ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet10d04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, comple... 268 6e-69
2emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clo... 212 3e-52
3emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clo... 202 3e-49
4gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, comple... 161 9e-37
5gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete ... 137 1e-29
6gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete ... 137 1e-29
7gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete ... 137 1e-29
8emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin 100 3e-18
9dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds 90 3e-15
10dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds 84 2e-13
11emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clo... 82 7e-13
12dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, compl... 72 7e-10
13dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, compl... 64 2e-07
14emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene 44 0.15
15emb|BX324159.6| Zebrafish DNA sequence from clone CH211-10O1 in ... 42 0.59
16ref|NM_019741.2| Mus musculus solute carrier family 2 (facilitat... 40 2.3
17gb|BC023500.1| Mus musculus solute carrier family 2 (facilitated... 40 2.3
18dbj|AK029720.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 2.3
19emb|AL606971.22| Mouse DNA sequence from clone RP23-123I20 on ch... 40 2.3
20gb|AF161071.1|AF161071 Mus musculus fructose transporter GLUT5 m... 40 2.3
21ref|NM_117425.2| Arabidopsis thaliana AMT1 (AMMONIUM TRANSPORT 1... 38 9.2
22gb|AC121851.4| Mus musculus chromosome 8 clone RP24-92F5, comple... 38 9.2
23gb|AC114613.12| Mus musculus chromosome 5, clone RP24-80F7, comp... 38 9.2
24gb|AC091472.2| Mus musculus chromosome X clones RP21-90B15, RP21... 38 9.2
25ref|XM_416804.1| PREDICTED: Gallus gallus similar to ribosomal p... 38 9.2
26ref|NG_005425.2| Homo sapiens PHF5A pseudogene 6 (LOC450250) on ... 38 9.2
27gb|AC149571.3| Rhinolophus ferrumequinum clone VMRC7-305L23, com... 38 9.2
28gb|AC124434.3| Mus musculus BAC clone RP24-250K22 from chromosom... 38 9.2
29gb|AC147964.10| Medicago truncatula clone mth2-5i18, complete se... 38 9.2
30emb|AL445648.18| Human DNA sequence from clone RP11-373M8 on chr... 38 9.2
31gb|AE014819.1| Plasmodium falciparum 3D7 chromosome 14 section 4... 38 9.2
32gb|AC015712.10| Homo sapiens chromosome 15, clone RP11-66B24, co... 38 9.2
33emb|AL161536.2|ATCHRIV36 Arabidopsis thaliana DNA chromosome 4, ... 38 9.2
34emb|AL049656.1|ATT6G15 Arabidopsis thaliana DNA chromosome 4, BA... 38 9.2
35emb|CR762497.17| Zebrafish DNA sequence from clone DKEY-162B3 in... 38 9.2
36emb|CR352516.1| Gallus gallus finished cDNA, clone ChEST837n1 38 9.2
37gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold 38 9.2
38emb|X75879.1|ATAMT1 A.thaliana amt1 mRNA 38 9.2
39emb|CT573036.11| Mouse DNA sequence from clone RP24-376I11 on ch... 38 9.2
40emb|BX649231.4| Zebrafish DNA sequence from clone DKEY-225H23 in... 38 9.2
41gb|AC090052.15| Homo sapiens 12 BAC RP11-295G12 (Roswell Park Ca... 38 9.2
42emb|BX248124.7| Zebrafish DNA sequence from clone CH211-214E3 in... 38 9.2
43gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome 38 9.2
44emb|AL672297.7| Mouse DNA sequence from clone RP23-137E3 on chro... 38 9.2
45emb|AL672055.8| Mouse DNA sequence from clone RP23-339K2 on chro... 38 9.2
46emb|AL672002.14| Mouse DNA sequence from clone RP23-252M19 on ch... 38 9.2

>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds
          Length = 2406

 Score =  268 bits (135), Expect = 6e-69
 Identities = 174/187 (93%)
 Strand = Plus / Plus

                                                                        
Query: 1    atcaatccaacgtagccatttctcattcttctggagaaattaaagccaacaagccaacca 60
            ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1472 atcaatccaacatagccatttctcattcttctggagaaattaaagccaagaagccaacca 1531

