Clone Information

BLAST Search Result

Clone Name	baet10f03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla...	190	1e-48
2	CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl...	190	1e-48
3	CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla...	189	2e-48
4	CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl...	186	2e-47
5	CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast...	184	1e-46
6	CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl...	183	1e-46
7	CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla...	183	2e-46
8	CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast...	182	3e-46
9	CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl...	182	4e-46
10	CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla...	181	5e-46
11	CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast...	181	6e-46
12	CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl...	180	1e-45
13	CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl...	179	2e-45
14	CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla...	179	2e-45
15	CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla...	179	3e-45
16	CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla...	179	3e-45
17	CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast...	178	4e-45
18	CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl...	178	4e-45
19	CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop...	178	5e-45
20	CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla...	177	7e-45
21	CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl...	177	9e-45
22	CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla...	177	9e-45
23	CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl...	177	1e-44
24	CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop...	176	2e-44
25	CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop...	175	3e-44
26	CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast...	173	1e-43
27	CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast...	172	2e-43
28	CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla...	172	2e-43
29	CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl...	172	2e-43
30	CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl...	172	3e-43
31	CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ...	171	5e-43
32	CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe...	171	5e-43
33	CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl...	170	1e-42
34	CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe...	169	3e-42
35	CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl...	168	6e-42
36	CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop...	159	3e-39
37	CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast...	157	8e-39
38	CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla...	154	1e-37
39	CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl...	153	1e-37
40	CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla...	153	1e-37
41	CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty...	153	2e-37
42	CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl...	152	2e-37
43	CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast...	151	5e-37
44	CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe...	151	7e-37
45	CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla...	150	2e-36
46	CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo...	147	8e-36
47	CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla...	144	7e-35
48	CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ...	144	1e-34
49	CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ...	141	7e-34
50	CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ...	137	1e-32
51	CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl...	135	5e-32
52	CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ...	132	3e-31
53	CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type...	121	6e-28
54	CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type...	119	3e-27
55	CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop...	116	2e-26
56	CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type...	112	3e-25
57	CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type...	90	3e-18
58	CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro...	84	2e-16
59	CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla...	80	2e-15
60	CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast...	74	1e-13
61	LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre...	68	8e-12
62	CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl...	65	9e-11
63	LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre...	60	2e-09
64	CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla...	55	5e-08
65	CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop...	54	2e-07
66	CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch...	54	2e-07
67	CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla...	53	3e-07
68	CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch...	52	6e-07
69	CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloropl...	39	0.005
70	FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ...	39	0.007
71	CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo...	36	0.033
72	CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo...	36	0.043
73	CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo...	36	0.043
74	CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloropl...	35	0.096
75	CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29	34	0.16
76	GDF6_MOUSE (P43028) Growth/differentiation factor 6 precursor (G...	30	1.8
77	BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein sh...	30	1.8
78	CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloropl...	30	2.4
79	MUC13_MOUSE (P19467) Mucin-13 precursor (Cell surface antigen 11...	29	4.0
80	GDF6_RAT (Q6HA10) Growth/differentiation factor 6 precursor (GDF...	29	4.0
81	YMT1_YEAST (Q04212) Hypothetical oxidoreductase YMR041C (EC 1.-....	29	4.0
82	GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--...	29	4.0
83	GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--...	29	4.0
84	GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	29	4.0
85	GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	29	4.0
86	GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	29	4.0
87	GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	29	4.0
88	SCN5A_HUMAN (Q14524) Sodium channel protein type 5 alpha subunit...	29	5.3
89	S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (G...	29	5.3
90	GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	29	5.3
91	L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chlor...	29	5.3
92	YAB9_YEAST (P31380) Hypothetical 128.5 kDa ATP-dependent helicas...	29	5.3
93	GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	29	5.3
94	GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	6.9
95	GLNA_SQUAC (P41320) Glutamine synthetase, mitochondrial precurso...	28	9.0
96	MRS2_ASPFU (Q4WCV3) Inner membrane magnesium transporter mrs2, m...	28	9.0
97	GLNA_CHICK (P16580) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	9.0

>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score =  190 bits (482), Expect = 1e-48
 Identities = 95/124 (76%), Positives = 101/124 (81%), Gaps = 6/124 (4%)
 Frame = +3

Query: 72  MAATTMALSSPA-----MKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233
           MAA+TMALSSPA     +KL+ GAS V G GR+TMR           PWYG DRV YLGP
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGP 60

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
            SGEPPSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 414 NGVK 425
           NGVK
Sbjct: 121 NGVK 124

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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score =  190 bits (482), Expect = 1e-48
 Identities = 95/124 (76%), Positives = 99/124 (79%), Gaps = 6/124 (4%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233
           MAA TMALSSP     A+KL+  AS + G GRITMR           PWYGPDRV YLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
            SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 414 NGVK 425
           NGVK
Sbjct: 121 NGVK 124

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>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score =  189 bits (480), Expect = 2e-48
 Identities = 94/120 (78%), Positives = 97/120 (80%), Gaps = 2/120 (1%)
 Frame = +3

Query: 72  MAATTMALSSPAMKLAGASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYLGPLSGE 245
           MAA TMALSSPA+    A+ V G GRITMR             PWYG DRVLYLGPLSGE
Sbjct: 1   MAAATMALSSPALAGKAAAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGE 60

Query: 246 PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 425
           PPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVK
Sbjct: 61  PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVK 120

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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score =  186 bits (472), Expect = 2e-47
 Identities = 92/124 (74%), Positives = 98/124 (79%), Gaps = 6/124 (4%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233
           MAA TMALSSP     A+KL+  A  + G GR++MR           PWYGPDRV YLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
            SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 414 NGVK 425
           NGVK
Sbjct: 121 NGVK 124

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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score =  184 bits (466), Expect = 1e-46
 Identities = 94/126 (74%), Positives = 100/126 (79%), Gaps = 8/126 (6%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLAG-ASYVLGGGRITMRXXXXX--XXXXXXPWYGPDRVLYL 227
           MA++TMALSSP     A+KL   AS ++G GRITMR             PWYGPDRV YL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 408 ARNGVK 425
           ARNGVK
Sbjct: 121 ARNGVK 126

