Clone Information

BLAST Search Result

Clone Name	baet112g07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast...	189	3e-48
2	CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast...	173	2e-43
3	CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl...	170	2e-42
4	CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl...	169	3e-42
5	CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl...	169	4e-42
6	CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop...	169	4e-42
7	CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl...	168	6e-42
8	CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl...	168	6e-42
9	CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla...	168	6e-42
10	CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla...	167	8e-42
11	CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla...	166	2e-41
12	CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla...	166	2e-41
13	CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast...	166	2e-41
14	CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla...	166	2e-41
15	CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop...	166	3e-41
16	CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla...	165	4e-41
17	CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl...	165	5e-41
18	CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl...	163	1e-40
19	CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop...	163	2e-40
20	CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe...	162	3e-40
21	CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast...	161	6e-40
22	CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl...	160	1e-39
23	CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl...	160	1e-39
24	CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla...	160	1e-39
25	CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla...	159	3e-39
26	CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla...	159	4e-39
27	CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe...	158	5e-39
28	CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl...	158	5e-39
29	CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla...	158	6e-39
30	CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast...	157	8e-39
31	CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl...	157	8e-39
32	CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ...	156	2e-38
33	CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl...	156	2e-38
34	CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl...	155	3e-38
35	CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast...	155	4e-38
36	CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty...	150	1e-36
37	CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe...	148	6e-36
38	CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast...	145	4e-35
39	CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop...	143	2e-34
40	CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla...	142	3e-34
41	CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl...	142	3e-34
42	CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla...	142	3e-34
43	CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl...	142	3e-34
44	CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo...	140	1e-33
45	CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ...	139	3e-33
46	CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast...	138	5e-33
47	CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla...	136	3e-32
48	CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ...	132	3e-31
49	CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl...	132	4e-31
50	CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ...	130	1e-30
51	CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ...	128	7e-30
52	CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla...	125	6e-29
53	CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type...	120	2e-27
54	CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop...	117	9e-27
55	CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type...	114	1e-25
56	CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type...	111	9e-25
57	CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type...	89	5e-18
58	CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro...	79	6e-15
59	CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla...	75	9e-14
60	LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre...	70	3e-12
61	CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast...	69	6e-12
62	CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl...	64	1e-10
63	LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre...	62	6e-10
64	CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla...	55	1e-07
65	CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop...	54	2e-07
66	CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch...	53	3e-07
67	CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch...	52	8e-07
68	CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla...	51	1e-06
69	FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ...	38	0.009
70	CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo...	37	0.016
71	CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo...	35	0.061
72	CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo...	35	0.061
73	CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29	33	0.23
74	HIS7_SYNY3 (P48054) Imidazoleglycerol-phosphate dehydratase (EC ...	33	0.39
75	HIS7A_ARATH (P34047) Imidazoleglycerol-phosphate dehydratase 1 (...	32	0.67
76	HIS7B_ARATH (O23346) Probable imidazoleglycerol-phosphate dehydr...	32	0.67
77	PQQF_PSEPK (Q88QV3) Coenzyme PQQ synthesis protein F (EC 3.4.99....	32	0.87
78	MTDC_MOUSE (P18155) Bifunctional methylenetetrahydrofolate dehyd...	31	1.5
79	PTW3C_KLEPN (P45604) PTS system N-acetylglucosamine-specific EII...	31	1.5
80	HIS7_PEA (Q43072) Imidazoleglycerol-phosphate dehydratase (EC 4....	30	1.9
81	HIS7_SYNEL (Q8DMI3) Imidazoleglycerol-phosphate dehydratase (EC ...	30	2.5
82	NUP88_HUMAN (Q99567) Nuclear pore complex protein Nup88 (Nucleop...	30	2.5
83	NUP88_RAT (O08658) Nuclear pore complex protein Nup88 (Nucleopor...	30	2.5
84	MTDC_HUMAN (P13995) Bifunctional methylenetetrahydrofolate dehyd...	30	2.5
85	NUP88_MOUSE (Q8CEC0) Nuclear pore complex protein Nup88 (Nucleop...	30	2.5
86	HIS7_PROMA (Q7VDQ5) Imidazoleglycerol-phosphate dehydratase (EC ...	30	3.3
87	TAOK2_XENLA (Q6GPK9) Serine/threonine-protein kinase TAO2 (EC 2....	30	3.3
88	GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--...	30	3.3
89	HIS7_TRIS1 (Q93DQ9) Imidazoleglycerol-phosphate dehydratase (EC ...	29	4.3
90	PDK_ASCSU (O02623) [Pyruvate dehydrogenase [lipoamide]] kinase, ...	29	4.3
91	CNTRB_MOUSE (Q8CB62) Centrobin (LYST-interacting protein 8)	29	4.3
92	CYCG_RHOS4 (Q53143) Diheme cytochrome c-type	29	5.7
93	CH60_STRR6 (P0A336) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	29	5.7
94	CH60_STRPN (P0A335) 60 kDa chaperonin (Protein Cpn60) (groEL pro...	29	5.7
95	HIS7_ANASP (Q05068) Imidazoleglycerol-phosphate dehydratase (EC ...	29	5.7
96	ASB16_HUMAN (Q96NS5) Ankyrin repeat and SOCS box protein 16 (ASB...	29	5.7
97	HIS7_SYNPX (Q7U9M8) Imidazoleglycerol-phosphate dehydratase (EC ...	29	5.7
98	GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--...	28	7.4
99	GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	7.4
100	GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	7.4
101	GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	7.4
102	GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	7.4
103	RANB3_HUMAN (Q9H6Z4) Ran-binding protein 3 (RanBP3)	28	7.4
104	GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	7.4
105	MTDC_CHICK (Q5ZKA5) Bifunctional methylenetetrahydrofolate dehyd...	28	7.4
106	HIS7_GLOVI (Q7NMJ6) Imidazoleglycerol-phosphate dehydratase (EC ...	28	9.7
107	GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	9.7
108	YMT1_YEAST (Q04212) Hypothetical oxidoreductase YMR041C (EC 1.-....	28	9.7
109	XDHE_BACSU (O32143) Probable xanthine dehydrogenase subunit E (E...	28	9.7
110	GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	9.7

>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score =  189 bits (480), Expect = 3e-48
 Identities = 89/110 (80%), Positives = 92/110 (83%)
 Frame = +2

