ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet112a03 |
|---|---|
| Clone Library Name | barley_pub |
>HTH_ARATH (Q9S746) Protein HOTHEAD precursor (Protein ADHESION OF CALYX| EDGES) Length = 594 Score = 164 bits (415), Expect = 1e-40 Identities = 84/167 (50%), Positives = 110/167 (65%), Gaps = 1/167 (0%) Frame = +2 Query: 2 MSAEIGQLSTVPPKQRSLELAREY-AHNKLSLPKEVFQGGFILEKIDGPLSTGHLVLADT 178 MS + ST+P KQR E + Y NK L E F G FILEK+ P+S GHL L +T Sbjct: 384 MSNKNELFSTIPAKQRRPEATQAYITRNKYQL-HEAFNGSFILEKLAYPISRGHLSLVNT 442 Query: 179 DVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKILKTNSFAHLTPDGAGYEMERVLNMSVQA 358 +V +NP+VTFNYF HP DL RCV I+ + K++ +N F + T + ++L++SV+A Sbjct: 443 NVDDNPSVTFNYFKHPVDLQRCVEAIRLVSKVVTSNRFLNYTQCDK-QNVHKMLSLSVKA 501 Query: 359 NVNLIPKHTNTTESLEQFCKDTXITIWHYHGGCHVGKVVDQQHRVLG 499 N+NL PK N T+S+ QFCKDT +TIWHYHGGC VGKVV +VLG Sbjct: 502 NINLRPKQLNDTKSMAQFCKDTVVTIWHYHGGCLVGKVVSPNRKVLG 548
>MDL1_PRUSE (P52706) (R)-mandelonitrile lyase 1 precursor (EC 4.1.2.10)| (Hydroxynitrile lyase 1) ((R)-oxynitrilase 1) Length = 563 Score = 92.8 bits (229), Expect = 5e-19 Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 2/138 (1%) Frame = +2 Query: 92 LPKEVFQGGFILEKIDGPLSTGHLVL-ADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIE 268 LP F K+ GPLS G L L + ++V+ +P V FNY+S+P DLS CV G+K I Sbjct: 377 LPNSTF--AHFASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNPTDLSHCVSGMKKIG 434 Query: 269 KILKTNSFA-HLTPDGAGYEMERVLNMSVQANVNLIPKHTNTTESLEQFCKDTXITIWHY 445 ++L T++ + D G E +L + +PK + E FC+++ + WHY Sbjct: 435 ELLSTDALKPYKVEDLPGIEGFNILGIP-------LPKDQTDDAAFETFCRESVASYWHY 487 Query: 446 HGGCHVGKVVDQQHRVLG 499 HGGC VGKV+D RV G Sbjct: 488 HGGCLVGKVLDGDFRVTG 505
>MDL3_PRUSE (P52707) (R)-mandelonitrile lyase 3 precursor (EC 4.1.2.10)| (Hydroxynitrile lyase 3) ((R)-oxynitrilase 3) Length = 573 Score = 90.1 bits (222), Expect = 3e-18 Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 2/138 (1%) Frame = +2 Query: 92 LPKEVFQGGFILEKIDGPLSTGHLVL-ADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIE 268 LP + F I+ K+ GPLS G + L + +DV+ P V FNY+S+ DLS CV G+K + Sbjct: 378 LPNQTF--AHIVNKVPGPLSHGTVTLNSSSDVRVGPNVKFNYYSNLTDLSHCVSGMKKLG 435 Query: 269 KILKTNSFA-HLTPDGAGYEMERVLNMSVQANVNLIPKHTNTTESLEQFCKDTXITIWHY 445 ++L T++ + D G + +L + +P++ + E FC+++ + WHY Sbjct: 436 EVLSTDALEPYKVEDLPGIDGFNILGIP-------LPENQTDDAAFETFCRESVASYWHY 488 Query: 446 HGGCHVGKVVDQQHRVLG 499 HGGC VGKV+D RV G Sbjct: 489 HGGCLVGKVLDDGFRVTG 506