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>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score =  183 bits (465), Expect = 1e-46
 Identities = 92/126 (73%), Positives = 100/126 (79%), Gaps = 8/126 (6%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXX--PWYGPDRVLYL 227
           MAA+TMALSSP     A+KL+  +S + G G++TMR             PWYGPDRV YL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 408 ARNGVK 425
           ARNGVK
Sbjct: 121 ARNGVK 126

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>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score =  183 bits (464), Expect = 2e-46
 Identities = 93/124 (75%), Positives = 96/124 (77%), Gaps = 6/124 (4%)
 Frame = +3

Query: 72  MAATTMALSSPAMKLAG---ASYVLGGGRITMRXXXXX---XXXXXXPWYGPDRVLYLGP 233
           MAA TMALSSP M  A    +S + G  RITMR              PWYG DRVLYLGP
Sbjct: 1   MAAATMALSSPVMARAAPSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGP 60

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
           LSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 61  LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 120

Query: 414 NGVK 425
           NGVK
Sbjct: 121 NGVK 124

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>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score =  182 bits (462), Expect = 3e-46
 Identities = 91/125 (72%), Positives = 98/125 (78%), Gaps = 7/125 (5%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 230
           MAATTM+LSS      A+K   +S ++G  R+ MR             PWYG DRVLYLG
Sbjct: 1   MAATTMSLSSSSFAGKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLG 60

Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410
           PLSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 61  PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120

Query: 411 RNGVK 425
           RNGVK
Sbjct: 121 RNGVK 125

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>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score =  182 bits (461), Expect = 4e-46
 Identities = 92/125 (73%), Positives = 99/125 (79%), Gaps = 7/125 (5%)
 Frame = +3

Query: 72  MAATTMALSSP----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 230
           MAA+T ALSSP    A+KL+  +S V G G++TMR             PWYGPDRV YLG
Sbjct: 1   MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLG 60

Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410
           P SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120

Query: 411 RNGVK 425
           RNGVK
Sbjct: 121 RNGVK 125

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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score =  181 bits (460), Expect = 5e-46
 Identities = 92/125 (73%), Positives = 99/125 (79%), Gaps = 7/125 (5%)
 Frame = +3

Query: 72  MAATTMALSSP----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 230
           MAA+T ALSSP    A+KL+  +S V G G++TMR             PWYGPDRV YLG
Sbjct: 1   MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLG 60

Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410
           P SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120

Query: 411 RNGVK 425
           RNGVK
Sbjct: 121 RNGVK 125

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>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score =  181 bits (459), Expect = 6e-46
 Identities = 91/124 (73%), Positives = 95/124 (76%), Gaps = 6/124 (4%)
 Frame = +3

Query: 72  MAATTMALSSPAMKLAGA---SYVLGGGRITMRXXXXXX---XXXXXPWYGPDRVLYLGP 233
           MA++TMALSS A         S   G  R+TMR              PWYGPDRVLYLGP
Sbjct: 1   MASSTMALSSTAFAGKAVNVPSSSFGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGP 60

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
           LSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61  LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 414 NGVK 425
           NGVK
Sbjct: 121 NGVK 124

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>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score =  180 bits (457), Expect = 1e-45
 Identities = 91/126 (72%), Positives = 98/126 (77%), Gaps = 8/126 (6%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYL 227
           MA +TMALSS      A+KL+  +S + G GR+TMR             PWYGPDRV YL
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 408 ARNGVK 425
           ARNGVK
Sbjct: 121 ARNGVK 126

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>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score =  179 bits (455), Expect = 2e-45
 Identities = 91/126 (72%), Positives = 98/126 (77%), Gaps = 8/126 (6%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 227
           MAA TMALSS      A+KL+  +S + G G++TMR             PWYGPDRV YL
Sbjct: 1   MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYL 60

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 408 ARNGVK 425
           ARNGVK
Sbjct: 121 ARNGVK 126

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>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score =  179 bits (454), Expect = 2e-45
 Identities = 89/122 (72%), Positives = 97/122 (79%), Gaps = 5/122 (4%)
 Frame = +3

Query: 75  AATTMALSSPAMKLAGASYVLGG-----GRITMRXXXXXXXXXXXPWYGPDRVLYLGPLS 239
           AA++MALSSP+  LAG +  LG      GR++MR           PWYGPDRV YLGP S
Sbjct: 3   AASSMALSSPS--LAGKAVKLGPSAPEVGRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFS 60

Query: 240 GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 419
           GEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNG
Sbjct: 61  GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 120

Query: 420 VK 425
           VK
Sbjct: 121 VK 122

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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score =  179 bits (453), Expect = 3e-45
 Identities = 90/126 (71%), Positives = 99/126 (78%), Gaps = 8/126 (6%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 227
           MAA+TMALSS      A+KL+  +S + G G++TMR             PWYGP+RV YL
Sbjct: 1   MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYL 60

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 408 ARNGVK 425
           ARNGVK
Sbjct: 121 ARNGVK 126

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>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score =  179 bits (453), Expect = 3e-45
 Identities = 93/125 (74%), Positives = 99/125 (79%), Gaps = 7/125 (5%)
 Frame = +3

Query: 72  MAATTMALSSPA-----MKLA-GASYVLGGGRITMRXXXXXXXX-XXXPWYGPDRVLYLG 230
           MAA+TMALSSPA     +KL+  AS VLG GR+TMR            PWYG DRV YLG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410
           P SGE PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 411 RNGVK 425
           RNGVK
Sbjct: 121 RNGVK 125

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>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score =  178 bits (452), Expect = 4e-45
 Identities = 91/124 (73%), Positives = 99/124 (79%), Gaps = 6/124 (4%)
 Frame = +3

Query: 72  MAATTMALSSPAM-----KLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233
           MAA+TMALSSPA+     K+A  +S + G GR++MR           PWYGPDRV YLGP
Sbjct: 1   MAASTMALSSPALAGKAVKVAPSSSELFGNGRVSMRKTVKAPVSDS-PWYGPDRVKYLGP 59

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
            SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 60  FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 119

Query: 414 NGVK 425
           NGVK
Sbjct: 120 NGVK 123

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>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score =  178 bits (452), Expect = 4e-45
 Identities = 90/124 (72%), Positives = 95/124 (76%), Gaps = 6/124 (4%)
 Frame = +3

