ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet112c07 |
|---|---|
| Clone Library Name | barley_pub |
>CARP_IRPLA (P17576) Polyporopepsin (EC 3.4.23.29) (Aspartic proteinase)| Length = 340 Score = 37.7 bits (86), Expect = 0.018 Identities = 15/29 (51%), Positives = 21/29 (72%) Frame = +2 Query: 416 LEYVITVGVGSPAVQQIMTIDTGSDVSWL 502 ++YV+ VGVGSPA + +DTGS +WL Sbjct: 12 VDYVVNVGVGSPATTYSLLVDTGSSNTWL 40
>ABDB_DROME (P09087) Homeobox protein abdominal-B (P3) (Infraabdominal 7)| (IAB-7) (PH189) Length = 493 Score = 33.1 bits (74), Expect = 0.44 Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 6/69 (8%) Frame = +2 Query: 110 SAAGEQSYKILSTSSLKPQAVCSEP--KGIPS---SSSGATVPLN-HRHGPCSPAPTKKE 271 SAA QS + STSS +P S +G PS SSSGA+ L+ GPC+P P E Sbjct: 321 SAAARQSVEGTSTSSYEPPTYSSPGGLRGYPSENYSSSGASGGLSVGAVGPCTPNPGLHE 380 Query: 272 PTFEERLRR 298 T + +R+ Sbjct: 381 WTGQVSVRK 389
>HXD3_MOUSE (P09027) Homeobox protein Hox-D3 (Hox-4.1) (MH-19)| Length = 417 Score = 33.1 bits (74), Expect = 0.44 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 5/28 (17%) Frame = +2 Query: 194 PSSSS-----GATVPLNHRHGPCSPAPT 262 PSS+S A +P NH HGPC P PT Sbjct: 367 PSSASVDYSCAAQIPGNHHHGPCDPHPT 394
>PEPA_BOVIN (P00792) Pepsin A precursor (EC 3.4.23.1)| Length = 372 Score = 33.1 bits (74), Expect = 0.44 Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 4/83 (4%) Frame = +2 Query: 266 KEPTFEERLRRDTLRAGYVQRKFSRNHR---GGGVLQSEAVKVPTE-LGSPQDTLEYVIT 433 K P +++ R L ++F R H+ G ++ A V + L + DT EY T Sbjct: 5 KIPLVKKKSLRQNLIENGKLKEFMRTHKYNLGSKYIREAATLVSEQPLQNYLDT-EYFGT 63 Query: 434 VGVGSPAVQQIMTIDTGSDVSWL 502 +G+G+PA + DTGS W+ Sbjct: 64 IGIGTPAQDFTVIFDTGSSNLWV 86
>HXD3_HUMAN (P31249) Homeobox protein Hox-D3 (Hox-4A)| Length = 416 Score = 33.1 bits (74), Expect = 0.44 Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 5/28 (17%) Frame = +2 Query: 194 PSSSS-----GATVPLNHRHGPCSPAPT 262 PSS+S A +P NH HGPC P PT Sbjct: 366 PSSASVDYSCAAQIPGNHHHGPCDPHPT 393
>BOSS_DROVI (Q24738) Protein bride of sevenless precursor| Length = 893 Score = 32.3 bits (72), Expect = 0.75 Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%) Frame = +2 Query: 68 LLLLSCI-ICHALIASAAGEQSYKILSTSSLKPQAVCSEPKGIPSSSSGAT 217 L+ +SCI +CHA+ A+ ++S + T KPQ V S IP+++ G+T Sbjct: 20 LITISCIDLCHAVGAATPTKKSPPVRIT---KPQPVSSTTTAIPTTNEGST 67
