ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet112b12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55685.1|BLYLDHA13 Hordeum vulgare L-lactate dehydrogenase mRNA, complete cds Length = 1298 Score = 799 bits (403), Expect = 0.0 Identities = 420/425 (98%), Gaps = 3/425 (0%) Strand = Plus / Plus Query: 54 ccgcatttgatcggaccagcgtcccattccacccccttcccaccctgtcgaggatgcaca 113 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1 ccgcatttgatcggaccagcgtcccattccacccccttcccaccccgtcgaggatgcaca 60 Query: 114 aggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttcc 173 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 61 aggcgtcgtcgctgtcggagctcggcttcgacgccgggggcgcctcgtcgggcttcttcc 120 Query: 174 ggccggtggccgacggctgcccggccaccccgacctcctccgccgtcccgcaccgccgcc 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ggccggtggccgacggctgcccggccaccccgacctcctccgccgtcccgcaccgccgcc 180 Query: 234 tcaccaagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcc 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tcaccaagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcc 240 Query: 294 tcacccagaacctggccgacgagatcgcgctcgtcgacgcgctccccgacaagctccgcg 353 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tcacccagaacctggccgacgagatcgcgctcgtcgacgcgctccccgacaagctccgcg 300 Query: 354 gcgaggcgctcgacctgcagcacgccgccgccttcctcccgcgcgtccgcatcgcctccg 413 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 301 gcgaggcgctcgacctgcagcacgccgccgccttcctcccgcgcgtccgcat---ctccg 357 Query: 414 gcaccgacgccgccgtcaccaagaactccgacctcgtcatcgtcacggccggggccaggc 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 gcaccgacgccgccgtcaccaagaactccgacctcgtcatcgtcacggccggggccaggc 417 Query: 474 agatc 478 ||||| Sbjct: 418 agatc 422
>gb|M55684.1|BLYLDHB12 Hordeum vulgare L-lactate dehydrogenase mRNA, complete cds Length = 1166 Score = 440 bits (222), Expect = e-120 Identities = 306/334 (91%) Strand = Plus / Plus Query: 145 cgccgggggcgcctcgtcgggcttcttccggccggtggccgacggctgcccggccacccc 204 |||||||| ||||||||||||||||||||| ||||||| |||||||||||| ||| | Sbjct: 1 cgccggggacgcctcgtcgggcttcttccgcgcggtggcggacggctgcccgatcacgca 60 Query: 205 gacctcctccgccgtcccgcaccgccgcctcaccaagatctccgtcatcggggccggcaa 264 ||||||| | ||| |||||||||||||||||||||| | ||||||||||| |||||||| Sbjct: 61 cacctcctgctccgccccgcaccgccgcctcaccaaggtgtccgtcatcggcgccggcaa 120 Query: 265 cgtgggcatggccatcgcgcagaccatcctcacccagaacctggccgacgagatcgcgct 324 ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| Sbjct: 121 cgtgggcatggccatcgcgcagaccatcctcacgcagaacctggcggacgagatcgcgct 180 Query: 325 cgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctgcagcacgccgccgc 384 || ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggtggacgccctccccgacaagctccgcggcgaggcgctcgacctgcagcacgccgccgc 240 Query: 385 cttcctcccgcgcgtccgcatcgcctccggcaccgacgccgccgtcaccaagaactccga 444 |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| || Sbjct: 241 gttcctcccgcgcgtccgcatcgtctccggcacggacgccgccgtcaccaagaactcgga 300 Query: 445 cctcgtcatcgtcacggccggggccaggcagatc 478 |||| || |||||||||| || |||||||||||| Sbjct: 301 cctcatcgtcgtcacggcgggcgccaggcagatc 334
>emb|Z11754.1|ZMLACDEHG Z.mays gene for lactate dehydrogenase Length = 2999 Score = 157 bits (79), Expect = 4e-35 Identities = 193/231 (83%) Strand = Plus / Plus Query: 248 gtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctg 307 |||||||| || ||||||||||| |||||||||||||||||||||||||| | ||||| Sbjct: 1301 gtcatcggcgcgggcaacgtggggatggccatcgcgcagaccatcctcacgcgcgacctg 1360 Query: 308 gccgacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgac 367 ||||||||||||||||| || |||||| |||| |||||||||||||| ||| ||| ||| Sbjct: 1361 gccgacgagatcgcgctggtggacgcggtcccggacaagctccgcggggagatgctggac 1420 Query: 368 ctgcagcacgccgccgccttcctcccgcgcgtccgcatcgcctccggcaccgacgccgcc 427 ||||||||||| || || ||||| |||||| ||| ||| |||||||||||| || Sbjct: 1421 ctgcagcacgcggcggcgttcctgccgcgcacgcgcctcgtgtccggcaccgacatgtcc 1480 Query: 428 gtcaccaagaactccgacctcgtcatcgtcacggccggggccaggcagatc 478 || |||| | ||| ||||| |||||||| ||||||||||| |||||||| Sbjct: 1481 gtgaccaggggctcggacctggtcatcgtgacggccggggcgcggcagatc 1531 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 122 tcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttccg 174 ||||| || |||||||||||||||||||| | ||| ||||||||||||||||| Sbjct: 1181 tcgctctccgagctgggcttcgacgccggcgacgcgtcgtcgggcttcttccg 1233
>gb|AY109690.1| Zea mays CL2158_1 mRNA sequence Length = 1496 Score = 157 bits (79), Expect = 4e-35 Identities = 193/231 (83%) Strand = Plus / Plus Query: 248 gtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctg 307 |||||||| || ||||||||||| |||||||||||||||||||||||||| | ||||| Sbjct: 204 gtcatcggcgcgggcaacgtggggatggccatcgcgcagaccatcctcacgcgcgacctg 263 Query: 308 gccgacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgac 367 ||||||||||||||||| || |||||| |||| |||||||||||||| ||| ||| ||| Sbjct: 264 gccgacgagatcgcgctggtggacgcggtcccggacaagctccgcggggagatgctggac 323 Query: 368 ctgcagcacgccgccgccttcctcccgcgcgtccgcatcgcctccggcaccgacgccgcc 427 ||||||||||| || || ||||| |||||| ||| ||| |||||||||||| || Sbjct: 324 ctgcagcacgcggcggcgttcctgccgcgcacgcgcctcgtgtccggcaccgacatgtcc 383 Query: 428 gtcaccaagaactccgacctcgtcatcgtcacggccggggccaggcagatc 478 || |||| | ||| ||||| |||||||| ||||||||||| |||||||| Sbjct: 384 gtgaccaggggctcggacctggtcatcgtgacggccggggcgcggcagatc 434 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 122 tcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttccg 174 ||||| || |||||||||||||||||||| | ||| ||||||||||||||||| Sbjct: 84 tcgctctccgagctgggcttcgacgccggcgacgcgtcgtcgggcttcttccg 136
>ref|XM_463814.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1602 Score = 133 bits (67), Expect = 6e-28 Identities = 145/171 (84%) Strand = Plus / Minus Query: 251 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 310 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 1165 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 1106 Query: 311 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 370 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 1105 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 1046 Query: 371 cagcacgccgccgccttcctcccgcgcgtccgcatcgcctccggcaccgac 421 |||||||| || || |||||||| ||||||||| ||| ||||| ||||||| Sbjct: 1045 cagcacgcggcggcgttcctcccccgcgtccgcctcgtctccgacaccgac 995 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 113 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 172 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 1291 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 1232 Query: 173 cggccggtggccgacggc 190 || |||||||| |||||| Sbjct: 1231 cgtccggtggcggacggc 1214
