| Clone Name | baet10d04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds Length = 2406 Score = 268 bits (135), Expect = 6e-69 Identities = 174/187 (93%) Strand = Plus / Plus Query: 1 atcaatccaacgtagccatttctcattcttctggagaaattaaagccaacaagccaacca 60 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1472 atcaatccaacatagccatttctcattcttctggagaaattaaagccaagaagccaacca 1531 Query: 61 tggcacccagtaagagtattaagggtgtggtcatttgtgttctcatactaggtttagttc 120 |||||||||| |||||||||||| ||||||||||||||||||||||||| | |||||||| Sbjct: 1532 tggcacccagcaagagtattaagagtgtggtcatttgtgttctcatactggttttagttc 1591 Query: 121 tggagcaggtccagatggagggaaagagttgctgcaagaccacgtttgccagaaactgtt 180 |||||||||||||| |||||||||| |||||||||||| |||||| || |||||||| | Sbjct: 1592 tggagcaggtccaggtggagggaaaaagttgctgcaaggacacgttagctagaaactgct 1651 Query: 181 acaacac 187 ||||||| Sbjct: 1652 acaacac 1658
>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4) Length = 658 Score = 212 bits (107), Expect = 3e-52 Identities = 140/151 (92%) Strand = Plus / Plus Query: 37 aaattaaagccaacaagccaaccatggcacccagtaagagtattaagggtgtggtcattt 96 ||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 3 aaattaaagccaagaagccaaccatggcacccagcaagagtattaagagtgtggtcattt 62 Query: 97 gtgttctcatactaggtttagttctggagcaggtccagatggagggaaagagttgctgca 156 ||||||||||||| |||||||||||||||||||||||| |||||||||| |||||||||| Sbjct: 63 gtgttctcatactgggtttagttctggagcaggtccaggtggagggaaaaagttgctgca 122 Query: 157 agaccacgtttgccagaaactgttacaacac 187 || |||||| || |||||||| |||||||| Sbjct: 123 aggacacgttagctagaaactgctacaacac 153
>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4) Length = 637 Score = 202 bits (102), Expect = 3e-49 Identities = 135/146 (92%) Strand = Plus / Plus Query: 42 aaagccaacaagccaaccatggcacccagtaagagtattaagggtgtggtcatttgtgtt 101 |||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct: 1 aaagccaagaagccaaccatggcacccagcaagagtattaagagtgtggtcatttgtgtt 60 Query: 102 ctcatactaggtttagttctggagcaggtccagatggagggaaagagttgctgcaagacc 161 |||||||| |||||||||||||||||||||||| |||||||||| |||||||||||| | Sbjct: 61 ctcatactgggtttagttctggagcaggtccaggtggagggaaaaagttgctgcaaggac 120 Query: 162 acgtttgccagaaactgttacaacac 187 ||||| || |||||||| |||||||| Sbjct: 121 acgttagctagaaactgctacaacac 146
>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds Length = 2259 Score = 161 bits (81), Expect = 9e-37 Identities = 159/185 (85%) Strand = Plus / Plus Query: 1 atcaatccaacgtagccatttctcattcttctggagaaattaaagccaacaagccaacca 60 |||||||||||||| |||| ||||||||| | |||||||||| |||||| ||||||||| Sbjct: 1493 atcaatccaacgtaaccatatctcattctacatgagaaattaaggccaaccagccaacca 1552 Query: 61 tggcacccagtaagagtattaagggtgtggtcatttgtgttctcatactaggtttagttc 120 ||||| ||| |||||||||||| | ||||| ||||||||||||||| | |||||||||| Sbjct: 1553 tggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagttc 1612 Query: 121 tggagcaggtccagatggagggaaagagttgctgcaagaccacgtttgccagaaactgtt 180 ||||||||||||| | || || |||||||||||||||| |||| | ||||||||| | Sbjct: 1613 tggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgct 1672 Query: 181 acaac 185 ||||| Sbjct: 1673 acaac 1677
>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940 Length = 663 Score = 137 bits (69), Expect = 1e-29 Identities = 141/165 (85%) Strand = Plus / Plus Query: 21 tctcattcttctggagaaattaaagccaacaagccaaccatggcacccagtaagagtatt 80 ||||||||| || |||||||||| |||||| |||||||||||||| ||| ||||||||| Sbjct: 5 tctcattctacttgagaaattaaggccaaccagccaaccatggcaaccaacaagagtatt 64 Query: 81 aagggtgtggtcatttgtgttctcatactaggtttagttctggagcaggtccagatggag 140 ||| | ||||| ||||||||||||||| | ||||||||||||||||||||||| | || Sbjct: 65 aagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaa 124 Query: 141 ggaaagagttgctgcaagaccacgtttgccagaaactgttacaac 185 | |||||||||||||||| |||| | ||||||||| |||||| Sbjct: 125 gccaagagttgctgcaagaacacgacgggcagaaactgctacaac 169
