ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet113c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY857758.1| Triticum monococcum peroxidase 4 (POX4) mRNA, com... 119 2e-24
2gb|L36093.1|BLYPRX Barley peroxidase mRNA, complete cds 56 3e-05
3gb|AY857755.1| Triticum monococcum peroxidase 1 (POX1) mRNA, com... 50 0.002
4gb|AY857756.1| Triticum monococcum peroxidase 2 (POX2) mRNA, com... 48 0.007
5emb|X85227.1|TAPOX1 T.aestivum pox1 gene 48 0.007
6emb|X58396.1|HVPEROXI Barley mRNA for peroxidase (EC=1.11.1.7) 48 0.007
7gb|AF402769.1|AF402769 Zea mays peroxidase P7X gene, promoter an... 48 0.007
8gb|AF037034.2|AF037034 Zea mays putative peroxidase P7X mRNA, co... 48 0.007
9ref|XM_479516.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.026
10ref|XM_479511.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.026
11emb|X56011.1|TAPERO Wheat mRNA for peroxidase 46 0.026
12dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.026
13gb|AF247700.2|AF247700 Oryza sativa peroxidase POC1 mRNA, comple... 46 0.026
14dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.026
15dbj|AK101772.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.026
16dbj|AP003757.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.026
17tpe|BN000643.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 46 0.026
18tpe|BN000639.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 46 0.026
19ref|XM_476454.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.10
20dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic D... 44 0.10
21dbj|AK109848.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.10
22dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 42 0.41
23dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.41
24tpe|BN000659.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 42 0.41
25gb|AF078872.1|AF078872 Avena sativa cultivar Ogle peroxidase PXC... 42 0.41
26gb|AF078871.1|AF078871 Avena sativa cultivar Ogle peroxidase PXC... 42 0.41
27gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.41
28emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa... 42 0.41
29ref|XM_464162.1| Oryza sativa (japonica cultivar-group), mRNA 40 1.6
30gb|DQ466088.1| Oryza sativa (japonica cultivar-group) putative s... 40 1.6
31emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 1.6
32emb|AL360006.15| Human DNA sequence from clone RP11-528D17 on ch... 40 1.6
33emb|AL356357.22| Human DNA sequence from clone RP4-550F15 on chr... 40 1.6
34gb|AE011999.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 1.6
35dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.6
36dbj|AP005191.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.6
37dbj|AK120401.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 1.6
38gb|AF014468.1|AF014468 Oryza sativa peroxidase (POX8.1) mRNA, co... 40 1.6
39ref|XM_550613.1| Oryza sativa (japonica cultivar-group), mRNA 38 6.4
40gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete se... 38 6.4
41gb|AC154760.2| Mus musculus BAC clone RP24-414E6 from chromosome... 38 6.4
42gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 38 6.4
43gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 38 6.4
44gb|CP000316.1| Polaromonas sp. JS666, complete genome 38 6.4
45ref|XM_502781.1| Yarrowia lipolytica CLIB122, YALI0D13200g predi... 38 6.4
46gb|AC121341.2| Homo sapiens X BAC RP11-655M17 (Roswell Park Canc... 38 6.4
47gb|CP000264.1| Jannaschia sp. CCS1, complete genome 38 6.4
48gb|AF413082.1|AF413082 Oryza sativa EPSP synthase mRNA, complete... 38 6.4
49gb|AF413081.1|AF413081 Oryza sativa 5-enolpyruvylshikimate 3-pho... 38 6.4
50gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 38 6.4
51dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 38 6.4
52gb|AF546189.1| Contiguous genomic DNA sequence comprising the 19... 38 6.4
53dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic D... 38 6.4
54dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic D... 38 6.4
55gb|AY623658.2| Aeromicrobium erythreum putative transcriptional ... 38 6.4
56emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 38 6.4
57emb|AL683894.6| Mouse DNA sequence from clone RP23-109G18 on chr... 38 6.4
58dbj|AB052962.1| Oryza sativa EPSPs, rps20 genes for 3-phosphoshi... 38 6.4 
>gb|AY857758.1| Triticum monococcum peroxidase 4 (POX4) mRNA, complete cds
          Length = 1281

 Score =  119 bits (60), Expect = 2e-24
 Identities = 77/82 (93%), Gaps = 3/82 (3%)
 Strand = Plus / Plus

