ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet112g12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF218305.1|AF218305 Hordeum vulgare chlorophyll a/b binding p... 749 0.0
2gb|S68728.1| LHC Ib-21=light-harvesting complex I [Hordeum vulga... 480 e-132
3gb|AY106149.1| Zea mays PCO102434 mRNA sequence 365 8e-98
4dbj|AK098864.1| Oryza sativa (japonica cultivar-group) cDNA clon... 323 3e-85
5dbj|AK060904.1| Oryza sativa (japonica cultivar-group) cDNA clon... 323 3e-85
6dbj|AK060800.1| Oryza sativa (japonica cultivar-group) cDNA clon... 323 3e-85
7gb|AF094776.1|AF094776 Oryza sativa chlorophyll a/b-binding prot... 315 6e-83
8dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 151 2e-33
9dbj|AP003511.3| Oryza sativa (japonica cultivar-group) genomic D... 151 2e-33
10gb|AY104104.1| Zea mays PCO079073 mRNA sequence 52 0.001
11gb|AY347803.1| Malus x domestica clone 8-2 chlorophyll a/b-bindi... 50 0.006
12dbj|AB122115.1| Chlamydomonas reinhardtii LhcI-2 gene for light-... 46 0.091
13dbj|AB122118.1| Chlamydomonas reinhardtii LhcI-5 gene for light-... 44 0.36
14emb|AL117328.5|HSA494O16 Human DNA sequence from clone RP11-494O... 42 1.4
15gb|CP000088.1| Thermobifida fusca YX, complete genome 42 1.4
16ref|XM_631624.1| Dictyostelium discoideum AX4 hypothetical prote... 42 1.4
17gb|AC164112.2| Mus musculus BAC clone RP23-266E12 from chromosom... 42 1.4
18gb|AC154201.2| Mus musculus BAC clone RP24-83I8 from chromosome ... 42 1.4
19gb|AF165214.1|AF165214 Bacteriophage D3, complete genome 42 1.4
20emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll ... 42 1.4
21ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) ... 42 1.4
22gb|AY495827.1| Oryctolagus cuniculus clone 179L1 kappa 1 light c... 42 1.4
23dbj|AB019440.1| Homo sapiens DNA for immunoglobulin heavy-chain ... 42 1.4
24gb|AC149531.2| Xenopus tropicalis clone ISB-331C21, complete seq... 40 5.6
25gb|AC101277.16| Mus musculus chromosome 1, clone RP23-101P2, com... 40 5.6
26gb|AC160526.13| Mus musculus chromosome 8, clone RP24-191C23, co... 40 5.6
27ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.6
28ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.6
29ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.6
30ref|XM_478841.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.6
31ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.6
32ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.6
33ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.6
34ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.6
35gb|AF154570.2| Mus musculus fibroblast growth factor receptor 1 ... 40 5.6
36gb|AC115341.6| Rattus norvegicus 3 BAC CH230-248O1 (Children's H... 40 5.6
37gb|AY331258.1| Sphingomonas paucimobilis ORFA (orfA), ORFB (orfB... 40 5.6
38gb|BC096514.1| Xenopus tropicalis c6.1a protein, mRNA (cDNA clon... 40 5.6
39gb|AC183614.3| Pan troglodytes BAC clone CH251-186N21 from chrom... 40 5.6
40gb|AC142208.3| Homo sapiens chromosome 16 clone XXfos-89260C6, c... 40 5.6
41ref|XM_823936.1| Trypanosoma brucei TREU927 hypothetical protein... 40 5.6
42gb|AC037471.12| Homo sapiens chromosome 15, clone RP11-810K23, c... 40 5.6
43gb|AY163380.1| Zea mays putative ROP family GTPase ROP6 gene, co... 40 5.6
44gb|AC127381.4| Homo sapiens BAC clone RP11-1360M22 from UL, comp... 40 5.6
45gb|AC087386.7| Homo sapiens chromosome 15, clone RP11-173D3, com... 40 5.6
46emb|AJ245628.1|HSA245628 Homo sapiens EVN gene for pre-pro-enovin 40 5.6
47emb|AL357079.24| Human DNA sequence from clone RP11-7O11 on chro... 40 5.6
48gb|AC069113.9| Homo sapiens chromosome 8, clone RP11-597M17, com... 40 5.6
49gb|AF276759.4| Homo sapiens chromosome 8 clone RP11-420F14 map p... 40 5.6
50ref|NM_001016457.2| Xenopus tropicalis c6.1a protein (c6.1a), mRNA 40 5.6
51emb|AJ278665.1|ZMA278665 Zea mays mRNA for putative Rop family G... 40 5.6
52gb|AC021585.7| Homo sapiens chromosome , clone RP11-96F3, comple... 40 5.6
53gb|AC149383.2| Phakopsora pachyrhizi clone JGIAFNA-5A9, complete... 40 5.6
54gb|AC149146.3| Xenopus tropicalis clone ISB-156G23, complete seq... 40 5.6
55gb|AY125979.1| Zea mays hexokinase mRNA, complete cds 40 5.6
56emb|Z17226.1|PSLHCA411 Pinus sylvestris Lhca4*1-1 gene encoding ... 40 5.6
57gb|AF279892.1| Rattus norvegicus 7-dehydrocholesterol reductase ... 40 5.6
58dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.6
59gb|AF349018.1|F349018S01 Homo sapiens topoisomerase I gene, exon... 40 5.6
60gb|AC104835.3| Homo sapiens chromosome 3 clone RP11-27J5, comple... 40 5.6
61gb|AC015917.30| Homo sapiens chromosome 17, clone CTD-2350C19, c... 40 5.6
62gb|AC005038.5|AC005038 Homo sapiens BAC clone RP11-486I22 from 1... 40 5.6
63gb|AC140838.3| Homo sapiens chromosome 16 clone XXfos-84069G6, c... 40 5.6
64dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
65gb|AC140540.3| Homo sapiens chromosome 16 clone XXfos-88730H2, c... 40 5.6
66gb|AC105118.23| Homo sapiens chromosome 8, clone RP11-909N17, co... 40 5.6
67gb|AC087793.17| Homo sapiens chromosome 8, clone RP5-1118A7, com... 40 5.6
68dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.6
69gb|AC135263.5| Homo sapiens chromosome 15, clone RP13-381O4, com... 40 5.6
70dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
71gb|DQ163915.1| Bacteriophage PA11, complete genome 40 5.6
72dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.6
73dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
74emb|X64198.1|NTLHC1R N.tabacum LHC-I mRNA for photosystem I ligh... 40 5.6
75emb|Z16409.1|PSLHCA412 P.sylvestris Lhca4*1-2 mRNA encoding Lhca... 40 5.6
76emb|X71965.1|CSCAB2MR C.stellata cab2 mRNA for light harvesting ... 40 5.6
77dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
78dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
79dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
80dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
81dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
82dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
83dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
84dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
85dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
86gb|AY106111.1| Zea mays PCO074668 mRNA sequence 40 5.6
87emb|CR760965.2| Xenopus tropicalis finished cDNA, clone TEgg028n11 40 5.6
88gb|AF115765.1|AF115765 Homo sapiens Artemin gene, alternative fo... 40 5.6
89gb|AC005726.1|AC005726 Homo sapiens chromosome 17, clone hRPK.1... 40 5.6
90gb|AF010321.1|AF010321 Oryza sativa photosystem I antenna protei... 40 5.6
91emb|Y11740.1|HSY11740 H.sapiens whn gene, exon 1a and 1b 40 5.6 
>gb|AF218305.1|AF218305 Hordeum vulgare chlorophyll a/b binding protein precursor (lhca1)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 784