>NEP2_NEPGR (Q766C2) Aspartic proteinase nepenthesin-2 precursor (EC 3.4.23.-)| (Nepenthesin-II) Length = 438 Score = 32.0 bits (71), Expect = 0.98 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 5/107 (4%) Frame = +2 Query: 194 PSSSSGATVPLNHRHGPCSPAPTKKEPTFEERLRRDTLRAGYVQRKFSRNHRG----GGV 361 P+SS+ L+H G P P + + ++ + ++R R R + Sbjct: 21 PTSSTSRGTLLHH--GQKRPQPGLRVDLEQVDSGKNLTKYELIKRAIKRGERRMRSINAM 78 Query: 362 LQSEA-VKVPTELGSPQDTLEYVITVGVGSPAVQQIMTIDTGSDVSW 499 LQS + ++ P G EY++ V +G+P +DTGSD+ W Sbjct: 79 LQSSSGIETPVYAGDG----EYLMNVAIGTPDSSFSAIMDTGSDLIW 121
>CATE_RAT (P16228) Cathepsin E precursor (EC 3.4.23.34)| Length = 398 Score = 32.0 bits (71), Expect = 0.98 Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 3/72 (4%) Frame = +2 Query: 296 RDTLRAGYVQRKFSRNHRGGGVLQSEAVKVPTELGSPQDT---LEYVITVGVGSPAVQQI 466 R LRA F R+H + SE+ V + P +EY TV +GSP+ Sbjct: 35 RKKLRAQGQLSDFWRSHNLDMIEFSESCNVDKGINEPLINYLDMEYFGTVSIGSPSQNFT 94 Query: 467 MTIDTGSDVSWL 502 + DTGS W+ Sbjct: 95 VIFDTGSSNLWV 106
>PEPA3_RABIT (P27822) Pepsin-3 precursor (EC 3.4.23.1) (Pepsin III) (Pepsin A)| Length = 387 Score = 32.0 bits (71), Expect = 0.98 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +2 Query: 383 VPTELGSPQDTLEYVITVGVGSPAVQQIMTIDTGSDVSWL 502 VPTE EY T+G+G+PA + DTGS W+ Sbjct: 62 VPTETLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWV 101
>YJF1_YEAST (P47046) Hypothetical 91.3 kDa protein in TDH1-MTR4 intergenic| region Length = 822 Score = 31.2 bits (69), Expect = 1.7 Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Frame = +2 Query: 185 KGIPSSSSGATVPLNHRHGPCSPAPTKKEPT---FEERLRRDTLRAGYVQRKFSRNHRGG 355 K I S + + + H+ GP S + K+P+ F + + ++ G + ++ RN Sbjct: 217 KTISSDENSNSSVIRHKLGPISTSKCPKKPSHSHFSKLKKYNSFFLGPKENRYKRN---- 272 Query: 356 GVLQSEAVKVPTELGSPQDTLEYV 427 +A KVPTE S + +YV Sbjct: 273 ---TQQATKVPTEKKSNHRSSQYV 293
>PEPA_MACMU (P11489) Pepsin A precursor (EC 3.4.23.1)| Length = 388 Score = 31.2 bits (69), Expect = 1.7 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 6/80 (7%) Frame = +2 Query: 281 EERLRRDTLRAGYVQ---RKFSRNHRGGGVLQSEAVKVPTELGSPQDT---LEYVITVGV 442 ++ LRR+ G ++ +K +RN Q+EA + E P + +EY T+G+ Sbjct: 25 KKSLRRNLSEHGLLKDFLKKHNRNPASKYFPQTEAPTLIDE--QPLENYLDVEYFGTIGI 82 Query: 443 GSPAVQQIMTIDTGSDVSWL 502 G+PA + DTGS W+ Sbjct: 83 GTPAQDFTVIFDTGSSNLWV 102