>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348 Length = 608 Score = 137 bits (69), Expect = 1e-29 Identities = 141/165 (85%) Strand = Plus / Plus Query: 21 tctcattcttctggagaaattaaagccaacaagccaaccatggcacccagtaagagtatt 80 ||||||||| || |||||||||| |||||| |||||||||||||| ||| ||||||||| Sbjct: 5 tctcattctacttgagaaattaaggccaaccagccaaccatggcaaccaacaagagtatt 64 Query: 81 aagggtgtggtcatttgtgttctcatactaggtttagttctggagcaggtccagatggag 140 ||| | ||||| ||||||||||||||| | ||||||||||||||||||||||| | || Sbjct: 65 aagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaa 124 Query: 141 ggaaagagttgctgcaagaccacgtttgccagaaactgttacaac 185 | |||||||||||||||| |||| | ||||||||| |||||| Sbjct: 125 gccaagagttgctgcaagaacacgacgggcagaaactgctacaac 169
>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872 Length = 540 Score = 137 bits (69), Expect = 1e-29 Identities = 141/165 (85%) Strand = Plus / Plus Query: 21 tctcattcttctggagaaattaaagccaacaagccaaccatggcacccagtaagagtatt 80 ||||||||| || |||||||||| |||||| |||||||||||||| ||| ||||||||| Sbjct: 5 tctcattctacttgagaaattaaggccaaccagccaaccatggcaaccaacaagagtatt 64 Query: 81 aagggtgtggtcatttgtgttctcatactaggtttagttctggagcaggtccagatggag 140 ||| | ||||| ||||||||||||||| | ||||||||||||||||||||||| | || Sbjct: 65 aagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaa 124 Query: 141 ggaaagagttgctgcaagaccacgtttgccagaaactgttacaac 185 | |||||||||||||||| |||| | ||||||||| |||||| Sbjct: 125 gccaagagttgctgcaagaacacgacgggcagaaactgctacaac 169
>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin Length = 414 Score = 99.6 bits (50), Expect = 3e-18 Identities = 98/114 (85%) Strand = Plus / Plus Query: 72 aagagtattaagggtgtggtcatttgtgttctcatactaggtttagttctggagcaggtc 131 |||||||||||| | ||||| ||||||||||||||| | ||||||||||||||||||||| Sbjct: 13 aagagtattaagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtc 72 Query: 132 cagatggagggaaagagttgctgcaagaccacgtttgccagaaactgttacaac 185 || | || || |||||||||||||||| |||| | ||||||||| |||||| Sbjct: 73 caagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgctacaac 126
>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds Length = 641 Score = 89.7 bits (45), Expect = 3e-15 Identities = 69/77 (89%) Strand = Plus / Plus Query: 79 ttaagggtgtggtcatttgtgttctcatactaggtttagttctggagcaggtccagatgg 138 ||||| ||||||| ||||||| ||| |||||||||||||||||| |||||||||| | | Sbjct: 68 ttaagtgtgtggtgctttgtgtcctcgtactaggtttagttctggggcaggtccaggtag 127 Query: 139 agggaaagagttgctgc 155 ||||||||||||||||| Sbjct: 128 agggaaagagttgctgc 144
>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds Length = 678 Score = 83.8 bits (42), Expect = 2e-13 Identities = 96/114 (84%) Strand = Plus / Plus Query: 51 aagccaaccatggcacccagtaagagtattaagggtgtggtcatttgtgttctcatacta 110 |||||||||||||| | || ||| |||| ||| ||| || |||||| | ||||| || Sbjct: 73 aagccaaccatggccacaagcaagggtatcaagagtgctgttatttgtttcctcatgctg 132 Query: 111 ggtttagttctggagcaggtccagatggagggaaagagttgctgcaagaccacg 164 |||||||||||||||||||||||| | ||||| |||||||||||||||| |||| Sbjct: 133 ggtttagttctggagcaggtccaggtagagggcaagagttgctgcaagagcacg 186