 Score =  749 bits (378), Expect = 0.0
 Identities = 378/378 (100%)
 Strand = Plus / Plus

                                                                       
Query: 43  ccgcgcagcaaggagcagccagcatcgagagagcagcaatggctatggcgtcgtcaagcg 102
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   ccgcgcagcaaggagcagccagcatcgagagagcagcaatggctatggcgtcgtcaagcg 62

                                                                       
Query: 103 ggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtcccggtccg 162
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63  ggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtcccggtccg 122

                                                                       
Query: 163 gccgctccggactgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccg 222
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gccgctccggactgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccg 182

                                                                       
Query: 223 ccgagtggttccccggccagccccgccccgcccatctggacggctcctcgccaggggact 282
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ccgagtggttccccggccagccccgccccgcccatctggacggctcctcgccaggggact 242

                                                                       
Query: 283 tcgggttcgaccccctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagt 342
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 tcgggttcgaccccctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagt 302

                                                                       
Query: 343 ccgagatctaccactgccgctgggccatgctctgcgtgccaggggtgctggtgccggagg 402
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ccgagatctaccactgccgctgggccatgctctgcgtgccaggggtgctggtgccggagg 362

                             
Query: 403 cgctggggctgggcaact 420
           ||||||||||||||||||
Sbjct: 363 cgctggggctgggcaact 380
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>gb|S68728.1| LHC Ib-21=light-harvesting complex I [Hordeum vulgare=barley,
           Prato, mRNA Chloroplast, 878 nt]
          Length = 878

 Score =  480 bits (242), Expect = e-132
 Identities = 259/262 (98%), Gaps = 2/262 (0%)
 Strand = Plus / Plus

                                                                       
Query: 160 ccggccgctccggactgccgttctgcgcctacgccaccacctccggccgcgtcaccatgt 219
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   ccggccgctccggactgccgttctgcgcctacgccaccacctccggccgcgtcaccatgt 61

                                                                       
Query: 220 ccgccgagtggttccccggccagccccgccccgcccatctggacggctcctcgcca-ggg 278
           |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 62  ccgccgagtggttccccggccagccccgccccgcccatctggccggctcctcgccaaggg 121

                                                                       
Query: 279 gacttcgggttcgaccccctgggcctcgccaccgtgccggagaacttcgagcggttcaag 338
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gacttcgggttcgacccc-tgggcctcgccaccgtgccggagaacttcgagcggttcaag 180

                                                                       
Query: 339 gagtccgagatctaccactgccgctgggccatgctctgcgtgccaggggtgctggtgccg 398
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagtccgagatctaccactgccgctgggccatgctctgcgtgccaggggtgctggtgccg 240

                                 
Query: 399 gaggcgctggggctgggcaact 420
           ||||||||||||||||||||||
Sbjct: 241 gaggcgctggggctgggcaact 262
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>gb|AY106149.1| Zea mays PCO102434 mRNA sequence
          Length = 1081

 Score =  365 bits (184), Expect = 8e-98
 Identities = 308/347 (88%), Gaps = 3/347 (0%)
 Strand = Plus / Plus

                                                                       
Query: 74  agcagcaatggctatggcgtcgtcaagcgggctcaggagctgcagcgccgtgggcgtgcc 133
           |||||||||||  ||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 58  agcagcaatggtgatggcgtcgtcgagcgggctgaggagctgcagcgccgtgggcgtgcc 117

                                                                       
Query: 134 gagcctgctggcgccttcgtcccggtccggccgctccggactgccgttctgcgcctacgc 193
            |||||||||||||| ||||||||||||||||||  | | | ||||||||||||| ||||
Sbjct: 118 cagcctgctggcgccgtcgtcccggtccggccgc--ctggc-gccgttctgcgccaacgc 174

                                                                       
Query: 194 caccacctccggccgcgtcaccatgtccgccgagtggttccccggccagccccgccccgc 253
           ||||||||| |||||||||||||||||||| |||||| | ||||||||||| ||||| ||
Sbjct: 175 caccacctctggccgcgtcaccatgtccgcggagtggatgcccggccagccacgccctgc 234