>CARP_SYNRA (P81214) Syncephapepsin precursor (EC 3.4.23.-)| Length = 395 Score = 31.2 bits (69), Expect = 1.7 Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 5/88 (5%) Frame = +2 Query: 251 PAPTKKEPTFEERLRRDTLRAGYVQRKFSRN----HRGGGVLQSEAVKVPTELGSPQD-T 415 P K P ++ R RA ++K++R+ +G +++S A + + D Sbjct: 30 PFQLVKNPHYQANATRAIFRA---EKKYARHTAIPEQGKTIVKSAASGTGSVPMTDVDYD 86 Query: 416 LEYVITVGVGSPAVQQIMTIDTGSDVSW 499 +EY TV VG+PA + DTGS W Sbjct: 87 VEYYATVSVGTPAQSIKLDFDTGSSDLW 114
>ECM21_YEAST (P38167) Extracellular matrix protein 21| Length = 1117 Score = 30.8 bits (68), Expect = 2.2 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = +2 Query: 170 VCSEPKGIPSSSSGATVPLNHRHG-PCSPAPTKKEPTFEERLRRDTLR 310 + S P SS S + LN G P P+PTKK + ++R R T+R Sbjct: 4 ITSRPVAKNSSHSLSETDLNQSKGQPFQPSPTKKLGSMQQRRRSSTIR 51
>PEPA_CALJA (Q9N2D4) Pepsin A precursor (EC 3.4.23.1)| Length = 387 Score = 30.8 bits (68), Expect = 2.2 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = +2 Query: 416 LEYVITVGVGSPAVQQIMTIDTGSDVSWL 502 +EY T+G+G+PA + + DTGS W+ Sbjct: 73 MEYFGTIGIGTPAQEFTVIFDTGSSNLWV 101
>SDHD_BACAN (Q81S85) Probable D-serine dehydratase (EC 4.3.1.18) (D-serine| deaminase) (DSD) Length = 446 Score = 30.4 bits (67), Expect = 2.9 Identities = 19/61 (31%), Positives = 29/61 (47%) Frame = +2 Query: 248 SPAPTKKEPTFEERLRRDTLRAGYVQRKFSRNHRGGGVLQSEAVKVPTELGSPQDTLEYV 427 SP + EERL+R A Y+ + F GG+++S VK+P+ S + E Sbjct: 40 SPLSEENVKDAEERLKRF---ASYIAKVFPETKDTGGIIESPLVKIPSMKQSLEKNYEQP 96 Query: 428 I 430 I Sbjct: 97 I 97
>CHCH6_MOUSE (Q91VN4) Coiled-coil-helix-coiled-coil-helix domain-containing| protein 6 Length = 273 Score = 30.4 bits (67), Expect = 2.9 Identities = 32/94 (34%), Positives = 36/94 (38%), Gaps = 13/94 (13%) Frame = +2 Query: 140 LSTSSLKPQAVCSEPK---------GIPSSSSGATVPLNHRHGPCSPAPTKKEPTFEER- 289 LS S + CS+P G SS+ TVPL P PAPT PT Sbjct: 30 LSESVVNRMKDCSQPSAGEQLVPGFGPSSSAPVPTVPLPAISVPTVPAPTTPVPTAPSSS 89 Query: 290 ---LRRDTLRAGYVQRKFSRNHRGGGVLQSEAVK 382 L T + K GGG LQS AVK Sbjct: 90 VRGLPGGTCKGPLTDVKVPSAESGGG-LQSSAVK 122
>CARP_RHIPU (P09177) Mucorpepsin precursor (EC 3.4.23.23) (Mucor rennin)| Length = 427 Score = 30.4 bits (67), Expect = 2.9 Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 9/94 (9%) Frame = +2 Query: 248 SPAPTKKEPTFEERLRRDTLRAGYVQRKFSRNHRGGGVLQS-EAVKVPTELGSPQDTL-- 418 S P K+ +++L L + V RK+S+ G + +K E DT Sbjct: 21 SARPVSKQSDADDKLLALPLTS--VNRKYSQTKHGQQAAEKLGGIKAFAEGDGSVDTPGL 78 Query: 419 ------EYVITVGVGSPAVQQIMTIDTGSDVSWL 502 EY I V +G+P + DTGS +W+ Sbjct: 79 YDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWV 112