>ref|XM_463815.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1414 Score = 133 bits (67), Expect = 6e-28 Identities = 145/171 (84%) Strand = Plus / Plus Query: 251 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 310 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 243 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 302 Query: 311 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 370 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 303 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 362 Query: 371 cagcacgccgccgccttcctcccgcgcgtccgcatcgcctccggcaccgac 421 |||||||| || || |||||||| ||||||||| ||| ||||| ||||||| Sbjct: 363 cagcacgcggcggcgttcctcccccgcgtccgcctcgtctccgacaccgac 413 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 113 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 172 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 117 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 176 Query: 173 cggccggtggccgacggc 190 || |||||||| |||||| Sbjct: 177 cgtccggtggcggacggc 194
>ref|XM_506679.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1212_C06.24 mRNA Length = 1509 Score = 133 bits (67), Expect = 6e-28 Identities = 145/171 (84%) Strand = Plus / Plus Query: 251 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 310 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 418 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 477 Query: 311 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 370 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 478 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 537 Query: 371 cagcacgccgccgccttcctcccgcgcgtccgcatcgcctccggcaccgac 421 |||||||| || || |||||||| ||||||||| ||| ||||| ||||||| Sbjct: 538 cagcacgcggcggcgttcctcccccgcgtccgcctcgtctccgacaccgac 588 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 113 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 172 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 292 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 351 Query: 173 cggccggtggccgacggc 190 || |||||||| |||||| Sbjct: 352 cgtccggtggcggacggc 369
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 133 bits (67), Expect = 6e-28 Identities = 145/171 (84%) Strand = Plus / Plus Query: 251 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 310 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 295740 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 295799 Query: 311 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 370 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 295800 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 295859 Query: 371 cagcacgccgccgccttcctcccgcgcgtccgcatcgcctccggcaccgac 421 |||||||| || || |||||||| ||||||||| ||| ||||| ||||||| Sbjct: 295860 cagcacgcggcggcgttcctcccccgcgtccgcctcgtctccgacaccgac 295910 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 113 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 172 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 295614 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 295673 Query: 173 cggccggtggccgacggc 190 || |||||||| |||||| Sbjct: 295674 cgtccggtggcggacggc 295691 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 acgccgccgccttcctcccgc 395 ||||||||||||||||||||| Sbjct: 764984 acgccgccgccttcctcccgc 765004 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 ccgccgccttcctcccgcgcgtcc 401 |||||||||||||||| ||||||| Sbjct: 29959836 ccgccgccttcctcccccgcgtcc 29959813
>dbj|AP004851.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1359_D06 Length = 146805 Score = 133 bits (67), Expect = 6e-28 Identities = 145/171 (84%) Strand = Plus / Plus Query: 251 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 310 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 24524 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 24583 Query: 311 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 370 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 24584 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 24643 Query: 371 cagcacgccgccgccttcctcccgcgcgtccgcatcgcctccggcaccgac 421 |||||||| || || |||||||| ||||||||| ||| ||||| ||||||| Sbjct: 24644 cagcacgcggcggcgttcctcccccgcgtccgcctcgtctccgacaccgac 24694 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 113 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 172 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 24398 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 24457 Query: 173 cggccggtggccgacggc 190 || |||||||| |||||| Sbjct: 24458 cgtccggtggcggacggc 24475
>dbj|AP004049.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1212_C06 Length = 110989 Score = 133 bits (67), Expect = 6e-28 Identities = 145/171 (84%) Strand = Plus / Plus Query: 251 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 310 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 105715 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 105774 Query: 311 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 370 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 105775 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 105834 Query: 371 cagcacgccgccgccttcctcccgcgcgtccgcatcgcctccggcaccgac 421 |||||||| || || |||||||| ||||||||| ||| ||||| ||||||| Sbjct: 105835 cagcacgcggcggcgttcctcccccgcgtccgcctcgtctccgacaccgac 105885 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 113 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 172 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 105589 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 105648 Query: 173 cggccggtggccgacggc 190 || |||||||| |||||| Sbjct: 105649 cgtccggtggcggacggc 105666
>dbj|AP006720.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, clone:OJA1212_C06 Length = 113554 Score = 133 bits (67), Expect = 6e-28 Identities = 145/171 (84%) Strand = Plus / Plus Query: 251 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 310 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 108280 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 108339 Query: 311 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 370 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 108340 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 108399 Query: 371 cagcacgccgccgccttcctcccgcgcgtccgcatcgcctccggcaccgac 421 |||||||| || || |||||||| ||||||||| ||| ||||| ||||||| Sbjct: 108400 cagcacgcggcggcgttcctcccccgcgtccgcctcgtctccgacaccgac 108450 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 113 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 172 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 108154 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 108213 Query: 173 cggccggtggccgacggc 190 || |||||||| |||||| Sbjct: 108214 cgtccggtggcggacggc 108231