Query: 104 FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 283
           FAGK VK+LPSS+L G+                SSSPWYGSDRVLYLGPLSGEPPSYLTG
Sbjct: 13  FAGKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTG 72

Query: 284 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 73  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 122

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>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score =  173 bits (438), Expect = 2e-43
 Identities = 87/111 (78%), Positives = 89/111 (80%), Gaps = 1/111 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSSLFGEXXXXXXXXXXXXX-XXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK V ++PSSS FGE                 S SPWYG DRVLYLGPLSGEPPSYLT
Sbjct: 13  FAGKAV-NVPSSS-FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLT 70

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 121

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>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score =  170 bits (430), Expect = 2e-42
 Identities = 87/111 (78%), Positives = 89/111 (80%), Gaps = 1/111 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSS-SPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK V ++PSS LFGE                SS SPWYG DRVLYLGPLSGEPPSYLT
Sbjct: 13  FAGKAV-NVPSS-LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLT 70

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARN
Sbjct: 71  GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARN 121

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>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score =  169 bits (428), Expect = 3e-42
 Identities = 83/111 (74%), Positives = 84/111 (75%), Gaps = 1/111 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLT 72

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 123

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>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score =  169 bits (427), Expect = 4e-42
 Identities = 83/111 (74%), Positives = 84/111 (75%), Gaps = 1/111 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLT 72

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 123

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>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score =  169 bits (427), Expect = 4e-42
 Identities = 83/111 (74%), Positives = 84/111 (75%), Gaps = 1/111 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGKVVK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLT 72

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARN
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARN 123

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>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score =  168 bits (425), Expect = 6e-42
 Identities = 83/111 (74%), Positives = 84/111 (75%), Gaps = 1/111 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 12  FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLT 71

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 72  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 122

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>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score =  168 bits (425), Expect = 6e-42
 Identities = 83/111 (74%), Positives = 84/111 (75%), Gaps = 1/111 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLT 72

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 123

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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score =  168 bits (425), Expect = 6e-42
 Identities = 83/111 (74%), Positives = 85/111 (76%), Gaps = 1/111 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK VK  PSSS + G                 SSSPWYG +RV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLT 72

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 123



 Score = 29.3 bits (64), Expect(2) = 0.81
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +2

Query: 251 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403
           ++GEP   +         +D  GL+ DPE FA+ +  E+ + R AM    G
Sbjct: 178 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 228



 Score = 21.2 bits (43), Expect(2) = 0.81
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 91  LFPSLCRQGSEGLAIVVSFRGGSRHHAQDG 180
           +FP L  +        V F+GGS+  +Q G
Sbjct: 115 VFPELLARNGVKFGEAVWFKGGSQIFSQGG 144

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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score =  167 bits (424), Expect = 8e-42
 Identities = 83/111 (74%), Positives = 84/111 (75%), Gaps = 1/111 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 12  FAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLT 71

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 72  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 122



 Score = 29.3 bits (64), Expect = 4.3
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +2

Query: 251 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403
           ++GEP   +         +D  GL+ DPE FA+ +  E+ + R AM    G
Sbjct: 177 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 227

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>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score =  166 bits (421), Expect = 2e-41
 Identities = 83/111 (74%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK VK  P +S +FG                 S SPWYGSDRV YLGP SGEPPSYLT
Sbjct: 13  FAGKAVKLSPGASEVFG--TGRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLT 70

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 71  GEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARN 121

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>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score =  166 bits (421), Expect = 2e-41
 Identities = 81/101 (80%), Positives = 83/101 (82%), Gaps = 1/101 (0%)
 Frame = +2

Query: 134 SSSLFGEXXXXXXXXXXXXXXXXSS-SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWD 310
           SS+LFGE                SS SPWYG+DRVLYLGPLSGEPPSYLTGEFPGDYGWD
Sbjct: 21  SSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD 80

Query: 311 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           TAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARN
Sbjct: 81  TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARN 121

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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score =  166 bits (421), Expect = 2e-41
 Identities = 82/110 (74%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
 Frame = +2

Query: 107 AGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 283
           AGK VK  P++S + GE                SSSPWYG DRV YLGP SGE PSYLTG
Sbjct: 14  AGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTG 73

Query: 284 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 74  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 123

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>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score =  166 bits (420), Expect = 2e-41
 Identities = 82/111 (73%), Positives = 83/111 (74%), Gaps = 1/111 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAG  VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLT 72

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 73  GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 123

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>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score =  166 bits (419), Expect = 3e-41
 Identities = 82/111 (73%), Positives = 83/111 (74%), Gaps = 1/111 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLT 72

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           GEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 73  GEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 123

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>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score =  165 bits (418), Expect = 4e-41
 Identities = 77/100 (77%), Positives = 81/100 (81%)
 Frame = +2

Query: 134 SSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDT 313
           ++ +FGE                S SPWYG+DRVLYLGPLSGEPPSYLTGEFPGDYGWDT
Sbjct: 18  AAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 77

Query: 314 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           AGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARN
Sbjct: 78  AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARN 117

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>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score =  165 bits (417), Expect = 5e-41
 Identities = 79/110 (71%), Positives = 80/110 (72%)
 Frame = +2

Query: 104 FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 283
           FAGK V    SS + G                 S SPWYG DRV YLGP SGE PSYLTG
Sbjct: 13  FAGKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTG 72

Query: 284 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARN
Sbjct: 73  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARN 122

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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score =  163 bits (413), Expect = 1e-40
 Identities = 81/110 (73%), Positives = 83/110 (75%)
 Frame = +2

Query: 104 FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 283
           FAG+ VK  PS+S                    SSSPWYG DRV YLGP SGE PSYLTG
Sbjct: 13  FAGQAVKLSPSASEIS-GNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTG 71

Query: 284 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 72  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 121

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>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score =  163 bits (412), Expect = 2e-40
 Identities = 81/111 (72%), Positives = 82/111 (73%), Gaps = 1/111 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK VK   SSS + G                 SSSPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLT 72

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           GEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL ARN
Sbjct: 73  GEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARN 123

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>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score =  162 bits (410), Expect = 3e-40
 Identities = 73/77 (94%), Positives = 74/77 (96%)
 Frame = +2

Query: 203 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW 382
           S+SPWYG DRVLYLGP SGEPPSYLTGEFPGDYGWDTAGLSADPE FAKNRELEVIHCRW
Sbjct: 54  STSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRW 113

