Clone Name	baet10c09
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	TMP14_ARATH (Q8LCA1) Thylakoid membrane phosphoprotein 14 kDa, c...	45	9e-05
2	SPD1_NEPCL (P19837) Spidroin 1 (Dragline silk fibroin 1) (Fragment)	35	0.055
3	CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Frag...	35	0.055
4	IP3KB_RAT (P42335) Inositol-trisphosphate 3-kinase B (EC 2.7.1.1...	35	0.072
5	CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor	35	0.094
6	CO1A2_RABIT (Q28668) Collagen alpha-2(I) chain precursor (Fragment)	34	0.12
7	CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragme...	34	0.12
8	CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain	34	0.16
9	CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long...	34	0.16
10	COHA1_CANFA (Q9N281) Collagen alpha-1(XVII) chain (Bullous pemph...	33	0.27
11	CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor	33	0.27
12	COHA1_HUMAN (Q9UMD9) Collagen alpha-1(XVII) chain (Bullous pemph...	33	0.27
13	CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor	33	0.36
14	IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2	33	0.36
15	CO6A3_CHICK (P15989) Collagen alpha-3(VI) chain precursor	33	0.36
16	COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor	32	0.46
17	CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor	32	0.46
18	CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor	32	0.61
19	VNUA_PRVKA (P33485) Probable nuclear antigen	32	0.61
20	COBA1_BOVIN (Q28083) Collagen alpha-1(XI) chain precursor (Fragm...	32	0.61
21	AP1G2_MOUSE (O88512) AP-1 complex subunit gamma-2 (Adapter-relat...	32	0.61
22	COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor	32	0.61
23	COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor	32	0.79
24	CO5A1_RAT (Q9JI03) Collagen alpha-1(V) chain precursor	32	0.79
25	CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor	32	0.79
26	CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor	32	0.79
27	CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor	32	0.79
28	CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor	32	0.79
29	PG03_MYCTU (P56877) Hypothetical PE-PGRS family protein PE_PGRS3...	32	0.79
30	CO6A1_HUMAN (P12109) Collagen alpha-1(VI) chain precursor	32	0.79
31	CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor	32	0.79
32	CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor	32	0.79
33	CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor	32	0.79
34	CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor	32	0.79
35	GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 pro...	31	1.0
36	COHA1_CHICK (Q90584) Collagen alpha-1(XVII) chain (Bullous pemph...	31	1.0
37	CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor	31	1.0
38	CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor	31	1.0
39	CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor	31	1.4
40	PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS5...	31	1.4
41	PIN4_MOUSE (Q9CWW6) Peptidyl-prolyl cis-trans isomerase NIMA-int...	30	1.8
42	CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor	30	1.8
43	CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor	30	1.8
44	CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragm...	30	1.8
45	IF2_SYMTH (Q67P86) Translation initiation factor IF-2	30	1.8
46	GRP2_PHAVU (P10496) Glycine-rich cell wall structural protein 1....	30	1.8
47	CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)	30	1.8
48	PRD13_HUMAN (Q9H4Q3) PR domain zinc finger protein 13 (PR domain...	30	2.3
49	FIBH_BOMMO (P05790) Fibroin heavy chain precursor (Fib-H) (H-fib...	30	2.3
50	CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor	30	2.3
51	CO4A5_CANFA (Q28247) Collagen alpha-5(IV) chain precursor	30	2.3
