ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet10f01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY887063.1| Hordeum vulgare aerobic Mg-protoporphyrin IX mono... 230 2e-57
2gb|AY108897.1| Zea mays PCO080076 mRNA sequence 109 5e-21
3ref|NM_188121.1| Oryza sativa (japonica cultivar-group), Ozsa855... 94 3e-16
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 94 3e-16
5dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic D... 94 3e-16
6dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic D... 94 3e-16
7dbj|AK069333.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 3e-16
8dbj|AK059435.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 3e-16
9dbj|AK058287.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 3e-16
10gb|U37437.1|INU37437 Ipomoea nil PNIL34 mRNA, complete cds 66 7e-08
11gb|AY221168.2| Nicotiana tabacum ZIP mRNA, complete cds 60 4e-06
12gb|AF237671.1|AF237671 Chlamydomonas reinhardtii copper response... 60 4e-06
13gb|AF337038.2| Chlamydomonas reinhardtii copper target homolog 1... 52 0.001
14gb|AF337037.3| Chlamydomonas reinhardtii copper target homolog 1... 52 0.001
15gb|AF426027.2| Chlamydomonas reinhardtii copper target homolog 1... 52 0.001
16gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 48 0.017
17gb|AY912081.1| Uncultured proteobacterium DelRiverFos13D03 clone... 46 0.067
18gb|AE010360.1| Methanopyrus kandleri AV19 section 59 of 157 of t... 44 0.27
19gb|AF226628.1|AF226628 Chlamydomonas reinhardtii copper response... 44 0.27
20gb|AY322554.1| Salix babylonica putative fatty acid desaturase S... 42 1.0
21emb|BX569692.1| Synechococcus sp. WH8102 complete genome; segmen... 42 1.0
22ref|NM_115553.2| Arabidopsis thaliana AT103 (DICARBOXYLATE DIIRO... 40 4.1
23ref|XM_955921.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.1
24ref|XM_326984.1| Neurospora crassa OR74A hypothetical protein (N... 40 4.1
25ref|NM_182511.2| Homo sapiens cerebellin 2 precursor (CBLN2), mRNA 40 4.1
26gb|AY359074.1| Homo sapiens clone DNA81228 cerebellin-2 (UNQ1892... 40 4.1
27gb|BC110843.1| Homo sapiens cDNA clone IMAGE:5764156, containing... 40 4.1
28emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genom... 40 4.1
29emb|BX294020.1|NC7F4 Neurospora crassa DNA linkage group V Cosmi... 40 4.1
30emb|AL390921.1|ATT8M16 Arabidopsis thaliana DNA chromosome 3, BA... 40 4.1
31emb|AL138655.1|ATF24I3 Arabidopsis thaliana DNA chromosome 3, BA... 40 4.1
32gb|BC035789.1| Homo sapiens cerebellin 2 precursor, mRNA (cDNA c... 40 4.1
33gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 4.1
34dbj|AK125422.1| Homo sapiens cDNA FLJ43433 fis, clone OCBBF20278... 40 4.1
35gb|AF236101.1| Arabidopsis thaliana putative dicarboxylate diiro... 40 4.1
36gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 4.1
37gb|AC011208.5|AC011208 Homo sapiens chromosome 18, clone RP11-13... 40 4.1
38emb|BX829920.1|CNS0A1DU Arabidopsis thaliana Full-length cDNA Co... 40 4.1
39emb|BX831324.1|CNS0A0NQ Arabidopsis thaliana Full-length cDNA Co... 40 4.1
40emb|AJ332530.1|HSA332530 Homo sapiens genomic sequence surroundi... 40 4.1
41emb|AL079343.4|CNS00M8T Human chromosome 14 DNA sequence BAC R-4... 40 4.1
42gb|U38232.1|ATU38232 Arabidopsis thaliana AT103 mRNA, complete cds 40 4.1 
>gb|AY887063.1| Hordeum vulgare aerobic Mg-protoporphyrin IX monomethyl ester
           cyclase (Xantha-l) gene, complete cds
          Length = 2097

 Score =  230 bits (116), Expect = 2e-57
 Identities = 118/119 (99%)
 Strand = Plus / Plus

                                                                       
Query: 42  cctcggaagatggcgtccgccatggagctctccctcctcaaccccgcaatgcaccactac 101
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cctcggaagatggcgtccgccatggagctctccctcctcaaccccgcaatgcaccactac 60

                                                                      
Query: 102 ggcatcgccgccaaaacggcctcccacctcccggntgtccccgcacgccgggcctcttc 160
           |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 61  ggcatcgccgccaaaacggcctcccacctcccggttgtccccgcacgccgggcctcttc 119