Query: 383 AMLGALGCVFPELLARN 433
           AMLGALGCVFPELLARN
Sbjct: 114 AMLGALGCVFPELLARN 130

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>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score =  161 bits (408), Expect = 6e-40
 Identities = 83/110 (75%), Positives = 83/110 (75%), Gaps = 1/110 (0%)
 Frame = +2

Query: 107 AGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 283
           AGK VK  PSSS LFG                 S SPWYG DRV YLGP SGE PSYLTG
Sbjct: 14  AGKAVKVAPSSSELFGNGRVSMRKTVKAPV---SDSPWYGPDRVKYLGPFSGEAPSYLTG 70

Query: 284 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARN
Sbjct: 71  EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARN 120

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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score =  160 bits (406), Expect = 1e-39
 Identities = 80/110 (72%), Positives = 82/110 (74%)
 Frame = +2

Query: 104 FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 283
           FAG+ VK  PS+                     SSSPWYG DRV YLGP SGE PSYLTG
Sbjct: 13  FAGQAVKLSPSAPEI-TGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTG 71

Query: 284 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN
Sbjct: 72  EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 121

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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score =  160 bits (405), Expect = 1e-39
 Identities = 77/109 (70%), Positives = 80/109 (73%)
 Frame = +2

Query: 107 AGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGE 286
           AGK +K  PSS   G                 S SPWYG DRV YLGP SGE PSYLTGE
Sbjct: 17  AGKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGE 76

Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           FPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RN
Sbjct: 77  FPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRN 125

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>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score =  160 bits (405), Expect = 1e-39
 Identities = 79/110 (71%), Positives = 82/110 (74%)
 Frame = +2

Query: 104 FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 283
           FAGK VK  P++S                    S SPWYGSDRV YLGP SGE PSYLTG
Sbjct: 13  FAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTG 72

Query: 284 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           EFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARN
Sbjct: 73  EFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARN 122

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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score =  159 bits (402), Expect = 3e-39
 Identities = 81/111 (72%), Positives = 84/111 (75%), Gaps = 1/111 (0%)
 Frame = +2

Query: 104 FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 280
           FAGK VK+L SSS + G+                  SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKNLSSSSEVQGDARVSMRKTAATKKV---GSPWYGPDRVKYLGPFSGESPSYLT 69

Query: 281 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARN
Sbjct: 70  GEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARN 120

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>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score =  159 bits (401), Expect = 4e-39
 Identities = 79/109 (72%), Positives = 81/109 (74%)
 Frame = +2

Query: 107 AGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGE 286
           AGK VK  PS+   G                 S SPWYG DRV YLGP SGEPPSYLTGE
Sbjct: 15  AGKAVKLGPSAPEVGRVSMRKTVTKQVS----SGSPWYGPDRVKYLGPFSGEPPSYLTGE 70

Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RN
Sbjct: 71  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 119

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>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score =  158 bits (400), Expect = 5e-39
 Identities = 72/75 (96%), Positives = 72/75 (96%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           SPWYG DRVLYLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAM
Sbjct: 60  SPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 119

Query: 389 LGALGCVFPELLARN 433
           LGALGCVFPELLARN
Sbjct: 120 LGALGCVFPELLARN 134

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>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score =  158 bits (400), Expect = 5e-39
 Identities = 78/110 (70%), Positives = 81/110 (73%)
 Frame = +2

Query: 104 FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 283
           FAGK V   P++S                    S SPWYGSDRV YLGP SGE PSYLTG
Sbjct: 13  FAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTG 72

Query: 284 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           EFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLARN
Sbjct: 73  EFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLARN 122

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>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score =  158 bits (399), Expect = 6e-39
 Identities = 74/96 (77%), Positives = 75/96 (78%)
 Frame = +2

Query: 146 FGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 325
           FGE                S SPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLS
Sbjct: 23  FGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 82

Query: 326 ADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           ADPETFAKNRELEVIH RWAMLGALGCVFPELL+RN
Sbjct: 83  ADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 118

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>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score =  157 bits (398), Expect = 8e-39
 Identities = 72/77 (93%), Positives = 72/77 (93%)
 Frame = +2

Query: 203 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW 382
           S SPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RW
Sbjct: 25  SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRW 84

Query: 383 AMLGALGCVFPELLARN 433
           AMLGALGCVFPELLARN
Sbjct: 85  AMLGALGCVFPELLARN 101

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>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score =  157 bits (398), Expect = 8e-39
 Identities = 71/75 (94%), Positives = 72/75 (96%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           SPWYG DRV+YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAM
Sbjct: 60  SPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 119

Query: 389 LGALGCVFPELLARN 433
           LGALGCVFPELLARN
Sbjct: 120 LGALGCVFPELLARN 134

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>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score =  156 bits (395), Expect = 2e-38
 Identities = 71/77 (92%), Positives = 72/77 (93%)
 Frame = +2

Query: 203 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW 382
           S SPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RW
Sbjct: 35  SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRW 94

Query: 383 AMLGALGCVFPELLARN 433
           AMLGALGCVFPELL+RN
Sbjct: 95  AMLGALGCVFPELLSRN 111

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>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score =  156 bits (394), Expect = 2e-38
 Identities = 75/110 (68%), Positives = 77/110 (70%)
 Frame = +2

Query: 104 FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 283
           FAGK V    SS +                   S SPWYG DRV YLGP SGE PSYLTG
Sbjct: 13  FAGKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTG 72

Query: 284 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           EFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL ARN
Sbjct: 73  EFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARN 122

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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score =  155 bits (393), Expect = 3e-38
 Identities = 72/97 (74%), Positives = 75/97 (77%)
 Frame = +2

Query: 143 LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGL 322
           +FGE                S SPWYG+DRVLYLGPLSG PPSYLTGEFPGDYGWDT GL
Sbjct: 24  VFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGL 83

Query: 323 SADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           SADPETFAKNRELEVIHCRWA+   LGCVFPELLARN
Sbjct: 84  SADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARN 120

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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score =  155 bits (392), Expect = 4e-38
 Identities = 73/101 (72%), Positives = 75/101 (74%)
 Frame = +2

Query: 131 PSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWD 310
           PSS   G                 S SPWYG DRV YLGP SGE PSYLTGEFPGDYGWD
Sbjct: 24  PSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 83

Query: 311 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           TAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL+RN
Sbjct: 84  TAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRN 124