>CARP_RHIMI (P00799) Mucorpepsin precursor (EC 3.4.23.23) (Mucor rennin)| Length = 430 Score = 30.4 bits (67), Expect = 2.9 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +2 Query: 410 DTLEYVITVGVGSPAVQQIMTIDTGSDVSWL 502 D EY I V +G+P ++ DTGS +W+ Sbjct: 85 DLEEYAIPVSIGTPGQDFLLLFDTGSSDTWV 115
>PEPA_HUMAN (P00790) Pepsin A precursor (EC 3.4.23.1)| Length = 388 Score = 30.4 bits (67), Expect = 2.9 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +2 Query: 416 LEYVITVGVGSPAVQQIMTIDTGSDVSWL 502 +EY T+G+G+PA + DTGS W+ Sbjct: 74 MEYFGTIGIGTPAQDFTVVFDTGSSNLWV 102
>CATE_MOUSE (P70269) Cathepsin E precursor (EC 3.4.23.34)| Length = 397 Score = 30.4 bits (67), Expect = 2.9 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 3/72 (4%) Frame = +2 Query: 296 RDTLRAGYVQRKFSRNHRGGGVLQSEAVKVPTELGSPQDT---LEYVITVGVGSPAVQQI 466 R LRA +F R+H SE+ V + + P +EY T+ +G+P Sbjct: 34 RKKLRAQGQLSEFWRSHNLDMTRLSESCNVYSSVNEPLINYLDMEYFGTISIGTPPQNFT 93 Query: 467 MTIDTGSDVSWL 502 + DTGS W+ Sbjct: 94 VIFDTGSSNLWV 105
>PNCB_XYLFT (Q87EC4) Nicotinate phosphoribosyltransferase (EC 2.4.2.11)| (NAPRTase) Length = 394 Score = 30.4 bits (67), Expect = 2.9 Identities = 14/25 (56%), Positives = 18/25 (72%) Frame = -3 Query: 385 HLDRLRLQDPAAAVVPGELPLDVAG 311 HLDR LQ A++ VPGE+ LD+ G Sbjct: 89 HLDRKYLQLRASSQVPGEIELDIRG 113
>CATE_HUMAN (P14091) Cathepsin E precursor (EC 3.4.23.34)| Length = 401 Score = 30.4 bits (67), Expect = 2.9 Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 3/96 (3%) Frame = +2 Query: 224 LNHRHGPCSPAPTKKEPTFEERLRRDTLRAGYVQRKFSRNHRGGGVLQSEAVKVPTELGS 403 L G P ++ P+ +++LR + + +F ++H + +E+ + Sbjct: 14 LGEAQGSLHRVPLRRHPSLKKKLRARSQLS-----EFWKSHNLDMIQFTESCSMDQSAKE 68 Query: 404 PQDT---LEYVITVGVGSPAVQQIMTIDTGSDVSWL 502 P +EY T+ +GSP + DTGS W+ Sbjct: 69 PLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWV 104
>CARP1_RHINI (P10602) Rhizopuspepsin-1 precursor (EC 3.4.23.21) (Aspartate| protease) Length = 389 Score = 30.4 bits (67), Expect = 2.9 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%) Frame = +2 Query: 329 KFSRNHRGGGVLQSEAV-KVPTELGSPQDTLEYVITVGVGSPAVQQIMTIDTGSDVSW 499 K++R G G + +EA VP + ++ +EY V VG+P ++ + DTGS W Sbjct: 52 KYNRRKVGSGGITTEASGSVP--MVDYENDVEYYGEVTVGTPGIKLKLDFDTGSSDMW 107