Query: 72  MAATTMALSSPAMKLAGA---SYVLGGGRITMRXXXXXX---XXXXXPWYGPDRVLYLGP 233
           MA++TMALSS A         S + G  R+TMR              PWYGPDRVLYLGP
Sbjct: 1   MASSTMALSSTAFAGKAVNVPSSLFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGP 60

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
           LSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 61  LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 120

Query: 414 NGVK 425
           NGVK
Sbjct: 121 NGVK 124

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>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score =  178 bits (451), Expect = 5e-45
 Identities = 89/126 (70%), Positives = 97/126 (76%), Gaps = 8/126 (6%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLAGASY-VLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYL 227
           MAATTMALSS      A+KL+ +S  + G G++TMR             PWYGPDRV YL
Sbjct: 1   MAATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYL 60

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP SGE PSYL+GEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 
Sbjct: 61  GPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 120

Query: 408 ARNGVK 425
           ARNG+K
Sbjct: 121 ARNGIK 126

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>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score =  177 bits (450), Expect = 7e-45
 Identities = 90/126 (71%), Positives = 97/126 (76%), Gaps = 8/126 (6%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 227
           M A+TMALSSP     A+KL+  +S + G G+  MR             PWYGPDRV YL
Sbjct: 1   MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYL 60

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 408 ARNGVK 425
           ARNGVK
Sbjct: 121 ARNGVK 126

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>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score =  177 bits (449), Expect = 9e-45
 Identities = 91/125 (72%), Positives = 95/125 (76%), Gaps = 7/125 (5%)
 Frame = +3

Query: 72  MAATTMALSSPAMK------LAGASYVLGGGRITMRXXXXXXXX-XXXPWYGPDRVLYLG 230
           MAA+TMALSSPA           AS VLG GR+TMR            PWYG DRV YLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410
           P SGE PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 411 RNGVK 425
           RNGVK
Sbjct: 121 RNGVK 125

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>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score =  177 bits (449), Expect = 9e-45
 Identities = 91/123 (73%), Positives = 96/123 (78%), Gaps = 5/123 (4%)
 Frame = +3

Query: 72  MAATTMALSSPAMKLAGASYVLGG---GRITMRXXXXX--XXXXXXPWYGPDRVLYLGPL 236
           MAA+TMA+SS AM  AG    +G    GRITMR             PWYGPDRV YLGP 
Sbjct: 1   MAASTMAISSTAM--AGTPIKVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPF 58

Query: 237 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 416
           SGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RN
Sbjct: 59  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 118

Query: 417 GVK 425
           GVK
Sbjct: 119 GVK 121

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>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score =  177 bits (448), Expect = 1e-44
 Identities = 87/125 (69%), Positives = 94/125 (75%), Gaps = 7/125 (5%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 230
           MAA TMA+SS      A+ +  +S + G G+ TMR             PWYGPDRV YLG
Sbjct: 1   MAAATMAISSSSFAGKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLG 60

Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410
           P SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL A
Sbjct: 61  PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFA 120

Query: 411 RNGVK 425
           RNGVK
Sbjct: 121 RNGVK 125

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>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score =  176 bits (447), Expect = 2e-44
 Identities = 90/126 (71%), Positives = 96/126 (76%), Gaps = 8/126 (6%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 227
           MAA TMALSSP     A+K +  +S + G G+ TMR             PWYGPDRV YL
Sbjct: 1   MAAATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYL 60

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP SGE PSYL+GEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 408 ARNGVK 425
           ARNGVK
Sbjct: 121 ARNGVK 126

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>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score =  175 bits (444), Expect = 3e-44
 Identities = 89/126 (70%), Positives = 95/126 (75%), Gaps = 8/126 (6%)
 Frame = +3

Query: 72  MAATTMALSSPA-----MKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 227
           MAA TMALSS       +KL+  +S + G G+ TMR             PWYGPDRV YL
Sbjct: 1   MAAATMALSSSTFAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYL 60

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 120

Query: 408 ARNGVK 425
           ARNGVK
Sbjct: 121 ARNGVK 126

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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score =  173 bits (439), Expect = 1e-43
 Identities = 87/127 (68%), Positives = 94/127 (74%), Gaps = 9/127 (7%)
 Frame = +3

Query: 72  MAATTMALSSPAM-------KLAGASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLY 224
           MAA++MALSSP +           +S  LGG R TMR             PWYGPDRV Y
Sbjct: 1   MAASSMALSSPTLTGKPVETSANPSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKY 60

Query: 225 LGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 404
           LGP SGE PSYL+GEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPEL
Sbjct: 61  LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPEL 120

Query: 405 LARNGVK 425
           L+RNGVK
Sbjct: 121 LSRNGVK 127

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>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score =  172 bits (437), Expect = 2e-43
 Identities = 79/97 (81%), Positives = 82/97 (84%)
 Frame = +3

Query: 135 LGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSAD 314
           LG GR++MR           PWYGPDRV YLGP SGEPPSYL+GEFPGDYGWDTAGLSAD
Sbjct: 8   LGVGRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSAD 67

Query: 315 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 425
           PETFAKNRELEVIH RWAMLGALGCVFPELLARNGVK
Sbjct: 68  PETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVK 104

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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score =  172 bits (437), Expect = 2e-43
 Identities = 88/124 (70%), Positives = 93/124 (75%), Gaps = 6/124 (4%)
 Frame = +3

Query: 72  MAATTMALSSPAM------KLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233
           MAA TMALSS          L+ +S V G  R++MR           PWYGPDRV YLGP
Sbjct: 1   MAAATMALSSSTFAGKAVKNLSSSSEVQGDARVSMRKTAATKKVGS-PWYGPDRVKYLGP 59

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
            SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 60  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLAR 119

Query: 414 NGVK 425
           NGVK
Sbjct: 120 NGVK 123

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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score =  172 bits (437), Expect = 2e-43
 Identities = 86/126 (68%), Positives = 95/126 (75%), Gaps = 7/126 (5%)
 Frame = +3

Query: 69  AMAATTMALSSPAM-----KLAGASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYL 227
           A ++++MALSSP +     KL  +S  LG  R TMR             PWYGPDRV YL
Sbjct: 3   ASSSSSMALSSPTLAGKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYL 62

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL
Sbjct: 63  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 122

Query: 408 ARNGVK 425
           +RNGVK
Sbjct: 123 SRNGVK 128

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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score =  172 bits (436), Expect = 3e-43
 Identities = 87/123 (70%), Positives = 92/123 (74%), Gaps = 5/123 (4%)
 Frame = +3