                                                                       
Query: 254 ccatctggacggctcctcgccaggggacttcgggttcgaccccctgggcctcgccaccgt 313
           ||| || ||||||||||| || ||||||||||| ||||| || ||||||||||| |||||
Sbjct: 235 ccacctcgacggctcctctcccggggacttcggcttcgatccgctgggcctcgcgaccgt 294

                                                                       
Query: 314 gccggagaacttcgagcggttcaaggagtccgagatctaccactgccgctgggccatgct 373
           |||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||||
Sbjct: 295 gccggagaacttcgagcggttcaaggagtcagaggtgtaccactgccgctgggccatgct 354

                                                          
Query: 374 ctgcgtgccaggggtgctggtgccggaggcgctggggctgggcaact 420
              ||| || ||| | ||||||||||| || ||||| ||||||||||
Sbjct: 355 tgccgtccccgggatcctggtgccggaagctctgggcctgggcaact 401
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>dbj|AK098864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A03, full
           insert sequence
          Length = 1046

 Score =  323 bits (163), Expect = 3e-85
 Identities = 226/247 (91%)
 Strand = Plus / Plus

                                                                       
Query: 174 ctgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccgccgagtggttc 233
           |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | 
Sbjct: 164 ctgccggtctgcgcctacgccaccacctccgggcgcgtcaccatgtccgccgagtggatg 223

                                                                       
Query: 234 cccggccagccccgccccgcccatctggacggctcctcgccaggggacttcgggttcgac 293
           || |||||||| ||||||||||| || ||||||||||| || || |||||||||||||||
Sbjct: 224 ccgggccagccacgccccgcccacctcgacggctcctctcccggtgacttcgggttcgac 283

                                                                       
Query: 294 cccctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtccgagatctac 353
           || ||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||
Sbjct: 284 ccgctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtcggaggtgtac 343

                                                                       
Query: 354 cactgccgctgggccatgctctgcgtgccaggggtgctggtgccggaggcgctggggctg 413
           |||||||| ||||||||||||   ||||| |||||| |||||||||||||||||||||||
Sbjct: 344 cactgccggtgggccatgctcgctgtgcctggggtgttggtgccggaggcgctggggctg 403

                  
Query: 414 ggcaact 420
           |||||||
Sbjct: 404 ggcaact 410



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                   
Query: 99  agcgggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtc 154
           |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 95  agcgggctgaggagctgcagcgcggtgggcgtgccgagcctgctggcgccgtcgtc 150
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>dbj|AK060904.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E07, full
           insert sequence
          Length = 1051

 Score =  323 bits (163), Expect = 3e-85
 Identities = 226/247 (91%)
 Strand = Plus / Plus

                                                                       
Query: 174 ctgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccgccgagtggttc 233
           |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | 
Sbjct: 169 ctgccggtctgcgcctacgccaccacctccgggcgcgtcaccatgtccgccgagtggatg 228

                                                                       
Query: 234 cccggccagccccgccccgcccatctggacggctcctcgccaggggacttcgggttcgac 293
           || |||||||| ||||||||||| || ||||||||||| || || |||||||||||||||
Sbjct: 229 ccgggccagccacgccccgcccacctcgacggctcctctcccggtgacttcgggttcgac 288

                                                                       
Query: 294 cccctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtccgagatctac 353
           || ||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||
Sbjct: 289 ccgctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtcggaggtgtac 348

                                                                       
Query: 354 cactgccgctgggccatgctctgcgtgccaggggtgctggtgccggaggcgctggggctg 413
           |||||||| ||||||||||||   ||||| |||||| |||||||||||||||||||||||
Sbjct: 349 cactgccggtgggccatgctcgctgtgcctggggtgttggtgccggaggcgctggggctg 408

                  
Query: 414 ggcaact 420
           |||||||
Sbjct: 409 ggcaact 415



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                   
Query: 99  agcgggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtc 154
           |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 100 agcgggctgaggagctgcagcgcggtgggcgtgccgagcctgctggcgccgtcgtc 155
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>dbj|AK060800.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-F04, full
           insert sequence
          Length = 1958

 Score =  323 bits (163), Expect = 3e-85
 Identities = 226/247 (91%)
 Strand = Plus / Plus

                                                                       
Query: 174 ctgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccgccgagtggttc 233
           |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | 
Sbjct: 166 ctgccggtctgcgcctacgccaccacctccgggcgcgtcaccatgtccgccgagtggatg 225

                                                                       
Query: 234 cccggccagccccgccccgcccatctggacggctcctcgccaggggacttcgggttcgac 293
           || |||||||| ||||||||||| || ||||||||||| || || |||||||||||||||
Sbjct: 226 ccgggccagccacgccccgcccacctcgacggctcctctcccggtgacttcgggttcgac 285

                                                                       
Query: 294 cccctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtccgagatctac 353
           || ||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||
Sbjct: 286 ccgctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtcggaggtgtac 345

                                                                       
Query: 354 cactgccgctgggccatgctctgcgtgccaggggtgctggtgccggaggcgctggggctg 413
           |||||||| ||||||||||||   ||||| |||||| |||||||||||||||||||||||
Sbjct: 346 cactgccggtgggccatgctcgctgtgcctggggtgttggtgccggaggcgctggggctg 405

                  
Query: 414 ggcaact 420
           |||||||
Sbjct: 406 ggcaact 412



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                   
Query: 99  agcgggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtc 154
           |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 97  agcgggctgaggagctgcagcgcggtgggcgtgccgagcctgctggcgccgtcgtc 152
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>gb|AF094776.1|AF094776 Oryza sativa chlorophyll a/b-binding protein precursor (Cab26)
           mRNA, nuclear gene encoding chloroplast protein,
           complete cds
          Length = 1050

 Score =  315 bits (159), Expect = 6e-83
 Identities = 225/247 (91%)
 Strand = Plus / Plus