52	PKSL1_ASPPA (Q12053) Aflatoxin biosynthesis polyketide synthase ...	30	2.3
53	CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)	30	2.3
54	COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor	30	3.0
55	IER5_HUMAN (Q5VY09) Immediate early response gene 5 protein	30	3.0
56	CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor	30	3.0
57	PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regu...	30	3.0
58	MSA2_PLAF2 (Q03646) Merozoite surface antigen 2 precursor (MSA-2)	30	3.0
59	AGOL_ARATH (Q9SJK3) Argonaute-like protein At2g27880	30	3.0
60	GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10	30	3.0
61	CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Conta...	30	3.0
62	TB182_MOUSE (P58871) 182 kDa tankyrase 1-binding protein (Fragment)	30	3.0
63	CO9A2_HUMAN (Q14055) Collagen alpha-2(IX) chain precursor	30	3.0
64	MBD2_HUMAN (Q9UBB5) Methyl-CpG-binding domain protein 2 (Methyl-...	29	3.9
65	ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P...	29	3.9
66	CYLC1_HUMAN (P35663) Cylicin-1 (Cylicin I) (Multiple-band polype...	29	3.9
67	COLQ_TORMA (Q03637) Acetylcholinesterase collagenic tail peptide...	29	3.9
68	CO9A1_HUMAN (P20849) Collagen alpha-1(IX) chain precursor	29	3.9
69	CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor	29	3.9
70	COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor	29	3.9
71	CO6A3_HUMAN (P12111) Collagen alpha-3(VI) chain precursor	29	3.9
72	FOXD2_HUMAN (O60548) Forkhead box protein D2 (Forkhead-related p...	29	3.9
73	CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor	29	3.9
74	CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor	29	3.9
75	FBRL_CAEEL (Q22053) Fibrillarin	29	3.9
76	CO9A2_CHICK (P12108) Collagen alpha-2(IX) chain precursor	29	3.9
77	OTO1_ONCKE (P83371) Otolin-1 precursor	29	3.9
78	ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, ...	29	3.9
79	RHLB_XANAC (Q8PFZ3) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)	29	3.9
80	ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P...	29	5.1
81	COFA1_HUMAN (P39059) Collagen alpha-1(XV) chain precursor [Conta...	29	5.1
82	HXC12_HUMAN (P31275) Homeobox protein Hox-C12 (Hox-3F)	29	5.1
83	CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor	29	5.1
84	CTAG2_HUMAN (O75638) Cancer/testis antigen 2 (L antigen family m...	29	5.1
85	K2C5_HUMAN (P13647) Keratin, type II cytoskeletal 5 (Cytokeratin...	28	6.7
86	CO9A1_MOUSE (Q05722) Collagen alpha-1(IX) chain precursor	28	6.7
87	MSRE_MOUSE (P30204) Macrophage scavenger receptor types I and II...	28	6.7
88	CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor	28	6.7
89	CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodp...	28	6.7
90	NONA_DROVI (Q9GRW7) Protein no-on-transient A	28	6.7
91	OBSCN_HUMAN (Q5VST9) Obscurin (Obscurin-myosin light chain kinas...	28	6.7
92	CO4A2_MOUSE (P08122) Collagen alpha-2(IV) chain precursor	28	6.7
93	HMGYB_SOYBN (Q10370) HMG-Y-related protein B (SB16B protein) (Fr...	28	6.7
94	GDF7_MOUSE (P43029) Growth/differentiation factor 7 precursor (G...	28	8.8
95	CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Conta...	28	8.8
96	MBD2_MOUSE (Q9Z2E1) Methyl-CpG-binding domain protein 2 (Methyl-...	28	8.8
97	IE18_PRVIF (P11675) Immediate-early protein IE180	28	8.8
98	CO6A2_MOUSE (Q02788) Collagen alpha-2(VI) chain precursor	28	8.8
99	CO4A1_DROME (P08120) Collagen alpha-1(IV) chain precursor	28	8.8
100	IF2_THEFY (Q47RV1) Translation initiation factor IF-2	28	8.8
101	CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (End...	28	8.8
102	TB182_HUMAN (Q9C0C2) 182 kDa tankyrase 1-binding protein	28	8.8
103	DPYS_MOUSE (Q9EQF5) Dihydropyrimidinase (EC 3.5.2.2) (DHPase) (H...	28	8.8