 Score =  192 bits (97), Expect = 5e-46
 Identities = 97/97 (100%)
 Strand = Plus / Plus

                                                                       
Query: 219 aagcccggctcaccgaagaagcggggcaagacggaggtcaacgagtctctgctcacgccg 278
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 178 aagcccggctcaccgaagaagcggggcaagacggaggtcaacgagtctctgctcacgccg 237

                                                
Query: 279 cggttctacaccacggacttcgacgagatggagcagc 315
           |||||||||||||||||||||||||||||||||||||
Sbjct: 238 cggttctacaccacggacttcgacgagatggagcagc 274
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>gb|AY108897.1| Zea mays PCO080076 mRNA sequence
          Length = 1774

 Score =  109 bits (55), Expect = 5e-21
 Identities = 73/79 (92%)
 Strand = Plus / Plus

                                                                       
Query: 234 aagaagcggggcaagacggaggtcaacgagtctctgctcacgccgcggttctacaccacg 293
           ||||||||||||||||||||| || | ||| | ||||||||||| |||||||||||||||
Sbjct: 196 aagaagcggggcaagacggagatccaggagacgctgctcacgccccggttctacaccacg 255

                              
Query: 294 gacttcgacgagatggagc 312
           |||||||||||||||||||
Sbjct: 256 gacttcgacgagatggagc 274



 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 36/38 (94%)
 Strand = Plus / Plus

                                                
Query: 51 atggcgtccgccatggagctctccctcctcaaccccgc 88
          ||||| ||||||||||||||||| ||||||||||||||
Sbjct: 40 atggcctccgccatggagctctcgctcctcaaccccgc 77
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>ref|NM_188121.1| Oryza sativa (japonica cultivar-group), Ozsa8553 predicted mRNA
          Length = 1227

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                       
Query: 234 aagaagcggggcaagacggaggtcaacgagtctctgctcacgccgcggttctacaccacg 293
           |||||||| || ||||||||| || | ||| | ||||| |||||||||||||||||||||
Sbjct: 157 aagaagcgcgggaagacggagatccaggagacgctgctgacgccgcggttctacaccacg 216

                              
Query: 294 gacttcgacgagatggagc 312
           |||||||||||||||||||
Sbjct: 217 gacttcgacgagatggagc 235



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 57 tccgccatggagctctccctcctcaaccc 85
          |||||||||||||||||||||||||||||
Sbjct: 10 tccgccatggagctctccctcctcaaccc 38
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                           
Query: 234     aagaagcggggcaagacggaggtcaacgagtctctgctcacgccgcggttctacaccacg 293
               |||||||| || ||||||||| || | ||| | ||||| |||||||||||||||||||||
Sbjct: 9873555 aagaagcgcgggaagacggagatccaggagacgctgctgacgccgcggttctacaccacg 9873614

                                  
Query: 294     gacttcgacgagatggagc 312
               |||||||||||||||||||
Sbjct: 9873615 gacttcgacgagatggagc 9873633



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                            
Query: 57      tccgccatggagctctccctcctcaaccc 85
               |||||||||||||||||||||||||||||
Sbjct: 9873408 tccgccatggagctctccctcctcaaccc 9873436
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>dbj|AP001072.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0025D05
          Length = 145684

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                          
Query: 234    aagaagcggggcaagacggaggtcaacgagtctctgctcacgccgcggttctacaccacg 293
              |||||||| || ||||||||| || | ||| | ||||| |||||||||||||||||||||
Sbjct: 137805 aagaagcgcgggaagacggagatccaggagacgctgctgacgccgcggttctacaccacg 137864

                                 
Query: 294    gacttcgacgagatggagc 312
              |||||||||||||||||||
Sbjct: 137865 gacttcgacgagatggagc 137883



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                           
Query: 57     tccgccatggagctctccctcctcaaccc 85
              |||||||||||||||||||||||||||||
Sbjct: 137658 tccgccatggagctctccctcctcaaccc 137686
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>dbj|AP000815.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
            clone:P0003H10
          Length = 142418

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                        
Query: 234  aagaagcggggcaagacggaggtcaacgagtctctgctcacgccgcggttctacaccacg 293
            |||||||| || ||||||||| || | ||| | ||||| |||||||||||||||||||||
Sbjct: 9321 aagaagcgcgggaagacggagatccaggagacgctgctgacgccgcggttctacaccacg 9380

                               
Query: 294  gacttcgacgagatggagc 312
            |||||||||||||||||||
Sbjct: 9381 gacttcgacgagatggagc 9399