>MDL2_PRUSE (O50048) (R)-mandelonitrile lyase 2 precursor (EC 4.1.2.10)| (Hydroxynitrile lyase 2) ((R)-oxynitrilase 2) Length = 576 Score = 88.6 bits (218), Expect = 9e-18 Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 2/138 (1%) Frame = +2 Query: 92 LPKEVFQGGFILEKIDGPLSTGHLVLADT-DVKNNPAVTFNYFSHPQDLSRCVYGIKTIE 268 LP F I+ K+ GPLS G ++L T DV+ P VTFNY+S+ DL+ CV G+K I Sbjct: 379 LPNTTF--AHIVNKVPGPLSHGTVLLQSTSDVRVAPNVTFNYYSNTTDLAHCVSGMKKIG 436 Query: 269 KILKTNSFA-HLTPDGAGYEMERVLNMSVQANVNLIPKHTNTTESLEQFCKDTXITIWHY 445 + L +++ + D G E +L + +P++ + E FC++ + WHY Sbjct: 437 EFLSSDALKPYKVEDLPGIEGFDILGIP-------LPENQTDDAAFETFCREAVASYWHY 489 Query: 446 HGGCHVGKVVDQQHRVLG 499 HGGC VG+V+D RV G Sbjct: 490 HGGCLVGEVLDDDFRVTG 507
>MDL4_PRUSE (O82784) (R)-mandelonitrile lyase 4 precursor (EC 4.1.2.10)| (Hydroxynitrile lyase 4) ((R)-oxynitrilase 4) Length = 574 Score = 87.4 bits (215), Expect = 2e-17 Identities = 52/138 (37%), Positives = 73/138 (52%), Gaps = 2/138 (1%) Frame = +2 Query: 92 LPKEVFQGGFILEKIDGPLSTGHLVL-ADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIE 268 LP + F I+ K+ GPLS G L L + ++V P V FNY S P DL+ CV G+K I Sbjct: 379 LPNQTF--AHIVSKVPGPLSAGSLTLQSSSNVSVAPNVKFNYCSDPVDLTHCVSGMKKIG 436 Query: 269 KILKTNSFA-HLTPDGAGYEMERVLNMSVQANVNLIPKHTNTTESLEQFCKDTXITIWHY 445 L T++ + D G + +L +P++ + E+FC+DT + WHY Sbjct: 437 VFLSTDALKPYKVDDLPGIDGFNILGTP-------LPENQTDDAAFEKFCRDTVASYWHY 489 Query: 446 HGGCHVGKVVDQQHRVLG 499 HGG VGKV+D RV G Sbjct: 490 HGGAIVGKVIDGNFRVTG 507
>MDL1_PRUDU (O24243) (R)-mandelonitrile lyase 1 precursor (EC 4.1.2.10)| (Hydroxynitrile lyase 1) ((R)-oxynitrilase 1) Length = 559 Score = 84.0 bits (206), Expect = 2e-16 Identities = 50/138 (36%), Positives = 76/138 (55%), Gaps = 2/138 (1%) Frame = +2 Query: 92 LPKEVFQGGFILEKIDGPLSTGHLVL-ADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIE 268 LP F I+ ++ GPLS G + L + +DV+ P + FNY+S+ DL+ CV G+K + Sbjct: 378 LPNSTF--AHIVSQVPGPLSHGSVTLNSSSDVRIAPNIKFNYYSNSTDLANCVSGMKKLG 435 Query: 269 KILKTNSFAHLTPDGAGYEMERVLNMSVQANVNL-IPKHTNTTESLEQFCKDTXITIWHY 445 +L+T + L P Y+ VL + + + +P++ S E FC D + WHY Sbjct: 436 DLLRTKA---LEP----YKARDVLGIDGFNYLGVPLPENQTDDASFETFCLDNVASYWHY 488 Query: 446 HGGCHVGKVVDQQHRVLG 499 HGG VGKV+D RV+G Sbjct: 489 HGGSLVGKVLDDSFRVMG 506
>BETA_AGRT5 (Q8UH55) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 549 Score = 43.9 bits (102), Expect = 2e-04 Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 6/123 (4%) Frame = +2 Query: 149 STGHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKILKTNSFAHLTPDGAGYEM 328 S G++ L D ++P + FNY SHP+D + + ++ +I +F D G E+ Sbjct: 385 SRGNVTLRSADPHDDPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAF----DDFRGPEI 440 Query: 329 ERVLNMSVQANVNLIPKHTNTTESLEQFCKDTXITIWHYHGGCHVG------KVVDQQHR 490 + N+ T E ++ F ++ + +H G C +G VVD + R Sbjct: 441 QPGENI-------------ETDEQIDAFLREHLESAYHPCGTCRMGDRNDPMAVVDPECR 487 Query: 491 VLG 499 V+G Sbjct: 488 VIG 490