>dbj|AK106891.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-G06, full insert sequence Length = 1601 Score = 133 bits (67), Expect = 6e-28 Identities = 145/171 (84%) Strand = Plus / Minus Query: 251 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 310 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 1164 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 1105 Query: 311 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 370 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 1104 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 1045 Query: 371 cagcacgccgccgccttcctcccgcgcgtccgcatcgcctccggcaccgac 421 |||||||| || || |||||||| ||||||||| ||| ||||| ||||||| Sbjct: 1044 cagcacgcggcggcgttcctcccccgcgtccgcctcgtctccgacaccgac 994 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Minus Query: 113 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 172 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 1290 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 1231 Query: 173 cggccggtggccgacggc 190 || |||||||| |||||| Sbjct: 1230 cgtccggtggcggacggc 1213
>dbj|AK105416.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-A01, full insert sequence Length = 1414 Score = 133 bits (67), Expect = 6e-28 Identities = 145/171 (84%) Strand = Plus / Plus Query: 251 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 310 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 243 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 302 Query: 311 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 370 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 303 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 362 Query: 371 cagcacgccgccgccttcctcccgcgcgtccgcatcgcctccggcaccgac 421 |||||||| || || |||||||| ||||||||| ||| ||||| ||||||| Sbjct: 363 cagcacgcggcggcgttcctcccccgcgtccgcctcgtctccgacaccgac 413 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 113 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 172 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 117 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 176 Query: 173 cggccggtggccgacggc 190 || |||||||| |||||| Sbjct: 177 cgtccggtggcggacggc 194
>dbj|AK103257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124A12, full insert sequence Length = 1510 Score = 133 bits (67), Expect = 6e-28 Identities = 145/171 (84%) Strand = Plus / Plus Query: 251 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 310 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 418 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 477 Query: 311 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 370 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 478 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 537 Query: 371 cagcacgccgccgccttcctcccgcgcgtccgcatcgcctccggcaccgac 421 |||||||| || || |||||||| ||||||||| ||| ||||| ||||||| Sbjct: 538 cagcacgcggcggcgttcctcccccgcgtccgcctcgtctccgacaccgac 588 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 113 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 172 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 292 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 351 Query: 173 cggccggtggccgacggc 190 || |||||||| |||||| Sbjct: 352 cgtccggtggcggacggc 369
>dbj|D13817.1|RICLDH Oryza sativa (japonica cultivar-group) mRNA for lactate dehydrogenase, complete cds Length = 1412 Score = 133 bits (67), Expect = 6e-28 Identities = 145/171 (84%) Strand = Plus / Plus Query: 251 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacctggcc 310 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | || |||| Sbjct: 243 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggacatggcg 302 Query: 311 gacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacctg 370 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| |||||| Sbjct: 303 gacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacctg 362 Query: 371 cagcacgccgccgccttcctcccgcgcgtccgcatcgcctccggcaccgac 421 |||||||| || || |||||||| ||||||||| ||| ||||| ||||||| Sbjct: 363 cagcacgcggcggcgttcctcccccgcgtccgcctcgtctccgacaccgac 413 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 113 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 172 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 117 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 176 Query: 173 cggccggtggccgacggc 190 || |||||||| |||||| Sbjct: 177 cgtccggtggcggacggc 194
>dbj|D16685.1|RICLT36RGL Oryza sativa (japonica cultivar-group) gene for lactate dehydrogenase, complete cds Length = 5857 Score = 119 bits (60), Expect = 9e-24 Identities = 145/172 (84%), Gaps = 1/172 (0%) Strand = Plus / Plus Query: 251 atcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccagaacc-tggc 309 ||||| || ||||||||||| ||||| ||||||||||||||||| |||| | | | |||| Sbjct: 2634 atcggcgcgggcaacgtggggatggcgatcgcgcagaccatcctgacccgggagcatggc 2693 Query: 310 cgacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcgaggcgctcgacct 369 |||||||||||||| || |||||| | || |||||||| ||||| ||| ||| ||||| Sbjct: 2694 ggacgagatcgcgctggtggacgcggtgccggacaagctgcgcggggagatgctggacct 2753 Query: 370 gcagcacgccgccgccttcctcccgcgcgtccgcatcgcctccggcaccgac 421 ||||||||| || || |||||||| ||||||||| ||| ||||| ||||||| Sbjct: 2754 gcagcacgcggcggcgttcctcccccgcgtccgcctcgtctccgacaccgac 2805 Score = 83.8 bits (42), Expect = 5e-13 Identities = 69/78 (88%) Strand = Plus / Plus Query: 113 aaggcgtcgtcgctgtcggagctgggcttcgacgccgggggcgcctcgtcgggcttcttc 172 ||||| ||||| |||||||||||||| |||||||| | |||||| |||||||| |||||| Sbjct: 2508 aaggcttcgtctctgtcggagctggggttcgacgcggagggcgcgtcgtcggggttcttc 2567 Query: 173 cggccggtggccgacggc 190 || |||||||| |||||| Sbjct: 2568 cgtccggtggcggacggc 2585
>ref|NM_185321.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1508 Score = 115 bits (58), Expect = 1e-22 Identities = 136/162 (83%) Strand = Plus / Plus Query: 238 caagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcac 297 ||||||||| || ||||| || ||||||||||||||||||||||||||||| ||||| || Sbjct: 278 caagatctcggtgatcggcgcgggcaacgtgggcatggccatcgcgcagacgatcctgac 337 Query: 298 ccagaacctggccgacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcga 357 ||| |||| ||||||||||||| ||| |||||||| | | |||||| | || ||||| Sbjct: 338 gcaggacctcgccgacgagatcgtgctgatcgacgcggtggcggacaaggtgcggggcga 397 Query: 358 ggcgctcgacctgcagcacgccgccgccttcctcccgcgcgt 399 | ||| |||||||||||||| || || |||||||| ||||| Sbjct: 398 gatgctggacctgcagcacgcggcggcgttcctcccccgcgt 439 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 113 aaggcgtcgtcgctgtcggagctgggcttcgacgccg 149 ||||||||||||||||| |||||||| |||||||||| Sbjct: 168 aaggcgtcgtcgctgtctgagctggggttcgacgccg 204