>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3) Length = 544 Score = 81.8 bits (41), Expect = 7e-13 Identities = 80/93 (86%) Strand = Plus / Plus Query: 93 atttgtgttctcatactaggtttagttctggagcaggtccagatggagggaaagagttgc 152 ||||||||||||||| | ||||||||||||||||||||||| | || || ||||||||| Sbjct: 4 atttgtgttctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgc 63 Query: 153 tgcaagaccacgtttgccagaaactgttacaac 185 ||||||| |||| | ||||||||| |||||| Sbjct: 64 tgcaagaacacgacgggcagaaactgctacaac 96
>dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, complete cds Length = 616 Score = 71.9 bits (36), Expect = 7e-10 Identities = 69/80 (86%) Strand = Plus / Plus Query: 79 ttaagggtgtggtcatttgtgttctcatactaggtttagttctggagcaggtccagatgg 138 ||||| ||||||||||||||||||| || | || ||||||||||||| ||||| | | Sbjct: 42 ttaagagtgtggtcatttgtgttcttgtattggggatagttctggagcatgtccaagtag 101 Query: 139 agggaaagagttgctgcaag 158 |||||||||||||||||||| Sbjct: 102 agggaaagagttgctgcaag 121
>dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, complete cds Length = 677 Score = 63.9 bits (32), Expect = 2e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 79 ttaagggtgtggtcatttgtgttctcatactaggtttagttctggagcaggtccagatgg 138 ||||| |||| ||||||||||| || || | || ||||||||||||||||||| | | Sbjct: 43 ttaagagtgtagtcatttgtgtccttgtattggggatagttctggagcaggtccaagtag 102 Query: 139 agggaaagagttgctgcaag 158 |||||||||||||||||||| Sbjct: 103 agggaaagagttgctgcaag 122
>emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene Length = 897 Score = 44.1 bits (22), Expect = 0.15 Identities = 49/58 (84%) Strand = Plus / Plus Query: 102 ctcatactaggtttagttctggagcaggtccagatggagggaaagagttgctgcaaga 159 |||||||| || || |||||||| ||||| || | || ||||||||||||||||||| Sbjct: 49 ctcatactggggttggttctggaacaggtgcaagtagaaggaaagagttgctgcaaga 106
>emb|BX324159.6| Zebrafish DNA sequence from clone CH211-10O1 in linkage group 21, complete sequence Length = 178610 Score = 42.1 bits (21), Expect = 0.59 Identities = 21/21 (100%) Strand = Plus / Plus Query: 77 tattaagggtgtggtcatttg 97 ||||||||||||||||||||| Sbjct: 161613 tattaagggtgtggtcatttg 161633
>ref|NM_019741.2| Mus musculus solute carrier family 2 (facilitated glucose transporter), member 5 (Slc2a5), mRNA Length = 3097 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 aaagagttgctgcaagacca 162 |||||||||||||||||||| Sbjct: 2442 aaagagttgctgcaagacca 2461
>gb|BC023500.1| Mus musculus solute carrier family 2 (facilitated glucose transporter), member 5, mRNA (cDNA clone MGC:32452 IMAGE:5043284), complete cds Length = 2080 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 aaagagttgctgcaagacca 162 |||||||||||||||||||| Sbjct: 1817 aaagagttgctgcaagacca 1836
>dbj|AK029720.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930505E07 product:solute carrier family 2 (facilitated glucose transporter), member 5, full insert sequence Length = 3097 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 aaagagttgctgcaagacca 162 |||||||||||||||||||| Sbjct: 2442 aaagagttgctgcaagacca 2461
>emb|AL606971.22| Mouse DNA sequence from clone RP23-123I20 on chromosome 4, complete sequence Length = 91841 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 aaagagttgctgcaagacca 162 |||||||||||||||||||| Sbjct: 55311 aaagagttgctgcaagacca 55330
>gb|AF161071.1|AF161071 Mus musculus fructose transporter GLUT5 mRNA, complete cds Length = 2069 Score = 40.1 bits (20), Expect = 2.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 aaagagttgctgcaagacca 162 |||||||||||||||||||| Sbjct: 1806 aaagagttgctgcaagacca 1825
