>ADA2B_MACPR (O19025) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)|
           (Alpha-2B adrenoreceptor) (Fragment)
          Length = 387

 Score = 32.0 bits (71), Expect = 0.90
 Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
 Frame = +2

Query: 14  RIYQSTQEESERGRGKADGRRKEGRRSQASHPPVASSRRAR---ILSPRAVPEGSAGDRG 184
           RIY   +  S R + +A G  +EG   Q    PV +S  AR   + SP AV  G A    
Sbjct: 181 RIYLIAKRSSSRRKPRAKGXPREGESKQPQLRPVGTSVSARPPALTSPLAV-TGEANGHS 239

Query: 185 DPT 193
            PT
Sbjct: 240 KPT 242

>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4|
           (Trithorax homolog 2)
          Length = 2715

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 23/62 (37%), Positives = 29/62 (46%)
 Frame = +2

Query: 23  QSTQEESERGRGKADGRRKEGRRSQASHPPVASSRRARILSPRAVPEGSAGDRGDPTLAG 202
           Q  QEES      A   RK GR      PP+  S+RA   + RA PEG++     P+ A 
Sbjct: 450 QEEQEESPPPVVPATCSRKRGR------PPLTPSQRAEREAARAGPEGTSPPTPTPSTAT 503

Query: 203 DG 208
            G
Sbjct: 504 GG 505

>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell|
           protein 0)
          Length = 532

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
 Frame = +2

Query: 32  QEESERGR---GKADGRRKEGRRSQASHPPVASSRRARILSPRAVPEGSAGDRG---DPT 193
           QE+S   R   G     R+ GRR  A  P    S R R   PR     + GD G   D T
Sbjct: 254 QEDSRPARARPGPPTRGRRRGRRPAAPGPASRRSARLRRRQPRTNSRTNGGDNGEIIDLT 313

Query: 194 LAGDG 208
           L  DG
Sbjct: 314 LDSDG 318

>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0|
          Length = 532

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
 Frame = +2

Query: 32  QEESERGR---GKADGRRKEGRRSQASHPPVASSRRARILSPRAVPEGSAGDRG---DPT 193
           QE+S   R   G     R+ GRR  A  P    S R R   PR     + GD G   D T
Sbjct: 254 QEDSRPARARPGPPTRGRRRGRRPAAPGPASRRSARLRRRQPRTNSRTNGGDNGEIIDLT 313

Query: 194 LAGDG 208
           L  DG
Sbjct: 314 LDSDG 318

>RS12_PARUW (Q6MER6) 30S ribosomal protein S12|
          Length = 126

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 9/94 (9%)
 Frame = -1

Query: 484 PACNRTP--KASCITTHASITEVANVALRKPSWIPTDTASAVTVAECDDG--IPPEAINC 317
           PA  + P  +  C+       +  N ALRK +W+   T   V      +G  +   +I  
Sbjct: 22  PALQKCPQRRGVCLQVKTKTPKKPNSALRKVAWVRLSTGQEVIAYIGGEGHNLQEHSIVL 81

Query: 316 LASQRFS-----LYQVVKNLADCAAAKARSPATS 230
           +   R        Y +V+   DCAA K R    S
Sbjct: 82  VRGGRVKDLPGVRYHIVRGALDCAAVKDRKQGRS 115

>T2R19_RAT (Q9JKU1) Taste receptor type 2 member 19 (T2R19) (Taste receptor|
           type 2 member 1) (T2R1)
          Length = 335

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 380 HCKCCHCG*M**WHPSRSYKLPGIP 306
           HCKCCHC     W  SRS +L  +P
Sbjct: 292 HCKCCHCTRA--WVTSRSPRLSDLP 314

>MN1_HUMAN (Q10571) Probable tumor suppressor protein MN1|
          Length = 1319

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
 Frame = +2

Query: 50   GRGKADGRRKEGRRSQASHPPVASSRR-ARILSPRAVPEGSAGDRGDPTLAGDGRRRG 220
            G G   G    G  S+AS PP   ++     LSP    E ++G+ G P   G GR RG
Sbjct: 888  GPGGPSGTSSSG--SKASGPPNPPAQGDGTSLSPNYTLESTSGNDGKPVSGGGGRGRG 943