                                                                       
Query: 174 ctgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccgccgagtggttc 233
           |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | 
Sbjct: 149 ctgccggtctgcgcctacgccaccacctccgggcgcgtcaccatgtccgccgagtggatg 208

                                                                       
Query: 234 cccggccagccccgccccgcccatctggacggctcctcgccaggggacttcgggttcgac 293
           || |||||||| ||||||||||| || ||||||||||| || || |||||||||||||||
Sbjct: 209 ccgggccagccacgccccgcccacctcgacggctcctctcccggtgacttcgggttcgac 268

                                                                       
Query: 294 cccctgggcctcgccaccgtgccggagaacttcgagcggttcaaggagtccgagatctac 353
           || |||||||| |||||||||||||||||||||||||||||||||||||| ||| | |||
Sbjct: 269 ccgctgggccttgccaccgtgccggagaacttcgagcggttcaaggagtcggaggtgtac 328

                                                                       
Query: 354 cactgccgctgggccatgctctgcgtgccaggggtgctggtgccggaggcgctggggctg 413
           |||||||| ||||||||||||   ||||| |||||| |||||||||||||||||||||||
Sbjct: 329 cactgccggtgggccatgctcgctgtgcctggggtgttggtgccggaggcgctggggctg 388

                  
Query: 414 ggcaact 420
           |||||||
Sbjct: 389 ggcaact 395



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                   
Query: 99  agcgggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtc 154
           |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 80  agcgggctgaggagctgcagcgcggtgggcgtgccgagcctgctggcgccgtcgtc 135
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  151 bits (76), Expect = 2e-33
 Identities = 91/96 (94%)
 Strand = Plus / Plus

                                                                            
Query: 279      gacttcgggttcgaccccctgggcctcgccaccgtgccggagaacttcgagcggttcaag 338
                ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12295875 gacttcgggttcgacccgctgggcctcgccaccgtgccggagaacttcgagcggttcaag 12295934

                                                    
Query: 339      gagtccgagatctaccactgccgctgggccatgctc 374
                ||||| ||| | ||||||||||| ||||||||||||
Sbjct: 12295935 gagtcggaggtgtaccactgccggtgggccatgctc 12295970



 Score =  131 bits (66), Expect = 2e-27
 Identities = 90/98 (91%)
 Strand = Plus / Plus

                                                                            
Query: 174      ctgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccgccgagtggttc 233
                |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | 
Sbjct: 12295670 ctgccggtctgcgcctacgccaccacctccgggcgcgtcaccatgtccgccgagtggatg 12295729

                                                      
Query: 234      cccggccagccccgccccgcccatctggacggctcctc 271
                || |||||||| ||||||||||| || |||||||||||
Sbjct: 12295730 ccgggccagccacgccccgcccacctcgacggctcctc 12295767



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                        
Query: 99       agcgggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtc 154
                |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 12295601 agcgggctgaggagctgcagcgcggtgggcgtgccgagcctgctggcgccgtcgtc 12295656



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                     
Query: 384      ggggtgctggtgccggaggcgctggggctgggcaact 420
                |||||| ||||||||||||||||||||||||||||||
Sbjct: 12296064 ggggtgttggtgccggaggcgctggggctgggcaact 12296100
to top
>dbj|AP003511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0578B12
          Length = 151192

 Score =  151 bits (76), Expect = 2e-33
 Identities = 91/96 (94%)
 Strand = Plus / Plus

                                                                         
Query: 279   gacttcgggttcgaccccctgggcctcgccaccgtgccggagaacttcgagcggttcaag 338
             ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12335 gacttcgggttcgacccgctgggcctcgccaccgtgccggagaacttcgagcggttcaag 12394

                                                 
Query: 339   gagtccgagatctaccactgccgctgggccatgctc 374
             ||||| ||| | ||||||||||| ||||||||||||
Sbjct: 12395 gagtcggaggtgtaccactgccggtgggccatgctc 12430



 Score =  131 bits (66), Expect = 2e-27
 Identities = 90/98 (91%)
 Strand = Plus / Plus

                                                                         
Query: 174   ctgccgttctgcgcctacgccaccacctccggccgcgtcaccatgtccgccgagtggttc 233
             |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| | 
Sbjct: 12130 ctgccggtctgcgcctacgccaccacctccgggcgcgtcaccatgtccgccgagtggatg 12189

                                                   
Query: 234   cccggccagccccgccccgcccatctggacggctcctc 271
             || |||||||| ||||||||||| || |||||||||||
Sbjct: 12190 ccgggccagccacgccccgcccacctcgacggctcctc 12227



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 53/56 (94%)
 Strand = Plus / Plus

                                                                     
Query: 99    agcgggctcaggagctgcagcgccgtgggcgtgccgagcctgctggcgccttcgtc 154
             |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 12061 agcgggctgaggagctgcagcgcggtgggcgtgccgagcctgctggcgccgtcgtc 12116



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                  
Query: 384   ggggtgctggtgccggaggcgctggggctgggcaact 420
             |||||| ||||||||||||||||||||||||||||||
Sbjct: 12524 ggggtgttggtgccggaggcgctggggctgggcaact 12560
to top
>gb|AY104104.1| Zea mays PCO079073 mRNA sequence
          Length = 867

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 273 ccaggggacttcgggttcgaccccctgggcctcg 306
           ||||| |||||||| |||||||||||||||||||
Sbjct: 313 ccaggtgacttcggcttcgaccccctgggcctcg 346
to top
>gb|AY347803.1| Malus x domestica clone 8-2 chlorophyll a/b-binding protein type I
           mRNA, partial cds; nuclear gene for chloroplast product
          Length = 462

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 214 ccatgtccgccgagtggttccccggccagccccgccc 250
           ||||||||||||||||| | |||||| ||||||||||
Sbjct: 158 ccatgtccgccgagtggatgcccggcgagccccgccc 194