>BETA_RHILO (Q985M5) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 550 Score = 43.5 bits (101), Expect = 3e-04 Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 9/129 (6%) Frame = +2 Query: 140 GPL---STGHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKILKTNSFAHLTPD 310 GP+ S G + L D K P + FNY SHP D + + I+ +I ++F Sbjct: 380 GPMRSKSRGSVTLRSPDPKAKPVIRFNYMSHPDDWTEFRHCIRLTREIFGQSAFDAF--- 436 Query: 311 GAGYEMERVLNMSVQANVNLIPKHTNTTESLEQFCKDTXITIWHYHGGCHVGK------V 472 G E+ H + + L+ F +D + +H G C +G+ V Sbjct: 437 -RGQEISP-------------GSHVQSDDDLDVFIRDHAESAYHPCGTCKMGRADDVTSV 482 Query: 473 VDQQHRVLG 499 VD + RV+G Sbjct: 483 VDPECRVIG 491
>NINAG_DROME (Q9VGP2) Neither inactivation nor afterpotential protein G| precursor (EC 1.-.-.-) Length = 581 Score = 43.1 bits (100), Expect = 4e-04 Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 6/138 (4%) Frame = +2 Query: 110 QGGFILEKIDGPLSTGHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKILKTNS 289 +G ++ P S G + L + ++ NP + NY S +D++ + I++ +++ + + Sbjct: 408 EGFVVISSCLQPKSRGSVGLLNRHMRRNPLIDPNYLSSEEDVACTISAIRSAVELVNSTA 467 Query: 290 FAHLTPDGAGYEMERVLNMSVQANVNLIP------KHTNTTESLEQFCKDTXITIWHYHG 451 FA L P R+ VQ N P + + + LE + + H G Sbjct: 468 FAALHP--------RIHWPRVQECSNFGPFERDFFDNRPSDQYLECLMRHVGLGSHHPGG 519 Query: 452 GCHVGKVVDQQHRVLGAS 505 C +G VVD Q R+ G S Sbjct: 520 TCALGSVVDSQLRLKGVS 537
>BETA_RHIME (P54223) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 549 Score = 40.8 bits (94), Expect = 0.002 Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 6/123 (4%) Frame = +2 Query: 149 STGHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKILKTNSFAHLTPDGAGYEM 328 S G++ L +D K +P + FNY SHP+D + + ++ +I +F Sbjct: 385 SRGNVSLRSSDPKADPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAF------------ 432 Query: 329 ERVLNMSVQANVNLIPKHTNTTESLEQFCKDTXITIWHYHGGCHVG------KVVDQQHR 490 + +Q + T E ++ F ++ + +H G C +G VVD + R Sbjct: 433 DLYRGPEIQPG-----EKVQTDEEIDGFLREHLESAYHPCGTCKMGAKDDPMAVVDPETR 487 Query: 491 VLG 499 V+G Sbjct: 488 VIG 490
>BETA_ECOLI (P17444) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 556 Score = 40.4 bits (93), Expect = 0.003 Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 4/121 (3%) Frame = +2 Query: 149 STGHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKILKTNSFAHLTPDGAGYEM 328 S GH+ + D +PA+ FNY SH QD I+ +I+ + + Sbjct: 393 SRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPA------------L 440 Query: 329 ERVLNMSVQANVNLIPKHTNTTESLEQFCKDTXITIWHYHGGCHVG----KVVDQQHRVL 496 ++ + V T E L++F ++ T +H G C +G VVD + RV Sbjct: 441 DQYRGREISPGV-----ECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMSVVDGEGRVH 495 Query: 497 G 499 G Sbjct: 496 G 496