                                                                        
Query: 61   tggcacccagtaagagtattaagggtgtggtcatttgtgttctcatactaggtttagttc 120
            |||||||||| |||||||||||| ||||||||||||||||||||||||| | ||||||||
Sbjct: 1532 tggcacccagcaagagtattaagagtgtggtcatttgtgttctcatactggttttagttc 1591

                                                                        
Query: 121  tggagcaggtccagatggagggaaagagttgctgcaagaccacgtttgccagaaactgtt 180
            |||||||||||||| |||||||||| ||||||||||||  |||||| || |||||||| |
Sbjct: 1592 tggagcaggtccaggtggagggaaaaagttgctgcaaggacacgttagctagaaactgct 1651

                   
Query: 181  acaacac 187
            |||||||
Sbjct: 1652 acaacac 1658



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>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4)
          Length = 658

 Score =  212 bits (107), Expect = 3e-52
 Identities = 140/151 (92%)
 Strand = Plus / Plus

                                                                       
Query: 37  aaattaaagccaacaagccaaccatggcacccagtaagagtattaagggtgtggtcattt 96
           ||||||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 3   aaattaaagccaagaagccaaccatggcacccagcaagagtattaagagtgtggtcattt 62

                                                                       
Query: 97  gtgttctcatactaggtttagttctggagcaggtccagatggagggaaagagttgctgca 156
           ||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct: 63  gtgttctcatactgggtttagttctggagcaggtccaggtggagggaaaaagttgctgca 122

                                          
Query: 157 agaccacgtttgccagaaactgttacaacac 187
           ||  |||||| || |||||||| ||||||||
Sbjct: 123 aggacacgttagctagaaactgctacaacac 153



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>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4)
          Length = 637

 Score =  202 bits (102), Expect = 3e-49
 Identities = 135/146 (92%)
 Strand = Plus / Plus

                                                                       
Query: 42  aaagccaacaagccaaccatggcacccagtaagagtattaagggtgtggtcatttgtgtt 101
           |||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 1   aaagccaagaagccaaccatggcacccagcaagagtattaagagtgtggtcatttgtgtt 60

                                                                       
Query: 102 ctcatactaggtttagttctggagcaggtccagatggagggaaagagttgctgcaagacc 161
           |||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||  |
Sbjct: 61  ctcatactgggtttagttctggagcaggtccaggtggagggaaaaagttgctgcaaggac 120

                                     
Query: 162 acgtttgccagaaactgttacaacac 187
           ||||| || |||||||| ||||||||
Sbjct: 121 acgttagctagaaactgctacaacac 146



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>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds
          Length = 2259

 Score =  161 bits (81), Expect = 9e-37
 Identities = 159/185 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1    atcaatccaacgtagccatttctcattcttctggagaaattaaagccaacaagccaacca 60
            |||||||||||||| |||| ||||||||| |  |||||||||| |||||| |||||||||
Sbjct: 1493 atcaatccaacgtaaccatatctcattctacatgagaaattaaggccaaccagccaacca 1552

                                                                        
Query: 61   tggcacccagtaagagtattaagggtgtggtcatttgtgttctcatactaggtttagttc 120
            ||||| |||  |||||||||||| | ||||| ||||||||||||||| | ||||||||||
Sbjct: 1553 tggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagttc 1612

                                                                        
Query: 121  tggagcaggtccagatggagggaaagagttgctgcaagaccacgtttgccagaaactgtt 180
            |||||||||||||  | || || |||||||||||||||| ||||   | ||||||||| |
Sbjct: 1613 tggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgct 1672

                 
Query: 181  acaac 185
            |||||
Sbjct: 1673 acaac 1677



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>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940
          Length = 663

 Score =  137 bits (69), Expect = 1e-29
 Identities = 141/165 (85%)
 Strand = Plus / Plus

                                                                       
Query: 21  tctcattcttctggagaaattaaagccaacaagccaaccatggcacccagtaagagtatt 80
           ||||||||| || |||||||||| |||||| |||||||||||||| |||  |||||||||
Sbjct: 5   tctcattctacttgagaaattaaggccaaccagccaaccatggcaaccaacaagagtatt 64