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>TMP14_ARATH (Q8LCA1) Thylakoid membrane phosphoprotein 14 kDa, chloroplast|
           precursor
          Length = 174

 Score = 44.7 bits (104), Expect = 9e-05
 Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
 Frame = +3

Query: 195 RVASFCKRLARNVVSMXXXXXXXXXXXXXXXXXX-----FNSLKQEWDRVGDKYXXXXXX 359
           +  ++C+++ RNVV+                          + ++ W++V DKY      
Sbjct: 48  KATAYCRKIVRNVVTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLA 107

Query: 360 XXXXXGMWSAGGVVSAIDRLP 422
                 +W + G++SAIDRLP
Sbjct: 108 FAGVVALWGSAGMISAIDRLP 128

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>SPD1_NEPCL (P19837) Spidroin 1 (Dragline silk fibroin 1) (Fragment)|
          Length = 747

 Score = 35.4 bits (80), Expect = 0.055
 Identities = 35/119 (29%), Positives = 43/119 (36%)
 Frame = -3

Query: 392 AGAPHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPF 213
           AGA  A  GG GQRG+  L          G +  G+ G+ GQ              +  +
Sbjct: 402 AGAAAAAAGGAGQRGYGGL----------GNQGAGRGGLGGQGAGAAAAAAAGGAGQGGY 451

Query: 212 AEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLR 36
              GN G   G + G     G  G GG  GL      R G GA   A    G G   +R
Sbjct: 452 GGLGNQGAGRGGQ-GAAAAAGGAGQGGYGGLGSQGAGRGGQGAGAAAAAAVGAGQEGIR 509



 Score = 28.9 bits (63), Expect = 5.1
 Identities = 34/116 (29%), Positives = 38/116 (32%), Gaps = 1/116 (0%)
 Frame = -3

Query: 395 SAGAPHAERGGDGQRGHRVLVSHPVPLLFQGV-KQLGKLGVFGQXXXRLTGGH*HHVPRE 219
           +  A  A  GG GQ G+  L S       QG        G  GQ      G        +
Sbjct: 43  AGAAAAAAAGGAGQGGYGGLGSQGAGRGGQGAGAAAAAAGGAGQGGYGGLGS-------Q 95

Query: 218 PFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
               GG  G   G  A      G  G GG  GL +    R G GA   A  G G G
Sbjct: 96  GAGRGGLGGQGAGAAAAAAA--GGAGQGGYGGLGNQGAGRGGQGAAAAAAGGAGQG 149

---

>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)|
          Length = 1262

 Score = 35.4 bits (80), Expect = 0.055
 Identities = 40/129 (31%), Positives = 48/129 (37%), Gaps = 1/129 (0%)
 Frame = -3

Query: 392  AGAPHAERGGDGQRGHRVLVSHPVPLLFQGVK-QLGKLGVFGQXXXRLTGGH*HHVPREP 216
            A  P   RGG G+RG + L   P P  F G   Q G+ G  G+       G     P   
Sbjct: 786  APGPAGSRGGPGERGEQGL---PGPAGFPGAPGQNGEPGGKGERGPPGLRGE-AGPPGAA 841

Query: 215  FAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLR 36
              +GG          G + +RG PG  GA G P         GAR   G    +GDR   
Sbjct: 842  GPQGGPGAPGPPGPQGVKGERGSPGGPGAAGFP---------GARGPPGPPGNNGDRGES 892

Query: 35   SVYVSPPPP 9
                 P PP
Sbjct: 893  GPPGVPGPP 901



 Score = 28.9 bits (63), Expect = 5.1
 Identities = 22/71 (30%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
 Frame = -3

Query: 218 PFAEGGNAGLAVGR-EAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRC 42
           P  E G  G    R   G+  KRG  G  G  G+P    +R   G R   G     G++ 
Sbjct: 444 PKGERGENGTPGARGPPGEEGKRGANGEPGQNGVPGTPGERGSPGFRGLPGSNGLPGEKG 503

Query: 41  LRSVYVSPPPP 9
                 SP PP
Sbjct: 504 PAGERGSPGPP 514

---

>IP3KB_RAT (P42335) Inositol-trisphosphate 3-kinase B (EC 2.7.1.127) (Inositol|
           1,4,5-trisphosphate 3-kinase B) (IP3K B) (IP3 3-kinase
           B) (IP3K-B)
          Length = 934

 Score = 35.0 bits (79), Expect = 0.072
 Identities = 22/67 (32%), Positives = 33/67 (49%)
 Frame = -3

Query: 209 EGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLRSV 30
           E G+AG   G  +G+RR     G+GG     + +    G G+  WAG  RG   + + + 
Sbjct: 67  EPGSAG---GWRSGRRRLNSSSGSGGGSSSSN-SSSSSGVGSPSWAGRLRGDAQQVVATR 122