>BETA_ECO57 (Q8X6C6) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 562 Score = 38.9 bits (89), Expect = 0.008 Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 4/121 (3%) Frame = +2 Query: 149 STGHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKILKTNSFAHLTPDGAGYEM 328 S GH+ + D +PA+ FNY SH QD I+ +I+ + + Sbjct: 393 SRGHVRIKSRDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMHQPA------------L 440 Query: 329 ERVLNMSVQANVNLIPKHTNTTESLEQFCKDTXITIWHYHGGCHVG----KVVDQQHRVL 496 ++ + T E L++F ++ T +H G C +G VVD + RV Sbjct: 441 DQYRGREISPGT-----ECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMSVVDGEGRVH 495 Query: 497 G 499 G Sbjct: 496 G 496
>BETA_ECOL6 (Q8FKI9) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 556 Score = 38.5 bits (88), Expect = 0.010 Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 4/121 (3%) Frame = +2 Query: 149 STGHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKILKTNSFAHLTPDGAGYEM 328 S GH+ + D +P + FNY SH QD I+ +I+ + + Sbjct: 393 SRGHVRIKSRDPHQHPGILFNYMSHEQDWQEFRDAIRITREIMHQPA------------L 440 Query: 329 ERVLNMSVQANVNLIPKHTNTTESLEQFCKDTXITIWHYHGGCHVG----KVVDQQHRVL 496 ++ + V T E L++F ++ T +H G C +G VVD + RV Sbjct: 441 DQYRGREISPGV-----ECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMAVVDGEGRVH 495 Query: 497 G 499 G Sbjct: 496 G 496
>BETA_PSEAE (Q9HTJ2) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 561 Score = 38.1 bits (87), Expect = 0.014 Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 4/121 (3%) Frame = +2 Query: 149 STGHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKILKTNSFAHLTPDGAGYEM 328 S G + L D + +P++ FNY SH QD GI+ +I+ + L P G E+ Sbjct: 395 SRGRIHLKSRDPRQHPSILFNYMSHEQDWQEFRDGIRLTREIMNQPA---LDP-YRGREL 450 Query: 329 ERVLNMSVQANVNLIPKHTNTTESLEQFCKDTXITIWHYHGGCHVGK----VVDQQHRVL 496 +SVQ++ L++F ++ T +H C +G VVD Q RV Sbjct: 451 SP--GVSVQSDA-----------ELDEFIRNHAETAFHPSCSCKMGSDDMAVVDGQGRVH 497 Query: 497 G 499 G Sbjct: 498 G 498
>ALKJ_PSEPU (Q9WWW2) Alcohol dehydrogenase [acceptor] (EC 1.1.99.-)| Length = 552 Score = 34.7 bits (78), Expect = 0.15 Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 4/123 (3%) Frame = +2 Query: 143 PLSTGHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKILKTNSFAHLTPDGAGY 322 P S G + L + ++P + NY S P+D+ + GIK I S A + Sbjct: 387 PKSRGRIGLKSANPMDDPLIDPNYLSDPEDIKTMIAGIKIGRAIFDAPSMA------KHF 440 Query: 323 EMERVLNMSVQANVNLIPKHTNTTESLEQFCKDTXITIWHYHGGCHVGK----VVDQQHR 490 + E V +V ++ ++ + E TI+H G C +GK VVD + Sbjct: 441 KREIVPGPAVTSDDEIVADIRSRAE-----------TIYHPVGTCRMGKDPASVVDPCLQ 489 Query: 491 VLG 499 V G Sbjct: 490 VRG 492