                                                                       
Query: 81  aagggtgtggtcatttgtgttctcatactaggtttagttctggagcaggtccagatggag 140
           ||| | ||||| ||||||||||||||| | |||||||||||||||||||||||  | || 
Sbjct: 65  aagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaa 124

                                                        
Query: 141 ggaaagagttgctgcaagaccacgtttgccagaaactgttacaac 185
           |  |||||||||||||||| ||||   | ||||||||| ||||||
Sbjct: 125 gccaagagttgctgcaagaacacgacgggcagaaactgctacaac 169



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>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348
          Length = 608

 Score =  137 bits (69), Expect = 1e-29
 Identities = 141/165 (85%)
 Strand = Plus / Plus

                                                                       
Query: 21  tctcattcttctggagaaattaaagccaacaagccaaccatggcacccagtaagagtatt 80
           ||||||||| || |||||||||| |||||| |||||||||||||| |||  |||||||||
Sbjct: 5   tctcattctacttgagaaattaaggccaaccagccaaccatggcaaccaacaagagtatt 64

                                                                       
Query: 81  aagggtgtggtcatttgtgttctcatactaggtttagttctggagcaggtccagatggag 140
           ||| | ||||| ||||||||||||||| | |||||||||||||||||||||||  | || 
Sbjct: 65  aagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaa 124

                                                        
Query: 141 ggaaagagttgctgcaagaccacgtttgccagaaactgttacaac 185
           |  |||||||||||||||| ||||   | ||||||||| ||||||
Sbjct: 125 gccaagagttgctgcaagaacacgacgggcagaaactgctacaac 169



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>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872
          Length = 540

 Score =  137 bits (69), Expect = 1e-29
 Identities = 141/165 (85%)
 Strand = Plus / Plus

                                                                       
Query: 21  tctcattcttctggagaaattaaagccaacaagccaaccatggcacccagtaagagtatt 80
           ||||||||| || |||||||||| |||||| |||||||||||||| |||  |||||||||
Sbjct: 5   tctcattctacttgagaaattaaggccaaccagccaaccatggcaaccaacaagagtatt 64

                                                                       
Query: 81  aagggtgtggtcatttgtgttctcatactaggtttagttctggagcaggtccagatggag 140
           ||| | ||||| ||||||||||||||| | |||||||||||||||||||||||  | || 
Sbjct: 65  aagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaa 124

                                                        
Query: 141 ggaaagagttgctgcaagaccacgtttgccagaaactgttacaac 185
           |  |||||||||||||||| ||||   | ||||||||| ||||||
Sbjct: 125 gccaagagttgctgcaagaacacgacgggcagaaactgctacaac 169



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>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin
          Length = 414

 Score = 99.6 bits (50), Expect = 3e-18
 Identities = 98/114 (85%)
 Strand = Plus / Plus

                                                                       
Query: 72  aagagtattaagggtgtggtcatttgtgttctcatactaggtttagttctggagcaggtc 131
           |||||||||||| | ||||| ||||||||||||||| | |||||||||||||||||||||
Sbjct: 13  aagagtattaagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtc 72

                                                                 
Query: 132 cagatggagggaaagagttgctgcaagaccacgtttgccagaaactgttacaac 185
           ||  | || || |||||||||||||||| ||||   | ||||||||| ||||||
Sbjct: 73  caagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgctacaac 126



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>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds
          Length = 641

 Score = 89.7 bits (45), Expect = 3e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                       
Query: 79  ttaagggtgtggtcatttgtgttctcatactaggtttagttctggagcaggtccagatgg 138
           ||||| |||||||  ||||||| ||| |||||||||||||||||| |||||||||| | |
Sbjct: 68  ttaagtgtgtggtgctttgtgtcctcgtactaggtttagttctggggcaggtccaggtag 127

                            
Query: 139 agggaaagagttgctgc 155
           |||||||||||||||||
Sbjct: 128 agggaaagagttgctgc 144



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>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds
          Length = 678

 Score = 83.8 bits (42), Expect = 2e-13
 Identities = 96/114 (84%)
 Strand = Plus / Plus