Query: 29  YVSPPPP 9
            +SPP P
Sbjct: 123 ILSPPGP 129

---

>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor|
          Length = 1466

 Score = 34.7 bits (78), Expect = 0.094
 Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = -3

Query: 218 PFAEGGNAGL-AVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDR 45
           P  E G AG+  V    G+  K G PG  GA GLP  A +R   G R  AG     G++
Sbjct: 445 PRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPGFRGPAGPNGIPGEK 503



 Score = 33.9 bits (76), Expect = 0.16
 Identities = 37/123 (30%), Positives = 48/123 (39%), Gaps = 8/123 (6%)
 Frame = -3

Query: 395 SAGAPHAERGGDGQRGHRVLVSHPVPLLFQGVK----QLGKLGVFGQXXXRLTGGH*HHV 228
           S GAP  +RG  G +GH      P P    G      ++G  G+ G        G     
Sbjct: 361 SNGAP-GQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARG----- 414

Query: 227 PREPFAEGGNAGLAVGR-EAGQRRKRGEPGAGGAR---GLPDVACDRRGDGARCWAGDGR 60
           P  P    G  GL  G  E G+   +GEPG  G R   G+P V   +  DG     G+  
Sbjct: 415 PPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPG 474

Query: 59  GHG 51
            +G
Sbjct: 475 ANG 477



 Score = 29.3 bits (64), Expect = 3.9
 Identities = 18/46 (39%), Positives = 19/46 (41%)
 Frame = -3

Query: 218 PFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGAR 81
           P  +G N         G    RG PG  G  GLP  A  R  DGAR
Sbjct: 281 PGLKGENGLPGENGAPGPMGPRGAPGERGRPGLPGAAGARGNDGAR 326

---

>CO1A2_RABIT (Q28668) Collagen alpha-2(I) chain precursor (Fragment)|
          Length = 526

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 35/113 (30%), Positives = 45/113 (39%), Gaps = 5/113 (4%)
 Frame = -3

Query: 368 GGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFG-QXXXRLTGGH*HHVPREPFAEGGNAG 192
           G DGQ GH+    +P          +G  G  G Q     TG H +     P    G  G
Sbjct: 97  GRDGQPGHKGERGYP-----GNAGPVGAAGAPGPQGSVGPTGKHGNRGEPGPAGSIGPVG 151

Query: 191 LAVGR----EAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDR 45
            A  R      G R  +GEPG  G RGLP +   +  +G +   G    HGD+
Sbjct: 152 AAGPRGPSGPQGIRGDKGEPGDKGPRGLPGI---KGHNGLQGLPGLAGQHGDQ 201

---

>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)|
          Length = 1362

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 34/98 (34%), Positives = 40/98 (40%), Gaps = 1/98 (1%)
 Frame = -3

Query: 374 ERGGDGQRGHRVLVSHPVPLLFQGVKQLGKL-GVFGQXXXRLTGGH*HHVPREPFAEGGN 198
           ERG  G +G R     P P  F+G++    L G+ GQ     T G       EP A G N
Sbjct: 154 ERGVAGPQGARGFPGTPGPPGFKGIRGHNGLDGLTGQPGAPGTKG-------EPGAPGEN 206

Query: 197 AGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGA 84
                    GQ   RG PG  G  G P  A  R  DG+
Sbjct: 207 G------TPGQPGARGLPGERGRIGAPGPAGARGSDGS 238



 Score = 31.2 bits (69), Expect = 1.0
 Identities = 37/126 (29%), Positives = 48/126 (38%)
 Frame = -3

Query: 422  GXPVDCRYYSAGAPHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGG 243
            G P       A  PH + G  G+ G+R     P P     V  +G  G FG         
Sbjct: 950  GNPGPSGALGAPGPHGQVGPSGKPGNR---GDPGP-----VGPVGPAGAFG--------- 992

Query: 242  H*HHVPREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDG 63
                 PR      G AG       G R ++GEPG  G RGLP +   +  +G +   G  
Sbjct: 993  -----PR------GLAG-----PQGPRGEKGEPGDKGHRGLPGL---KGHNGLQGLPGLA 1033