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 115 bits (58), Expect = 1e-22 Identities = 136/162 (83%) Strand = Plus / Minus Query: 238 caagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcac 297 ||||||||| || ||||| || ||||||||||||||||||||||||||||| ||||| || Sbjct: 347239 caagatctcggtgatcggcgcgggcaacgtgggcatggccatcgcgcagacgatcctgac 347180 Query: 298 ccagaacctggccgacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcga 357 ||| |||| ||||||||||||| ||| |||||||| | | |||||| | || ||||| Sbjct: 347179 gcaggacctcgccgacgagatcgtgctgatcgacgcggtggcggacaaggtgcggggcga 347120 Query: 358 ggcgctcgacctgcagcacgccgccgccttcctcccgcgcgt 399 | ||| |||||||||||||| || || |||||||| ||||| Sbjct: 347119 gatgctggacctgcagcacgcggcggcgttcctcccccgcgt 347078 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 113 aaggcgtcgtcgctgtcggagctgggcttcgacgccg 149 ||||||||||||||||| |||||||| |||||||||| Sbjct: 347349 aaggcgtcgtcgctgtctgagctggggttcgacgccg 347313 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 tcccattccacccccttccc 94 |||||||||||||||||||| Sbjct: 28882402 tcccattccacccccttccc 28882421
>dbj|AP001129.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0644B06 Length = 194509 Score = 115 bits (58), Expect = 1e-22 Identities = 136/162 (83%) Strand = Plus / Minus Query: 238 caagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcac 297 ||||||||| || ||||| || ||||||||||||||||||||||||||||| ||||| || Sbjct: 57192 caagatctcggtgatcggcgcgggcaacgtgggcatggccatcgcgcagacgatcctgac 57133 Query: 298 ccagaacctggccgacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcga 357 ||| |||| ||||||||||||| ||| |||||||| | | |||||| | || ||||| Sbjct: 57132 gcaggacctcgccgacgagatcgtgctgatcgacgcggtggcggacaaggtgcggggcga 57073 Query: 358 ggcgctcgacctgcagcacgccgccgccttcctcccgcgcgt 399 | ||| |||||||||||||| || || |||||||| ||||| Sbjct: 57072 gatgctggacctgcagcacgcggcggcgttcctcccccgcgt 57031 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 113 aaggcgtcgtcgctgtcggagctgggcttcgacgccg 149 ||||||||||||||||| |||||||| |||||||||| Sbjct: 57302 aaggcgtcgtcgctgtctgagctggggttcgacgccg 57266
>dbj|AK106504.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-F11, full insert sequence Length = 1508 Score = 115 bits (58), Expect = 1e-22 Identities = 136/162 (83%) Strand = Plus / Plus Query: 238 caagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcac 297 ||||||||| || ||||| || ||||||||||||||||||||||||||||| ||||| || Sbjct: 278 caagatctcggtgatcggcgcgggcaacgtgggcatggccatcgcgcagacgatcctgac 337 Query: 298 ccagaacctggccgacgagatcgcgctcgtcgacgcgctccccgacaagctccgcggcga 357 ||| |||| ||||||||||||| ||| |||||||| | | |||||| | || ||||| Sbjct: 338 gcaggacctcgccgacgagatcgtgctgatcgacgcggtggcggacaaggtgcggggcga 397 Query: 358 ggcgctcgacctgcagcacgccgccgccttcctcccgcgcgt 399 | ||| |||||||||||||| || || |||||||| ||||| Sbjct: 398 gatgctggacctgcagcacgcggcggcgttcctcccccgcgt 439 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 113 aaggcgtcgtcgctgtcggagctgggcttcgacgccg 149 ||||||||||||||||| |||||||| |||||||||| Sbjct: 168 aaggcgtcgtcgctgtctgagctggggttcgacgccg 204
>gb|AC138087.17| Medicago truncatula clone mth2-22p8, complete sequence Length = 130194 Score = 81.8 bits (41), Expect = 2e-12 Identities = 53/57 (92%) Strand = Plus / Plus Query: 238 caagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcct 294 |||||||||||||||||| ||||||||||| ||||||||||| || ||||||||||| Sbjct: 127825 caagatctccgtcatcggcgccggcaacgtcggcatggccattgctcagaccatcct 127881
>emb|Y10603.1|LELDH2GN Lycopersicon esculentum ldh2 gene Length = 3608 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 239 aagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacc 298 ||||||||||||||||| | ||||||||| || ||||||||||| || || ||||| || Sbjct: 978 aagatctccgtcatcggcgtcggcaacgtcggaatggccatcgctcaaacaatccttact 1037 Query: 299 cagaacctggccgacgagatcgcgctcgtcgacgc 333 ||| | || | ||||||| | || ||||||||||| Sbjct: 1038 caggatctcgtcgacgagctagcactcgtcgacgc 1072
>emb|Y08888.1|LELDH2 Lycopersicon esculentum mRNA for L-lactate dehydrogenase, clone LDH2 Length = 1449 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 239 aagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacc 298 ||||||||||||||||| | ||||||||| || ||||||||||| || || ||||| || Sbjct: 151 aagatctccgtcatcggcgtcggcaacgtcggaatggccatcgctcaaacaatccttact 210 Query: 299 cagaacctggccgacgagatcgcgctcgtcgacgc 333 ||| | || | ||||||| | || ||||||||||| Sbjct: 211 caggatctcgtcgacgagctagcactcgtcgacgc 245
>gb|AC167967.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940144D9, complete sequence Length = 114276 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 332 gcgctccccgacaagctccgcggcgagg 359 |||||| ||||||||||||||||||||| Sbjct: 29779 gcgctcgccgacaagctccgcggcgagg 29806
>ref|NM_117832.2| Arabidopsis thaliana L-lactate dehydrogenase/ lactate dehydrogenase/ oxidoreductase AT4G17260 mRNA, complete cds Length = 1261 Score = 46.1 bits (23), Expect = 0.10 Identities = 74/91 (81%) Strand = Plus / Plus Query: 243 tctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccaga 302 |||||||| |||| | ||| ||||| || |||||||| || || ||||||||||| || Sbjct: 193 tctccgtcgtcggagtcggaaacgtcggaatggccatagctcaaaccatcctcactcaag 252 Query: 303 acctggccgacgagatcgcgctcgtcgacgc 333 | || || ||||||||||| ||||| ||||| Sbjct: 253 atctcgcagacgagatcgctctcgttgacgc 283
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 310 cgacgagatcgcgctcgtcgacgcgct 336 |||| |||||||||||||||||||||| Sbjct: 1871261 cgacaagatcgcgctcgtcgacgcgct 1871287 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 cctggccgacgagatcgcgc 323 |||||||||||||||||||| Sbjct: 3612152 cctggccgacgagatcgcgc 3612133
>emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 8 Length = 207674 Score = 46.1 bits (23), Expect = 0.10 Identities = 74/91 (81%) Strand = Plus / Plus Query: 243 tctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccaga 302 |||||||| |||| | ||| ||||| || |||||||| || || ||||||||||| || Sbjct: 38956 tctccgtcgtcggagtcggaaacgtcggaatggccatagctcaaaccatcctcactcaag 39015 Query: 303 acctggccgacgagatcgcgctcgtcgacgc 333 | || || ||||||||||| ||||| ||||| Sbjct: 39016 atctcgcagacgagatcgctctcgttgacgc 39046
>emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 46 Length = 198788 Score = 46.1 bits (23), Expect = 0.10 Identities = 74/91 (81%) Strand = Plus / Plus Query: 243 tctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccaga 302 |||||||| |||| | ||| ||||| || |||||||| || || ||||||||||| || Sbjct: 28321 tctccgtcgtcggagtcggaaacgtcggaatggccatagctcaaaccatcctcactcaag 28380 Query: 303 acctggccgacgagatcgcgctcgtcgacgc 333 | || || ||||||||||| ||||| ||||| Sbjct: 28381 atctcgcagacgagatcgctctcgttgacgc 28411
