ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet113a05 |
|---|---|
| Clone Library Name | barley_pub |
>FENR1_ORYSA (P41344) Ferredoxin--NADP reductase, leaf isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 362 Score = 100 bits (250), Expect = 2e-21 Identities = 50/93 (53%), Positives = 57/93 (61%), Gaps = 5/93 (5%) Frame = +1 Query: 223 SHCSFPSAARTAVSRRGALAIRAQAISTDAA-----PXXXXXXXXXXXXXXXTNTFRPKE 387 +HC P RT + + L +RAQ +TDAA P TN +RPKE Sbjct: 25 AHCFLPCPPRTRAAHQRGLLLRAQVSTTDAAAVAAAPAKKEKISKKHDEGVVTNKYRPKE 84 Query: 388 PYVGKCLLNTKITADDAPGETWHMVFLTEGAVP 486 PYVGKCLLNTKITADDAPGETWHMVF TEG +P Sbjct: 85 PYVGKCLLNTKITADDAPGETWHMVFSTEGEIP 117
>FENR1_TOBAC (O04977) Ferredoxin--NADP reductase, leaf-type isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 362 Score = 84.0 bits (206), Expect = 2e-16 Identities = 42/70 (60%), Positives = 45/70 (64%) Frame = +1 Query: 277 LAIRAQAISTDAAPXXXXXXXXXXXXXXXTNTFRPKEPYVGKCLLNTKITADDAPGETWH 456 ++IRAQ T AP N FRPKEPYVG+CLLNTKIT DDAPGETWH Sbjct: 50 VSIRAQV--TTEAPAKVEKISKKQDEGVIVNKFRPKEPYVGRCLLNTKITGDDAPGETWH 107 Query: 457 MVFLTEGAVP 486 MVF TEG VP Sbjct: 108 MVFSTEGEVP 117
>FENR1_PEA (P10933) Ferredoxin--NADP reductase, leaf isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 360 Score = 82.0 bits (201), Expect = 8e-16 Identities = 41/68 (60%), Positives = 43/68 (63%) Frame = +1 Query: 283 IRAQAISTDAAPXXXXXXXXXXXXXXXTNTFRPKEPYVGKCLLNTKITADDAPGETWHMV 462 IRAQ T AP N F+PKEPYVG+CLLNTKIT DDAPGETWHMV Sbjct: 50 IRAQV--TTEAPAKVVKHSKKQDENIVVNKFKPKEPYVGRCLLNTKITGDDAPGETWHMV 107 Query: 463 FLTEGAVP 486 F TEG VP Sbjct: 108 FSTEGEVP 115
>FENR_VICFA (P41346) Ferredoxin--NADP reductase, chloroplast precursor (EC| 1.18.1.2) (FNR) Length = 363 Score = 80.9 bits (198), Expect = 2e-15 Identities = 44/86 (51%), Positives = 50/86 (58%), Gaps = 2/86 (2%) Frame = +1 Query: 235 FPSAARTAVSRRGALA-IRAQAISTDAAPXXXXXXXXXXXXXXXT-NTFRPKEPYVGKCL 408 F + +VS G + IRAQ + AP N F+PKEPYVG+CL Sbjct: 33 FKKVSLNSVSISGRVGTIRAQITTEAEAPVTKVVKHSKKQDEGIVVNKFKPKEPYVGRCL 92 Query: 409 LNTKITADDAPGETWHMVFLTEGAVP 486 LNTKIT DDAPGETWHMVF TEG VP Sbjct: 93 LNTKITGDDAPGETWHMVFTTEGEVP 118
>FENR_SPIOL (P00455) Ferredoxin--NADP reductase, chloroplast precursor (EC| 1.18.1.2) (FNR) Length = 369 Score = 75.1 bits (183), Expect = 9e-14 Identities = 41/81 (50%), Positives = 45/81 (55%), Gaps = 5/81 (6%) Frame = +1 Query: 259 VSRRGALA-IRAQAIST----DAAPXXXXXXXXXXXXXXXTNTFRPKEPYVGKCLLNTKI 423 VS G + IRAQ S AP N F+PK PYVG+CLLNTKI Sbjct: 44 VSATGKMGPIRAQIASDVEAPPPAPAKVEKHSKKMEEGITVNKFKPKTPYVGRCLLNTKI 103 Query: 424 TADDAPGETWHMVFLTEGAVP 486 T DDAPGETWHMVF EG +P Sbjct: 104 TGDDAPGETWHMVFSHEGEIP 124
>FENR_MESCR (P41343) Ferredoxin--NADP reductase, chloroplast precursor (EC| 1.18.1.2) (FNR) Length = 365 Score = 73.2 bits (178), Expect = 4e-13 Identities = 34/68 (50%), Positives = 39/68 (57%) Frame = +1 Query: 283 IRAQAISTDAAPXXXXXXXXXXXXXXXTNTFRPKEPYVGKCLLNTKITADDAPGETWHMV 462 IRA A +A N ++PK PY G+CLLNTKIT DDAPGETWHMV Sbjct: 53 IRAVASDVEAPVAKVEKHSKKMEEGVIVNKYKPKNPYTGRCLLNTKITGDDAPGETWHMV 112 Query: 463 FLTEGAVP 486 F EG +P Sbjct: 113 FSHEGEIP 120
>FENR_CYAPA (Q00598) Ferredoxin--NADP reductase, cyanelle precursor (EC| 1.18.1.2) (FNR) Length = 363 Score = 55.5 bits (132), Expect = 8e-08 Identities = 22/40 (55%), Positives = 28/40 (70%) Frame = +1 Query: 367 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFLTEGAVP 486 N FRP PY+GKC+ N +I + APGET H++F EG VP Sbjct: 79 NLFRPANPYIGKCIYNERIVGEGAPGETKHIIFTHEGKVP 118
>FENR_SPISP (P00454) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 294 Score = 39.3 bits (90), Expect = 0.006 Identities = 14/37 (37%), Positives = 22/37 (59%) Frame = +1 Query: 367 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFLTEG 477 N ++PK PY+GKCL N ++ + G H++F G Sbjct: 8 NIYKPKNPYIGKCLSNEELVREGGTGTVRHLIFDISG 44