                                                                       
Query: 48  agccatggcctctacttcgtccctatcagtcgtgttgctcttgtgcctggccgtggcggc 107
           |||||||||||   ||||||| ||||||| ||||||||||||||||||||||||||||||
Sbjct: 51  agccatggcct---cttcgtctctatcagccgtgttgctcttgtgcctggccgtggcggc 107

                                 
Query: 108 gtcggcgcagctgtcgccgacg 129
           ||||||||||||||||||||||
Sbjct: 108 gtcggcgcagctgtcgccgacg 129
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>gb|L36093.1|BLYPRX Barley peroxidase mRNA, complete cds
          Length = 1262

 Score = 56.0 bits (28), Expect = 3e-05
 Identities = 28/28 (100%)
 Strand = Plus / Plus

                                       
Query: 102 ggcggcgtcggcgcagctgtcgccgacg 129
           ||||||||||||||||||||||||||||
Sbjct: 118 ggcggcgtcggcgcagctgtcgccgacg 145
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>gb|AY857755.1| Triticum monococcum peroxidase 1 (POX1) mRNA, complete cds
          Length = 1259

 Score = 50.1 bits (25), Expect = 0.002
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 105 ggcgtcggcgcagctgtcgccgacg 129
           |||||||||||||||||||||||||
Sbjct: 99  ggcgtcggcgcagctgtcgccgacg 123
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>gb|AY857756.1| Triticum monococcum peroxidase 2 (POX2) mRNA, complete cds
          Length = 1250

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 102 ggcggcgtcggcgcagctgtcgccgacg 129
           ||||||||||| ||||||||||||||||
Sbjct: 132 ggcggcgtcggggcagctgtcgccgacg 159
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>emb|X85227.1|TAPOX1 T.aestivum pox1 gene
          Length = 1722

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 102 ggcggcgtcggcgcagctgtcgccgacg 129
           |||||||||||||||||||||| |||||
Sbjct: 270 ggcggcgtcggcgcagctgtcgtcgacg 297
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>emb|X58396.1|HVPEROXI Barley mRNA for peroxidase (EC=1.11.1.7)
          Length = 1285

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 102 ggcggcgtcggcgcagctgtcgccgacg 129
           ||||||||| ||||||||||||||||||
Sbjct: 118 ggcggcgtcagcgcagctgtcgccgacg 145
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>gb|AF402769.1|AF402769 Zea mays peroxidase P7X gene, promoter and partial cds
          Length = 1363

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 102  ggcggcgtcggcgcagctgtcgccgacg 129
            |||||||||||||||||||||| |||||
Sbjct: 1075 ggcggcgtcggcgcagctgtcgtcgacg 1102
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>gb|AF037034.2|AF037034 Zea mays putative peroxidase P7X mRNA, complete cds
          Length = 1360

 Score = 48.1 bits (24), Expect = 0.007
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 102 ggcggcgtcggcgcagctgtcgccgacg 129
           |||||||||||||||||||||| |||||
Sbjct: 146 ggcggcgtcggcgcagctgtcgtcgacg 173
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>ref|XM_479516.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 936

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 103 gcggcgtcggcgcagctgtcgccgacg 129
           ||||||||||||||||||||| |||||
Sbjct: 52  gcggcgtcggcgcagctgtcggcgacg 78
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>ref|XM_479511.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1256

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 83  tgctcttgtgcctggccgtggcggcgtcggcgcagctgtcgccgacg 129
           ||||| ||||||| ||||  || ||| ||||||||||||||||||||
Sbjct: 114 tgctcctgtgcctcgccgccgccgcggcggcgcagctgtcgccgacg 160
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>emb|X56011.1|TAPERO Wheat mRNA for peroxidase
          Length = 1247

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 102 ggcggcgtcggcgcagctgtcgccgac 128
           ||||||||||||||||||||| |||||
Sbjct: 139 ggcggcgtcggcgcagctgtcaccgac 165
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 103      gcggcgtcggcgcagctgtcgccgacg 129
                ||||||||||||||||||||| |||||
Sbjct: 28634986 gcggcgtcggcgcagctgtcggcgacg 28635012



 Score = 46.1 bits (23), Expect = 0.026
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 83       tgctcttgtgcctggccgtggcggcgtcggcgcagctgtcgccgacg 129
                ||||| ||||||| ||||  || ||| ||||||||||||||||||||
Sbjct: 28616031 tgctcctgtgcctcgccgccgccgcggcggcgcagctgtcgccgacg 28616077