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>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score =  150 bits (379), Expect = 1e-36
 Identities = 69/77 (89%), Positives = 71/77 (92%)
 Frame = +2

Query: 203 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW 382
           SSSPW+G D V YLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RW
Sbjct: 8   SSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRW 67

Query: 383 AMLGALGCVFPELLARN 433
           AMLGALGCVFPELL+RN
Sbjct: 68  AMLGALGCVFPELLSRN 84

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>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score =  148 bits (373), Expect = 6e-36
 Identities = 68/77 (88%), Positives = 70/77 (90%)
 Frame = +2

Query: 203 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW 382
           S S WYGSDR LYLGP SG PPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RW
Sbjct: 45  SGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRW 104

Query: 383 AMLGALGCVFPELLARN 433
           AMLGALGCV PELLA+N
Sbjct: 105 AMLGALGCVTPELLAKN 121

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>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score =  145 bits (366), Expect = 4e-35
 Identities = 66/75 (88%), Positives = 68/75 (90%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM
Sbjct: 46  SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 105

Query: 389 LGALGCVFPELLARN 433
           LGALGCVFPELLA+N
Sbjct: 106 LGALGCVFPELLAKN 120

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>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score =  143 bits (361), Expect = 2e-34
 Identities = 64/76 (84%), Positives = 69/76 (90%)
 Frame = +2

Query: 206 SSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 385
           +S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA
Sbjct: 46  TSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 105

Query: 386 MLGALGCVFPELLARN 433
           MLGALGCVFPE+L++N
Sbjct: 106 MLGALGCVFPEILSKN 121

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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score =  142 bits (359), Expect = 3e-34
 Identities = 63/75 (84%), Positives = 68/75 (90%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAM
Sbjct: 19  SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAM 78

Query: 389 LGALGCVFPELLARN 433
           LGALGCVFPE+L++N
Sbjct: 79  LGALGCVFPEILSKN 93

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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score =  142 bits (359), Expect = 3e-34
 Identities = 63/75 (84%), Positives = 68/75 (90%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAM
Sbjct: 47  SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAM 106

Query: 389 LGALGCVFPELLARN 433
           LGALGCVFPE+L++N
Sbjct: 107 LGALGCVFPEILSKN 121

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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score =  142 bits (359), Expect = 3e-34
 Identities = 63/75 (84%), Positives = 68/75 (90%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAM
Sbjct: 47  SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAM 106

Query: 389 LGALGCVFPELLARN 433
           LGALGCVFPE+L++N
Sbjct: 107 LGALGCVFPEILSKN 121

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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score =  142 bits (359), Expect = 3e-34
 Identities = 63/75 (84%), Positives = 68/75 (90%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAM
Sbjct: 47  SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAM 106

Query: 389 LGALGCVFPELLARN 433
           LGALGCVFPE+L++N
Sbjct: 107 LGALGCVFPEILSKN 121

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>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score =  140 bits (353), Expect = 1e-33
 Identities = 64/75 (85%), Positives = 66/75 (88%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           S WYG DR  YLGP S   PSYLTGEFPGDYGWDTA +SADPETFAKNRELEVIHCRWAM
Sbjct: 48  SIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVIHCRWAM 107

Query: 389 LGALGCVFPELLARN 433
           LGALGCVFPELLA+N
Sbjct: 108 LGALGCVFPELLAKN 122

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>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score =  139 bits (350), Expect = 3e-33
 Identities = 62/75 (82%), Positives = 68/75 (90%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           S WYG+DR  +LGP S + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAM
Sbjct: 46  SIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAM 105

Query: 389 LGALGCVFPELLARN 433
           LGALGC+FPELL++N
Sbjct: 106 LGALGCIFPELLSKN 120

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>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score =  138 bits (348), Expect = 5e-33
 Identities = 62/75 (82%), Positives = 67/75 (89%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAM
Sbjct: 45  SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAM 104

Query: 389 LGALGCVFPELLARN 433
           LGALGCVFPE+L++N
Sbjct: 105 LGALGCVFPEILSKN 119



 Score = 28.1 bits (61), Expect = 9.7
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G
Sbjct: 187 YPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFG 224

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>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score =  136 bits (342), Expect = 3e-32
 Identities = 62/75 (82%), Positives = 65/75 (86%)
 Frame = +2

Query: 209 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 388
           S WYG DR  YLGP S + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAM
Sbjct: 47  SIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAM 106

Query: 389 LGALGCVFPELLARN 433
           LGALGC FPELL +N
Sbjct: 107 LGALGCTFPELLEKN 121

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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score =  132 bits (333), Expect = 3e-31
 Identities = 64/107 (59%), Positives = 74/107 (69%)
 Frame = +2

Query: 113 KVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGEFP 292
           K V +L S  + G                 S + WYG+DR  +LGP SGE PSYL GEF 
Sbjct: 19  KPVNEL-SRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFA 77

Query: 293 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PELLA++
Sbjct: 78  GDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKS 124



 Score = 28.9 bits (63), Expect = 5.7
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = +2

Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G
Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFG 229

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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score =  132 bits (332), Expect = 4e-31
 Identities = 59/76 (77%), Positives = 64/76 (84%)
 Frame = +2

Query: 203 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW 382
           S+  WYG DRV YLGP S + PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RW
Sbjct: 43  SNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRW 102

Query: 383 AMLGALGCVFPELLAR 430
           AMLGALGC+FPE+L +
Sbjct: 103 AMLGALGCIFPEVLEK 118



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403
           +PG   +D  GL+ DP TFA+ +  E+ + R AM    G
Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFG 226

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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score =  130 bits (328), Expect = 1e-30
 Identities = 58/72 (80%), Positives = 62/72 (86%)
 Frame = +2

Query: 215 WYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 394
           WYG DRV YLGP S + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLG
Sbjct: 50  WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLG 109

Query: 395 ALGCVFPELLAR 430
           ALGCVFPE+L +
Sbjct: 110 ALGCVFPEVLQK 121



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +2

Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403
           +PG   +D  GL+ DP TFA+ +  E+ + R AM    G
Sbjct: 191 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFG 229

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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score =  128 bits (321), Expect = 7e-30
 Identities = 58/62 (93%), Positives = 59/62 (95%)
 Frame = +2

Query: 248 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 427
           P SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH  WAMLGALGCVFPELL+
Sbjct: 1   PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60