Query: 72  MAATTMALSSPAM---KLAGASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYLGPL 236
           MAA TMA++S A+     AG   V G GRITMR             PWYG DRVLYLGPL
Sbjct: 1   MAAATMAITSRALVGKPAAGTRDVFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPL 60

Query: 237 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 416
           SG PPSYL+GEFPGDYGWDT GLSADPETFAKNRELEVIHCRWA+   LGCVFPELLARN
Sbjct: 61  SGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARN 120

Query: 417 GVK 425
           GVK
Sbjct: 121 GVK 123

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>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score =  171 bits (434), Expect = 5e-43
 Identities = 81/112 (72%), Positives = 88/112 (78%), Gaps = 1/112 (0%)
 Frame = +3

Query: 93  LSSPAMKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGE 269
           L+  A+KL+  A  + G  + TMR           PWYGPDRV YLGP SGEPPSYL+GE
Sbjct: 3   LAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 62

Query: 270 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 425
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVK
Sbjct: 63  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVK 114

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>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score =  171 bits (434), Expect = 5e-43
 Identities = 86/130 (66%), Positives = 91/130 (70%), Gaps = 5/130 (3%)
 Frame = +3

Query: 51  CSIRQQAMAATTMALSSPAMK--LAGASYVLGGGRITMRXXXX---XXXXXXXPWYGPDR 215
           C I   A A   ++   P     L   + V G  R+TMR              PWYGPDR
Sbjct: 4   CGIGSCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGPDR 63

Query: 216 VLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVF 395
           VLYLGP SGEPPSYL+GEFPGDYGWDTAGLSADPE FAKNRELEVIHCRWAMLGALGCVF
Sbjct: 64  VLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVF 123

Query: 396 PELLARNGVK 425
           PELLARNGVK
Sbjct: 124 PELLARNGVK 133

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>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score =  170 bits (431), Expect = 1e-42
 Identities = 84/125 (67%), Positives = 92/125 (73%), Gaps = 7/125 (5%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 230
           MAA TMALSS      A+ +  +S +   G++TMR             PWYGPDRV YLG
Sbjct: 1   MAAATMALSSSSFAGKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLG 60

Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410
           P SGE PSYL+GEFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL A
Sbjct: 61  PFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFA 120

Query: 411 RNGVK 425
           RNGVK
Sbjct: 121 RNGVK 125

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>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score =  169 bits (427), Expect = 3e-42
 Identities = 81/108 (75%), Positives = 84/108 (77%), Gaps = 3/108 (2%)
 Frame = +3

Query: 111 KLAGASYVLGGGRITMRXXX---XXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGD 281
           +L G     G  R+TMR              PWYGPDRVLYLGP SGEPPSYL+GEFPGD
Sbjct: 30  QLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGD 89

Query: 282 YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 425
           YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVK
Sbjct: 90  YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVK 137

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>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score =  168 bits (425), Expect = 6e-42
 Identities = 80/108 (74%), Positives = 84/108 (77%), Gaps = 3/108 (2%)
 Frame = +3

Query: 111 KLAGASYVLGGGRITMRXXX---XXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGD 281
           +L G     G  R+TMR              PWYGPDRV+YLGP SGEPPSYL+GEFPGD
Sbjct: 30  QLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGD 89

Query: 282 YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 425
           YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVK
Sbjct: 90  YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVK 137

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>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score =  159 bits (402), Expect = 3e-39
 Identities = 80/125 (64%), Positives = 93/125 (74%), Gaps = 1/125 (0%)
 Frame = +3

Query: 54  SIRQQAMAA-TTMALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLG 230
           +I+Q A A  T +  S+  +   GA   +GGGR++MR            WYGPDR  YLG
Sbjct: 5   AIQQSAFAGQTALKQSNELVCKIGA---VGGGRVSMRRTVKSAPTSI--WYGPDRPKYLG 59

Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410
           P S + PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE+L+
Sbjct: 60  PFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILS 119

Query: 411 RNGVK 425
           +NGVK
Sbjct: 120 KNGVK 124

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>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score =  157 bits (398), Expect = 8e-39
 Identities = 80/126 (63%), Positives = 90/126 (71%), Gaps = 2/126 (1%)
 Frame = +3

Query: 54  SIRQQAMAATTMALSSPAM--KLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYL 227
           +I+Q A A  T+      +  K+ G      GGR++MR            WYGPDR  YL
Sbjct: 5   TIQQSAFAGQTLLKPQNELVRKVGG-----NGGRVSMRRTIKSAPESI--WYGPDRPKYL 57

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP S + PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 58  GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117

Query: 408 ARNGVK 425
           A+NGVK
Sbjct: 118 AKNGVK 123

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>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score =  154 bits (388), Expect = 1e-37
 Identities = 83/123 (67%), Positives = 89/123 (72%), Gaps = 5/123 (4%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPL 236
           MAA+TMALSS      AMKLA ++  LG GR++MR           PWYGPDRV YLGP 
Sbjct: 1   MAASTMALSSSSLAGQAMKLAPSTPELGVGRVSMRKTAPKTVSSGSPWYGPDRVKYLGPF 60

Query: 237 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 416
           SGE PSYL+GEF G        LSADPETFAKNRELEVIH RWAMLGALGCVFPELLARN
Sbjct: 61  SGEAPSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARN 112

Query: 417 GVK 425
           GVK
Sbjct: 113 GVK 115

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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score =  153 bits (387), Expect = 1e-37
 Identities = 77/123 (62%), Positives = 87/123 (70%)
 Frame = +3

Query: 54  SIRQQAMAATTMALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233
           +I+Q A A  T   S   +     S+  GGGR TMR            WYG DR  YLGP
Sbjct: 5   AIQQSAFAGQTALKSQNELVRKIGSF--GGGRATMRRTVKSAPQSI--WYGEDRPKYLGP 60

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
            S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 414 NGV 422
           NGV
Sbjct: 121 NGV 123

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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score =  153 bits (387), Expect = 1e-37
 Identities = 76/125 (60%), Positives = 87/125 (69%)
 Frame = +3

Query: 51  CSIRQQAMAATTMALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLG 230
           C+I+Q A     +  S         ++  G GRITMR            WYG DR  YLG
Sbjct: 4   CAIQQSAFVGQAVGKSQNEFIRKVGNF--GEGRITMRRTVKSAPQSI--WYGEDRPKYLG 59

Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410
           P S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L+
Sbjct: 60  PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILS 119

Query: 411 RNGVK 425
           +NGVK
Sbjct: 120 KNGVK 124

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>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score =  153 bits (386), Expect = 2e-37
 Identities = 69/77 (89%), Positives = 72/77 (93%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 374
           PW+GPD V YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAML
Sbjct: 11  PWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 70

Query: 375 GALGCVFPELLARNGVK 425
           GALGCVFPELL+RNGVK
Sbjct: 71  GALGCVFPELLSRNGVK 87

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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score =  152 bits (385), Expect = 2e-37
 Identities = 77/124 (62%), Positives = 86/124 (69%)
 Frame = +3

Query: 54  SIRQQAMAATTMALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233
           +I Q A A  T   S   +     S+   GGR TMR            WYG DR  YLGP
Sbjct: 5   AIEQSAFAGQTALKSQNELVRKIGSF--NGGRATMRRTVKSAPQSI--WYGEDRPKYLGP 60

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
            S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 414 NGVK 425
           NGVK
Sbjct: 121 NGVK 124

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>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score =  151 bits (382), Expect = 5e-37
 Identities = 71/95 (74%), Positives = 77/95 (81%)
 Frame = +3

Query: 141 GGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPE 320
           GGRITMR            WYGPDR  YLGP S + PSYL+GEFPGDYGWDTAGLSADPE
Sbjct: 30  GGRITMRRTVKSAPQSI--WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87

Query: 321 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 425
           TFA+NRELEVIH RWAMLGALGCVFPE+L++NGVK
Sbjct: 88  TFARNRELEVIHSRWAMLGALGCVFPEILSKNGVK 122



 Score = 28.5 bits (62), Expect = 6.9
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 270 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 419
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 187 YPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 235

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>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score =  151 bits (381), Expect = 7e-37
 Identities = 69/76 (90%), Positives = 70/76 (92%)
 Frame = +3

Query: 198 WYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 377
           WYG DR LYLGP SG PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG
Sbjct: 49  WYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 108

Query: 378 ALGCVFPELLARNGVK 425
           ALGCV PELLA+NGVK
Sbjct: 109 ALGCVTPELLAKNGVK 124

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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score =  150 bits (378), Expect = 2e-36
 Identities = 69/94 (73%), Positives = 76/94 (80%)
 Frame = +3

Query: 141 GGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPE 320
           GGR+TMR            WYG DR  YLGP S + PSYL+GEFPGDYGWDTAGLSADPE
Sbjct: 4   GGRVTMRRTVKSAPQSI--WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 61

Query: 321 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 422
           TFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV
Sbjct: 62  TFARNRELEVIHCRWAMLGALGCVFPEILSKNGV 95

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>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score =  147 bits (372), Expect = 8e-36
 Identities = 70/93 (75%), Positives = 74/93 (79%)
 Frame = +3

Query: 147 RITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETF 326
           RITMR            WYGPDR  YLGP S   PSYL+GEFPGDYGWDTA +SADPETF
Sbjct: 35  RITMRRTVRSAPESI--WYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETF 92

Query: 327 AKNRELEVIHCRWAMLGALGCVFPELLARNGVK 425
           AKNRELEVIHCRWAMLGALGCVFPELLA+NG+K
Sbjct: 93  AKNRELEVIHCRWAMLGALGCVFPELLAKNGLK 125

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>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score =  144 bits (364), Expect = 7e-35
 Identities = 69/96 (71%), Positives = 73/96 (76%)
 Frame = +3

Query: 138 GGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADP 317
           G  R TMR            WYGPDR  YLGP S + PSYL+GEFPGDYGWDTAGLSADP
Sbjct: 31  GQARFTMRRTVKSAPESI--WYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADP 88

Query: 318 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 425
           ETFA+NRELEVIH RWAMLGALGC FPELL +NGVK
Sbjct: 89  ETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVK 124

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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score =  144 bits (362), Expect = 1e-34
 Identities = 75/124 (60%), Positives = 87/124 (70%), Gaps = 5/124 (4%)
 Frame = +3

Query: 69  AMAATTMA---LSSPAMKLAGASYVLGG--GRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233
           AM +T +A   L  P  +L+    VLG    R+TMR            WYG DR  +LGP
Sbjct: 6   AMHSTALAGQSLVKPVNELSRK--VLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGP 63

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
            SGE PSYL+GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PELLA+
Sbjct: 64  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 123

Query: 414 NGVK 425
           +GVK
Sbjct: 124 SGVK 127



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = +3

Query: 228 GPLSGE--PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 401
           GPL GE   P Y  G F      D  GL+ DP+TFA+ +  E+ + R AM    G     
Sbjct: 182 GPL-GEVTDPIYPGGSF------DPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQA 234

Query: 402 LLARNG 419
           ++   G
Sbjct: 235 IVTGKG 240

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>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score =  141 bits (355), Expect = 7e-34
 Identities = 66/94 (70%), Positives = 74/94 (78%)
 Frame = +3

Query: 144 GRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPET 323
           GR +MR            WYG DR  +LGP S + PSYL+GEFPGDYGWDTAGLSADPET
Sbjct: 32  GRFSMRRTVKAVPQSI--WYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 89

Query: 324 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 425
           FAKNRELEVIH RWAMLGALGC+FPELL++NGV+
Sbjct: 90  FAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQ 123

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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score =  137 bits (345), Expect = 1e-32
 Identities = 74/134 (55%), Positives = 87/134 (64%), Gaps = 8/134 (5%)
 Frame = +3

Query: 36  ISSLLCSIRQQAMAATTMALS--------SPAMKLAGASYVLGGGRITMRXXXXXXXXXX 191
           ++S + +   +A+ A T  LS        SP   +A A+     GRITM           
Sbjct: 1   MASTIMAAASRAVVAKTPFLSGQGRAASASPLRDIAAAT----NGRITMGNDL------- 49

Query: 192 XPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 371
             WYGPDRV YLGP S + PSYL+GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAM
Sbjct: 50  --WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAM 107