                                                                       
Query: 51  aagccaaccatggcacccagtaagagtattaagggtgtggtcatttgtgttctcatacta 110
           ||||||||||||||  | || ||| |||| ||| |||  || |||||| | ||||| || 
Sbjct: 73  aagccaaccatggccacaagcaagggtatcaagagtgctgttatttgtttcctcatgctg 132

                                                                 
Query: 111 ggtttagttctggagcaggtccagatggagggaaagagttgctgcaagaccacg 164
           |||||||||||||||||||||||| | ||||| |||||||||||||||| ||||
Sbjct: 133 ggtttagttctggagcaggtccaggtagagggcaagagttgctgcaagagcacg 186



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>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3)
          Length = 544

 Score = 81.8 bits (41), Expect = 7e-13
 Identities = 80/93 (86%)
 Strand = Plus / Plus

                                                                       
Query: 93  atttgtgttctcatactaggtttagttctggagcaggtccagatggagggaaagagttgc 152
           ||||||||||||||| | |||||||||||||||||||||||  | || || |||||||||
Sbjct: 4   atttgtgttctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgc 63

                                            
Query: 153 tgcaagaccacgtttgccagaaactgttacaac 185
           ||||||| ||||   | ||||||||| ||||||
Sbjct: 64  tgcaagaacacgacgggcagaaactgctacaac 96



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>dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, complete cds
          Length = 616

 Score = 71.9 bits (36), Expect = 7e-10
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                       
Query: 79  ttaagggtgtggtcatttgtgttctcatactaggtttagttctggagcaggtccagatgg 138
           ||||| |||||||||||||||||||  || | ||  ||||||||||||| |||||  | |
Sbjct: 42  ttaagagtgtggtcatttgtgttcttgtattggggatagttctggagcatgtccaagtag 101

                               
Query: 139 agggaaagagttgctgcaag 158
           ||||||||||||||||||||
Sbjct: 102 agggaaagagttgctgcaag 121



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>dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, complete cds
          Length = 677

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 68/80 (85%)
 Strand = Plus / Plus

                                                                       
Query: 79  ttaagggtgtggtcatttgtgttctcatactaggtttagttctggagcaggtccagatgg 138
           ||||| |||| ||||||||||| ||  || | ||  |||||||||||||||||||  | |
Sbjct: 43  ttaagagtgtagtcatttgtgtccttgtattggggatagttctggagcaggtccaagtag 102

                               
Query: 139 agggaaagagttgctgcaag 158
           ||||||||||||||||||||
Sbjct: 103 agggaaagagttgctgcaag 122



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>emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene
          Length = 897

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 49/58 (84%)
 Strand = Plus / Plus

                                                                     
Query: 102 ctcatactaggtttagttctggagcaggtccagatggagggaaagagttgctgcaaga 159
           |||||||| || || |||||||| ||||| ||  | || |||||||||||||||||||
Sbjct: 49  ctcatactggggttggttctggaacaggtgcaagtagaaggaaagagttgctgcaaga 106



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>emb|BX324159.6| Zebrafish DNA sequence from clone CH211-10O1 in linkage group 21,
              complete sequence
          Length = 178610

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 77     tattaagggtgtggtcatttg 97
              |||||||||||||||||||||
Sbjct: 161613 tattaagggtgtggtcatttg 161633



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>ref|NM_019741.2| Mus musculus solute carrier family 2 (facilitated glucose
            transporter), member 5 (Slc2a5), mRNA
          Length = 3097

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 143  aaagagttgctgcaagacca 162
            ||||||||||||||||||||
Sbjct: 2442 aaagagttgctgcaagacca 2461



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>gb|BC023500.1| Mus musculus solute carrier family 2 (facilitated glucose
            transporter), member 5, mRNA (cDNA clone MGC:32452
            IMAGE:5043284), complete cds
          Length = 2080

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 143  aaagagttgctgcaagacca 162
            ||||||||||||||||||||
Sbjct: 1817 aaagagttgctgcaagacca 1836



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>dbj|AK029720.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4930505E07 product:solute carrier family 2
            (facilitated glucose transporter), member 5, full insert
            sequence
          Length = 3097

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 143  aaagagttgctgcaagacca 162
            ||||||||||||||||||||
Sbjct: 2442 aaagagttgctgcaagacca 2461