>emb|BX826983.1|CNS0A35J Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB83ZE03 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1207 Score = 46.1 bits (23), Expect = 0.10 Identities = 74/91 (81%) Strand = Plus / Plus Query: 243 tctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccaga 302 |||||||| |||| | ||| ||||| || |||||||| || || ||||||||||| || Sbjct: 181 tctccgtcgtcggagtcggaaacgtcggaatggccatagctcaaaccatcctcactcaag 240 Query: 303 acctggccgacgagatcgcgctcgtcgacgc 333 | || || ||||||||||| ||||| ||||| Sbjct: 241 atctcgcagacgagatcgctctcgttgacgc 271
>gb|AY087276.1| Arabidopsis thaliana clone 33509 mRNA, complete sequence Length = 1261 Score = 46.1 bits (23), Expect = 0.10 Identities = 74/91 (81%) Strand = Plus / Plus Query: 243 tctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccaga 302 |||||||| |||| | ||| ||||| || |||||||| || || ||||||||||| || Sbjct: 193 tctccgtcgtcggagtcggaaacgtcggaatggccatagctcaaaccatcctcactcaag 252 Query: 303 acctggccgacgagatcgcgctcgtcgacgc 333 | || || ||||||||||| ||||| ||||| Sbjct: 253 atctcgcagacgagatcgctctcgttgacgc 283
>gb|AF043130.1|AF043130 Arabidopsis thaliana lactate dehydrogenase (LDH1) gene, complete cds Length = 2343 Score = 46.1 bits (23), Expect = 0.10 Identities = 74/91 (81%) Strand = Plus / Plus Query: 243 tctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacccaga 302 |||||||| |||| | ||| ||||| || |||||||| || || ||||||||||| || Sbjct: 692 tctccgtcgtcggagtcggaaacgtcggaatggccatagctcaaaccatcctcactcaag 751 Query: 303 acctggccgacgagatcgcgctcgtcgacgc 333 | || || ||||||||||| ||||| ||||| Sbjct: 752 atctcgcagacgagatcgctctcgttgacgc 782
>gb|AY658893.1| Synthetic construct Peudomonas aeruginosa clone FLH047616.01F PA2017 gene, partial cds Length = 930 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 ccgcggcgaggcgctcgacctg 370 |||||||||||||||||||||| Sbjct: 609 ccgcggcgaggcgctcgacctg 630
>gb|AF067859.1| Solanum tuberosum lactate dehydrogenase-2 (LDH-2) mRNA, complete cds Length = 1462 Score = 44.1 bits (22), Expect = 0.41 Identities = 76/94 (80%) Strand = Plus / Plus Query: 239 aagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcctcacc 298 ||||||||||| ||||| | |||||| || || ||||||||||| || || ||||| || Sbjct: 131 aagatctccgtgatcggcgtcggcaatgtcgggatggccatcgcccaaacaatccttact 190 Query: 299 cagaacctggccgacgagatcgcgctcgtcgacg 332 ||| | || | ||||||| | || |||||||||| Sbjct: 191 caggatcttgtcgacgagctagcactcgtcgacg 224
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 357 aggcgctcgacctgcagcacgc 378 |||||||||||||||||||||| Sbjct: 4649423 aggcgctcgacctgcagcacgc 4649444
>emb|AL357793.6| Human DNA sequence from clone RP11-98G13 on chromosome 1 Contains a novel gene and part of a novel gene, complete sequence Length = 145630 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 81 tccacccccttcccaccctgtc 102 |||||||||||||||||||||| Sbjct: 119524 tccacccccttcccaccctgtc 119503
>gb|AE004628.1| Pseudomonas aeruginosa PAO1, section 189 of 529 of the complete genome Length = 10962 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 ccgcggcgaggcgctcgacctg 370 |||||||||||||||||||||| Sbjct: 2509 ccgcggcgaggcgctcgacctg 2530
>gb|AF147719.1|AF147719 Pseudomonas aeruginosa transcriptional regulator (amrR), putative membrane fusion protein (amrA), and putative RND transporter (amrB) genes, complete cds Length = 6000 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 349 ccgcggcgaggcgctcgacctg 370 |||||||||||||||||||||| Sbjct: 5925 ccgcggcgaggcgctcgacctg 5904
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 175 gccggtggccgacggctgcccggcca 200 |||||||||||||||| ||||||||| Sbjct: 3307649 gccggtggccgacggcagcccggcca 3307674
>dbj|AB015853.1| Pseudomonas aeruginosa gene for MexX and MexY, complete cds Length = 5461 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 349 ccgcggcgaggcgctcgacctg 370 |||||||||||||||||||||| Sbjct: 5032 ccgcggcgaggcgctcgacctg 5011
>ref|XM_463858.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1161 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 375 acgccgccgccttcctcccgc 395 ||||||||||||||||||||| Sbjct: 40 acgccgccgccttcctcccgc 20
>gb|AC128644.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0009F15, complete sequence Length = 142289 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 368 ctgcagcacgccgccgccttcctcc 392 |||||||||||||||||| |||||| Sbjct: 35016 ctgcagcacgccgccgccgtcctcc 34992
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 401 cgcatcgcctccggcaccgac 421 ||||||||||||||||||||| Sbjct: 3224379 cgcatcgcctccggcaccgac 3224359 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 316 gatcgcgctcgtcgacgcgct 336 ||||||||||||||||||||| Sbjct: 2359184 gatcgcgctcgtcgacgcgct 2359204 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 agatcgcgctcgtcgacgcg 334 |||||||||||||||||||| Sbjct: 912475 agatcgcgctcgtcgacgcg 912494
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 gatcgcgctcgtcgacgcgct 336 ||||||||||||||||||||| Sbjct: 1137266 gatcgcgctcgtcgacgcgct 1137246 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 401 cgcatcgcctccggcaccgac 421 ||||||||||||||||||||| Sbjct: 756777 cgcatcgcctccggcaccgac 756797 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 agatcgcgctcgtcgacgcg 334 |||||||||||||||||||| Sbjct: 1955074 agatcgcgctcgtcgacgcg 1955093
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene cluster, complete sequence Length = 138203 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 tcgcctccggcaccgacgccg 425 ||||||||||||||||||||| Sbjct: 107307 tcgcctccggcaccgacgccg 107287
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome Length = 2971517 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 301 gaacctggccgacgagatcgc 321 ||||||||||||||||||||| Sbjct: 2632750 gaacctggccgacgagatcgc 2632730
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 gatcgcgctcgtcgacgcgct 336 ||||||||||||||||||||| Sbjct: 1018226 gatcgcgctcgtcgacgcgct 1018206 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 401 cgcatcgcctccggcaccgac 421 ||||||||||||||||||||| Sbjct: 565432 cgcatcgcctccggcaccgac 565452 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 agatcgcgctcgtcgacgcg 334 |||||||||||||||||||| Sbjct: 2421762 agatcgcgctcgtcgacgcg 2421743
>emb|CR931740.2| Medicago truncatula chromosome 5 clone mth2-67g10, COMPLETE SEQUENCE Length = 153273 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Minus Query: 238 caagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagaccatcct 294 ||||||||| || ||||| || ||||||||||| ||||| || || || |||||||| Sbjct: 25411 caagatctcagttatcggcgcaggcaacgtgggaatggctatagctcaaaccatcct 25355
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 125 ctgtcggagctgggcttcgacgccg 149 ||||||| ||||||||||||||||| Sbjct: 3914156 ctgtcggggctgggcttcgacgccg 3914132
>gb|AF005404.2|AF005404 Pseudomonas aeruginosa pyocyanine biosynthesis operon, complete sequence Length = 6720 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 tccgcggcgaggcgctcgacctgca 372 ||||||||||||||||||| ||||| Sbjct: 3400 tccgcggcgaggcgctcgaactgca 3424