Query: 428 RN 433
           RN
Sbjct: 61  RN 62

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>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score =  125 bits (313), Expect = 6e-29
 Identities = 68/109 (62%), Positives = 71/109 (65%)
 Frame = +2

Query: 107 AGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGE 286
           AG+ +K  PS+   G                 S SPWYG DRV YLGP SGE PSYLTGE
Sbjct: 14  AGQAMKLAPSTPELG--VGRVSMRKTAPKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 71

Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 433
           F G        LSADPETFAKNRELEVIH RWAMLGALGCVFPELLARN
Sbjct: 72  FHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARN 112

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>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score =  120 bits (300), Expect = 2e-27
 Identities = 54/71 (76%), Positives = 59/71 (83%)
 Frame = +2

Query: 215 WYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 394
           WYG DR  +LGP S   P+YLTGEFPGDYGWDTAGLSADPETF K RELEVIH RWA+LG
Sbjct: 39  WYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLG 98

Query: 395 ALGCVFPELLA 427
           ALG + PELL+
Sbjct: 99  ALGILTPELLS 109



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +2

Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM    G
Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFG 217

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>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score =  117 bits (294), Expect = 9e-27
 Identities = 56/66 (84%), Positives = 58/66 (87%)
 Frame = +2

Query: 230 RVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCV 409
           RV YLGP SGE PSYLTGEFPGDYGWDTAGLSA PETFAKNRELEVIH R AM  ALGC+
Sbjct: 58  RVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCI 117

Query: 410 FPELLA 427
           FPELL+
Sbjct: 118 FPELLS 123

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>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  114 bits (284), Expect = 1e-25
 Identities = 54/78 (69%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
 Frame = +2

Query: 203 SSSPWYGSDRVLYLGPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 379
           S   +YG +R  +LGP S    P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH R
Sbjct: 32  SGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHAR 91

Query: 380 WAMLGALGCVFPELLARN 433
           WAMLGALGC  PELLA++
Sbjct: 92  WAMLGALGCQTPELLAKS 109

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>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  111 bits (277), Expect = 9e-25
 Identities = 50/73 (68%), Positives = 61/73 (83%), Gaps = 1/73 (1%)
 Frame = +2

Query: 215 WYGSDRVLYLGPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 391
           +YG DR  +LGP S  + P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+L
Sbjct: 33  FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92

Query: 392 GALGCVFPELLAR 430
           GALG + PELL++
Sbjct: 93  GALGILTPELLSQ 105



 Score = 30.0 bits (66), Expect = 2.5
 Identities = 16/39 (41%), Positives = 24/39 (61%)
 Frame = +2

Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM   LG
Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLG 214

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>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 89.0 bits (219), Expect = 5e-18
 Identities = 46/75 (61%), Positives = 53/75 (70%)
 Frame = +2

Query: 203 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRW 382
           S++ +YG D       L  + P   TGEFPGDYGWDTAGLSADPETF + RELE+IH R 
Sbjct: 53  SANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARC 111

Query: 383 AMLGALGCVFPELLA 427
            +LGALG V PELLA
Sbjct: 112 GLLGALGMVTPELLA 126



 Score = 32.0 bits (71), Expect = 0.67
 Identities = 16/39 (41%), Positives = 25/39 (64%)
 Frame = +2

Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM   LG
Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLG 235

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>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 78.6 bits (192), Expect = 6e-15
 Identities = 40/73 (54%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
 Frame = +2

Query: 215 WYGSDRVLYL--GPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 385
           WYG DR ++L  G L   E P YL GE  GDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 62  WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWA 121

Query: 386 MLGALGCVFPELL 424
           MLGA G + PE L
Sbjct: 122 MLGAAGFIIPEAL 134

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>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 74.7 bits (182), Expect = 9e-14
 Identities = 30/56 (53%), Positives = 41/56 (73%)
 Frame = +2

Query: 263 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 430
           PP +L G  PGD+G+D  GL++DPE+   N++ E++HCRWAMLGA G   PELL +
Sbjct: 74  PPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTK 129

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>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 69.7 bits (169), Expect = 3e-12
 Identities = 32/54 (59%), Positives = 39/54 (72%)
 Frame = +2

Query: 263 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 424
           PP YLTGE  GD G+D AGL+ADP TF + +  EV HCR +ML  +GC+ PELL
Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL 433



 Score = 68.2 bits (165), Expect = 8e-12
 Identities = 30/59 (50%), Positives = 41/59 (69%)
 Frame = +2

Query: 254 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 430
           + EPP+ LTGE+P D G+D   L+ADP+ +A+ R  EV H R AML  +GC+ PELL +
Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGK 251



 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 28/55 (50%), Positives = 38/55 (69%)
 Frame = +2

Query: 266 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 430
           PS+L GE+ GD G+D AGL+ADP+TF + R  EV H R AML  +G + P+ L +
Sbjct: 12  PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYLGK 66

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>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 68.6 bits (166), Expect = 6e-12
 Identities = 28/56 (50%), Positives = 37/56 (66%)
 Frame = +2

Query: 263 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 430
           PP +L G  PGD+G+D  GL +DPE+   N + E++H RWAMLGA G   PE L +
Sbjct: 74  PPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPEFLTK 129

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>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 64.3 bits (155), Expect = 1e-10
 Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = +2

Query: 251 LSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 424
           + G+P PSYL G  PGD+G+D+ GL   P    + +E E+IHCRWAML   G + PE L
Sbjct: 50  MPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL 108

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>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 62.0 bits (149), Expect = 6e-10
 Identities = 26/57 (45%), Positives = 39/57 (68%)
 Frame = +2

Query: 260 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 430
           +PP++LTGE+P D G+D   ++ADP  +A+ R  EV H R +ML  +G + PELL +
Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELLGK 223



 Score = 33.5 bits (75), Expect = 0.23
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +2

Query: 332 PETFAKNRELEVIHCRWAMLGALGCVFPELL 424
           P  + + R  EV + R AML  +GCV+PELL
Sbjct: 1   PTVYERMRVAEVFNGRLAMLAIVGCVYPELL 31

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>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 24/55 (43%), Positives = 33/55 (60%)
 Frame = +2

Query: 266 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 430
           P YLTG   GD G+D  GL+ DPE      + E+++ RWAMLG  G + PE+  +
Sbjct: 64  PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTK 118

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>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +2

Query: 266 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403
           P +L G  PGD+G+D  GL  DP      RE E+IH RWAML  LG
Sbjct: 73  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLG 118