>FENR2_ORYSA (P41345) Ferredoxin--NADP reductase, root isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 378 Score = 38.9 bits (89), Expect = 0.007 Identities = 18/40 (45%), Positives = 23/40 (57%) Frame = +1 Query: 367 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFLTEGAVP 486 NT++PKEPY + +I APGET H+V G VP Sbjct: 88 NTYKPKEPYTATIVSVERIVGPKAPGETCHIVIDHGGNVP 127
>FENR2_PEA (Q41014) Ferredoxin--NADP reductase, root isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 377 Score = 36.2 bits (82), Expect = 0.048 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = +1 Query: 367 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFLTEGAVP 486 N +PKEPY + ++ APGET H+V +G VP Sbjct: 87 NLHKPKEPYTATIVSVERLVGPKAPGETCHIVINHDGNVP 126
>FENR_CHLRE (P53991) Ferredoxin--NADP reductase, chloroplast precursor (EC| 1.18.1.2) (FNR) Length = 354 Score = 36.2 bits (82), Expect = 0.048 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = +1 Query: 367 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFLTEGAVP 486 NT+ K P+ K KIT A GET H++ TEG +P Sbjct: 64 NTYSNKAPFKAKVRSVEKITGPKATGETCHIIIETEGKIP 103
>FENR2_TOBAC (O04397) Ferredoxin--NADP reductase, root-type isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 375 Score = 36.2 bits (82), Expect = 0.048 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = +1 Query: 367 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFLTEGAVP 486 N ++PKEPY + ++ APGET H+V +G +P Sbjct: 86 NIYKPKEPYTATIVSVERLVGPKAPGETCHIVIDHDGNLP 125
>FENR3_ORYSA (O23877) Ferredoxin--NADP reductase, embryo isozyme, chloroplast| precursor (EC 1.18.1.2) (FNR) Length = 378 Score = 35.8 bits (81), Expect = 0.063 Identities = 16/40 (40%), Positives = 22/40 (55%) Frame = +1 Query: 367 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFLTEGAVP 486 N ++PKEPY + ++ APGET H+V G VP Sbjct: 88 NLYKPKEPYTATIVSVERLVGPKAPGETCHIVIDHGGNVP 127
>FENR_SYNP2 (P31973) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 402 Score = 34.7 bits (78), Expect = 0.14 Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%) Frame = +1 Query: 367 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVF-LTEG 477 N +RPK P++GKC+ N ++ + G H+ F ++EG Sbjct: 115 NIYRPKTPFLGKCIENYELVDEGGSGTVRHVTFDISEG 152
>FENR_SYNY3 (Q55318) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 413 Score = 34.3 bits (77), Expect = 0.18 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +1 Query: 367 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVF 465 N +RPK PY+GK L N + + A G H+ F Sbjct: 128 NIYRPKTPYIGKVLENYPLVREGAIGTVQHLTF 160
>FENR_SYNEL (Q93RE3) Ferredoxin--NADP reductase (EC 1.18.1.2) (FNR)| Length = 386 Score = 30.0 bits (66), Expect = 3.5 Identities = 11/37 (29%), Positives = 19/37 (51%) Frame = +1 Query: 367 NTFRPKEPYVGKCLLNTKITADDAPGETWHMVFLTEG 477 N +RP P +GK + N ++ + G H++F G Sbjct: 99 NIYRPNNPCIGKVISNEELVREGGEGTVKHIIFDISG 135
>RM35_DROME (Q8MS27) 39S ribosomal protein L35, mitochondrial precursor (L35mt)| Length = 178 Score = 29.6 bits (65), Expect = 4.5 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = -1 Query: 473 SVRKTMCHVSPGASSAVILVLSRHLPTYGSLGRNVLVTTPS 351 S +++C SP ASS V LV T +L R L+ TPS Sbjct: 8 SALRSVCRQSPAASSLVPLVQRTQRATLMTLSRPCLLPTPS 48
>POLS2_MOUSE (Q5K2P8) Polyserase-2 precursor (EC 3.4.21.-) (Polyserine protease| 2) (Protease serine 36) Length = 849 Score = 28.9 bits (63), Expect = 7.7 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -1 Query: 398 PTYGSLGRNVLVTTPSSCFLDTFFSF 321 P YG+L + V P+SCFLD+ F Sbjct: 347 PCYGALVSDSWVLAPASCFLDSLHDF 372 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,895,138 Number of Sequences: 219361 Number of extensions: 489900 Number of successful extensions: 1302 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 1273 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1301 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