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>emb|AL606971.22| Mouse DNA sequence from clone RP23-123I20 on chromosome 4, complete
             sequence
          Length = 91841

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   aaagagttgctgcaagacca 162
             ||||||||||||||||||||
Sbjct: 55311 aaagagttgctgcaagacca 55330



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>gb|AF161071.1|AF161071 Mus musculus fructose transporter GLUT5 mRNA, complete cds
          Length = 2069

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 143  aaagagttgctgcaagacca 162
            ||||||||||||||||||||
Sbjct: 1806 aaagagttgctgcaagacca 1825



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>ref|NM_117425.2| Arabidopsis thaliana AMT1 (AMMONIUM TRANSPORT 1); ammonium
            transporter AT4G13510 (AMT1) mRNA, complete cds
          Length = 1736

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 86   tgtggtcatttgtgttctc 104
            |||||||||||||||||||
Sbjct: 1689 tgtggtcatttgtgttctc 1707



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>gb|AC121851.4| Mus musculus chromosome 8 clone RP24-92F5, complete sequence
          Length = 184603

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 80     taagggtgtggtcatttgt 98
              |||||||||||||||||||
Sbjct: 124054 taagggtgtggtcatttgt 124036



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>gb|AC114613.12| Mus musculus chromosome 5, clone RP24-80F7, complete sequence
          Length = 190200

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 18     atttctcattcttctggagaaattaaa 44
              |||||| ||||||||||| ||||||||
Sbjct: 135423 atttcttattcttctggacaaattaaa 135397



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>gb|AC091472.2| Mus musculus chromosome X clones RP21-90B15, RP21-12I6 complete
             sequence
          Length = 193449

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 40    ttaaagccaacaagccaac 58
             |||||||||||||||||||
Sbjct: 94114 ttaaagccaacaagccaac 94132



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>ref|XM_416804.1| PREDICTED: Gallus gallus similar to ribosomal protein S6 kinase 2
            (LOC418605), mRNA
          Length = 4051

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 122  ggagcaggtccagatggag 140
            |||||||||||||||||||
Sbjct: 2176 ggagcaggtccagatggag 2194



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>ref|NG_005425.2| Homo sapiens PHF5A pseudogene 6 (LOC450250) on chromosome 15
          Length = 1523

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 145 agagttgctgcaagaccacgttt 167
           ||||||||||||||| |||||||
Sbjct: 966 agagttgctgcaagaacacgttt 944



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>gb|AC149571.3| Rhinolophus ferrumequinum clone VMRC7-305L23, complete sequence
          Length = 190426

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 19    tttctcattcttctggaga 37
             |||||||||||||||||||
Sbjct: 28499 tttctcattcttctggaga 28481



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>gb|AC124434.3| Mus musculus BAC clone RP24-250K22 from chromosome 8, complete sequence
          Length = 167741

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 80    taagggtgtggtcatttgt 98
             |||||||||||||||||||
Sbjct: 51534 taagggtgtggtcatttgt 51516



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>gb|AC147964.10| Medicago truncatula clone mth2-5i18, complete sequence
          Length = 134939

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 72     aagagtattaagggtgtgg 90
              |||||||||||||||||||
Sbjct: 109342 aagagtattaagggtgtgg 109360



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>emb|AL445648.18| Human DNA sequence from clone RP11-373M8 on chromosome 1 Contains the
             3' end of the SRRM1 gene for serine/arginine repetitive
             matrix 1, the 5' end of the CLIC4 gene for chloride
             intracellular channel 4 and a CpG island, complete
             sequence
          Length = 133587

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 132   cagatggagggaaagagtt 150
             |||||||||||||||||||
Sbjct: 62855 cagatggagggaaagagtt 62873



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>gb|AE014819.1| Plasmodium falciparum 3D7 chromosome 14 section 4 of 13 of the complete
              sequence
          Length = 251448

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 26     ttcttctggagaaattaaa 44
              |||||||||||||||||||
Sbjct: 213626 ttcttctggagaaattaaa 213608



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>gb|AC015712.10| Homo sapiens chromosome 15, clone RP11-66B24, complete sequence
          Length = 173428