>ref|NM_117425.2| Arabidopsis thaliana AMT1 (AMMONIUM TRANSPORT 1); ammonium transporter AT4G13510 (AMT1) mRNA, complete cds Length = 1736 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 tgtggtcatttgtgttctc 104 ||||||||||||||||||| Sbjct: 1689 tgtggtcatttgtgttctc 1707
>gb|AC121851.4| Mus musculus chromosome 8 clone RP24-92F5, complete sequence Length = 184603 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 taagggtgtggtcatttgt 98 ||||||||||||||||||| Sbjct: 124054 taagggtgtggtcatttgt 124036
>gb|AC114613.12| Mus musculus chromosome 5, clone RP24-80F7, complete sequence Length = 190200 Score = 38.2 bits (19), Expect = 9.2 Identities = 25/27 (92%) Strand = Plus / Minus Query: 18 atttctcattcttctggagaaattaaa 44 |||||| ||||||||||| |||||||| Sbjct: 135423 atttcttattcttctggacaaattaaa 135397
>gb|AC091472.2| Mus musculus chromosome X clones RP21-90B15, RP21-12I6 complete sequence Length = 193449 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 40 ttaaagccaacaagccaac 58 ||||||||||||||||||| Sbjct: 94114 ttaaagccaacaagccaac 94132
>ref|XM_416804.1| PREDICTED: Gallus gallus similar to ribosomal protein S6 kinase 2 (LOC418605), mRNA Length = 4051 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 122 ggagcaggtccagatggag 140 ||||||||||||||||||| Sbjct: 2176 ggagcaggtccagatggag 2194
>ref|NG_005425.2| Homo sapiens PHF5A pseudogene 6 (LOC450250) on chromosome 15 Length = 1523 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 145 agagttgctgcaagaccacgttt 167 ||||||||||||||| ||||||| Sbjct: 966 agagttgctgcaagaacacgttt 944
>gb|AC149571.3| Rhinolophus ferrumequinum clone VMRC7-305L23, complete sequence Length = 190426 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 tttctcattcttctggaga 37 ||||||||||||||||||| Sbjct: 28499 tttctcattcttctggaga 28481
>gb|AC124434.3| Mus musculus BAC clone RP24-250K22 from chromosome 8, complete sequence Length = 167741 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 taagggtgtggtcatttgt 98 ||||||||||||||||||| Sbjct: 51534 taagggtgtggtcatttgt 51516
>gb|AC147964.10| Medicago truncatula clone mth2-5i18, complete sequence Length = 134939 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 72 aagagtattaagggtgtgg 90 ||||||||||||||||||| Sbjct: 109342 aagagtattaagggtgtgg 109360
>emb|AL445648.18| Human DNA sequence from clone RP11-373M8 on chromosome 1 Contains the 3' end of the SRRM1 gene for serine/arginine repetitive matrix 1, the 5' end of the CLIC4 gene for chloride intracellular channel 4 and a CpG island, complete sequence Length = 133587 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 132 cagatggagggaaagagtt 150 ||||||||||||||||||| Sbjct: 62855 cagatggagggaaagagtt 62873
>gb|AE014819.1| Plasmodium falciparum 3D7 chromosome 14 section 4 of 13 of the complete sequence Length = 251448 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 26 ttcttctggagaaattaaa 44 ||||||||||||||||||| Sbjct: 213626 ttcttctggagaaattaaa 213608
>gb|AC015712.10| Homo sapiens chromosome 15, clone RP11-66B24, complete sequence Length = 173428 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 145 agagttgctgcaagaccacgttt 167 ||||||||||||||| ||||||| Sbjct: 54190 agagttgctgcaagaacacgttt 54212
>emb|AL161536.2|ATCHRIV36 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 36 Length = 199634 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 tgtggtcatttgtgttctc 104 ||||||||||||||||||| Sbjct: 146613 tgtggtcatttgtgttctc 146631
>emb|AL049656.1|ATT6G15 Arabidopsis thaliana DNA chromosome 4, BAC clone T6G15 (ESSA project) Length = 113970 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 tgtggtcatttgtgttctc 104 ||||||||||||||||||| Sbjct: 44405 tgtggtcatttgtgttctc 44423