Query: 372 LGALGCVFPELLAR 413
           LGALGCVFPE+L +
Sbjct: 108 LGALGCVFPEVLQK 121



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
 Frame = +3

Query: 213 RVLYLGPLSGEPPSYLSGE------FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 374
           +VL +G + G   + L G       +PG   +D  GL+ DP TFA+ +  E+ + R AM 
Sbjct: 166 QVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 225

Query: 375 GALGCVFPELLARNG 419
              G     ++   G
Sbjct: 226 SMFGFFVQAIVTGKG 240

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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score =  135 bits (339), Expect = 5e-32
 Identities = 59/72 (81%), Positives = 64/72 (88%)
 Frame = +3

Query: 198 WYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 377
           WYGPDRV YLGP S + PSYL+GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLG
Sbjct: 47  WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 106

Query: 378 ALGCVFPELLAR 413
           ALGC+FPE+L +
Sbjct: 107 ALGCIFPEVLEK 118



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +3

Query: 270 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 419
           +PG   +D  GL+ DP TFA+ +  E+ + R AM    G     ++   G
Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237

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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score =  132 bits (332), Expect = 3e-31
 Identities = 60/65 (92%), Positives = 62/65 (95%)
 Frame = +3

Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410
           P SGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH  WAMLGALGCVFPELL+
Sbjct: 1   PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60

Query: 411 RNGVK 425
           RNGVK
Sbjct: 61  RNGVK 65

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>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score =  121 bits (304), Expect = 6e-28
 Identities = 54/71 (76%), Positives = 60/71 (84%)
 Frame = +3

Query: 198 WYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 377
           WYGPDR  +LGP S   P+YL+GEFPGDYGWDTAGLSADPETF K RELEVIH RWA+LG
Sbjct: 39  WYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLG 98

Query: 378 ALGCVFPELLA 410
           ALG + PELL+
Sbjct: 99  ALGILTPELLS 109



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +3

Query: 270 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 419
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKG 228

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>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  119 bits (298), Expect = 3e-27
 Identities = 55/77 (71%), Positives = 64/77 (83%), Gaps = 1/77 (1%)
 Frame = +3

Query: 198 WYGPDRVLYLGPLS-GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 374
           +YGP+R  +LGP S    P+YL+GEFPGDYGWDTAGLSADPETF + RELE+IH RWAML
Sbjct: 36  FYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 95

Query: 375 GALGCVFPELLARNGVK 425
           GALGC  PELLA++G K
Sbjct: 96  GALGCQTPELLAKSGTK 112



 Score = 28.1 bits (61), Expect = 9.0
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 270 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 419
           +PG+  +D  GL+ DP+TFA+ +  E+ + R A     G     ++   G
Sbjct: 177 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKG 225

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>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score =  116 bits (291), Expect = 2e-26
 Identities = 56/69 (81%), Positives = 59/69 (85%)
 Frame = +3

Query: 213 RVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCV 392
           RV YLGP SGE PSYL+GEFPGDYGWDTAGLSA PETFAKNRELEVIH R AM  ALGC+
Sbjct: 58  RVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCI 117

Query: 393 FPELLARNG 419
           FPELL+  G
Sbjct: 118 FPELLSVMG 126

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>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  112 bits (281), Expect = 3e-25
 Identities = 50/73 (68%), Positives = 62/73 (84%), Gaps = 1/73 (1%)
 Frame = +3

Query: 198 WYGPDRVLYLGPLS-GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 374
           +YGPDR  +LGP S  + P YL+GEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+L
Sbjct: 33  FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92

Query: 375 GALGCVFPELLAR 413
           GALG + PELL++
Sbjct: 93  GALGILTPELLSQ 105



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +3

Query: 270 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 419
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM   LG     ++   G
Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKG 225

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>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 89.7 bits (221), Expect = 3e-18
 Identities = 47/77 (61%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
 Frame = +3

Query: 198 WYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 377
           +YGPD       L  + P   +GEFPGDYGWDTAGLSADPETF + RELE+IH R  +LG
Sbjct: 57  FYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLG 115

Query: 378 ALGCVFPELLA-RNGVK 425
           ALG V PELLA  +G+K
Sbjct: 116 ALGMVTPELLADEDGIK 132



 Score = 32.3 bits (72), Expect = 0.48
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +3

Query: 270 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 419
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM   LG     ++   G
Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKG 246

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>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 83.6 bits (205), Expect = 2e-16
 Identities = 42/77 (54%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
 Frame = +3

Query: 198 WYGPDRVLYL--GPLS-GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 368
           WYGPDR ++L  G L   E P YL+GE  GDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 62  WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWA 121

Query: 369 MLGALGCVFPELLARNG 419
           MLGA G + PE L + G
Sbjct: 122 MLGAAGFIIPEALNKYG 138

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>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
 Frame = +3

Query: 87  MALSSPAMKLAGA------SYVLGGGRITMRXXXXXXXXXXXPWY----GPDRVLYLGPL 236
           +A SSP+ +  G+      +  LGG R+ +                    PDR L+    
Sbjct: 13  VAFSSPSSRRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFP-- 70

Query: 237 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 416
              PP +L G  PGD+G+D  GL++DPE+   N++ E++HCRWAMLGA G   PELL + 
Sbjct: 71  GSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKI 130

Query: 417 GV 422
           G+
Sbjct: 131 GI 132

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>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 73.9 bits (180), Expect = 1e-13
 Identities = 34/72 (47%), Positives = 44/72 (61%)
 Frame = +3

Query: 207 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 386
           PDR L+       PP +L G  PGD+G+D  GL +DPE+   N + E++H RWAMLGA G
Sbjct: 63  PDRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAG 120

Query: 387 CVFPELLARNGV 422
              PE L + GV
Sbjct: 121 IFIPEFLTKIGV 132

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>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 68.2 bits (165), Expect = 8e-12
 Identities = 31/54 (57%), Positives = 39/54 (72%)
 Frame = +3

Query: 246 PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           PP YL+GE  GD G+D AGL+ADP TF + +  EV HCR +ML  +GC+ PELL
Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELL 433



 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 29/59 (49%), Positives = 41/59 (69%)
 Frame = +3

Query: 237 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
           + EPP+ L+GE+P D G+D   L+ADP+ +A+ R  EV H R AML  +GC+ PELL +
Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGK 251