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 145   agagttgctgcaagaccacgttt 167
             ||||||||||||||| |||||||
Sbjct: 54190 agagttgctgcaagaacacgttt 54212



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>emb|AL161536.2|ATCHRIV36 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 36
          Length = 199634

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 86     tgtggtcatttgtgttctc 104
              |||||||||||||||||||
Sbjct: 146613 tgtggtcatttgtgttctc 146631



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>emb|AL049656.1|ATT6G15 Arabidopsis thaliana DNA chromosome 4, BAC clone  T6G15 (ESSA project)
          Length = 113970

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 86    tgtggtcatttgtgttctc 104
             |||||||||||||||||||
Sbjct: 44405 tgtggtcatttgtgttctc 44423



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>emb|CR762497.17| Zebrafish DNA sequence from clone DKEY-162B3 in linkage group 13,
             complete sequence
          Length = 258636

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 165   tttgccagaaactgttaca 183
             |||||||||||||||||||
Sbjct: 78301 tttgccagaaactgttaca 78319



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>emb|CR352516.1| Gallus gallus finished cDNA, clone ChEST837n1
          Length = 740

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 122 ggagcaggtccagatggag 140
           |||||||||||||||||||
Sbjct: 328 ggagcaggtccagatggag 346



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>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 19     tttctcattcttctggaga 37
              |||||||||||||||||||
Sbjct: 644343 tttctcattcttctggaga 644325



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>emb|X75879.1|ATAMT1 A.thaliana amt1 mRNA
          Length = 1700

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 86   tgtggtcatttgtgttctc 104
            |||||||||||||||||||
Sbjct: 1673 tgtggtcatttgtgttctc 1691



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>emb|CT573036.11| Mouse DNA sequence from clone RP24-376I11 on chromosome 9, complete
             sequence
          Length = 136639

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 135   atggagggaaagagttgct 153
             |||||||||||||||||||
Sbjct: 97710 atggagggaaagagttgct 97728



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>emb|BX649231.4| Zebrafish DNA sequence from clone DKEY-225H23 in linkage group 20,
             complete sequence
          Length = 153569

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 16    ccatttctcattcttctggagaa 38
             ||||||||||| |||||||||||
Sbjct: 52688 ccatttctcatccttctggagaa 52710



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>gb|AC090052.15| Homo sapiens 12 BAC RP11-295G12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 150200

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 18    atttctcattcttctggag 36
             |||||||||||||||||||
Sbjct: 29173 atttctcattcttctggag 29191



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>emb|BX248124.7| Zebrafish DNA sequence from clone CH211-214E3 in linkage group 12,
             complete sequence
          Length = 211571

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 17    catttctcattcttctggagaaa 39
             ||||||| |||||||||||||||
Sbjct: 86918 catttcttattcttctggagaaa 86896



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>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome
          Length = 5224283

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 26     ttcttctggagaaattaaa 44
              |||||||||||||||||||
Sbjct: 863661 ttcttctggagaaattaaa 863643



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>emb|AL672297.7| Mouse DNA sequence from clone RP23-137E3 on chromosome X, complete
             sequence
          Length = 195519

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 132   cagatggagggaaagagtt 150
             |||||||||||||||||||
Sbjct: 43395 cagatggagggaaagagtt 43413



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>emb|AL672055.8| Mouse DNA sequence from clone RP23-339K2 on chromosome X, complete
             sequence
          Length = 232188

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 83    gggtgtggtcatttgtgtt 101
             |||||||||||||||||||
Sbjct: 45889 gggtgtggtcatttgtgtt 45871



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>emb|AL672002.14| Mouse DNA sequence from clone RP23-252M19 on chromosome X, complete
             sequence
          Length = 225712

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 40    ttaaagccaacaagccaac 58
             |||||||||||||||||||
Sbjct: 97250 ttaaagccaacaagccaac 97268


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,969,421
Number of Sequences: 3902068
Number of extensions: 1969421
Number of successful extensions: 170227
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 170077
Number of HSP's gapped (non-prelim): 145
length of query: 187
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 165
effective length of database: 17,147,199,772
effective search space: 2829287962380
effective search space used: 2829287962380
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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