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                         
Query: 57   tccgccatggagctctccctcctcaaccc 85
            |||||||||||||||||||||||||||||
Sbjct: 9174 tccgccatggagctctccctcctcaaccc 9202
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>dbj|AK069333.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014B03, full
           insert sequence
          Length = 1691

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                       
Query: 234 aagaagcggggcaagacggaggtcaacgagtctctgctcacgccgcggttctacaccacg 293
           |||||||| || ||||||||| || | ||| | ||||| |||||||||||||||||||||
Sbjct: 205 aagaagcgcgggaagacggagatccaggagacgctgctgacgccgcggttctacaccacg 264

                              
Query: 294 gacttcgacgagatggagc 312
           |||||||||||||||||||
Sbjct: 265 gacttcgacgagatggagc 283



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 57 tccgccatggagctctccctcctcaaccc 85
          |||||||||||||||||||||||||||||
Sbjct: 58 tccgccatggagctctccctcctcaaccc 86
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>dbj|AK059435.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-F10, full
           insert sequence
          Length = 1944

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                       
Query: 234 aagaagcggggcaagacggaggtcaacgagtctctgctcacgccgcggttctacaccacg 293
           |||||||| || ||||||||| || | ||| | ||||| |||||||||||||||||||||
Sbjct: 195 aagaagcgcgggaagacggagatccaggagacgctgctgacgccgcggttctacaccacg 254

                              
Query: 294 gacttcgacgagatggagc 312
           |||||||||||||||||||
Sbjct: 255 gacttcgacgagatggagc 273



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 57 tccgccatggagctctccctcctcaaccc 85
          |||||||||||||||||||||||||||||
Sbjct: 48 tccgccatggagctctccctcctcaaccc 76
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>dbj|AK058287.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E02, full
           insert sequence
          Length = 1533

 Score = 93.7 bits (47), Expect = 3e-16
 Identities = 71/79 (89%)
 Strand = Plus / Plus

                                                                       
Query: 234 aagaagcggggcaagacggaggtcaacgagtctctgctcacgccgcggttctacaccacg 293
           |||||||| || ||||||||| || | ||| | ||||| |||||||||||||||||||||
Sbjct: 191 aagaagcgcgggaagacggagatccaggagacgctgctgacgccgcggttctacaccacg 250

                              
Query: 294 gacttcgacgagatggagc 312
           |||||||||||||||||||
Sbjct: 251 gacttcgacgagatggagc 269



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                       
Query: 57 tccgccatggagctctccctcctcaaccc 85
          |||||||||||||||||||||||||||||
Sbjct: 44 tccgccatggagctctccctcctcaaccc 72
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>gb|U37437.1|INU37437 Ipomoea nil PNIL34 mRNA, complete cds
          Length = 1403

 Score = 65.9 bits (33), Expect = 7e-08
 Identities = 42/45 (93%)
 Strand = Plus / Plus

                                                        
Query: 267 ctgctcacgccgcggttctacaccacggacttcgacgagatggag 311
           ||||| |||||| |||||||||| |||||||||||||||||||||
Sbjct: 195 ctgctgacgccgaggttctacacgacggacttcgacgagatggag 239
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>gb|AY221168.2| Nicotiana tabacum ZIP mRNA, complete cds
          Length = 1323

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                     
Query: 267 ctgctcacgccgcggttctacaccacggacttcgacgagatg 308
           ||||| |||||| |||||||||| ||||||||||||||||||
Sbjct: 89  ctgctgacgccgaggttctacacgacggacttcgacgagatg 130
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>gb|AF237671.1|AF237671 Chlamydomonas reinhardtii copper response defect 1 protein (Crd1)
           mRNA, complete cds
          Length = 2176

 Score = 60.0 bits (30), Expect = 4e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 282 ttctacaccacggacttcgacgagatggagcagc 315
           ||||||||||| ||||||||||||||||||||||
Sbjct: 358 ttctacaccaccgacttcgacgagatggagcagc 391
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>gb|AF337038.2| Chlamydomonas reinhardtii copper target homolog 1 protein (CTH1)
            gene, complete cds; nuclear gene for chloroplast product
          Length = 5249

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                          
Query: 267  ctgctcacgccgcggttctacaccacggacttcgacgagatggagc 312
            |||||||| || || ||||||||||| |||||||| ||||||||||
Sbjct: 2319 ctgctcactcctcgcttctacaccaccgacttcgatgagatggagc 2364
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>gb|AF337037.3| Chlamydomonas reinhardtii copper target homolog 1 protein (CTH1)
           mRNA, complete cds; nuclear gene for chloroplast
           product, alternatively spliced
          Length = 2149