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 ccaccccgacctcctccgccg 218 ||||||||||||||||||||| Sbjct: 17618608 ccaccccgacctcctccgccg 17618588
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 368 ctgcagcacgccgccgccttcctcc 392 |||||||||||||||||| |||||| Sbjct: 4383653 ctgcagcacgccgccgccgtcctcc 4383629
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 376 cgccgccgccttcctcccgcgcgtc 400 |||||||||||||||||| |||||| Sbjct: 17999835 cgccgccgccttcctcccccgcgtc 17999859 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 ccggcaccgacgccgccgtc 430 |||||||||||||||||||| Sbjct: 14463495 ccggcaccgacgccgccgtc 14463476
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 166 cttcttccggccggtggccgacggc 190 |||||||||||||| |||||||||| Sbjct: 5505402 cttcttccggccggaggccgacggc 5505426 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 120 cgtcgctgtcggagctgggcttcgacgc 147 |||||||||||| ||| ||||||||||| Sbjct: 7748789 cgtcgctgtcggtgctcggcttcgacgc 7748762 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 ctggccgacgagatcgcgctcgtc 328 ||||||||||||||||||| |||| Sbjct: 1295280 ctggccgacgagatcgcgcacgtc 1295303
>gb|AE004838.1| Pseudomonas aeruginosa PAO1, section 399 of 529 of the complete genome Length = 10809 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 tccgcggcgaggcgctcgacctgca 372 ||||||||||||||||||| ||||| Sbjct: 3349 tccgcggcgaggcgctcgaactgca 3373
>gb|AE004616.1| Pseudomonas aeruginosa PAO1, section 177 of 529 of the complete genome Length = 11519 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 tccgcggcgaggcgctcgacctgca 372 ||||||||||||||||||| ||||| Sbjct: 4583 tccgcggcgaggcgctcgaactgca 4607
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 304 cctggccgacgagatcgcgctcgtcgacgcgct 336 |||||||| |||||||||||||| || |||||| Sbjct: 4311163 cctggccggcgagatcgcgctcgccgccgcgct 4311195 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 333 cgctccccgacaagctccgcggcga 357 |||||| |||||||||||||||||| Sbjct: 2279344 cgctcctcgacaagctccgcggcga 2279368
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 353 ggcgaggcgctcgacctgcagcacgccgccgcc 385 |||||||||||||||||| |||||||||||| Sbjct: 449759 ggcgaggcgctcgacctggcccacgccgccgcc 449727
>dbj|AP005573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1509_C06 Length = 113436 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 376 cgccgccgccttcctcccgcgcgtc 400 |||||||||||||||||| |||||| Sbjct: 51489 cgccgccgccttcctcccccgcgtc 51513
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 acgccgccgccttcctcccgc 395 ||||||||||||||||||||| Sbjct: 43115 acgccgccgccttcctcccgc 43135
>dbj|AP004090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1399_H05 Length = 147670 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 acgccgccgccttcctcccgc 395 ||||||||||||||||||||| Sbjct: 121879 acgccgccgccttcctcccgc 121899
>dbj|AK106679.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-B01, full insert sequence Length = 2106 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 acgccgccgccttcctcccgc 395 ||||||||||||||||||||| Sbjct: 1050 acgccgccgccttcctcccgc 1070
>dbj|AK067061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091D19, full insert sequence Length = 3265 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 ccaccccgacctcctccgccg 218 ||||||||||||||||||||| Sbjct: 124 ccaccccgacctcctccgccg 144
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 316 gatcgcgctcgtcgacgcgct 336 ||||||||||||||||||||| Sbjct: 851933 gatcgcgctcgtcgacgcgct 851913
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 368 ctgcagcacgccgccgccttcctcc 392 |||||||||||||||||| |||||| Sbjct: 4392347 ctgcagcacgccgccgccgtcctcc 4392323
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 ccaccccgacctcctccgccg 218 ||||||||||||||||||||| Sbjct: 17572979 ccaccccgacctcctccgccg 17572959
>emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa0005P03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162200 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 ccaccccgacctcctccgccg 218 ||||||||||||||||||||| Sbjct: 110944 ccaccccgacctcctccgccg 110924
>ref|NM_194785.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNAa0087H07.9), mRNA Length = 1437 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 cgccgccgtcaccaagaact 440 |||||||||||||||||||| Sbjct: 159 cgccgccgtcaccaagaact 178
>gb|AY019854.1| Oryza sativa microsatellite MRG2179 containing (CT)X12, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 tcccattccacccccttccc 94 |||||||||||||||||||| Sbjct: 53 tcccattccacccccttccc 72
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 ggcgctcgacctgcagcacg 377 |||||||||||||||||||| Sbjct: 488951 ggcgctcgacctgcagcacg 488970
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 gaacctggccgacgagatcg 320 |||||||||||||||||||| Sbjct: 2488505 gaacctggccgacgagatcg 2488486
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 tcgcgctcgtcgacgcgctc 337 |||||||||||||||||||| Sbjct: 1126976 tcgcgctcgtcgacgcgctc 1126957
>gb|BT013913.1| Lycopersicon esculentum clone 132910F, mRNA sequence Length = 1396 Score = 40.1 bits (20), Expect = 6.5 Identities = 83/104 (79%) Strand = Plus / Plus Query: 230 cgcctcaccaagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagacc 289 |||| |||||| |||||||||||||| | ||| ||||| || ||||| || || || || Sbjct: 185 cgccacaccaaaatctccgtcatcggcgtcggaaacgtcggtatggcaattgcacaaaca 244 Query: 290 atcctcacccagaacctggccgacgagatcgcgctcgtcgacgc 333 ||||| || || |||| | ||||||| | || ||||||||||| Sbjct: 245 atcctaacacaagacctagtcgacgagcttgcactcgtcgacgc 288
>gb|AC144453.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0050A24, complete sequence Length = 142574 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 403 catcgcctccggcaccgacgccgccgtcacca 434 ||||||| ||| ||||| |||||||||||||| Sbjct: 27073 catcgccgccgccaccgccgccgccgtcacca 27042
>gb|AC136523.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0018C06, complete sequence Length = 179695 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 403 catcgcctccggcaccgacgccgccgtcacca 434 ||||||| ||| ||||| |||||||||||||| Sbjct: 156197 catcgccgccgccaccgccgccgccgtcacca 156166
>gb|AY331258.1| Sphingomonas paucimobilis ORFA (orfA), ORFB (orfB), ORFC (orfC), ORFD (orfD), ORFE (orfE), ORFF (orfF), ORFG (orfG), ORFH (orfH), LinX1 (linX1), LinX2 (linX2), and LinA (linA) genes, complete cds; insertion sequence IS6100A, complete sequence; ORFJ' (orfJ') and ORFK (orfK) genes, complete cds; insertion sequence IS6100B, complete sequence; LinC (linC) gene, complete cds; insertion sequence IS6100C, complete sequence; and 'ORFN ('orfN), ORFO (orfO), ORFP (orfP), ORFQ (orfQ), ORFR (orfR), ORFS (orfS), ORFT (orfT), ORFU (orfU), ORFV (orfV), ORFW (orfW), ORFX (orfX), and ORFY (orfY) genes, complete cds Length = 41034 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 catcgcctccggcaccgacg 422 |||||||||||||||||||| Sbjct: 16770 catcgcctccggcaccgacg 16789