>SEC13_PICPA (P53024) Protein transport protein SEC13|
          Length = 289

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 9/50 (18%)
 Frame = +2

Query: 308 GCQAIYSFWR--DAIITF-------SHSDSTCSVCWNPRRLS*CHICNFS 430
           GC  +   WR  DA  TF        HSD    V W+P RLS  +I   S
Sbjct: 169 GCDNLVKIWRYDDAAKTFIEEEAFQGHSDWVRDVAWSPSRLSKSYIATAS 218

>T2R19_MOUSE (Q9JKT2) Taste receptor type 2 member 19 (T2R19)|
          Length = 335

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 380 HCKCCHCG*M**WHPSRSYKLPGIP 306
           HCKCCHC     W  SR+ +L  +P
Sbjct: 292 HCKCCHCARA--WVTSRNPRLSDLP 314

>CWC22_YARLI (Q6C8C5) Pre-mRNA-splicing factor CWC22|
          Length = 954

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +2

Query: 11  RRIYQSTQEESERGRGKADGRRKEGRRSQASHPPVA 118
           +R    T   S R R + DGRRK+G R      P+A
Sbjct: 68  KRRRHRTSRRSRRSRREGDGRRKDGPRGHDDRSPLA 103

>CS029_MOUSE (Q9CS00) Protein C19orf29 homolog|
          Length = 772

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 5/75 (6%)
 Frame = +2

Query: 11  RRIYQSTQEESERGRGK-----ADGRRKEGRRSQASHPPVASSRRARILSPRAVPEGSAG 175
           RR ++  +E   R RG+      + R+K  RRSQ+  PP   S+           + S  
Sbjct: 62  RREHERRRERKRRSRGRRSDSEGEQRQKSRRRSQSLRPPRWHSQN----------QSSCS 111

Query: 176 DRGDPTLAGDGRRRG 220
           D G+    G   R+G
Sbjct: 112 DSGEERAQGSWARKG 126

>HDAC1_STRPU (P56518) Histone deacetylase 1 (HD1)|
          Length = 576

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 14/46 (30%), Positives = 23/46 (50%)
 Frame = +3

Query: 57  EKPTAEGRKEDEARPAILQLLPRAEPESSPLAPYQRAPPEIEETRP 194
           + P  E  KE ++  A  +  P AEP++ P+      PP+  E +P
Sbjct: 452 DSPGKEADKEAKSSDASKEAKPAAEPQAVPMDTTPAPPPKKSEDKP 497

>CJ086_HUMAN (Q9NXX6) Protein C10orf86|
          Length = 385

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +2

Query: 47  RGRGKADGRRKEGRRSQASHPPVASSRRARILSPRAVPEGSAGDRGDPTLAGD 205
           RGRG+   R +   RS++  P    SRR      R  PE  + +  +P+ +GD
Sbjct: 13  RGRGRDPHRDRTRSRSRSRSPLSPRSRRGSARERREAPERPSLEDTEPSDSGD 65

>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2|
            (ALL1-related protein)
          Length = 5262

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +3

Query: 60   KPTAEGRKEDEARPAILQLLPRAE-PESSPLAPYQRAPPEIEETRP 194
            +P  E   E  A P +   LP A  PES+   P  R P E E+TRP
Sbjct: 4656 EPLVELPTEPLAEPPVPSPLPLASSPESARPKPRARPPEEGEDTRP 4701

>RBGPR_RAT (Q5U1Z0) Rab3 GTPase-activating protein non-catalytic subunit (Rab3|
            GTPase-activating protein 150 kDa subunit) (Rab3-GAP
            p150) (Rab3-GAP regulatory subunit) (RAB3-GAP150)
          Length = 1386

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 480  RATEHQKHRASPHMQVSLKLQMWH 409
            R+ EH +H  +PH+Q  + L MW+
Sbjct: 1034 RSIEHLRHILNPHVQNGISLMMWN 1057

>SPT51_ARATH (Q9STN3) Putative transcription elongation factor SPT5 homolog 1|
          Length = 1054