>BETA_BRUSU (Q8G1Z8) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 549 Score = 34.7 bits (78), Expect = 0.15 Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 9/129 (6%) Frame = +2 Query: 140 GPL---STGHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKILKTNSFAHLTPD 310 GP+ S G + L + + P + FNY SH D + + ++ +I +F Sbjct: 379 GPMRSKSRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAF------ 432 Query: 311 GAGYEMERVLNMSVQANVNLIPKHTNTTESLEQFCKDTXITIWHYHGGCHVG------KV 472 + +Q H T + ++ F ++ + +H G C +G V Sbjct: 433 ------DPYRGAEIQPGA-----HVQTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAV 481 Query: 473 VDQQHRVLG 499 VD + RV+G Sbjct: 482 VDPECRVIG 490
>BETA_BRUME (Q8YFY2) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 549 Score = 34.7 bits (78), Expect = 0.15 Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 9/129 (6%) Frame = +2 Query: 140 GPL---STGHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKILKTNSFAHLTPD 310 GP+ S G + L + + P + FNY SH D + + ++ +I +F Sbjct: 379 GPMRSKSRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAF------ 432 Query: 311 GAGYEMERVLNMSVQANVNLIPKHTNTTESLEQFCKDTXITIWHYHGGCHVG------KV 472 + +Q H T + ++ F ++ + +H G C +G V Sbjct: 433 ------DPYRGAEIQPGA-----HVQTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAV 481 Query: 473 VDQQHRVLG 499 VD + RV+G Sbjct: 482 VDPECRVIG 490
>DHGL_DROME (P18173) Glucose dehydrogenase [acceptor] precursor (EC 1.1.99.10)| [Contains: Glucose dehydrogenase [acceptor] short protein] Length = 625 Score = 34.3 bits (77), Expect = 0.20 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = +2 Query: 122 ILEKIDGPLSTGHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKILKT 283 I + P S G + L D P + NY +H QD+ V GIK + ++ +T Sbjct: 449 IFPAVLNPRSRGFIGLRSADPLEPPRIVANYLTHEQDVKTLVEGIKFVIRLSQT 502
>BETA_PSESM (Q88AE7) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 568 Score = 33.5 bits (75), Expect = 0.33 Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 4/121 (3%) Frame = +2 Query: 149 STGHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKILKTNSFAHLTPDGAGYEM 328 S G + + D + P++ FNY + QD GI+ +I++ + + Sbjct: 397 SRGRVHVKSKDPREYPSILFNYMASDQDWQEFRDGIRLTREIMQQPA------------L 444 Query: 329 ERVLNMSVQANVNLIPKHTNTTESLEQFCKDTXITIWHYHGGCHVG----KVVDQQHRVL 496 + + +++ + E+L+QF ++ T +H C +G VVD Q RV Sbjct: 445 DPYRGREISPGIDV-----QSDEALDQFVREHAETAYHPSCSCKMGTDEMAVVDGQGRVH 499 Query: 497 G 499 G Sbjct: 500 G 500
>BETA_PSEPK (Q88CW6) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 565 Score = 33.5 bits (75), Expect = 0.33 Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 4/119 (3%) Frame = +2 Query: 155 GHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKILKTNSFAHLTPDGAGYEMER 334 G + + D + +P++ FNY S QD GI+ +I+ + + R Sbjct: 397 GRIQVKSKDPRQHPSILFNYMSTEQDWQEFRDGIRLTREIMAQPAL----------DPYR 446 Query: 335 VLNMSVQANVNLIPKHTNTTESLEQFCKDTXITIWHYHGGCHVG----KVVDQQHRVLG 499 +S A+V T E L++F ++ T +H C +G VVD + RV G Sbjct: 447 GREISPGADV-------QTDEQLDKFIREHAETAFHPSCSCKMGTDDMAVVDGEGRVHG 498