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>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 24/46 (52%), Positives = 27/46 (58%)
 Frame = +2

Query: 266 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403
           P +L G  PGDYG+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 68  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113

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>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 51.6 bits (122), Expect = 8e-07
 Identities = 23/46 (50%), Positives = 27/46 (58%)
 Frame = +2

Query: 266 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403
           P +L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 68  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113

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>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
 Frame = +2

Query: 221 GSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE---TFAKNREL---EVIHCRW 382
           G++R L+    S +  SYL G  PGD+G+D  GLS DPE    F + + L   EVI+ R+
Sbjct: 50  GANRQLWFA--SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRF 106

Query: 383 AMLGALGCVFPELLAR 430
           AMLGA G + PE+L +
Sbjct: 107 AMLGAAGAIAPEILGK 122

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>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 208

 Score = 38.1 bits (87), Expect = 0.009
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
 Frame = +2

Query: 242 LGPLSGEPPSYLT-GEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGALGCVFP 415
           + P +G+  S L  G  PGD G+D  GL+ +DP+ F   +E E+ H R AM+ A G +  
Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQ 191

Query: 416 ELLA 427
           E ++
Sbjct: 192 EAVS 195

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>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 33/110 (30%), Positives = 38/110 (34%), Gaps = 43/110 (39%)
 Frame = +2

Query: 224 SDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------ 352
           SDR L+      + P YL G   GDYG+D  GL    E             AKN      
Sbjct: 50  SDRPLWFP--GAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVI 107

Query: 353 --------------------------RELEVIHCRWAMLGALGCVFPELL 424
                                     RE E+IH RWAML  LG +  E L
Sbjct: 108 GTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWL 157



 Score = 33.5 bits (75), Expect = 0.23
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +2

Query: 233 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403
           VL +G +  +  + L  E   +PG   +D  GL++DP   A+ +  E+ H R AM+G LG
Sbjct: 193 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252

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>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 35.4 bits (80), Expect = 0.061
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +2

Query: 233 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403
           VL +G +  +  + L  E   +PG   +D  GL+ADPE  A+ +  E+ H R AM+  LG
Sbjct: 196 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 34/111 (30%), Positives = 40/111 (36%), Gaps = 44/111 (39%)
 Frame = +2

Query: 224 SDRVL-YLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN----- 352
           +DR L Y G +S   P +L G   GDYG+D  GL    E             AKN     
Sbjct: 53  TDRPLWYPGAIS---PDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDV 109

Query: 353 ---------------------------RELEVIHCRWAMLGALGCVFPELL 424
                                      RE E+IH RWAML  LG +  E L
Sbjct: 110 IGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWL 160

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>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 35.4 bits (80), Expect = 0.061
 Identities = 29/97 (29%), Positives = 33/97 (34%), Gaps = 43/97 (44%)
 Frame = +2

Query: 263 PPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------------------- 352
           PP +L G   GD G+D  GL    E             AKN                   
Sbjct: 65  PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124

Query: 353 -------------RELEVIHCRWAMLGALGCVFPELL 424
                        RE E+IH RWAMLG LG +  E L
Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEAL 161



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
 Frame = +2

Query: 233 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 400
           VL +G +  +  S L  E   +PG Y +D  GL+ADPE     +  E+ H R AM+  L
Sbjct: 197 VLVVGYIEFQRNSELDPEKRIYPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254

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>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 33.5 bits (75), Expect = 0.23
 Identities = 28/96 (29%), Positives = 32/96 (33%), Gaps = 45/96 (46%)
 Frame = +2

Query: 266 PSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 352
           P +L G  PGD G+D  GLS   E             AKN                    
Sbjct: 59  PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSEN 118

Query: 353 --------------RELEVIHCRWAMLGALGCVFPE 418
                         RE E+IH RWAML  LG +  E
Sbjct: 119 RLAPYSEVFGLARFRECELIHGRWAMLACLGALVAE 154

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>HIS7_SYNY3 (P48054) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 210

 Score = 32.7 bits (73), Expect = 0.39
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1

Query: 216 HGLLEATFLAFAAVLRMVTRASPKRDDDGKSFTTLPAKAG 97
           H ++EATF AFA  +RM     P+R D      T+P+  G
Sbjct: 175 HHIIEATFKAFARAMRMAIEVDPRRAD------TIPSSKG 208

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>HIS7A_ARATH (P34047) Imidazoleglycerol-phosphate dehydratase 1 (EC 4.2.1.19)|
           (IGPD 1)
          Length = 270

 Score = 32.0 bits (71), Expect = 0.67
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = -1

Query: 225 EPYHGLLEATFLAFAAVLRMVTRASPKRDDDGKSFTTLPAKAG 97
           E  H ++EATF AFA  LR  T   P+R        T+P+  G
Sbjct: 229 ENSHHIIEATFKAFARALRQATETDPRRGG------TIPSSKG 265

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>HIS7B_ARATH (O23346) Probable imidazoleglycerol-phosphate dehydratase 2 (EC|
           4.2.1.19) (IGPD 2)
          Length = 259

 Score = 32.0 bits (71), Expect = 0.67
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1

Query: 216 HGLLEATFLAFAAVLRMVTRASPKRDDDGKSFTTLPAKAG 97
           H ++EATF AFA  LR  T + P+R        T+P+  G
Sbjct: 221 HHIIEATFKAFARALRQATESDPRRGG------TIPSSKG 254

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>PQQF_PSEPK (Q88QV3) Coenzyme PQQ synthesis protein F (EC 3.4.99.-)|
           (Pyrroloquinoline quinone biosynthesis protein F)
          Length = 766

 Score = 31.6 bits (70), Expect = 0.87
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 217 PRAAGGNLLGLCRRLAHGDASLPEKRRRWQVLH 119
           P A GG L  LC+ LA  D  +  +RR  +V+H
Sbjct: 96  PNALGGGLERLCQMLAEPDLGIERQRREREVIH 128

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>MTDC_MOUSE (P18155) Bifunctional methylenetetrahydrofolate|
           dehydrogenase/cyclohydrolase, mitochondrial precursor
           [Includes: NAD-dependent methylenetetrahydrofolate
           dehydrogenase (EC 1.5.1.15); Methenyltetrahydrofolate
           cyclohydrolase (EC 3.5.4.9)]
          Length = 350