 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 28/55 (50%), Positives = 39/55 (70%)
 Frame = +3

Query: 249 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
           PS+L+GE+ GD G+D AGL+ADP+TF + R  EV H R AML  +G + P+ L +
Sbjct: 12  PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYLGK 66

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>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 64.7 bits (156), Expect = 9e-11
 Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = +3

Query: 234 LSGEP-PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           + G+P PSYL G  PGD+G+D+ GL   P    + +E E+IHCRWAML   G + PE L
Sbjct: 50  MPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL 108

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>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 25/57 (43%), Positives = 39/57 (68%)
 Frame = +3

Query: 243 EPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
           +PP++L+GE+P D G+D   ++ADP  +A+ R  EV H R +ML  +G + PELL +
Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELLGK 223



 Score = 35.0 bits (79), Expect = 0.074
 Identities = 18/36 (50%), Positives = 23/36 (63%)
 Frame = +3

Query: 315 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 422
           P  + + R  EV + R AML  +GCV+PELL  NGV
Sbjct: 1   PTVYERMRVAEVFNGRLAMLAIVGCVYPELLG-NGV 35

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>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 55.5 bits (132), Expect = 5e-08
 Identities = 24/58 (41%), Positives = 35/58 (60%)
 Frame = +3

Query: 249 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 422
           P YL+G   GD G+D  GL+ DPE      + E+++ RWAMLG  G + PE+  + G+
Sbjct: 64  PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 121

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>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +3

Query: 249 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 386
           P +L G  PGD+G+D  GL  DP      RE E+IH RWAML  LG
Sbjct: 73  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLG 118

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>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 27/46 (58%)
 Frame = +3

Query: 249 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 386
           P +L G  PGDYG+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 68  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113

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>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 46/128 (35%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
 Frame = +3

Query: 72  MAATTMALSSPAMKLAGASYVLGGGRITM---RXXXXXXXXXXXP--WYGPDRVLYLGPL 236
           MA   +  SS     A A+  + G RI+    R           P    G +R L+    
Sbjct: 1   MATQALISSSSISTSAEAARQIIGSRISQSVTRKASFVVRAASTPPVKQGANRQLWFA-- 58

Query: 237 SGEPPSYLSGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 398
           S +  SYL G  PGD+G+D  GLS DPE    F + + L   EVI+ R+AMLGA G + P
Sbjct: 59  SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAP 117

Query: 399 ELLARNGV 422
           E+L + G+
Sbjct: 118 EILGKAGL 125

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>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 52.0 bits (123), Expect = 6e-07
 Identities = 23/46 (50%), Positives = 27/46 (58%)
 Frame = +3

Query: 249 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 386
           P +L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 68  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113

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>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor|
           (LHCII type I CAB-1C) (LHCP) (Fragments)
          Length = 265

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 24/49 (48%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPW 200
           MAA TMALSSP     A+KL+  AS + G GRITMR           PW
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPW 49

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>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 208

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
 Frame = +3

Query: 225 LGPLSGEPPSYL-SGEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGALGCVFP 398
           + P +G+  S L  G  PGD G+D  GL+ +DP+ F   +E E+ H R AM+ A G +  
Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQ 191

Query: 399 ELLA 410
           E ++
Sbjct: 192 EAVS 195

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>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 36.2 bits (82), Expect = 0.033
 Identities = 29/96 (30%), Positives = 32/96 (33%), Gaps = 43/96 (44%)
 Frame = +3

Query: 249 PSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 335
           P YL G   GDYG+D  GL    E             AKN                    
Sbjct: 62  PEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPF 121

Query: 336 ------------RELEVIHCRWAMLGALGCVFPELL 407
                       RE E+IH RWAML  LG +  E L
Sbjct: 122 QPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWL 157



 Score = 33.9 bits (76), Expect = 0.16
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +3

Query: 216 VLYLGPLSGEPPSYLSGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 386
           VL +G +  +  + L  E   +PG   +D  GL++DP   A+ +  E+ H R AM+G LG
Sbjct: 193 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252

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>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 35.8 bits (81), Expect = 0.043
 Identities = 29/97 (29%), Positives = 33/97 (34%), Gaps = 43/97 (44%)
 Frame = +3

Query: 246 PPSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN------------------- 335
           PP +L G   GD G+D  GL    E             AKN                   
Sbjct: 65  PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124

Query: 336 -------------RELEVIHCRWAMLGALGCVFPELL 407
                        RE E+IH RWAMLG LG +  E L
Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEAL 161



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
 Frame = +3

Query: 216 VLYLGPLSGEPPSYLSGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 383
           VL +G +  +  S L  E   +PG Y +D  GL+ADPE     +  E+ H R AM+  L
Sbjct: 197 VLVVGYIEFQRNSELDPEKRIYPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254

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>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 35.8 bits (81), Expect = 0.043
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +3

Query: 216 VLYLGPLSGEPPSYLSGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 386
           VL +G +  +  + L  E   +PG   +D  GL+ADPE  A+ +  E+ H R AM+  LG
Sbjct: 196 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 34/110 (30%), Positives = 39/110 (35%), Gaps = 44/110 (40%)
 Frame = +3

Query: 210 DRVL-YLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN------ 335
           DR L Y G +S   P +L G   GDYG+D  GL    E             AKN      
Sbjct: 54  DRPLWYPGAIS---PDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVI 110

Query: 336 --------------------------RELEVIHCRWAMLGALGCVFPELL 407
                                     RE E+IH RWAML  LG +  E L
Sbjct: 111 GTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWL 160

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>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type I CAB-1A) (LHCP) (Fragments)
          Length = 265

 Score = 34.7 bits (78), Expect = 0.096
 Identities = 23/49 (46%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPW 200
           MAA  MALSSP     A+KL+  AS   G GRITMR           PW
Sbjct: 1   MAAAAMALSSPSFAGQAVKLSPSASENSGNGRITMRKAVAKSAPSSSPW 49

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>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 28/96 (29%), Positives = 32/96 (33%), Gaps = 45/96 (46%)
 Frame = +3

Query: 249 PSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 335
           P +L G  PGD G+D  GLS   E             AKN                    
Sbjct: 59  PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSEN 118

Query: 336 --------------RELEVIHCRWAMLGALGCVFPE 401
                         RE E+IH RWAML  LG +  E
Sbjct: 119 RLAPYSEVFGLARFRECELIHGRWAMLACLGALVAE 154