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 312 gtgccggagaacttcgagcggttcaaggagtccgag 347
           ||||| |||||||| ||| |||||||||||||||||
Sbjct: 256 gtgccagagaacttagagaggttcaaggagtccgag 291
to top
>dbj|AB122115.1| Chlamydomonas reinhardtii LhcI-2 gene for light-harvesting
            chlorophyll-a/b protein of photosystem I (Type III),
            complete cds
          Length = 2389

 Score = 46.1 bits (23), Expect = 0.091
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 278  ggacttcgggttcgaccccctgggcct 304
            ||||||||| |||||||||||||||||
Sbjct: 1055 ggacttcggcttcgaccccctgggcct 1081
to top
>dbj|AB122118.1| Chlamydomonas reinhardtii LhcI-5 gene for light-harvesting
           chlorophyll-a/b protein of photosystem I, complete cds
          Length = 1886

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 279 gacttcgggttcgaccccctgggcct 304
           |||||||| |||||||||||||||||
Sbjct: 402 gacttcggcttcgaccccctgggcct 427
to top
>emb|AL117328.5|HSA494O16 Human DNA sequence from clone RP11-494O16 on chromosome 22, complete
             sequence
          Length = 50502

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 233   ccccggccagccccgccccgc 253
             |||||||||||||||||||||
Sbjct: 10640 ccccggccagccccgccccgc 10660
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 358   gccgctgggccatgctctgcgtgcc 382
             ||||||||||||||||| |||||||
Sbjct: 18354 gccgctgggccatgctcggcgtgcc 18330
to top
>ref|XM_631624.1| Dictyostelium discoideum AX4 hypothetical protein (DDB0187910),
            partial mRNA
          Length = 2787

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 18   tgttcttcttcctgttgttgt 38
            |||||||||||||||||||||
Sbjct: 2585 tgttcttcttcctgttgttgt 2565
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>gb|AC164112.2| Mus musculus BAC clone RP23-266E12 from chromosome 16, complete
             sequence
          Length = 171693

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 18    tgttcttcttcctgttgttgt 38
             |||||||||||||||||||||
Sbjct: 44932 tgttcttcttcctgttgttgt 44912
to top
>gb|AC154201.2| Mus musculus BAC clone RP24-83I8 from chromosome 16, complete sequence
          Length = 172923

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 18    tgttcttcttcctgttgttgt 38
             |||||||||||||||||||||
Sbjct: 12791 tgttcttcttcctgttgttgt 12811
to top
>gb|AF165214.1|AF165214 Bacteriophage D3, complete genome
          Length = 56425

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 189   tacgccaccacctccggccgc 209
             |||||||||||||||||||||
Sbjct: 33095 tacgccaccacctccggccgc 33115
to top
>emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll a/b binding protein
           LHCP
          Length = 967

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 353 ccactgccgctgggccatgct 373
           |||||||||||||||||||||
Sbjct: 364 ccactgccgctgggccatgct 384
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>ref|NG_001019.4| Homo sapiens immunoglobulin heavy locus (IGH@) on chromosome 14
          Length = 1279711

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 19     gttcttcttcctgttgttgtc 39
              |||||||||||||||||||||
Sbjct: 611006 gttcttcttcctgttgttgtc 610986
to top
>gb|AY495827.1| Oryctolagus cuniculus clone 179L1 kappa 1 light chain immunglobulin
             gene region
          Length = 205144

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 384   ggggtgctggtgccggaggcg 404
             |||||||||||||||||||||
Sbjct: 37249 ggggtgctggtgccggaggcg 37269
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>dbj|AB019440.1| Homo sapiens DNA for immunoglobulin heavy-chain variable region,
             complete sequence, 4 of 5
          Length = 200000

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 19    gttcttcttcctgttgttgtc 39
             |||||||||||||||||||||
Sbjct: 11006 gttcttcttcctgttgttgtc 10986
to top
>gb|AC149531.2| Xenopus tropicalis clone ISB-331C21, complete sequence
          Length = 98801

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 99    agcgggctcaggagctgcag 118
             ||||||||||||||||||||
Sbjct: 71384 agcgggctcaggagctgcag 71365
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>gb|AC101277.16| Mus musculus chromosome 1, clone RP23-101P2, complete sequence
          Length = 207021

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 232    tccccggccagccccgccccgccc 255
              |||||| |||||||||||||||||
Sbjct: 161740 tccccgcccagccccgccccgccc 161717
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>gb|AC160526.13| Mus musculus chromosome 8, clone RP24-191C23, complete sequence
          Length = 174746

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 239   ccagccccgccccgcccatc 258
             ||||||||||||||||||||
Sbjct: 25247 ccagccccgccccgcccatc 25266
to top
>ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1062

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 gacttcgggttcgaccccctgggcctcg 306
           |||||||| |||||||||||||| ||||
Sbjct: 258 gacttcggcttcgaccccctgggtctcg 285
to top
>ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1059

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 gacttcgggttcgaccccctgggcctcg 306
           |||||||| |||||||||||||| ||||
Sbjct: 259 gacttcggcttcgaccccctgggtctcg 286
to top
>ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1058

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 gacttcgggttcgaccccctgggcctcg 306
           |||||||| |||||||||||||| ||||
Sbjct: 261 gacttcggcttcgaccccctgggtctcg 288
to top
>ref|XM_478841.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1047

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 gacttcgggttcgaccccctgggcctcg 306
           |||||||| |||||||||||||| ||||
Sbjct: 264 gacttcggcttcgaccccctgggtctcg 291
to top
>ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1061

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 gacttcgggttcgaccccctgggcctcg 306
           |||||||| |||||||||||||| ||||
Sbjct: 264 gacttcggcttcgaccccctgggtctcg 291
to top
>ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1065

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 gacttcgggttcgaccccctgggcctcg 306
           |||||||| |||||||||||||| ||||
Sbjct: 265 gacttcggcttcgaccccctgggtctcg 292
to top
>ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1069