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 20/76 (26%), Positives = 37/76 (48%)
 Frame = -3

Query: 430 AGEQLGEDTTERAKHGPTAMDHLELPVLGEGLWVSRQSSGVPPVVTGELTGQVARGLTRK 251
           A E+ G D T    H  T  + L+   +   + +S  ++G+P ++T ++  + A  +   
Sbjct: 218 AHERPGGDATVTISHRYTPKEQLKKHTILADIVIS--AAGIPNLITADMIKEGAAVIDVG 275

Query: 250 WAEVEDPVRAVPRAAG 203
              V+DPV A P+  G
Sbjct: 276 INRVQDPVTAKPKLVG 291

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>PTW3C_KLEPN (P45604) PTS system N-acetylglucosamine-specific EIICBA component|
           (EIICBA-Nag) (EII-Nag) [Includes: N-acetylglucosamine
           permease IIC component (PTS system
           N-acetylglucosamine-specific EIIC component);
           N-acetylglucosamine-specific phosphotrans
          Length = 651

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 6/71 (8%)
 Frame = -1

Query: 195 FLAFAAVLRMVTRASPKRDDDGKSFTTLPAKAGEERDMV------VAAIVVDGGLVYAVF 34
           FL F+AV+RM    +P R+D      T  A +  E  +       +AA+     L     
Sbjct: 352 FLLFSAVIRMFNLKTPGREDKAADVVTEEANSNTEEGLTQLATSYIAAVGGTDNLKAIDA 411

Query: 33  CSPRMRSRCGD 1
           C  R+R   GD
Sbjct: 412 CITRLRLTVGD 422

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>HIS7_PEA (Q43072) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 281

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 216 HGLLEATFLAFAAVLRMVTRASPKR 142
           H ++EATF AFA  LR  T   P+R
Sbjct: 243 HHIIEATFKAFARALRQATEYDPRR 267

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>HIS7_SYNEL (Q8DMI3) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 210

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 216 HGLLEATFLAFAAVLRMVTRASPKR 142
           H ++EATF AFA  LRM     P+R
Sbjct: 173 HHIIEATFKAFARALRMAIALDPRR 197

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>NUP88_HUMAN (Q99567) Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88|
           kDa nuclear pore complex protein)
          Length = 741

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 143 ETTMASPSLPCRQRLGKRGTWSLPPLLSMEVLCM 42
           E  + +  LPCRQ    RG W +P +L   ++C+
Sbjct: 450 EHILCTKPLPCRQPAPIRGFWIVPDILGPTMICI 483

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>NUP88_RAT (O08658) Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88|
           kDa nuclear pore complex protein) (Nucleoporin Nup84)
          Length = 742

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 143 ETTMASPSLPCRQRLGKRGTWSLPPLLSMEVLCM 42
           E  + +  LPCRQ    RG W +P +L   ++C+
Sbjct: 451 EHILCTKPLPCRQPAPIRGFWIVPDILGPTMICI 484

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>MTDC_HUMAN (P13995) Bifunctional methylenetetrahydrofolate|
           dehydrogenase/cyclohydrolase, mitochondrial precursor
           [Includes: NAD-dependent methylenetetrahydrofolate
           dehydrogenase (EC 1.5.1.15); Methenyltetrahydrofolate
           cyclohydrolase (EC 3.5.4.9)]
          Length = 344

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 20/76 (26%), Positives = 36/76 (47%)
 Frame = -3

Query: 430 AGEQLGEDTTERAKHGPTAMDHLELPVLGEGLWVSRQSSGVPPVVTGELTGQVARGLTRK 251
           A E+ G D T    H  T  + L+   +   + +S  ++G+P ++T ++  + A  +   
Sbjct: 212 AHERPGGDATVTISHRYTPKEQLKKHTILADIVIS--AAGIPNLITADMIKEGAAVIDVG 269

Query: 250 WAEVEDPVRAVPRAAG 203
              V DPV A P+  G
Sbjct: 270 INRVHDPVTAKPKLVG 285

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>NUP88_MOUSE (Q8CEC0) Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88|
           kDa nuclear pore complex protein)
          Length = 753

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 143 ETTMASPSLPCRQRLGKRGTWSLPPLLSMEVLCM 42
           E  + +  LPCRQ    RG W +P +L   ++C+
Sbjct: 451 EHILCTKPLPCRQPAPIRGFWIVPDILGPTMICI 484

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>HIS7_PROMA (Q7VDQ5) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 210

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -1

Query: 216 HGLLEATFLAFAAVLRMVTRASPKRDDDGKSFTTLPAKAGE 94
           H ++EA F AFA  LRM   A P+R     S   +  +AG+
Sbjct: 163 HHIVEACFKAFAKSLRMAIEADPRRGGSIPSSKGVLEQAGD 203

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>TAOK2_XENLA (Q6GPK9) Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand|
            and one amino acid protein 2)
          Length = 1025

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -2

Query: 206  WRQPSWPLPPSCAW*REPPRKETTMAS 126
            WRQP+   PPS +W   PP   +++++
Sbjct: 935  WRQPTLLAPPSASWGLHPPGSSSSLSA 961

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>GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 18/59 (30%), Positives = 26/59 (44%)
 Frame = +2

Query: 203 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 379
           S  PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H R
Sbjct: 125 SQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180

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>HIS7_TRIS1 (Q93DQ9) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 213

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -1

Query: 216 HGLLEATFLAFAAVLRMVTRASPKR 142
           H ++EA F AFA  LRM T   P+R
Sbjct: 178 HHIIEAGFKAFARSLRMATEIDPRR 202

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>PDK_ASCSU (O02623) [Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial|
           precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase)
          Length = 399

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
 Frame = +1

Query: 19  HSWRTKYSIHKTS----IDNNGGNDHVPLFPSLCRQGSEGLAIVVSFRGG 156
           H +   + + K S    ++N+G ++ +P    +  +G+E L+I +S RGG
Sbjct: 240 HLYHIMFELFKNSMRATVENHGADEDLPPIKVMVVRGAEDLSIKISDRGG 289

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>CNTRB_MOUSE (Q8CB62) Centrobin (LYST-interacting protein 8)|
          Length = 887

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -2

Query: 155 PPRKETTMASPSLP--CRQRLGKRGTWSLPPL 66
           PP  +  +A PS P       G+R TW++PP+
Sbjct: 569 PPNPQAPLAEPSSPGPLEPEKGERRTWAMPPM 600