>ALKJ_PSEOL (Q00593) Alcohol dehydrogenase [acceptor] (EC 1.1.99.-)| Length = 558 Score = 32.3 bits (72), Expect = 0.74 Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 4/123 (3%) Frame = +2 Query: 143 PLSTGHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKILKTNSFAHLTPDGAGY 322 P S G + L + P + NY S +D+ + GIK IL+ S A + Sbjct: 387 PKSRGRIGLKSANPLQPPLIDPNYLSDHEDIKTMIAGIKIGRAILQAPSMA------KHF 440 Query: 323 EMERVLNMSVQANVNLIPKHTNTTESLEQFCKDTXITIWHYHGGCHVGK----VVDQQHR 490 + E V +V+ + +I E TI+H G C +GK VVD + Sbjct: 441 KHEVVPGQAVKTDDEIIEDIRRRAE-----------TIYHPVGTCRMGKDPASVVDPCLK 489 Query: 491 VLG 499 + G Sbjct: 490 IRG 492
>BETA_STAXY (Q9X2M2) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 560 Score = 32.3 bits (72), Expect = 0.74 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 3/50 (6%) Frame = +2 Query: 140 GPL---STGHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKILK 280 GP+ S GHL + D P FNY S +D V IK ILK Sbjct: 386 GPMYSNSRGHLKIKSKDPFEKPEFVFNYLSTEEDKREWVEAIKVARNILK 435
>MBI2_YEAST (P03873) Cytochrome b mRNA maturase bI2| Length = 423 Score = 31.2 bits (69), Expect = 1.7 Identities = 15/45 (33%), Positives = 23/45 (51%) Frame = +2 Query: 335 VLNMSVQANVNLIPKHTNTTESLEQFCKDTXITIWHYHGGCHVGK 469 + NMS + N+ +IPK SL+ + + IW GC +GK Sbjct: 312 IKNMSGKGNIKVIPK------SLDNYLTPLALAIWIMDDGCKLGK 350
>APT_SYMTH (Q67LM3) Adenine phosphoribosyltransferase (EC 2.4.2.7) (APRT)| Length = 170 Score = 31.2 bits (69), Expect = 1.7 Identities = 16/51 (31%), Positives = 28/51 (54%) Frame = +2 Query: 32 VPPKQRSLELAREYAHNKLSLPKEVFQGGFILEKIDGPLSTGHLVLADTDV 184 +P K RS+ EY ++L + ++ FQ G + +D L+TG + A D+ Sbjct: 83 LPWKTRSISYQLEYGEDRLEVHEDAFQPGQKVLVVDDLLATGGTIRATIDL 133
>PYRC_CLOAB (Q97LN7) Dihydroorotase (EC 3.5.2.3) (DHOase)| Length = 424 Score = 30.8 bits (68), Expect = 2.2 Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 7/121 (5%) Frame = +2 Query: 95 PKEVFQ----GGFILEKID--GPLSTGHLVLADTDVKNNPAVTFNYFSHPQDLSRCV-YG 253 PK V++ GG + EK++ G L VL D AV+ ++ Q +S + G Sbjct: 182 PKLVYESGINGGKVAEKLNMMGALEEAETVLTARDAAL--AVSSGAKTNIQHISSKISLG 239 Query: 254 IKTIEKILKTNSFAHLTPDGAGYEMERVLNMSVQANVNLIPKHTNTTESLEQFCKDTXIT 433 I + K + N A TP E +LN A VN + + +++ KD I Sbjct: 240 IIKLAKEMGANIIAEATPQHFSITEEEILNCGTNAKVNPPLRREDDRKAIVAALKDDTIQ 299 Query: 434 I 436 + Sbjct: 300 V 300