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 267 ctgctcacgccgcggttctacaccacggacttcgacgagatggagc 312
           |||||||| || || ||||||||||| |||||||| ||||||||||
Sbjct: 281 ctgctcactcctcgcttctacaccaccgacttcgatgagatggagc 326
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>gb|AF426027.2| Chlamydomonas reinhardtii copper target homolog 1 protein (CTH1)
            mRNA, partial cds; nuclear gene for chloroplast product,
            alternatively spliced
          Length = 3096

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                          
Query: 267  ctgctcacgccgcggttctacaccacggacttcgacgagatggagc 312
            |||||||| || || ||||||||||| |||||||| ||||||||||
Sbjct: 1245 ctgctcactcctcgcttctacaccaccgacttcgatgagatggagc 1290
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 48.1 bits (24), Expect = 0.017
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 270     ctcacgccgcggttctacaccacggact 297
               ||||||||||||||||||||||| ||||
Sbjct: 4536828 ctcacgccgcggttctacaccaccgact 4536801
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>gb|AY912081.1| Uncultured proteobacterium DelRiverFos13D03 clone DelRiverFos13D03,
             complete sequence
          Length = 34908

 Score = 46.1 bits (23), Expect = 0.067
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 276   ccgcggttctacaccacggacttcgacgagatgga 310
             ||||| || |||||||| |||||||||||||||||
Sbjct: 13251 ccgcgcttttacaccaccgacttcgacgagatgga 13285
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>gb|AE010360.1| Methanopyrus kandleri AV19 section 59 of 157 of the complete genome
          Length = 12845

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 293   ggacttcgacgagatggagcag 314
             ||||||||||||||||||||||
Sbjct: 10414 ggacttcgacgagatggagcag 10393
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>gb|AF226628.1|AF226628 Chlamydomonas reinhardtii copper response target 1 protein (CRD1)
            gene, complete cds; nuclear gene for chloroplast product
          Length = 4205

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 294  gacttcgacgagatggagcagc 315
            ||||||||||||||||||||||
Sbjct: 1519 gacttcgacgagatggagcagc 1540
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>gb|AY322554.1| Salix babylonica putative fatty acid desaturase SBZIP mRNA, partial
           cds
          Length = 999

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 291 acggacttcgacgagatggagcagc 315
           ||||||||||| |||||||||||||
Sbjct: 1   acggacttcgaggagatggagcagc 25
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>emb|BX569692.1| Synechococcus sp. WH8102 complete genome; segment 4/7
          Length = 345997

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 270    ctcacgccgcggttctacaccacggactt 298
              ||||| |||||||| ||||||||||||||
Sbjct: 144320 ctcacaccgcggttttacaccacggactt 144292
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>ref|NM_115553.2| Arabidopsis thaliana AT103 (DICARBOXYLATE DIIRON 1) AT3G56940
           (AT103) mRNA, complete cds
          Length = 1602

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 280 ggttctacaccacggacttcgacgagatggagcagc 315
           |||||||||| ||||||||||| || ||||| ||||
Sbjct: 255 ggttctacacgacggacttcgaggaaatggaacagc 290
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>ref|XM_955921.1| Neurospora crassa OR74A hypothetical protein (NCU06699.1) partial
           mRNA
          Length = 1500

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 47  gaagatggcgtccgccatgg 66
           ||||||||||||||||||||
Sbjct: 732 gaagatggcgtccgccatgg 713
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>ref|XM_326984.1| Neurospora crassa OR74A hypothetical protein (NCU06699.1) partial
           mRNA
          Length = 1500

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 47  gaagatggcgtccgccatgg 66
           ||||||||||||||||||||
Sbjct: 732 gaagatggcgtccgccatgg 713
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>ref|NM_182511.2| Homo sapiens cerebellin 2 precursor (CBLN2), mRNA
          Length = 2750

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 67   agctctccctcctcaacccc 86
            ||||||||||||||||||||
Sbjct: 1913 agctctccctcctcaacccc 1932
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>gb|AY359074.1| Homo sapiens clone DNA81228 cerebellin-2 (UNQ1892) mRNA, complete cds
          Length = 2750

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 67   agctctccctcctcaacccc 86
            ||||||||||||||||||||
Sbjct: 1913 agctctccctcctcaacccc 1932
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>gb|BC110843.1| Homo sapiens cDNA clone IMAGE:5764156, containing frame-shift errors
          Length = 2418

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 67   agctctccctcctcaacccc 86
            ||||||||||||||||||||
Sbjct: 1557 agctctccctcctcaacccc 1576
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>emb|BX572597.1| Rhodopseudomonas palustris CGA009 complete genome; segment 5/16
          Length = 349737