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>CYCG_RHOS4 (Q53143) Diheme cytochrome c-type|
          Length = 296

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -3

Query: 340 GLWVSRQSSGVPPVVTGELTGQVARGLTRKWAEVEDPVRAVPRAAG 203
           GLW++R     P +  G LTG+ +RG    WA       A P A+G
Sbjct: 19  GLWLTRPVKSDPELFAG-LTGEASRGERIFWAGGCASCHAAPDASG 63

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>CH60_STRR6 (P0A336) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 540

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 310 VPPVVTGELTGQVARGLTRKWAEVEDPVRAVPRAAG 203
           +P V T ELTG  A G       +E+PVR +   AG
Sbjct: 421 IPAVATLELTGDEATGRNIVLRALEEPVRQIAHNAG 456

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>CH60_STRPN (P0A335) 60 kDa chaperonin (Protein Cpn60) (groEL protein)|
          Length = 540

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -3

Query: 310 VPPVVTGELTGQVARGLTRKWAEVEDPVRAVPRAAG 203
           +P V T ELTG  A G       +E+PVR +   AG
Sbjct: 421 IPAVATLELTGDEATGRNIVLRALEEPVRQIAHNAG 456

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>HIS7_ANASP (Q05068) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 209

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -1

Query: 216 HGLLEATFLAFAAVLRMVTRASPKR 142
           H ++EATF AFA   RM     P+R
Sbjct: 174 HHIIEATFKAFARAARMAIEVDPRR 198

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>ASB16_HUMAN (Q96NS5) Ankyrin repeat and SOCS box protein 16 (ASB-16)|
          Length = 453

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
 Frame = +3

Query: 63  QQWRQRPCPSLPQPLPAR**RTC-----HRRLFSGRL 158
           QQ R R CPS P+    R  R+C     H  LFSG L
Sbjct: 34  QQCRSRRCPSSPRARLTRPHRSCRDPAVHHALFSGNL 70

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>HIS7_SYNPX (Q7U9M8) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 202

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 216 HGLLEATFLAFAAVLRMVTRASPKR 142
           H ++EA F AF+  LRM T   P+R
Sbjct: 161 HHIVEACFKAFSRALRMATEIDPRR 185

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>GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +2

Query: 212 PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 379
           PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180

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>GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +2

Query: 212 PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 379
           PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180

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>GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +2

Query: 212 PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 379
           PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLLGTDGHPFGWPSDGFPGPQGLYYCGVGADK---AYRRDIMEAHYR 180

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>GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +2

Query: 212 PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 379
           PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180

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>GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +2

Query: 212 PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 379
           PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180

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>RANB3_HUMAN (Q9H6Z4) Ran-binding protein 3 (RanBP3)|
          Length = 567

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -2

Query: 242 GRGPGQSRTTGCWRQPSWPLPPSCAW-*REPPRKETTMASPSLPCRQR 102
           G  P  S  T  WR PS      CA   +EP + E++ AS    C ++
Sbjct: 205 GAVPAASPDTAAWRSPSEAADEVCALEEKEPQKNESSNASEEEACEKK 252

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>GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase)
          Length = 392

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +2

Query: 212 PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 331
           PW+G ++   L  ++G P  +    FPG  G    G+ AD
Sbjct: 129 PWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGAD 168

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>MTDC_CHICK (Q5ZKA5) Bifunctional methylenetetrahydrofolate|
           dehydrogenase/cyclohydrolase, mitochondrial precursor
           [Includes: NAD-dependent methylenetetrahydrofolate
           dehydrogenase (EC 1.5.1.15); Methenyltetrahydrofolate
           cyclohydrolase (EC 3.5.4.9)]
          Length = 337

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 18/74 (24%), Positives = 35/74 (47%)
 Frame = -3

Query: 424 EQLGEDTTERAKHGPTAMDHLELPVLGEGLWVSRQSSGVPPVVTGELTGQVARGLTRKWA 245
           E+ G D T    H  T  + L+   +   + V+  ++G+P ++T ++  + A  +     
Sbjct: 215 ERPGGDATVTISHRYTPKEQLKQHTIRADIVVA--AAGIPNLITADMIKEGAAVIDVGIT 272

Query: 244 EVEDPVRAVPRAAG 203
            V+DP+ A  R  G
Sbjct: 273 RVQDPITAKSRLVG 286

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>HIS7_GLOVI (Q7NMJ6) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 197

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 216 HGLLEATFLAFAAVLRMVTRASPKR 142
           H ++EA+F AFA  LR+     P+R
Sbjct: 162 HHIIEASFKAFARALRLAVEIDPRR 186

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>GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +2

Query: 212 PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 379
           PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADR---AYGRDIVEAHYR 180

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>YMT1_YEAST (Q04212) Hypothetical oxidoreductase YMR041C (EC 1.-.-.-)|
          Length = 335

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 14/87 (16%)
 Frame = +2

Query: 206 SSPWYGSDRVLYLGPLSGEPPSYLTGEFP----------GDYGWDTAGLSADPETFAKNR 355
           +SP+YG   VLY     G   S L  EFP          G  G +    S D   F+ +R
Sbjct: 54  TSPYYGPSEVLY-----GRALSNLRNEFPRDTYFICTKVGRIGAEEFNYSRDFVRFSVHR 108

Query: 356 ELEVIHCRWAMLGALGCV----FPELL 424
             E +H  +  L  L  V    FP++L
Sbjct: 109 SCERLHTTYLDLVYLHDVEFVKFPDIL 135

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>XDHE_BACSU (O32143) Probable xanthine dehydrogenase subunit E (EC 1.17.1.4)|
           (XDHase subunit E)
          Length = 173

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 135 DGKSFTTLPAKAGEERDMVVAAIVVDGGLVYAVFCSPRM 19
           DG S TT+     EE DM   A + +GG     +C+P M
Sbjct: 80  DGHSITTIEGLQKEELDMCQTAFLEEGGF-QCGYCTPGM 117

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>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 373

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 17/56 (30%), Positives = 25/56 (44%)
 Frame = +2

Query: 212 PWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 379
           PW+G ++   L    G P  + +  FPG  G    G+ AD    A  R++   H R
Sbjct: 129 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADR---AYGRDIVEAHYR 181


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,011,412
Number of Sequences: 219361
Number of extensions: 1462340
Number of successful extensions: 5387
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 5087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5366
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result