>CITE1_MOUSE (P97769) Cbp/p300-interacting transactivator 1 (Melanocyte-specific| protein 1) Length = 203 Score = 30.0 bits (66), Expect = 3.7 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 3/95 (3%) Frame = +2 Query: 176 SEPKGIPSSSSGATVPLNHRHGPCSPAPTKKEPTFEERLRRDTLRAGYVQRKFSRNHRGG 355 ++ G+P+SSSG+T P+ G + P+ K P+F L A +K + ++G Sbjct: 55 AKANGVPTSSSGSTSPI----GSPTATPSSKPPSFNLH-PTPHLMASMQLQKLNSQYQGA 109 Query: 356 GVLQSEAVK---VPTELGSPQDTLEYVITVGVGSP 451 + A+ +P E Q+ + + VG GSP Sbjct: 110 AATAAAALTGAGLPGEEEPMQNWVTAPLVVG-GSP 143
>UBP32_HUMAN (Q8NFA0) Ubiquitin carboxyl-terminal hydrolase 32 (EC 3.1.2.15)| (Ubiquitin thioesterase 32) (Ubiquitin-specific-processing protease 32) (Deubiquitinating enzyme 32) (NY-REN-60 antigen) Length = 1604 Score = 30.0 bits (66), Expect = 3.7 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Frame = +2 Query: 110 SAAGEQSYKILSTSSLKPQAVCSEPKGIPSSS--SGATVPLNHRHGPCSPAPT 262 S+AGE+ + + S + S PKG PSSS SG + P + P S T Sbjct: 1349 SSAGEEDVLLSKSPSSLSANIISSPKGSPSSSRKSGTSCPSSKNSSPNSSPRT 1401
>PEPA4_MACFU (P27678) Pepsin A-4 precursor (EC 3.4.23.1) (Pepsin I/II)| Length = 388 Score = 30.0 bits (66), Expect = 3.7 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +2 Query: 416 LEYVITVGVGSPAVQQIMTIDTGSDVSWL 502 +EY T+G+G+PA + DTGS W+ Sbjct: 74 VEYFGTIGIGTPAQNFTVVFDTGSSNLWV 102
>PEPA2_MACFU (P27677) Pepsin A-2/A-3 precursor (EC 3.4.23.1) (Pepsin| III-2/III-1) Length = 388 Score = 30.0 bits (66), Expect = 3.7 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +2 Query: 416 LEYVITVGVGSPAVQQIMTIDTGSDVSWL 502 +EY T+G+G+PA + DTGS W+ Sbjct: 74 MEYFGTIGIGTPAQDFTVIFDTGSSNLWV 102
>MDC1_MACMU (Q5TM68) Mediator of DNA damage checkpoint protein 1| Length = 2173 Score = 30.0 bits (66), Expect = 3.7 Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 1/84 (1%) Frame = +2 Query: 161 PQAVCSEPKGIPSSSSGATVPLNHRHGPCS-PAPTKKEPTFEERLRRDTLRAGYVQRKFS 337 PQA C + + + T P++H+ PCS P K P S Sbjct: 1800 PQASCIKRQRATGNPGSLTAPIDHK--PCSAPLEPKSRP--------------------S 1837 Query: 338 RNHRGGGVLQSEAVKVPTELGSPQ 409 RN R G V E++ E SPQ Sbjct: 1838 RNQRWGAVRADESLTAIPEPASPQ 1861
>PEPA1_MACFU (P03954) Pepsin A-1 precursor (EC 3.4.23.1) (Pepsin III-3)| Length = 388 Score = 29.6 bits (65), Expect = 4.9 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +2 Query: 416 LEYVITVGVGSPAVQQIMTIDTGSDVSWL 502 +EY T+G+G+PA + DTGS W+ Sbjct: 74 VEYFGTIGIGTPAQDFTVIFDTGSSNLWV 102
>HXA3_HETFR (Q9IA21) Homeobox protein Hox-A3| Length = 410 Score = 29.6 bits (65), Expect = 4.9 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = +2 Query: 182 PKGIPSSSSGATVPLNHRHGPCSPAPT 262 P G + + NH HGPC P PT Sbjct: 361 PSGNMDYNGAGPMTSNHHHGPCDPHPT 387