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 gacttcgggttcgaccccctgggcctcg 306
           |||||||| |||||||||||||| ||||
Sbjct: 265 gacttcggcttcgaccccctgggtctcg 292
to top
>ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
           mRNA
          Length = 1068

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 gacttcgggttcgaccccctgggcctcg 306
           |||||||| |||||||||||||| ||||
Sbjct: 268 gacttcggcttcgaccccctgggtctcg 295
to top
>gb|AF154570.2| Mus musculus fibroblast growth factor receptor 1 (Fgfr1) gene, exons
            6 to 9 and partial cds, alternatively spliced
          Length = 5993

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 239  ccagccccgccccgcccatc 258
            ||||||||||||||||||||
Sbjct: 5458 ccagccccgccccgcccatc 5439
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>gb|AC115341.6| Rattus norvegicus 3 BAC CH230-248O1 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 237425

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     cagcaaggagcagccagcat 67
              ||||||||||||||||||||
Sbjct: 144918 cagcaaggagcagccagcat 144899
to top
>gb|AY331258.1| Sphingomonas paucimobilis ORFA (orfA), ORFB (orfB), ORFC (orfC), ORFD
             (orfD), ORFE (orfE), ORFF (orfF), ORFG (orfG), ORFH
             (orfH), LinX1 (linX1), LinX2 (linX2), and LinA (linA)
             genes, complete cds; insertion sequence IS6100A, complete
             sequence; ORFJ' (orfJ') and ORFK (orfK) genes, complete
             cds; insertion sequence IS6100B, complete sequence; LinC
             (linC) gene, complete cds; insertion sequence IS6100C,
             complete sequence; and 'ORFN ('orfN), ORFO (orfO), ORFP
             (orfP), ORFQ (orfQ), ORFR (orfR), ORFS (orfS), ORFT
             (orfT), ORFU (orfU), ORFV (orfV), ORFW (orfW), ORFX
             (orfX), and ORFY (orfY) genes, complete cds
          Length = 41034

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 384   ggggtgctggtgccggaggcgctggggctggg 415
             |||||||||| || || |||||||||||||||
Sbjct: 38995 ggggtgctggcgctggtggcgctggggctggg 39026
to top
>gb|BC096514.1| Xenopus tropicalis c6.1a protein, mRNA (cDNA clone MGC:108101
           IMAGE:7004768), complete cds
          Length = 2375

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 99  agcgggctcaggagctgcag 118
           ||||||||||||||||||||
Sbjct: 736 agcgggctcaggagctgcag 755
to top
>gb|AC183614.3| Pan troglodytes BAC clone CH251-186N21 from chromosome 15, complete
             sequence
          Length = 136531

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    gttcttcttcctgttgttgt 38
             ||||||||||||||||||||
Sbjct: 82632 gttcttcttcctgttgttgt 82613
to top
>gb|AC142208.3| Homo sapiens chromosome 16 clone XXfos-89260C6, complete sequence
          Length = 37483

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 232   tccccggccagccccgccccgccc 255
             ||||| ||||||||||||||||||
Sbjct: 23797 tccccagccagccccgccccgccc 23774
to top
>ref|XM_823936.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.01.1410)
            partial mRNA
          Length = 1455

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 99   agcgggctcaggagctgcag 118
            ||||||||||||||||||||
Sbjct: 1235 agcgggctcaggagctgcag 1254
to top
>gb|AC037471.12| Homo sapiens chromosome 15, clone RP11-810K23, complete sequence
          Length = 217553

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     gttcttcttcctgttgttgt 38
              ||||||||||||||||||||
Sbjct: 159062 gttcttcttcctgttgttgt 159081
to top
>gb|AY163380.1| Zea mays putative ROP family GTPase ROP6 gene, complete cds
          Length = 2031

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 12   cacgcctgttcttcttcctg 31
            ||||||||||||||||||||
Sbjct: 1410 cacgcctgttcttcttcctg 1391
to top
>gb|AC127381.4| Homo sapiens BAC clone RP11-1360M22 from UL, complete sequence
          Length = 241627

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    gttcttcttcctgttgttgt 38
             ||||||||||||||||||||
Sbjct: 66713 gttcttcttcctgttgttgt 66694
to top
>gb|AC087386.7| Homo sapiens chromosome 15, clone RP11-173D3, complete sequence
          Length = 155343

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   gttcttcttcctgttgttgt 38
            ||||||||||||||||||||
Sbjct: 2442 gttcttcttcctgttgttgt 2461
to top
>emb|AJ245628.1|HSA245628 Homo sapiens EVN gene for pre-pro-enovin
          Length = 1188

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 232 tccccggccagccccgccccgccc 255
           |||| |||||||||||||||||||
Sbjct: 645 tcccgggccagccccgccccgccc 622
to top
>emb|AL357079.24| Human DNA sequence from clone RP11-7O11 on chromosome 1, complete
             sequence
          Length = 106769

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 232   tccccggccagccccgccccgccc 255
             |||| |||||||||||||||||||
Sbjct: 56334 tcccgggccagccccgccccgccc 56311
to top
>gb|AC069113.9| Homo sapiens chromosome 8, clone RP11-597M17, complete sequence
          Length = 197616

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     ttcttcttcctgttgttgtc 39
              ||||||||||||||||||||
Sbjct: 152853 ttcttcttcctgttgttgtc 152834
to top
>gb|AF276759.4| Homo sapiens chromosome 8 clone RP11-420F14 map p21-p11, complete
              sequence
          Length = 213611

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     ttcttcttcctgttgttgtc 39
              ||||||||||||||||||||
Sbjct: 102169 ttcttcttcctgttgttgtc 102150
to top
>ref|NM_001016457.2| Xenopus tropicalis c6.1a protein (c6.1a), mRNA
          Length = 2382