 Score = 44.1 bits (22), Expect = 0.10
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 97      gccgtggcggcgtcggcgcagc 118
               ||||||||||||||||||||||
Sbjct: 1302708 gccgtggcggcgtcggcgcagc 1302729
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>gb|AF247700.2|AF247700 Oryza sativa peroxidase POC1 mRNA, complete cds
          Length = 1330

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 103 gcggcgtcggcgcagctgtcgccgacg 129
           ||||||||||||||||||||| |||||
Sbjct: 122 gcggcgtcggcgcagctgtcggcgacg 148
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>dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1167_G06
          Length = 112386

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 103    gcggcgtcggcgcagctgtcgccgacg 129
              ||||||||||||||||||||| |||||
Sbjct: 100944 gcggcgtcggcgcagctgtcggcgacg 100970



 Score = 46.1 bits (23), Expect = 0.026
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 83    tgctcttgtgcctggccgtggcggcgtcggcgcagctgtcgccgacg 129
             ||||| ||||||| ||||  || ||| ||||||||||||||||||||
Sbjct: 81989 tgctcctgtgcctcgccgccgccgcggcggcgcagctgtcgccgacg 82035
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>dbj|AK101772.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033064K15, full
           insert sequence
          Length = 1256

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 83  tgctcttgtgcctggccgtggcggcgtcggcgcagctgtcgccgacg 129
           ||||| ||||||| ||||  || ||| ||||||||||||||||||||
Sbjct: 113 tgctcctgtgcctcgccgccgccgcggcggcgcagctgtcgccgacg 159
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>dbj|AP003757.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1409_C08
          Length = 90673

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 103   gcggcgtcggcgcagctgtcgccgacg 129
             ||||||||||||||||||||| |||||
Sbjct: 10156 gcggcgtcggcgcagctgtcggcgacg 10182
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>tpe|BN000643.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx114 gene
           for class III peroxidase 114 precursor, exons 1-4
          Length = 1547

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 103 gcggcgtcggcgcagctgtcgccgacg 129
           ||||||||||||||||||||| |||||
Sbjct: 52  gcggcgtcggcgcagctgtcggcgacg 78
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>tpe|BN000639.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx110 gene
           for class III peroxidase 110 precursor, exons 1-4
          Length = 1581

 Score = 46.1 bits (23), Expect = 0.026
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 83  tgctcttgtgcctggccgtggcggcgtcggcgcagctgtcgccgacg 129
           ||||| ||||||| ||||  || ||| ||||||||||||||||||||
Sbjct: 26  tgctcctgtgcctcgccgccgccgcggcggcgcagctgtcgccgacg 72
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>ref|XM_476454.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1920

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 97   gccgtggcggcgtcggcgcagc 118
            ||||||||||||||||||||||
Sbjct: 1765 gccgtggcggcgtcggcgcagc 1786
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>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0474G09
          Length = 169511

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 97    gccgtggcggcgtcggcgcagc 118
             ||||||||||||||||||||||
Sbjct: 67543 gccgtggcggcgtcggcgcagc 67564
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>dbj|AK109848.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-F05, full
           insert sequence
          Length = 1440

 Score = 44.1 bits (22), Expect = 0.10
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 97  gccgtggcggcgtcggcgcagc 118
           ||||||||||||||||||||||
Sbjct: 843 gccgtggcggcgtcggcgcagc 864
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 42.1 bits (21), Expect = 0.41
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 46      gaagccatggcctctacttcg 66
               |||||||||||||||||||||
Sbjct: 2267669 gaagccatggcctctacttcg 2267689
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 0.41
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 107    cgtcggcgcagctgtcgccga 127
              |||||||||||||||||||||
Sbjct: 582286 cgtcggcgcagctgtcgccga 582306
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>tpe|BN000659.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx130 gene
           for class III peroxidase 130 precursor, exons 1-4
          Length = 2195

 Score = 42.1 bits (21), Expect = 0.41
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 107 cgtcggcgcagctgtcgccga 127
           |||||||||||||||||||||
Sbjct: 77  cgtcggcgcagctgtcgccga 97
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>gb|AF078872.1|AF078872 Avena sativa cultivar Ogle peroxidase PXC6 precursor (pxc6) gene,
           complete cds
          Length = 1197

 Score = 42.1 bits (21), Expect = 0.41
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 102 ggcggcgtcggcgcagctgtc 122
           |||||||||||||||||||||
Sbjct: 60  ggcggcgtcggcgcagctgtc 80
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>gb|AF078871.1|AF078871 Avena sativa cultivar Ogle peroxidase PXC2 precursor (pxc2) gene,
           complete cds
          Length = 1191

