ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet10g02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y169_METJA (Q57633) Hypothetical ATP-binding protein MJ0169 30 1.5
2PROB_BURS3 (Q39JU6) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glut... 30 1.5
3PROB_BURPS (Q63QM1) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glut... 30 1.5
4PROB_BURP1 (Q3JNG1) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glut... 30 1.5
5PROB_BURMA (Q62GV5) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glut... 30 1.5
6YDBH_ECOLI (P52645) Hypothetical protein ydbH 28 7.4

>Y169_METJA (Q57633) Hypothetical ATP-binding protein MJ0169|
          Length = 263

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = -2

Query: 333 LHVVGRVAGELAADEVQVTAAGPVVVEV--DELQAAAAL 223
           L+ VGR  GE+  DE+++   G V+VEV  DE   +AAL
Sbjct: 170 LNRVGRDFGEMGRDEIEMLIKGKVLVEVPEDENVRSAAL 208



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>PROB_BURS3 (Q39JU6) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 372

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 17/55 (30%)
 Frame = -2

Query: 324 VGRVAGELAA-----DEVQVTAAGPVVV------------EVDELQAAAALGQVG 211
           +GR A ++AA      EV + ++G +              E+DELQAAAA+GQ+G
Sbjct: 32  IGRWAAQIAALRAQGKEVVLVSSGAIAEGMQRLGWSKRPREIDELQAAAAVGQMG 86



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>PROB_BURPS (Q63QM1) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 372

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 17/55 (30%)
 Frame = -2

Query: 324 VGRVAGELAA-----DEVQVTAAGPVVV------------EVDELQAAAALGQVG 211
           +GR A ++AA      EV + ++G +              E+DELQAAAA+GQ+G
Sbjct: 32  IGRWAAQIAALRGAGKEVVLVSSGAIAEGMQRLGWSKRPREIDELQAAAAVGQMG 86



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>PROB_BURP1 (Q3JNG1) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 372

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 17/55 (30%)
 Frame = -2

Query: 324 VGRVAGELAA-----DEVQVTAAGPVVV------------EVDELQAAAALGQVG 211
           +GR A ++AA      EV + ++G +              E+DELQAAAA+GQ+G
Sbjct: 32  IGRWAAQIAALRGAGKEVVLVSSGAIAEGMQRLGWSKRPREIDELQAAAAVGQMG 86



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>PROB_BURMA (Q62GV5) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 372

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 17/55 (30%)
 Frame = -2

Query: 324 VGRVAGELAA-----DEVQVTAAGPVVV------------EVDELQAAAALGQVG 211
           +GR A ++AA      EV + ++G +              E+DELQAAAA+GQ+G
Sbjct: 32  IGRWAAQIAALRGAGKEVVLVSSGAIAEGMQRLGWSKRPREIDELQAAAAVGQMG 86



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>YDBH_ECOLI (P52645) Hypothetical protein ydbH|
          Length = 879

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 14/51 (27%), Positives = 22/51 (43%)
 Frame = +1

Query: 184 PEQFHAVMFTNLTESGGRLQLIDLYYDWPRGRNLNLIRSQLSGDPTYDVEW 336
           P   HA    NL +      L+D   DW       ++ ++ +GDP  D+ W
Sbjct: 205 PVSGHATATLNLPQEPS---LVDAELDWQENSGQLIVLARDNGDPLLDLPW 252


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,737,017
Number of Sequences: 219361
Number of extensions: 380259
Number of successful extensions: 1231
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 80,573,946
effective HSP length: 89
effective length of database: 61,050,817
effective search space used: 1465219608
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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