>ref|XM_381543.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01367.1) partial mRNA Length = 3534 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ccattccccacgaagaacaa 20 |||||||||||||||||||| Sbjct: 986 ccattccccacgaagaacaa 1005
>gb|AC123883.10| Mus musculus chromosome 3, clone RP23-461P7, complete sequence Length = 199554 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 cgccgccgccttcctcccgc 395 |||||||||||||||||||| Sbjct: 103605 cgccgccgccttcctcccgc 103624
>gb|AF471351.1| Homo sapiens clone 52-1m Ig heavy chain variable region, VH3 family mRNA, partial cds Length = 345 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 71 agcgtcccattccacccccttccc 94 |||| ||||||||||||||||||| Sbjct: 147 agcgacccattccacccccttccc 124
>emb|X64420.1|SCHISD S.coelicolor hisD gene for L-histidinol:NAD+ oxidoreductase Length = 2357 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 352 cggcgaggcgctcgacctgcagcacgcc 379 |||||| |||||||||||| |||||||| Sbjct: 455 cggcgacgcgctcgacctggagcacgcc 428
>emb|AL359762.24| Human DNA sequence from clone RP11-118B23 on chromosome 1 Contains the 3' end of the gene for RNA processing factor 1 (RPF1), the GNG5 gene for guanine nucleotide binding protein (G protein), gamma 5, the SPATA1 gene for spermatogenesis associated 1, the CTBS gene for chitobiase, di-N-acetyl- and a CpG island, complete sequence Length = 125565 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 cgccgccgccttcctcccgc 395 |||||||||||||||||||| Sbjct: 16213 cgccgccgccttcctcccgc 16232
>emb|BX039974.1|CNS0930A Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC10CB04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 689 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ttccacccccttcccaccctgtcg 103 |||| ||||||||||||||||||| Sbjct: 371 ttcctcccccttcccaccctgtcg 394
>emb|Y10602.1|LELDH1GN Lycopersicon esculentum ldh1 gene Length = 3108 Score = 40.1 bits (20), Expect = 6.5 Identities = 83/104 (79%) Strand = Plus / Plus Query: 230 cgcctcaccaagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagacc 289 |||| |||||| |||||||||||||| | ||| ||||| || ||||| || || || || Sbjct: 1075 cgccacaccaaaatctccgtcatcggcgtcggaaacgtcggtatggcaattgcacaaaca 1134 Query: 290 atcctcacccagaacctggccgacgagatcgcgctcgtcgacgc 333 ||||| || || |||| | ||||||| | || ||||||||||| Sbjct: 1135 atcctaacacaagacctagtcgacgagcttgcactcgtcgacgc 1178
>emb|Y08887.1|LELDH1 Lycopersicon esculentum mRNA for L-lactate dehydrogenase, clone LDH1 Length = 1432 Score = 40.1 bits (20), Expect = 6.5 Identities = 83/104 (79%) Strand = Plus / Plus Query: 230 cgcctcaccaagatctccgtcatcggggccggcaacgtgggcatggccatcgcgcagacc 289 |||| |||||| |||||||||||||| | ||| ||||| || ||||| || || || || Sbjct: 230 cgccacaccaaaatctccgtcatcggcgtcggaaacgtcggtatggcaattgcacaaaca 289 Query: 290 atcctcacccagaacctggccgacgagatcgcgctcgtcgacgc 333 ||||| || || |||| | ||||||| | || ||||||||||| Sbjct: 290 atcctaacacaagacctagtcgacgagcttgcactcgtcgacgc 333
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 343 caagctccgcggcgaggcgctcga 366 ||||||||||||||| |||||||| Sbjct: 227354 caagctccgcggcgacgcgctcga 227377
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 318 tcgcgctcgtcgacgcgctc 337 |||||||||||||||||||| Sbjct: 2442882 tcgcgctcgtcgacgcgctc 2442863
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 352 cggcgaggcgctcgacctgcagcacgcc 379 |||||| |||||||||||| |||||||| Sbjct: 101602 cggcgacgcgctcgacctggagcacgcc 101629
>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29 Length = 298450 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 410 tccggcaccgacgccgccgtcacc 433 ||||||||||||||| |||||||| Sbjct: 28125 tccggcaccgacgccaccgtcacc 28102
>gb|AF416331.1| Ruegeria sp. PR1b plasmid pSD25, complete sequence Length = 148650 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 gccgtcccgcaccgccgcct 234 |||||||||||||||||||| Sbjct: 10887 gccgtcccgcaccgccgcct 10868
>gb|AE011805.1| Xanthomonas axonopodis pv. citri str. 306, section 183 of 469 of the complete genome Length = 10303 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 285 agaccatcctcacccagaacctgg 308 |||||||||||||| ||||||||| Sbjct: 3278 agaccatcctcaccgagaacctgg 3301
>gb|AE012463.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 371 of 460 of the complete genome Length = 10629 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 414 gcaccgacgccgccgtcacc 433 |||||||||||||||||||| Sbjct: 7917 gcaccgacgccgccgtcacc 7936
>gb|DQ399710.1| Sphingomonas sp. BHC-A maleylacetate reductase (linF2) gene, complete cds Length = 1059 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 catcgcctccggcaccgacg 422 |||||||||||||||||||| Sbjct: 822 catcgcctccggcaccgacg 803
>dbj|AB177985.1| Sphingobium japonicum genes for putative glutathione S transferase, hypothetical protein, maleylacetate reductase, putative LysR-type transcriptional regulator, 2,6-Dichloro-p-hydroquinone 1,2-dioxygenase, putative Na+ H+ antiporter, putative arylsulfatase precursor, putative glutathione transferase, complete and partial cds Length = 9888 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 403 catcgcctccggcaccgacg 422 |||||||||||||||||||| Sbjct: 3090 catcgcctccggcaccgacg 3109
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 cgcggcgaggcgctcgacct 369 |||||||||||||||||||| Sbjct: 84639 cgcggcgaggcgctcgacct 84658
>dbj|AK144424.1| Mus musculus 16 days neonate male medulla oblongata cDNA, RIKEN full-length enriched library, clone:G630066H01 product:unclassifiable, full insert sequence Length = 2163 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ccaccccgacctcctccgcc 217 |||||||||||||||||||| Sbjct: 1084 ccaccccgacctcctccgcc 1103
>gb|AC090873.4| Oryza sativa chromosome 10 clone OSJNBa0029P06, complete sequence Length = 151533 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 cgccgccgtcaccaagaact 440 |||||||||||||||||||| Sbjct: 22127 cgccgccgtcaccaagaact 22146
>gb|AC099733.2| Oryza sativa chromosome 10 clone OSJNAa0087H07, complete sequence Length = 132268 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 cgccgccgtcaccaagaact 440 |||||||||||||||||||| Sbjct: 94395 cgccgccgtcaccaagaact 94414
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 gcaccgacgccgccgtcacc 433 |||||||||||||||||||| Sbjct: 864867 gcaccgacgccgccgtcacc 864848
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 376 cgccgccgccttcctcccgcgcgtccgc 403 |||||||||| |||||||||||| |||| Sbjct: 82723 cgccgccgccgtcctcccgcgcgcccgc 82696
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 tcgcgctcgtcgacgcgctc 337 |||||||||||||||||||| Sbjct: 291459 tcgcgctcgtcgacgcgctc 291478