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    acgccgcggttctacaccac 292
              ||||||||||||||||||||
Sbjct: 325753 acgccgcggttctacaccac 325772
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>emb|BX294020.1|NC7F4 Neurospora crassa DNA linkage group V Cosmid contig 7F4
          Length = 115416

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 47    gaagatggcgtccgccatgg 66
             ||||||||||||||||||||
Sbjct: 69608 gaagatggcgtccgccatgg 69627
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>emb|AL390921.1|ATT8M16 Arabidopsis thaliana DNA chromosome 3, BAC clone T8M16
          Length = 107271

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 280   ggttctacaccacggacttcgacgagatggagcagc 315
             |||||||||| ||||||||||| || ||||| ||||
Sbjct: 92722 ggttctacacgacggacttcgaggaaatggaacagc 92757
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>emb|AL138655.1|ATF24I3 Arabidopsis thaliana DNA chromosome 3, BAC clone F24I3
          Length = 91303

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 280  ggttctacaccacggacttcgacgagatggagcagc 315
            |||||||||| ||||||||||| || ||||| ||||
Sbjct: 4809 ggttctacacgacggacttcgaggaaatggaacagc 4844
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>gb|BC035789.1| Homo sapiens cerebellin 2 precursor, mRNA (cDNA clone MGC:46273
            IMAGE:5727802), complete cds
          Length = 2423

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 67   agctctccctcctcaacccc 86
            ||||||||||||||||||||
Sbjct: 1575 agctctccctcctcaacccc 1594
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 273     acgccgcggttctacaccac 292
               ||||||||||||||||||||
Sbjct: 1439066 acgccgcggttctacaccac 1439085
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>dbj|AK125422.1| Homo sapiens cDNA FLJ43433 fis, clone OCBBF2027868, highly  similar
            to CERL_RAT Cerebellin-like glycoprotein
          Length = 3336

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 67   agctctccctcctcaacccc 86
            ||||||||||||||||||||
Sbjct: 2519 agctctccctcctcaacccc 2538
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>gb|AF236101.1| Arabidopsis thaliana putative dicarboxylate diiron protein (Crd1)
           mRNA, complete cds
          Length = 1407

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 280 ggttctacaccacggacttcgacgagatggagcagc 315
           |||||||||| ||||||||||| || ||||| ||||
Sbjct: 245 ggttctacacgacggacttcgaggaaatggaacagc 280
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                          
Query: 267    ctgctcacgccgcggttctacaccacggacttcgacgagatgga 310
              ||||| || ||||| ||||||||||| || ||||| ||||||||
Sbjct: 142810 ctgctgaccccgcgcttctacaccaccgatttcgatgagatgga 142767
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>gb|AC011208.5|AC011208 Homo sapiens chromosome 18, clone RP11-131K21, complete sequence
          Length = 181602

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    agctctccctcctcaacccc 86
             ||||||||||||||||||||
Sbjct: 93426 agctctccctcctcaacccc 93445
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>emb|BX829920.1|CNS0A1DU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB46ZB02 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1683

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   ggaagatggcgtccgccatg 65
            ||||||||||||||||||||
Sbjct: 1402 ggaagatggcgtccgccatg 1421
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>emb|BX831324.1|CNS0A0NQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS78ZE12 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1705

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   ggaagatggcgtccgccatg 65
            ||||||||||||||||||||
Sbjct: 1405 ggaagatggcgtccgccatg 1424
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>emb|AJ332530.1|HSA332530 Homo sapiens genomic sequence surrounding NotI site, clone NR5-KO6R
          Length = 860

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 68  gctctccctcctcaaccccg 87
           ||||||||||||||||||||
Sbjct: 216 gctctccctcctcaaccccg 197
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>emb|AL079343.4|CNS00M8T Human chromosome 14 DNA sequence BAC R-483C6 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 173480

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 67     agctctccctcctcaacccc 86
              ||||||||||||||||||||
Sbjct: 140223 agctctccctcctcaacccc 140204
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>gb|U38232.1|ATU38232 Arabidopsis thaliana AT103 mRNA, complete cds
          Length = 1349

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 280 ggttctacaccacggacttcgacgagatggagcagc 315
           |||||||||| ||||||||||| || ||||| ||||
Sbjct: 221 ggttctacacgacggacttcgaggaaatggaacagc 256


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,464,546
Number of Sequences: 3902068
Number of extensions: 1464546
Number of successful extensions: 22162
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 22013
Number of HSP's gapped (non-prelim): 149
length of query: 315
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 293
effective length of database: 17,147,199,772
effective search space: 5024129533196
effective search space used: 5024129533196
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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