Query: 62   RGHGDR 45
              HGD+
Sbjct: 1034 GQHGDQ 1039

---

>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain|
          Length = 1049

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 22/53 (41%), Positives = 27/53 (50%)
 Frame = -3

Query: 227 PREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAG 69
           PR    E G+ G+A  +  G+  K G PG  GA GLP  A +R   G R  AG
Sbjct: 289 PRGERGEAGSPGIAGPK--GEDGKDGSPGEPGANGLPGAAGERGVPGFRGPAG 339



 Score = 32.3 bits (72), Expect = 0.46
 Identities = 36/113 (31%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
 Frame = -3

Query: 395 SAGAPHAERGGDGQRGHRVLVSHPVPLLFQGVK----QLGKLGVFGQXXXRLTGGH*HHV 228
           S+GAP  +RG  G +GH      P P    G      ++G  G+ G     L G      
Sbjct: 205 SSGAP-GQRGEPGPQGHAGAPGPPGPPGSDGSPGGKGEMGPAGIPG--APGLIGA----- 256

Query: 227 PREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAG 69
            R P    G  G+      GQR   GEPG  GA+G P    +R   G+   AG
Sbjct: 257 -RGPPGPPGTNGVP-----GQRGAAGEPGKNGAKGDPGPRGERGEAGSPGIAG 303



 Score = 31.2 bits (69), Expect = 1.0
 Identities = 31/114 (27%), Positives = 41/114 (35%), Gaps = 3/114 (2%)
 Frame = -3

Query: 383 PHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPFAEG 204
           P  +RGG G  G R +   P           G+ G+ G       G     +P  P   G
Sbjct: 349 PPGDRGGPGPAGPRGVAGEP-----------GRNGLPG-------GPGLRGIPGSPGGPG 390

Query: 203 GNAGLAVGREAGQRRKRGEPGAGGARGLPDV---ACDRRGDGARCWAGDGRGHG 51
            N         G+  + G PG+ G RG P V      +  DGA    G+  G G
Sbjct: 391 SNGKPGPPGSQGETGRPGPPGSPGPRGQPGVMGFPGPKGNDGAPGKNGERGGPG 444



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 19/49 (38%), Positives = 20/49 (40%)
 Frame = -3

Query: 227 PREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGAR 81
           P  P  +G N         G    RG PG  G  GLP  A  R  DGAR
Sbjct: 122 PGAPGLKGENGVPGEDGAPGPMGPRGAPGERGRPGLPGAAGARGNDGAR 170



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 27/86 (31%), Positives = 34/86 (39%), Gaps = 1/86 (1%)
 Frame = -3

Query: 371 RGGDGQRGHRVLVSHPVPLLFQGVK-QLGKLGVFGQXXXRLTGGH*HHVPREPFAEGGNA 195
           RGG G+RG +     P P  F G   Q G+ G  G+       G     P      GG+ 
Sbjct: 638 RGGPGERGEQ---GPPGPAGFPGAPGQNGEPGAKGERGAPGEKGE-GGPPGAAGPAGGSG 693

Query: 194 GLAVGREAGQRRKRGEPGAGGARGLP 117
                   G + +RG PG  GA G P
Sbjct: 694 PAGPPGPQGVKGERGSPGGPGAAGFP 719

---

>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)|
            (LC collagen)
          Length = 2944

 Score = 33.9 bits (76), Expect = 0.16
 Identities = 14/23 (60%), Positives = 18/23 (78%)
 Frame = -3

Query: 176  EAGQRRKRGEPGAGGARGLPDVA 108
            EAG++ +RG PG  G+RGLP VA
Sbjct: 1490 EAGEKGERGPPGPAGSRGLPGVA 1512



 Score = 29.6 bits (65), Expect = 3.0
 Identities = 19/56 (33%), Positives = 24/56 (42%)
 Frame = -3

Query: 176  EAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLRSVYVSPPPP 9
            E G R + G PG  G RGL      R   G +   G     GD+   +V + PP P
Sbjct: 2476 EPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKGDVGSAGLKGDKGDSAVILGPPGP 2531



