| Clone Name | baet10e04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY110012.1| Zea mays CL907_1 mRNA sequence Length = 2928 Score = 81.8 bits (41), Expect = 1e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 108 ccgctggcgatcgagcttagctcgccgcacccggaggatgagcgcctcggtgccaccagc 167 ||||||||||||||||| |||||||||||||||||| | |||| ||||| || |||| Sbjct: 1531 ccgctggcgatcgagctcagctcgccgcacccggagaaggagcagctcggcgcggtcagc 1590 Query: 168 acggtgtacactccgccggac 188 |||||||||||||| |||||| Sbjct: 1591 acggtgtacactccaccggac 1611
>gb|L35931.1|BLYLOXA Barley lipoxygenase 1 (LoxA) gene, complete cds Length = 2818 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Plus Query: 227 ggtgtgggagctcgccaaggcc 248 |||||||||||||||||||||| Sbjct: 1553 ggtgtgggagctcgccaaggcc 1574
>ref|XM_312216.2| Anopheles gambiae str. PEST ENSANGP00000010751 (ENSANGG00000008262), partial mRNA Length = 2298 Score = 42.1 bits (21), Expect = 0.87 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 cggtgccaccagcacggtgta 175 ||||||||||||||||||||| Sbjct: 2064 cggtgccaccagcacggtgta 2044
>ref|XM_462649.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2700 Score = 40.1 bits (20), Expect = 3.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 229 tgtgggagctcgccaaggcccacgcctcctccaacg 264 ||||| ||||||||||||| |||| || |||||||| Sbjct: 1613 tgtggcagctcgccaaggcacacgtctgctccaacg 1648
>ref|XM_516762.1| PREDICTED: Pan troglodytes transferrin (LOC460710), mRNA Length = 3633 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cgccgcacccggaggatgag 149 |||||||||||||||||||| Sbjct: 1102 cgccgcacccggaggatgag 1121
>gb|DQ525716.1| Homo sapiens transferrin (TF) gene, complete cds Length = 33191 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cgccgcacccggaggatgag 149 |||||||||||||||||||| Sbjct: 262 cgccgcacccggaggatgag 281
>gb|AY308797.1| Homo sapiens transferrin (TF) gene, complete cds Length = 37308 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cgccgcacccggaggatgag 149 |||||||||||||||||||| Sbjct: 2433 cgccgcacccggaggatgag 2452
>emb|AJ966349.1| Hordeum vulgare subsp. vulgare mRNA for lipoxygenase-like protein (lox gene) Length = 3123 Score = 40.1 bits (20), Expect = 3.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 229 tgtgggagctcgccaaggcccacgcctcctccaacg 264 ||||| |||||||||||||||| | || |||||||| Sbjct: 1813 tgtggcagctcgccaaggcccatgtctgctccaacg 1848
>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome Length = 1995281 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 cgaactcaaagccggcgccg 207 |||||||||||||||||||| Sbjct: 222881 cgaactcaaagccggcgccg 222862
>gb|BC059367.1| Homo sapiens transferrin, mRNA (cDNA clone MGC:71545 IMAGE:5264299), complete cds Length = 2330 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cgccgcacccggaggatgag 149 |||||||||||||||||||| Sbjct: 32 cgccgcacccggaggatgag 51
>gb|BC045772.1| Homo sapiens transferrin, mRNA (cDNA clone IMAGE:5265104), containing frame-shift errors Length = 806 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cgccgcacccggaggatgag 149 |||||||||||||||||||| Sbjct: 174 cgccgcacccggaggatgag 193
>emb|CR859370.1| Pongo pygmaeus mRNA; cDNA DKFZp459H0229 (from clone DKFZp459H0229) Length = 2392 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cgccgcacccggaggatgag 149 |||||||||||||||||||| Sbjct: 100 cgccgcacccggaggatgag 119
>gb|DQ397851.1| Cenarchaeum symbiosum clone C13G08, complete sequence Length = 38845 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 tcaaagccggcgccgacgcc 212 |||||||||||||||||||| Sbjct: 20988 tcaaagccggcgccgacgcc 21007
>dbj|AB169522.1| Macaca fascicularis brain cDNA, clone: QccE-13766, similar to human transferrin (TF), mRNA, RefSeq: NM_001063.2 Length = 2344 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cgccgcacccggaggatgag 149 |||||||||||||||||||| Sbjct: 55 cgccgcacccggaggatgag 74
>gb|S95936.1| transferrin [human, liver, mRNA, 2347 nt] Length = 2347 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cgccgcacccggaggatgag 149 |||||||||||||||||||| Sbjct: 65 cgccgcacccggaggatgag 84 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 cgccgcacccggaggatgag 149 |||||||||||||||||||| Sbjct: 29 cgccgcacccggaggatgag 10
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 3.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 229 tgtgggagctcgccaaggcccacgcctcctccaacg 264 ||||| ||||||||||||| |||| || |||||||| Sbjct: 22282451 tgtggcagctcgccaaggcacacgtctgctccaacg 22282486
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 gtgggagctcgccaaggccc 249 |||||||||||||||||||| Sbjct: 22996583 gtgggagctcgccaaggccc 22996602
>dbj|AK222755.1| Homo sapiens mRNA for transferrin variant, clone: HEP00268 Length = 2328 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 cgccgcacccggaggatgag 149 |||||||||||||||||||| Sbjct: 34 cgccgcacccggaggatgag 53
>dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1067_B01 Length = 100525 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 gtgggagctcgccaaggccc 249 |||||||||||||||||||| Sbjct: 20980 gtgggagctcgccaaggccc 20999
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 ccggcgccgacgcctccgac 218 |||||||||||||||||||| Sbjct: 5721861 ccggcgccgacgcctccgac 5721880
>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0016G10 Length = 143211 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 gtgggagctcgccaaggccc 249 |||||||||||||||||||| Sbjct: 116385 gtgggagctcgccaaggccc 116404
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 40.1 bits (20), Expect = 3.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 229 tgtgggagctcgccaaggcccacgcctcctccaacg 264 ||||| ||||||||||||| |||| || |||||||| Sbjct: 33353 tgtggcagctcgccaaggcacacgtctgctccaacg 33388 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,595,312 Number of Sequences: 3902068 Number of extensions: 1595312 Number of successful extensions: 29869 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 29773 Number of HSP's gapped (non-prelim): 95 length of query: 264 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 242 effective length of database: 17,147,199,772 effective search space: 4149622344824 effective search space used: 4149622344824 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)