>CARP_RHICH (P06026) Rhizopuspepsin precursor (EC 3.4.23.21)| Length = 393 Score = 29.6 bits (65), Expect = 4.9 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 2/84 (2%) Frame = +2 Query: 257 PTKKEPTFEERLRRDTLRAGYVQRKFSRNHRGGGVLQSEAV-KVP-TELGSPQDTLEYVI 430 P K P ++ + +A K N GG++ V VP T+ G+ +EY Sbjct: 31 PLAKNPNYKPSAKNAIQKAIAKYNKHKINTSTGGIVPDAGVGTVPMTDYGND---VEYYG 87 Query: 431 TVGVGSPAVQQIMTIDTGSDVSWL 502 V +G+P + + DTGS W+ Sbjct: 88 QVTIGTPGKKFNLDFDTGSSDLWI 111
>PEPA_SUNMU (P81497) Pepsin A precursor (EC 3.4.23.1)| Length = 387 Score = 29.6 bits (65), Expect = 4.9 Identities = 20/83 (24%), Positives = 34/83 (40%), Gaps = 4/83 (4%) Frame = +2 Query: 266 KEPTFEERLRRDTLRAGYVQRKFSRNHRGGGVLQSEAVKVPTELGSPQDT----LEYVIT 433 K P +++ R L + + F H + + TEL +EY T Sbjct: 19 KVPLVKKKSLRQNLIENGLLKDFLAKHNVNPASKYFPTEAATELADQPLVNYMDMEYFGT 78 Query: 434 VGVGSPAVQQIMTIDTGSDVSWL 502 +G+G+P + + DTGS W+ Sbjct: 79 IGIGTPPQEFTVIFDTGSSNLWV 101
>PEPA_RHIFE (Q9GMY7) Pepsin A precursor (EC 3.4.23.1)| Length = 386 Score = 29.6 bits (65), Expect = 4.9 Identities = 19/77 (24%), Positives = 37/77 (48%), Gaps = 3/77 (3%) Frame = +2 Query: 281 EERLRRDTLRAGYVQRKFSRNHR---GGGVLQSEAVKVPTELGSPQDTLEYVITVGVGSP 451 ++ LR++ + G +Q + + H L+ A + T+ +EY T+G+G+P Sbjct: 25 KKSLRKNLMEQGLLQ-DYLKTHSINPASKYLKEAASMMATQPLENYMDMEYFGTIGIGTP 83 Query: 452 AVQQIMTIDTGSDVSWL 502 + + DTGS W+ Sbjct: 84 PQEFTVIFDTGSSNLWV 100
>NEP1_NEPDI (P69476) Aspartic proteinase nepenthesin-1 (EC 3.4.23.-)| (Nepenthesin-I) (Fragments) Length = 164 Score = 29.3 bits (64), Expect = 6.4 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +2 Query: 419 EYVITVGVGSPAVQQIMTIDTGSDVSW 499 EY++ + +G+PA +DTGSD+ W Sbjct: 16 EYLMXLSIGTPAQPFSAIMDTGSDLIW 42
>NEP1_NEPGR (Q766C3) Aspartic proteinase nepenthesin-1 precursor (EC 3.4.23.-)| (Nepenthesin-I) Length = 437 Score = 29.3 bits (64), Expect = 6.4 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = +2 Query: 419 EYVITVGVGSPAVQQIMTIDTGSDVSW 499 EY++ + +G+PA +DTGSD+ W Sbjct: 94 EYLMNLSIGTPAQPFSAIMDTGSDLIW 120
>PEPA_PIG (P00791) Pepsin A precursor (EC 3.4.23.1)| Length = 386 Score = 29.3 bits (64), Expect = 6.4 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +2 Query: 419 EYVITVGVGSPAVQQIMTIDTGSDVSWL 502 EY T+G+G+PA + DTGS W+ Sbjct: 72 EYFGTIGIGTPAQDFTVIFDTGSSNLWV 99