 Score = 42.1 bits (21), Expect = 0.41
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 102 ggcggcgtcggcgcagctgtc 122
           |||||||||||||||||||||
Sbjct: 60  ggcggcgtcggcgcagctgtc 80
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 0.41
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 107    cgtcggcgcagctgtcgccga 127
              |||||||||||||||||||||
Sbjct: 582286 cgtcggcgcagctgtcgccga 582306
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>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from
              chromosome 11 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 181322

 Score = 42.1 bits (21), Expect = 0.41
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 107    cgtcggcgcagctgtcgccga 127
              |||||||||||||||||||||
Sbjct: 160686 cgtcggcgcagctgtcgccga 160666
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>ref|XM_464162.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2323

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 95   tggccgtggcggcgtcggcg 114
            ||||||||||||||||||||
Sbjct: 1469 tggccgtggcggcgtcggcg 1450
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>gb|DQ466088.1| Oryza sativa (japonica cultivar-group) putative stress
            resistance-related protein mRNA, complete cds
          Length = 2232

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 95   tggccgtggcggcgtcggcg 114
            ||||||||||||||||||||
Sbjct: 1369 tggccgtggcggcgtcggcg 1350
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 80      tgttgctcttgtgcctggccgtggcggc 107
               ||||||| |||| |||||||||||||||
Sbjct: 4184911 tgttgctgttgtccctggccgtggcggc 4184938
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>emb|AL360006.15| Human DNA sequence from clone RP11-528D17 on chromosome 1, complete
              sequence
          Length = 113420

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     agaaagaagccatggcctct 60
              ||||||||||||||||||||
Sbjct: 111554 agaaagaagccatggcctct 111573
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>emb|AL356357.22| Human DNA sequence from clone RP4-550F15 on chromosome 1 Contains
           the KCNK1 gene for potassium channel subfamily K member
           1 and one CpG island, complete sequence
          Length = 71371

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 41  agaaagaagccatggcctct 60
           ||||||||||||||||||||
Sbjct: 134 agaaagaagccatggcctct 153
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>gb|AE011999.1| Xanthomonas axonopodis pv. citri str. 306,  section 377 of 469 of the
            complete genome
          Length = 8437

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 80   tgttgctcttgtgcctggccgtggcggc 107
            ||||||| |||| |||||||||||||||
Sbjct: 6646 tgttgctgttgtccctggccgtggcggc 6673
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 95      tggccgtggcggcgtcggcg 114
               ||||||||||||||||||||
Sbjct: 2639908 tggccgtggcggcgtcggcg 2639889
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>dbj|AP005191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0479D12
          Length = 148362

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    tggccgtggcggcgtcggcg 114
             ||||||||||||||||||||
Sbjct: 42130 tggccgtggcggcgtcggcg 42111
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>dbj|AK120401.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088G22, full
            insert sequence
          Length = 2323

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 95   tggccgtggcggcgtcggcg 114
            ||||||||||||||||||||
Sbjct: 1469 tggccgtggcggcgtcggcg 1450
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>gb|AF014468.1|AF014468 Oryza sativa peroxidase (POX8.1) mRNA, complete cds
          Length = 1220

 Score = 40.1 bits (20), Expect = 1.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 110 cggcgcagctgtcgccgacg 129
           ||||||||||||||||||||
Sbjct: 95  cggcgcagctgtcgccgacg 114
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>ref|XM_550613.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1548

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  ggccgtggcggcgtcggcg 114
           |||||||||||||||||||
Sbjct: 57  ggccgtggcggcgtcggcg 75
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>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence
          Length = 136866

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 96     ggccgtggcggcgtcggcg 114
              |||||||||||||||||||
Sbjct: 135606 ggccgtggcggcgtcggcg 135624
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>gb|AC154760.2| Mus musculus BAC clone RP24-414E6 from chromosome 14, complete sequence
          Length = 163089

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 79    gtgttgctcttgtgcctgg 97
             |||||||||||||||||||
Sbjct: 79248 gtgttgctcttgtgcctgg 79230
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 28/31 (90%)
 Strand = Plus / Minus