>CDAN1_HUMAN (Q8IWY9) Codanin-1| Length = 1226 Score = 30.4 bits (67), Expect = 2.8 Identities = 23/50 (46%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Frame = +2 Query: 35 PPKQRSLEL--AREYAHNKLSLPKEVFQGGFILEKIDGPLSTGHLVLADT 178 PP Q LE AR H LSL KE FQG L+ + P + G +LADT Sbjct: 1098 PPAQYRLERGQARRLLHMLLSLWKEDFQGPVPLQLLLSPRNVG--LLADT 1145
>DHGL_DROPS (P18172) Glucose dehydrogenase [acceptor] precursor (EC 1.1.99.10)| [Contains: Glucose dehydrogenase [acceptor] short protein] Length = 625 Score = 30.0 bits (66), Expect = 3.7 Identities = 15/55 (27%), Positives = 27/55 (49%) Frame = +2 Query: 122 ILEKIDGPLSTGHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKILKTN 286 I + P S G++ L D + P + NY + +D+ V GIK ++ +T+ Sbjct: 449 IFPAVLNPKSRGYITLRSADPLDPPRIFANYLTDERDVKTLVEGIKFAIRLSQTS 503
>DHE41_HALSA (P29051) NAD-specific glutamate dehydrogenase A (EC 1.4.1.2)| (NAD-GDH A) Length = 435 Score = 30.0 bits (66), Expect = 3.7 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 8/68 (11%) Frame = +2 Query: 101 EVFQGGFILEKIDGPL-STGHLVLADTDVK-------NNPAVTFNYFSHPQDLSRCVYGI 256 E ++E +GP ST +LAD DV N VT +YF QD++R + + Sbjct: 324 EAIAADLVVEGANGPTTSTADSILADRDVAVIPDILANAGGVTVSYFEWLQDINRRAWSL 383 Query: 257 KTIEKILK 280 + + L+ Sbjct: 384 ERVNDELE 391
>CDAN1_MOUSE (Q8CC12) Codanin-1 (Fragment)| Length = 468 Score = 30.0 bits (66), Expect = 3.7 Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 2/50 (4%) Frame = +2 Query: 35 PPKQRSLEL--AREYAHNKLSLPKEVFQGGFILEKIDGPLSTGHLVLADT 178 PP Q LE AR H LSL K+ FQG L+ + P + G +LADT Sbjct: 340 PPTQHRLERGHARRLLHMLLSLWKDDFQGPVPLQLLLSPRNVG--LLADT 387
>CLPX_SHEON (Q8EG18) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 426 Score = 29.6 bits (65), Expect = 4.8 Identities = 39/179 (21%), Positives = 70/179 (39%), Gaps = 28/179 (15%) Frame = +2 Query: 41 KQRSLELAREYAHNKLSLPKEVFQGGFILEKIDGPLSTGHLVLADTDVK--NNP-----A 199 K S+ + Y K S PK+ + G + GP +G +LA+T + N P A Sbjct: 87 KVLSVAVYNHYKRLKNSSPKDGVELGKSNILLIGPTGSGKTLLAETLARSLNVPFTMADA 146 Query: 200 VTFNYFSHPQD---------LSRCVYGIK----------TIEKILKTNSFAHLTPDGAGY 322 T + + L +C Y ++ I+KI + + +T D +G Sbjct: 147 TTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQRGIVYIDEIDKISRKSDNPSITRDVSGE 206 Query: 323 EMERVLNMSVQANVNLIPKHTNTTESLEQFCKDTXITIWHYHGGCHVG--KVVDQQHRV 493 +++ L ++ V +P ++F + I GG G KV++Q+ V Sbjct: 207 GVQQALLKLIEGTVAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHV 265
>BETA_STAES (Q8CMY2) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 572 Score = 29.6 bits (65), Expect = 4.8 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = +2 Query: 140 GPL---STGHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKILK 280 GP+ S G L + D P++ FNY S +D V I+ ILK Sbjct: 391 GPMYSNSRGSLKIKSKDPFEKPSIVFNYLSTKEDEREWVEAIRVARNILK 440