>HXD3_CHICK (O93353) Homeobox protein Hox-D3| Length = 413 Score = 28.9 bits (63), Expect = 8.3 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Frame = +2 Query: 176 SEPKGIPSSSSGA-TVPLNHRHGPCSPAPTKKEPT 277 S P SGA + NH HGPC P PT + T Sbjct: 361 SHPPSANMDYSGAGPMGNNHHHGPCDPHPTYTDLT 395
>HXA3_CHICK (Q7T3J5) Homeobox protein Hox-A3| Length = 413 Score = 28.9 bits (63), Expect = 8.3 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%) Frame = +2 Query: 176 SEPKGIPSSSSGA-TVPLNHRHGPCSPAPTKKEPT 277 S P SGA + NH HGPC P PT + T Sbjct: 361 SHPPSANMDYSGAGPMGNNHHHGPCDPHPTYTDLT 395
>AROC_DESVH (Q72DN5) Chorismate synthase (EC 4.2.3.5)| (5-enolpyruvylshikimate-3-phosphate phospholyase) Length = 354 Score = 28.9 bits (63), Expect = 8.3 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%) Frame = +2 Query: 353 GGVLQSEAVKVPTELGSPQ-DTLEYVITVGVGSPAVQQIMTIDTGSDVSWLH 505 GG++Q EA VP LG P D L+ V+ + S + + + G + + +H Sbjct: 203 GGIVQVEATGVPAGLGEPVFDKLDAVLAYALMSVGAVKGVEVGAGFEAARMH 254
>PMPB_CHLTR (O84418) Probable outer membrane protein pmpB precursor| (Polymorphic membrane protein B) Length = 1754 Score = 28.9 bits (63), Expect = 8.3 Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 2/92 (2%) Frame = +2 Query: 107 ASAAGEQSYKILSTSSLKPQAVCSEPKGIPSSSSGATVPLNHRHGPCSPAPTKKEPTFEE 286 A A + + +TS+ + V S PSSS+ +++ L SPA + KE T + Sbjct: 638 ADTAEQPAAASAATSTPESAPVVSTALSTPSSSTVSSLTLLAASSQASPATSNKE-TQDP 696 Query: 287 RLRRDTLRAGYVQRKFSRN--HRGGGVLQSEA 376 D L V S+N +GGG+ +A Sbjct: 697 NADTDLLIDYVVDTTISKNTAKKGGGIYAKKA 728
>ASP1_ORYSA (Q6YNY7) Aspartic proteinase Asp1 precursor (EC 3.4.23.-) (OsAsp1)| (Nucellin-like protein) Length = 410 Score = 28.9 bits (63), Expect = 8.3 Identities = 10/27 (37%), Positives = 17/27 (62%) Frame = +2 Query: 422 YVITVGVGSPAVQQIMTIDTGSDVSWL 502 + +T+ + PA + IDTGS ++WL Sbjct: 38 FFVTMNISDPAKPYFLDIDTGSTLTWL 64
>PEPA_CANFA (Q9GMY6) Pepsin A precursor (EC 3.4.23.1)| Length = 386 Score = 28.9 bits (63), Expect = 8.3 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = +2 Query: 416 LEYVITVGVGSPAVQQIMTIDTGSDVSWL 502 +EY T+G+G+P + + DTGS W+ Sbjct: 72 MEYFGTIGIGTPPQEFTVIFDTGSSNLWV 100 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,392,129 Number of Sequences: 219361 Number of extensions: 1293667 Number of successful extensions: 5165 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 4871 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5162 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