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 cgccgccgtcaccaagaact 440 |||||||||||||||||||| Sbjct: 2365395 cgccgccgtcaccaagaact 2365414
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 gcgtcgtcgctgtcggagct 135 |||||||||||||||||||| Sbjct: 14187936 gcgtcgtcgctgtcggagct 14187955
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 403 catcgcctccggcaccgacgccgccgtcacca 434 ||||||| ||| ||||| |||||||||||||| Sbjct: 12073383 catcgccgccgccaccgccgccgccgtcacca 12073352
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cccattccacccccttccca 95 |||||||||||||||||||| Sbjct: 10289891 cccattccacccccttccca 10289910
>gb|AE004915.1| Pseudomonas aeruginosa PAO1, section 476 of 529 of the complete genome Length = 9980 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 298 ccagaacctggccgacgagatcgc 321 ||||| |||||||||||||||||| Sbjct: 2988 ccagagcctggccgacgagatcgc 3011
>dbj|AP003020.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0498A12 Length = 159749 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cccattccacccccttccca 95 |||||||||||||||||||| Sbjct: 155205 cccattccacccccttccca 155224
>dbj|AP005493.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0078D03 Length = 176593 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 gcgtcgtcgctgtcggagct 135 |||||||||||||||||||| Sbjct: 92225 gcgtcgtcgctgtcggagct 92244
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 gcgctcgtcgacgcgctccc 339 |||||||||||||||||||| Sbjct: 1622990 gcgctcgtcgacgcgctccc 1623009
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 ctccggcaccgacgccgccg 428 |||||||||||||||||||| Sbjct: 3478169 ctccggcaccgacgccgccg 3478188
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 ccggcaccgacgccgccgtcacca 434 ||||||||| |||||||||||||| Sbjct: 4288603 ccggcaccgtcgccgccgtcacca 4288626
>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0468G03 Length = 143918 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 tcccattccacccccttccc 94 |||||||||||||||||||| Sbjct: 32446 tcccattccacccccttccc 32465
>dbj|AP005052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0654B04 Length = 156907 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 ccgccgccttcctcccgcgcgtcc 401 |||||||||||||||| ||||||| Sbjct: 60112 ccgccgccttcctcccccgcgtcc 60089
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 411 ccggcaccgacgccgccgtc 430 |||||||||||||||||||| Sbjct: 63060 ccggcaccgacgccgccgtc 63041
>dbj|AP004637.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0703C03 Length = 162620 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 gcgtcgtcgctgtcggagct 135 |||||||||||||||||||| Sbjct: 3492 gcgtcgtcgctgtcggagct 3511
>dbj|AK108337.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-A07, full insert sequence Length = 790 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 gcgtcgtcgctgtcggagct 135 |||||||||||||||||||| Sbjct: 291 gcgtcgtcgctgtcggagct 272
>dbj|AK107242.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-F06, full insert sequence Length = 1636 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 cgccgccgtcaccaagaact 440 |||||||||||||||||||| Sbjct: 242 cgccgccgtcaccaagaact 261
>dbj|AK102137.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033085I06, full insert sequence Length = 1965 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 tcccattccacccccttccc 94 |||||||||||||||||||| Sbjct: 129 tcccattccacccccttccc 148
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 ctcgtcgacgcgctccccga 342 |||||||||||||||||||| Sbjct: 616726 ctcgtcgacgcgctccccga 616707
>emb|CR942559.2| Xenopus tropicalis finished cDNA, clone TGas003c15 Length = 2182 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 ccgacgccgccgtcaccaag 436 |||||||||||||||||||| Sbjct: 2063 ccgacgccgccgtcaccaag 2082
>gb|DQ065771.1| Polyangium cellulosum hypothetical protein gene, complete cds; chivosazol biosynthetic gene cluster, complete sequence; and hypothetical protein gene, complete cds Length = 96547 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 gctccgcggcgaggcgctcgacct 369 |||||||||||| ||||||||||| Sbjct: 7421 gctccgcggcgatgcgctcgacct 7398
>dbj|AP001791.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-427G12, complete sequence Length = 140000 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cccattccacccccttccca 95 |||||||||||||||||||| Sbjct: 96018 cccattccacccccttccca 96037
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 318 tcgcgctcgtcgacgcgctc 337 |||||||||||||||||||| Sbjct: 697311 tcgcgctcgtcgacgcgctc 697330
>emb|AL833804.16| Mouse DNA sequence from clone RP23-20A6 on chromosome 2, complete sequence Length = 200521 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 ccaccccgacctcctccgcc 217 |||||||||||||||||||| Sbjct: 89317 ccaccccgacctcctccgcc 89336
>gb|AF085708.1|HSGNG1 Homo sapiens guanine nucleotide binding protein gamma 5 (GNG5) gene, exons 1 and 2 Length = 883 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 cgccgccgccttcctcccgc 395 |||||||||||||||||||| Sbjct: 861 cgccgccgccttcctcccgc 842
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 195 cggccaccccgacctcctccgccg 218 |||||||| ||||||||||||||| Sbjct: 3396165 cggccaccacgacctcctccgccg 3396142
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 cgccgccgtcaccaagaact 440 |||||||||||||||||||| Sbjct: 2365346 cgccgccgtcaccaagaact 2365365
>emb|X97257.1|PRVULGNS Suid herpesvirus 1 strain Kaplan UL[5,6,7,8,8.5,9,10,11,12,13] genes Length = 11059 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 376 cgccgccgccttcctcccgcgcgtccgc 403 |||||||||| |||||||||||| |||| Sbjct: 4373 cgccgccgccgtcctcccgcgcgcccgc 4346
>dbj|AB070934.1| Streptomyces avermitilis carotenoid biosynthetic gene cluster Length = 14304 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 ctggccgacgagatcgcgctcgtc 328 ||||||||||||||||||| |||| Sbjct: 11215 ctggccgacgagatcgcgcacgtc 11238
>dbj|AB057771.1| Oryza sativa (japonica cultivar-group) PPOX-I/Protox-I gene for protoporphyrinogen oxidase I, complete cds Length = 5441 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cccattccacccccttccca 95 |||||||||||||||||||| Sbjct: 801 cccattccacccccttccca 820 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,160,886 Number of Sequences: 3902068 Number of extensions: 3160886 Number of successful extensions: 89505 Number of sequences better than 10.0: 128 Number of HSP's better than 10.0 without gapping: 132 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 82265 Number of HSP's gapped (non-prelim): 7236 length of query: 478 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 456 effective length of database: 17,147,199,772 effective search space: 7819123096032 effective search space used: 7819123096032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