>emb|CR762497.17| Zebrafish DNA sequence from clone DKEY-162B3 in linkage group 13, complete sequence Length = 258636 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 165 tttgccagaaactgttaca 183 ||||||||||||||||||| Sbjct: 78301 tttgccagaaactgttaca 78319
>emb|CR352516.1| Gallus gallus finished cDNA, clone ChEST837n1 Length = 740 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 122 ggagcaggtccagatggag 140 ||||||||||||||||||| Sbjct: 328 ggagcaggtccagatggag 346
>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold Length = 1756392 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 tttctcattcttctggaga 37 ||||||||||||||||||| Sbjct: 644343 tttctcattcttctggaga 644325
>emb|X75879.1|ATAMT1 A.thaliana amt1 mRNA Length = 1700 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 tgtggtcatttgtgttctc 104 ||||||||||||||||||| Sbjct: 1673 tgtggtcatttgtgttctc 1691
>emb|CT573036.11| Mouse DNA sequence from clone RP24-376I11 on chromosome 9, complete sequence Length = 136639 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 135 atggagggaaagagttgct 153 ||||||||||||||||||| Sbjct: 97710 atggagggaaagagttgct 97728
>emb|BX649231.4| Zebrafish DNA sequence from clone DKEY-225H23 in linkage group 20, complete sequence Length = 153569 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Plus Query: 16 ccatttctcattcttctggagaa 38 ||||||||||| ||||||||||| Sbjct: 52688 ccatttctcatccttctggagaa 52710
>gb|AC090052.15| Homo sapiens 12 BAC RP11-295G12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 150200 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 18 atttctcattcttctggag 36 ||||||||||||||||||| Sbjct: 29173 atttctcattcttctggag 29191
>emb|BX248124.7| Zebrafish DNA sequence from clone CH211-214E3 in linkage group 12, complete sequence Length = 211571 Score = 38.2 bits (19), Expect = 9.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 17 catttctcattcttctggagaaa 39 ||||||| ||||||||||||||| Sbjct: 86918 catttcttattcttctggagaaa 86896
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 26 ttcttctggagaaattaaa 44 ||||||||||||||||||| Sbjct: 863661 ttcttctggagaaattaaa 863643
>emb|AL672297.7| Mouse DNA sequence from clone RP23-137E3 on chromosome X, complete sequence Length = 195519 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 132 cagatggagggaaagagtt 150 ||||||||||||||||||| Sbjct: 43395 cagatggagggaaagagtt 43413
>emb|AL672055.8| Mouse DNA sequence from clone RP23-339K2 on chromosome X, complete sequence Length = 232188 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 gggtgtggtcatttgtgtt 101 ||||||||||||||||||| Sbjct: 45889 gggtgtggtcatttgtgtt 45871
>emb|AL672002.14| Mouse DNA sequence from clone RP23-252M19 on chromosome X, complete sequence Length = 225712 Score = 38.2 bits (19), Expect = 9.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 40 ttaaagccaacaagccaac 58 ||||||||||||||||||| Sbjct: 97250 ttaaagccaacaagccaac 97268 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,969,421 Number of Sequences: 3902068 Number of extensions: 1969421 Number of successful extensions: 170227 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 47 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 170077 Number of HSP's gapped (non-prelim): 145 length of query: 187 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 165 effective length of database: 17,147,199,772 effective search space: 2829287962380 effective search space used: 2829287962380 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)