>BETA_STAEQ (Q5HL11) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 572 Score = 29.3 bits (64), Expect = 6.3 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = +2 Query: 140 GPL---STGHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKILK 280 GP+ S G L + D P++ FNY S +D + I+ ILK Sbjct: 391 GPMYSNSRGSLKIKSKDPFEKPSIVFNYLSTKEDEREWIEAIRVARNILK 440
>ISPE_PROM9 (Q31B18) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 311 Score = 29.3 bits (64), Expect = 6.3 Identities = 24/87 (27%), Positives = 40/87 (45%), Gaps = 4/87 (4%) Frame = +2 Query: 107 FQGGFILEKIDGPLSTGHLVLADTDVKNNPAVTF----NYFSHPQDLSRCVYGIKTIEKI 274 F G +LEK+D G ++L + +V + A T+ N F H R + I+ I K Sbjct: 155 FGRGEVLEKLDSNFEYGVILLKNPNVSVSTAETYKKYSNRFCHQYLTDREM--IENIRKN 212 Query: 275 LKTNSFAHLTPDGAGYEMERVLNMSVQ 355 L+ N +L D ++ L + V+ Sbjct: 213 LRENGLNNLNLDNQHLSIKNDLQLVVE 239
>CIR1_CITFR (P23182) Citrolysin protein 1| Length = 618 Score = 29.3 bits (64), Expect = 6.3 Identities = 14/37 (37%), Positives = 19/37 (51%) Frame = +1 Query: 382 YQYHRIPRAILQGHGYHHLALPWWVSCREGGRPAAPG 492 Y+ R+ A L +HHL P+W R+ G PA G Sbjct: 229 YRLKRVRPASLFHQLFHHLRRPFWNLLRQTGCPAVAG 265
>ACHB_HUMAN (P11230) Acetylcholine receptor protein, beta subunit precursor| Length = 501 Score = 28.9 bits (63), Expect = 8.2 Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 5/36 (13%) Frame = -1 Query: 265 NGLDAIDTTAEILWMAEIV-----ESNCRVVLDISV 173 +G+D++ TAE +W+ ++V + N V LDISV Sbjct: 96 DGIDSLRITAESVWLPDVVLLNNNDGNFDVALDISV 131
>BETA_STAS1 (Q4A0Q1) Choline dehydrogenase (EC 1.1.99.1) (CHD) (CDH)| Length = 560 Score = 28.9 bits (63), Expect = 8.2 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 3/49 (6%) Frame = +2 Query: 140 GPL---STGHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIEKIL 277 GP+ S GHL + D P FNY S +D V IK IL Sbjct: 386 GPMYSNSRGHLKIKSKDPFVKPDFVFNYLSTEEDKREWVEAIKVARNIL 434
>PHEA_BUCAP (Q8K9F8) P-protein [Includes: Chorismate mutase (EC 5.4.99.5) (CM);| Prephenate dehydratase (EC 4.2.1.51) (PDT)] Length = 385 Score = 28.9 bits (63), Expect = 8.2 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 2/86 (2%) Frame = +2 Query: 119 FILEKIDGPLSTGHLVLADTDVKNNPAVTFNYFSHPQDLSRCVYGIKTIE--KILKTNSF 292 FI+ +I+ +S H +LA ++ N +SHPQ +C Y IK KI TNS Sbjct: 179 FIIGEIN--ISINHCLLAIKKIELNKIKAV--YSHPQPFQQCSYFIKKFPNWKIQYTNST 234 Query: 293 AHLTPDGAGYEMERVLNMSVQANVNL 370 A M++++ ++ N L Sbjct: 235 AD--------AMKKIVKYNITTNAAL 252 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,732,390 Number of Sequences: 219361 Number of extensions: 1567201 Number of successful extensions: 4445 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 4355 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4436 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3638905326 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