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +2

Query: 23 QSTQEESERGRGKADGRRKEGR 88
          +  +EE ERGRG    RRK GR
Sbjct: 26 EDEEEEEERGRGGGGSRRKRGR 47

>CP19A_ORYLA (Q92087) Cytochrome P450 19A1 (EC 1.14.14.1) (Aromatase) (CYPXIX)|
           (Estrogen synthetase) (P-450AROM)
          Length = 518

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -1

Query: 484 PACNRTPKASCITTHASITEVA-NVALRKPSWIPTDTASAV 365
           PAC+RT  +SC+   A +  +A N  +  PS IP  T S +
Sbjct: 5   PACDRTMSSSCLV--AELVSIAPNTTVGLPSGIPMATRSLI 43

>APXL_HUMAN (Q13796) Apical-like protein (APXL protein)|
          Length = 1616

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +2

Query: 56  GKADGRRKEGRRSQASHPPVASSRRARILSPRAVPEGSAGDR----GDPTLAGDGR 211
           G  +  R+ GR++QA+  P  S  +     PR   +   G R     +P LA  GR
Sbjct: 240 GLWEAPRQGGRQAQAAGDPQGSEEKLSCFPPRVPGDSGKGPRPEYNAEPKLAAPGR 295

>VE2_HPV12 (P36782) Regulatory protein E2|
          Length = 494

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
 Frame = +2

Query: 35  EESERGRGKADGRRKEGRRSQASHPPVASSR------RARILSPRAV 157
           +  ERGRG+  GR K   RS ++ P    SR      R R +SP  V
Sbjct: 340 QRGERGRGERGGRGKRRDRSSSTSPTPKRSRAGSRSSRQRGVSPEQV 386

>JERKY_HUMAN (O75564) Jerky protein homolog|
          Length = 520

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +2

Query: 83  GRRSQASHPPVASSRRARILSPRAVPEGSAGDRGDP 190
           GR ++   PP A+S    + S    P+     RGDP
Sbjct: 396 GREAEGGRPPAATSPAEVVWSSEKTPKADQDGRGDP 431

>REN3A_HUMAN (Q9H1J1) Regulator of nonsense transcripts 3A (Nonsense mRNA|
           reducing factor 3A) (Up-frameshift suppressor 3 homolog
           A) (hUpf3)
          Length = 476

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 20/58 (34%), Positives = 29/58 (50%)
 Frame = +2

Query: 11  RRIYQSTQEESERGRGKADGRRKEGRRSQASHPPVASSRRARILSPRAVPEGSAGDRG 184
           R + +S ++ESE  R   D    +GRR +A H P   SRR+     +   +G   DRG
Sbjct: 346 RDVERSQEQESEAQRYHVD----DGRRHRAHHEPERLSRRSE--DEQRWGKGPGQDRG 397

>CWF14_SCHPO (O74772) Cell cycle control protein cwf14|
          Length = 146

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -3

Query: 437 KYH*SCKCGTTKAFLDSNRHCKCCHCG 357
           K+  +C C   K+ LD ++  +C HCG
Sbjct: 112 KFGSTCICRVPKSKLDKDQRVRCTHCG 138

>PRP46_YARLI (Q6C709) Pre-mRNA-splicing factor PRP46 (Pre-mRNA-processing|
           protein 46)
          Length = 472

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 14/27 (51%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = -1

Query: 469 TPKASCITTHASITEV-ANVALRKPSW 392
           TP AS  TTH S+T + AN+   KP+W
Sbjct: 123 TPSASQPTTHDSLTNLGANLTQSKPAW 149

>HNRPR_HUMAN (O43390) Heterogeneous nuclear ribonucleoprotein R (hnRNP R)|
          Length = 633

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
 Frame = +2

Query: 53  RGKADGRRKEGR----RSQASHPPVASSRRARILSPRAVPEGSAGDRGDPTLAGDGR 211
           RG+  GR   G     R + + PP   +  ++  +P   P GS G RG P     GR
Sbjct: 500 RGRGGGRGGRGAPPPPRGRGAPPPRGRAGYSQRGAPLGPPRGSRGGRGGPAQQQRGR 556


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,053,140
Number of Sequences: 219361
Number of extensions: 926764
Number of successful extensions: 4892
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4865
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)