 219361 Number of extensions: 425886 Number of successful extensions: 1410 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 1382 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1408 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 1375720320 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