                                              
Query: 84      gctcttgtgcctggccgtggcggcgtcggcg 114
               |||| |||| |||||||||||||| ||||||
Sbjct: 2931522 gctcatgtggctggccgtggcggcctcggcg 2931492
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 92      gcctggccgtggcggcgtcggcg 114
               |||||||||||||||| ||||||
Sbjct: 3922767 gcctggccgtggcggcatcggcg 3922745
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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 96      ggccgtggcggcgtcggcg 114
               |||||||||||||||||||
Sbjct: 5051311 ggccgtggcggcgtcggcg 5051329
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>ref|XM_502781.1| Yarrowia lipolytica CLIB122, YALI0D13200g predicted mRNA
          Length = 570

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 94  ctggccgtggcggcgtcgg 112
           |||||||||||||||||||
Sbjct: 374 ctggccgtggcggcgtcgg 356
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>gb|AC121341.2| Homo sapiens X BAC RP11-655M17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 177245

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    acgttggctagaaagaagc 50
             |||||||||||||||||||
Sbjct: 25627 acgttggctagaaagaagc 25645
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 96      ggccgtggcggcgtcggcgcagc 118
               ||||||||||||| |||||||||
Sbjct: 3592651 ggccgtggcggcgccggcgcagc 3592673
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>gb|AF413082.1|AF413082 Oryza sativa EPSP synthase mRNA, complete cds
          Length = 1585

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  ggccgtggcggcgtcggcg 114
           |||||||||||||||||||
Sbjct: 57  ggccgtggcggcgtcggcg 75
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>gb|AF413081.1|AF413081 Oryza sativa 5-enolpyruvylshikimate 3-phosphate synthase gene,
           complete cds
          Length = 3661

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 96  ggccgtggcggcgtcggcg 114
           |||||||||||||||||||
Sbjct: 414 ggccgtggcggcgtcggcg 432
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 95      tggccgtggcggcgtcggc 113
               |||||||||||||||||||
Sbjct: 3760459 tggccgtggcggcgtcggc 3760441
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 96      ggccgtggcggcgtcggcg 114
               |||||||||||||||||||
Sbjct: 1815314 ggccgtggcggcgtcggcg 1815332
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>gb|AF546189.1| Contiguous genomic DNA sequence comprising the 19-kDa-zein gene family
             from Zea mays, complete sequence
          Length = 116115

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 93    cctggccgtggcggcgtcg 111
             |||||||||||||||||||
Sbjct: 11331 cctggccgtggcggcgtcg 11313
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>dbj|AP004234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0001H02
          Length = 147160

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 96    ggccgtggcggcgtcggcg 114
             |||||||||||||||||||
Sbjct: 15792 ggccgtggcggcgtcggcg 15810
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>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0679C08
          Length = 156266

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 96     ggccgtggcggcgtcggcg 114
              |||||||||||||||||||
Sbjct: 140463 ggccgtggcggcgtcggcg 140481
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>gb|AY623658.2| Aeromicrobium erythreum putative transcriptional repressor and
            putative dehydrogenase/reductase genes, complete cds;
            erythromycin biosynthesis gene cluster, complete
            sequence; putative oxidoreductase and LipN genes,
            complete cds; monoamine oxidase gene, partial cds; and
            unknown gene
          Length = 61845

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 111  ggcgcagctgtcgccgacg 129
            |||||||||||||||||||
Sbjct: 9249 ggcgcagctgtcgccgacg 9231
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>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 94      ctggccgtggcggcgtcgg 112
               |||||||||||||||||||
Sbjct: 1643538 ctggccgtggcggcgtcgg 1643556
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>emb|AL683894.6| Mouse DNA sequence from clone RP23-109G18 on chromosome 4, complete
              sequence
          Length = 201246

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 36     tggctagaaagaagccatg 54
              |||||||||||||||||||
Sbjct: 138476 tggctagaaagaagccatg 138494
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>dbj|AB052962.1| Oryza sativa EPSPs, rps20 genes for 3-phosphoshikimate
            1-carboxyvinyltransferase, 40S ribosomal protein S20,
            complete cds
          Length = 10601

 Score = 38.2 bits (19), Expect = 6.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 96   ggccgtggcggcgtcggcg 114
            |||||||||||||||||||
Sbjct: 3413 ggccgtggcggcgtcggcg 3431


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 928,982
Number of Sequences: 3902068
Number of extensions: 928982
Number of successful extensions: 71356
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70470
Number of HSP's gapped (non-prelim): 886
length of query: 135
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 114
effective length of database: 17,151,101,840
effective search space: 1955225609760
effective search space used: 1955225609760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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