| Clone Name | baet10e12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SEM11_ARATH (Q9XIR8) Probable 26 proteasome complex subunit sem1-1 | 32 | 0.76 | 2 | CT059_HUMAN (Q9BYT1) Putative transporter C20orf59 | 30 | 2.2 | 3 | SEM12_ARATH (Q9FL96) Probable 26 proteasome complex subunit sem1-2 | 30 | 3.8 |
|---|
>SEM11_ARATH (Q9XIR8) Probable 26 proteasome complex subunit sem1-1| Length = 74 Score = 32.0 bits (71), Expect = 0.76 Identities = 17/34 (50%), Positives = 18/34 (52%) Frame = +2 Query: 203 KEEGNEAVQQWEXXXXXXXXXXXFSLQLRKELES 304 KEE E QQWE FS QLRKELE+ Sbjct: 36 KEEVKEVSQQWEDDWDDDDVNDDFSRQLRKELEN 69
>CT059_HUMAN (Q9BYT1) Putative transporter C20orf59| Length = 436 Score = 30.4 bits (67), Expect = 2.2 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = +2 Query: 329 WSCIQYFQIGSGICWIWHVYCYI 397 W I YF G + W+W+VY Y+ Sbjct: 183 WQSIFYFSGGLTLLWVWYVYRYL 205
>SEM12_ARATH (Q9FL96) Probable 26 proteasome complex subunit sem1-2| Length = 73 Score = 29.6 bits (65), Expect = 3.8 Identities = 16/38 (42%), Positives = 18/38 (47%) Frame = +2 Query: 203 KEEGNEAVQQWEXXXXXXXXXXXFSLQLRKELESIPSK 316 KEE E QWE FS QL+KELE+ K Sbjct: 35 KEEVKEVSLQWEDDWDDDDVSDDFSRQLKKELENASEK 72 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,580,708 Number of Sequences: 219361 Number of extensions: 545496 Number of successful extensions: 1616 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1588 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1616 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)