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>GDF6_MOUSE (P43028) Growth/differentiation factor 6 precursor (GDF-6)|
           (Growth/differentiation factor 16)
          Length = 454

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = -3

Query: 369 WPSGNGSPPAHGSWRRSPGQQR 304
           WP+ +GSP A GSW  SPG++R
Sbjct: 312 WPAPSGSPDA-GSWLPSPGRRR 332

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>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)|
          Length = 1206

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 22/76 (28%), Positives = 39/76 (51%)
 Frame = -2

Query: 424 LTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGNSPLR*LGG 245
           L P  +SSSG +  S P   Q+Q ++S++      S S+ + + ++  SP N+  R +GG
Sbjct: 233 LAPKSSSSSGGSN-STPQQQQQQLVSSNN------SSSSSNNSFTKASSPNNNGARSVGG 285

Query: 244 SPESGPR*STRSGPYH 197
           +  S    +T +   H
Sbjct: 286 AATSAATGTTAAAGSH 301

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>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor|
           (LHCII type I CAB-3A) (LHCP) (Fragments)
          Length = 267

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 6/36 (16%)
 Frame = +3

Query: 72  MAATTMALSSPA-----MKLA-GASYVLGGGRITMR 161
           MAA+TMALSS       +KLA  +S + G GRITMR
Sbjct: 1   MAASTMALSSSTFAGKTVKLAPSSSEITGNGRITMR 36

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>MUC13_MOUSE (P19467) Mucin-13 precursor (Cell surface antigen 114/A10)|
           (Lymphocyte antigen 64)
          Length = 573

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = -2

Query: 406 SSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGNS 266
           SSSG T P     +Q    +S +      SG A  P   Q  SPG+S
Sbjct: 27  SSSGGTSPPTTVQSQSPGSSSQASTTTSSSGGASPPTTVQSQSPGSS 73

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>GDF6_RAT (Q6HA10) Growth/differentiation factor 6 precursor (GDF-6)|
           (Growth/differentiation factor 16)
          Length = 452

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -3

Query: 369 WPSGNGSPPAHGSWRRSPGQQR 304
           WP+ +G+P A GSW  SPG++R
Sbjct: 310 WPAPSGAPDA-GSWLPSPGRRR 330

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>YMT1_YEAST (Q04212) Hypothetical oxidoreductase YMR041C (EC 1.-.-.-)|
          Length = 335

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFP----------GDYGWDTAGLSADPETFAKNREL 344
           P+YGP  VLY     G   S L  EFP          G  G +    S D   F+ +R  
Sbjct: 56  PYYGPSEVLY-----GRALSNLRNEFPRDTYFICTKVGRIGAEEFNYSRDFVRFSVHRSC 110

Query: 345 EVIHCRWAMLGALGCV----FPELL 407
           E +H  +  L  L  V    FP++L
Sbjct: 111 ERLHTTYLDLVYLHDVEFVKFPDIL 135

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>GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180

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>GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180

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>GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180

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>GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLLGTDGHPFGWPSDGFPGPQGLYYCGVGADK---AYRRDIMEAHYR 180

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>GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180

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>GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 29.3 bits (64), Expect = 4.0
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180

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>SCN5A_HUMAN (Q14524) Sodium channel protein type 5 alpha subunit (Sodium|
           channel protein type V alpha subunit) (Voltage-gated
           sodium channel alpha subunit Nav1.5) (Sodium channel
           protein, cardiac muscle alpha-subunit) (HH1)
          Length = 2016

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = -1

Query: 410 SEQLGEDAAERA--EHGPAAMDHLQLTVLGEGL-RVSREPR 297
           +E+ GED   ++  E GP AM+HL LT    GL R S +PR
Sbjct: 486 TEECGEDRLPKSDSEDGPRAMNHLSLT---RGLSRTSMKPR 523

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>S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (GEF) (Huntington|
           disease gene regulatory region-binding protein 1)
           (HDBP-1)
          Length = 387

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 246 PPSYLSGEFPGDYGWDTAGLSADPET 323
           P SY S    GD+GWD A   + P T
Sbjct: 145 PGSYSSSSNSGDWGWDLASDQSSPST 170

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>GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADR---AYGRDIVEAHYR 180

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>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast|
           precursor
          Length = 270

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +3

Query: 261 SGEFPGDYGWDTAGLSADPET--FAKNRELEVIHCRWAMLGALGCVFPELL 407
           SG F G   WD   L+A        + RE E+ H R AML ALG V  E L
Sbjct: 67  SGPFKGV--WDPLSLAATATVGDVRRWRESEITHGRVAMLAALGFVVGEQL 115

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>YAB9_YEAST (P31380) Hypothetical 128.5 kDa ATP-dependent helicase in ATS1-TPD3|
           intergenic region (EC 3.6.1.-)
          Length = 1131

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = -2

Query: 421 TPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGNSP 263
           +P + +SS   +P++P++      +  SRF  K S  +E    S+P  P  SP
Sbjct: 20  SPTKVASSSPLKPTSPTVPDASVASLRSRFTFKPSDPSEGAHTSKP-LPSGSP 71

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>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 373

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 129 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADR---AYGRDIVEAHYR 181

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>GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase)
          Length = 392

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSAD 314
           PW+G ++   L  ++G P  +    FPG  G    G+ AD
Sbjct: 129 PWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGAD 168

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>GLNA_SQUAC (P41320) Glutamine synthetase, mitochondrial precursor (EC 6.3.1.2)|
           (Glutamate--ammonia ligase)
          Length = 403

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 158 PWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGADK---AYGRDIVEAHYR 210

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>MRS2_ASPFU (Q4WCV3) Inner membrane magnesium transporter mrs2, mitochondrial|
           precursor (RNA-splicing protein mrs2)
          Length = 597

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -2

Query: 403 SSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP 284
           SS   +PSAPS    +++ S S FL+  S     P+ S+P
Sbjct: 3   SSSHLKPSAPSATLLRFLRSQSDFLSVNSSRCARPSRSKP 42

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>GLNA_CHICK (P16580) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 373

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 129 PWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGADK---AYGRDIVEAHYR 181


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,569,598
Number of Sequences: 219361
Number of extensions: 773013
Number of successful extensions: 2985
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 2828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2940
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2336739400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result