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 99  agcgggctcaggagctgcag 118
           ||||||||||||||||||||
Sbjct: 744 agcgggctcaggagctgcag 763
to top
>emb|AJ278665.1|ZMA278665 Zea mays mRNA for putative Rop family GTPase, ROP6 (rop6 gene)
          Length = 945

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 12  cacgcctgttcttcttcctg 31
           ||||||||||||||||||||
Sbjct: 622 cacgcctgttcttcttcctg 603
to top
>gb|AC021585.7| Homo sapiens chromosome , clone RP11-96F3, complete sequence
          Length = 187670

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    gttcttcttcctgttgttgt 38
             ||||||||||||||||||||
Sbjct: 63046 gttcttcttcctgttgttgt 63027
to top
>gb|AC149383.2| Phakopsora pachyrhizi clone JGIAFNA-5A9, complete sequence
          Length = 39440

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   cggccagccccgccccgccc 255
             ||||||||||||||||||||
Sbjct: 30471 cggccagccccgccccgccc 30490
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>gb|AC149146.3| Xenopus tropicalis clone ISB-156G23, complete sequence
          Length = 96721

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    agcgggctcaggagctgcag 118
             ||||||||||||||||||||
Sbjct: 42241 agcgggctcaggagctgcag 42260
to top
>gb|AY125979.1| Zea mays hexokinase mRNA, complete cds
          Length = 1893

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 115 gcagcgccgtgggcgtgccgagcctgct 142
           ||||||||||||||||| |||| |||||
Sbjct: 190 gcagcgccgtgggcgtggcgaggctgct 163
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>emb|Z17226.1|PSLHCA411 Pinus sylvestris Lhca4*1-1 gene encoding Lhca4 protein (type 4
           protein of light-harvesting complex of photosystem I)
          Length = 1013

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 284 cgggttcgaccccctgggcctcgc 307
           ||||||||| ||||||||||||||
Sbjct: 223 cgggttcgatcccctgggcctcgc 246
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>gb|AF279892.1| Rattus norvegicus 7-dehydrocholesterol reductase (Dhcr7) gene,
           complete cds
          Length = 17734

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 ggccagccccgccccgccca 256
           ||||||||||||||||||||
Sbjct: 898 ggccagccccgccccgccca 879
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 295     ccctgggcctcgccaccgtg 314
               ||||||||||||||||||||
Sbjct: 4683828 ccctgggcctcgccaccgtg 4683847
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>gb|AF349018.1|F349018S01 Homo sapiens topoisomerase I gene, exon 1; nuclear gene for
           mitochondrial product
          Length = 1963

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 236 cggccagccccgccccgccc 255
           ||||||||||||||||||||
Sbjct: 696 cggccagccccgccccgccc 677
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>gb|AC104835.3| Homo sapiens chromosome 3 clone RP11-27J5, complete sequence
          Length = 192570

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     ctgttcttcttcctgttgtt 36
              ||||||||||||||||||||
Sbjct: 146295 ctgttcttcttcctgttgtt 146314
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>gb|AC015917.30| Homo sapiens chromosome 17, clone CTD-2350C19, complete sequence
          Length = 123794

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 232  tccccggccagccccgccccgccc 255
            |||||| |||||||||||||||||
Sbjct: 4994 tccccgcccagccccgccccgccc 4971
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>gb|AC005038.5|AC005038 Homo sapiens BAC clone RP11-486I22 from 1, complete sequence
          Length = 190744

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 232    tccccggccagccccgccccgccc 255
              |||| |||||||||||||||||||
Sbjct: 154341 tcccgggccagccccgccccgccc 154364
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>gb|AC140838.3| Homo sapiens chromosome 16 clone XXfos-84069G6, complete sequence
          Length = 40546

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 232   tccccggccagccccgccccgccc 255
             ||||| ||||||||||||||||||
Sbjct: 33970 tccccagccagccccgccccgccc 33947
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 279      gacttcgggttcgaccccctgggcctcg 306
                |||||||| |||||||||||||| ||||
Sbjct: 23304570 gacttcggcttcgaccccctgggtctcg 23304597
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>gb|AC140540.3| Homo sapiens chromosome 16 clone XXfos-88730H2, complete sequence
          Length = 38342

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 232   tccccggccagccccgccccgccc 255
             ||||| ||||||||||||||||||
Sbjct: 32688 tccccagccagccccgccccgccc 32665
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>gb|AC105118.23| Homo sapiens chromosome 8, clone RP11-909N17, complete sequence
          Length = 179941

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 236  cggccagccccgccccgccc 255
            ||||||||||||||||||||
Sbjct: 4947 cggccagccccgccccgccc 4966



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 236  cggccagccccgccccgccc 255
            ||||||||||||||||||||
Sbjct: 4923 cggccagccccgccccgccc 4942



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 236  cggccagccccgccccgccc 255
            ||||||||||||||||||||
Sbjct: 4899 cggccagccccgccccgccc 4918
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>gb|AC087793.17| Homo sapiens chromosome 8, clone RP5-1118A7, complete sequence
          Length = 124060

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 236   cggccagccccgccccgccc 255
             ||||||||||||||||||||
Sbjct: 84248 cggccagccccgccccgccc 84267
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 153     tcccggtccggccgctccgg 172
               ||||||||||||||||||||
Sbjct: 4732354 tcccggtccggccgctccgg 4732335
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>gb|AC135263.5| Homo sapiens chromosome 15, clone RP13-381O4, complete sequence
          Length = 36235

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    gttcttcttcctgttgttgt 38
             ||||||||||||||||||||
Sbjct: 28936 gttcttcttcctgttgttgt 28917
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>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1065_B06
          Length = 113170

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 279   gacttcgggttcgaccccctgggcctcg 306
             |||||||| |||||||||||||| ||||
Sbjct: 59828 gacttcggcttcgaccccctgggtctcg 59855
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>gb|DQ163915.1| Bacteriophage PA11, complete genome
          Length = 49639

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 190  acgccaccacctccggccgc 209
            ||||||||||||||||||||
Sbjct: 6603 acgccaccacctccggccgc 6584
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 394     tgccggaggcgctggggctg 413
               ||||||||||||||||||||
Sbjct: 8029846 tgccggaggcgctggggctg 8029827
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>dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F08, full
           insert sequence
          Length = 1088

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 gacttcgggttcgaccccctgggcctcg 306
           |||||||| |||||||||||||| ||||
Sbjct: 279 gacttcggcttcgaccccctgggtctcg 306
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>emb|X64198.1|NTLHC1R N.tabacum LHC-I mRNA for photosystem I light-harvesting chlorophyll
           a/b-binding protein
          Length = 845

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 215 catgtccgccgagtggttccccggccagccccgccc 250
           |||||| ||||||||| | || ||||||||||||||
Sbjct: 164 catgtctgccgagtggatgccgggccagccccgccc 199
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>emb|Z16409.1|PSLHCA412 P.sylvestris Lhca4*1-2 mRNA encoding Lhca4 protein (type 4 protein
           of light-harvesting complex of photosystem I) (partial)
          Length = 968

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 284 cgggttcgaccccctgggcctcgc 307
           ||||||||| ||||||||||||||
Sbjct: 200 cgggttcgatcccctgggcctcgc 223
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>emb|X71965.1|CSCAB2MR C.stellata cab2 mRNA for light harvesting complex I chlorophyll
           binding protein
          Length = 1141

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 354 cactgccgctgggccatgct 373
           ||||||||||||||||||||
Sbjct: 268 cactgccgctgggccatgct 287
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>dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B06, full
           insert sequence
          Length = 1069

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 gacttcgggttcgaccccctgggcctcg 306
           |||||||| |||||||||||||| ||||
Sbjct: 265 gacttcggcttcgaccccctgggtctcg 292
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>dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C01, full
           insert sequence
          Length = 1065

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 gacttcgggttcgaccccctgggcctcg 306
           |||||||| |||||||||||||| ||||
Sbjct: 265 gacttcggcttcgaccccctgggtctcg 292
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>dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-H09, full
           insert sequence
          Length = 1080

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 gacttcgggttcgaccccctgggcctcg 306
           |||||||| |||||||||||||| ||||
Sbjct: 295 gacttcggcttcgaccccctgggtctcg 322
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>dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D02, full
           insert sequence
          Length = 1058

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 gacttcgggttcgaccccctgggcctcg 306
           |||||||| |||||||||||||| ||||
Sbjct: 261 gacttcggcttcgaccccctgggtctcg 288
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>dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E10, full
           insert sequence
          Length = 1061

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 gacttcgggttcgaccccctgggcctcg 306
           |||||||| |||||||||||||| ||||
Sbjct: 264 gacttcggcttcgaccccctgggtctcg 291
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>dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G05, full
           insert sequence
          Length = 1062

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 gacttcgggttcgaccccctgggcctcg 306
           |||||||| |||||||||||||| ||||
Sbjct: 258 gacttcggcttcgaccccctgggtctcg 285
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>dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H03, full
           insert sequence
          Length = 1059

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 gacttcgggttcgaccccctgggcctcg 306
           |||||||| |||||||||||||| ||||
Sbjct: 259 gacttcggcttcgaccccctgggtctcg 286
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>dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040A06, full
           insert sequence
          Length = 1646

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 gacttcgggttcgaccccctgggcctcg 306
           |||||||| |||||||||||||| ||||
Sbjct: 353 gacttcggcttcgaccccctgggtctcg 380
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>dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C01, full
           insert sequence
          Length = 1068

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 gacttcgggttcgaccccctgggcctcg 306
           |||||||| |||||||||||||| ||||
Sbjct: 268 gacttcggcttcgaccccctgggtctcg 295
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>gb|AY106111.1| Zea mays PCO074668 mRNA sequence
          Length = 1962

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 115 gcagcgccgtgggcgtgccgagcctgct 142
           ||||||||||||||||| |||| |||||
Sbjct: 293 gcagcgccgtgggcgtggcgaggctgct 266
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>emb|CR760965.2| Xenopus tropicalis finished cDNA, clone TEgg028n11
          Length = 2382

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 99  agcgggctcaggagctgcag 118
           ||||||||||||||||||||
Sbjct: 744 agcgggctcaggagctgcag 763
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>gb|AF115765.1|AF115765 Homo sapiens Artemin gene, alternative forms, complete cds
          Length = 1652

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 232 tccccggccagccccgccccgccc 255
           |||| |||||||||||||||||||
Sbjct: 915 tcccgggccagccccgccccgccc 892
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>gb|AC005726.1|AC005726 Homo sapiens chromosome 17, clone  hRPK.192_H_23, complete sequence
          Length = 185215

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 232    tccccggccagccccgccccgccc 255
              |||||| |||||||||||||||||
Sbjct: 149804 tccccgcccagccccgccccgccc 149781
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>gb|AF010321.1|AF010321 Oryza sativa photosystem I antenna protein (Lhca) mRNA, complete
           cds
          Length = 1066

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 279 gacttcgggttcgaccccctgggcctcg 306
           |||||||| |||||||||||||| ||||
Sbjct: 235 gacttcggcttcgaccccctgggtctcg 262
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>emb|Y11740.1|HSY11740 H.sapiens whn gene, exon 1a and 1b
          Length = 13380

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 232  tccccggccagccccgccccgccc 255
            |||||| |||||||||||||||||
Sbjct: 6999 tccccgcccagccccgccccgccc 7022


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,919,363
Number of Sequences: 3902068
Number of extensions: 2919363
Number of successful extensions: 64105
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63540
Number of HSP's gapped (non-prelim): 560
length of query: 420
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 398
effective length of database: 17,147,199,772
effective search space: 6824585509256
effective search space used: 6824585509256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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