 Score = 29.6 bits (65), Expect = 3.0
 Identities = 37/118 (31%), Positives = 44/118 (37%), Gaps = 3/118 (2%)
 Frame = -3

Query: 389  GAPHAE--RGGDGQRGHRVLVSHP-VPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPRE 219
            GAP  +   G DG RG   +   P +P       + G  G  GQ    L G        E
Sbjct: 2257 GAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPGQAVVGLPGAK-----GE 2311

Query: 218  PFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDR 45
              A GG AG  VG          EPGA G RGLP    ++   G     GD    G +
Sbjct: 2312 KGAPGGLAGDLVG----------EPGAKGDRGLPGPRGEKGEAGRAGEPGDPGEDGQK 2359



 Score = 28.9 bits (63), Expect = 5.1
 Identities = 24/75 (32%), Positives = 27/75 (36%), Gaps = 18/75 (24%)
 Frame = -3

Query: 227  PREPFAEGGNAGLAVGREA----------------GQRRKRGEPGAGGARGLPDVAC--D 102
            PR P  E G  G  +G E                 G R   G+PG  G  GLP  A   D
Sbjct: 1342 PRGPKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPLGDPGPRGPPGLPGTAMKGD 1401

Query: 101  RRGDGARCWAGDGRG 57
            +   G R   G G G
Sbjct: 1402 KGDRGERGPPGPGEG 1416

---

>COHA1_CANFA (Q9N281) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen|
           2) (180 kDa bullous pemphigoid antigen 2) (Fragment)
          Length = 709

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 31/90 (34%), Positives = 36/90 (40%), Gaps = 1/90 (1%)
 Frame = -3

Query: 383 PHAERGGDGQRGHRVLVSHPVPLLFQGVK-QLGKLGVFGQXXXRLTGGH*HHVPREPFAE 207
           P  +RG  G  G   ++ HP P   QG K Q G +G  G        G     P  P  E
Sbjct: 581 PKGDRGLPGTPGIPGVLGHPGP---QGPKGQKGSVGEPGMEGPMGQKGR--EGPMGPRGE 635

Query: 206 GGNAGLAVGREAGQRRKRGEPGAGGARGLP 117
            G  G     E G R   GEPG  G  G+P
Sbjct: 636 PGPPGFG---EKGDRGAAGEPGVQGPPGVP 662

---

>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor|
          Length = 1366

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 35/114 (30%), Positives = 47/114 (41%), Gaps = 6/114 (5%)
 Frame = -3

Query: 368  GGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXX-XRLTGGH*HHVPREPFAEGGNAG 192
            G DGQ GH+    +P       +  +G +G  G       TG H +     P    G  G
Sbjct: 937  GRDGQAGHKGERGYP-----GNIGPVGAVGAPGPHGPVGPTGKHGNRGEPGPAGSVGPVG 991

Query: 191  LAVGREA-----GQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDR 45
             AVG        G R  +GEPG  G RGLP +   +  +G +   G    HGD+
Sbjct: 992  -AVGPRGPSGPQGIRGDKGEPGEKGPRGLPGL---KGHNGLQGLPGLAGQHGDQ 1041



 Score = 31.2 bits (69), Expect = 1.0
 Identities = 34/111 (30%), Positives = 40/111 (36%), Gaps = 9/111 (8%)
 Frame = -3

Query: 422 GXPVDCRYYSAGAPHAERGGDGQRG---------HRVLVSHPVPLLFQGVKQLGKLGVFG 270
           G P +        P  ERG  G+ G          R     P P   +G  + G LG  G
Sbjct: 574 GLPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGSRGPSGPPGPDGNKG--EPGVLGAPG 631

Query: 269 QXXXRLTGGH*HHVPREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLP 117
                  GG    +P E  A G   G     E G R + G PG  GARG P
Sbjct: 632 TAGASGPGG----LPGERGAAGIPGGKGEKGETGLRGEIGNPGRDGARGAP 678



 Score = 28.5 bits (62), Expect = 6.7
 Identities = 32/97 (32%), Positives = 38/97 (39%)
 Frame = -3

Query: 374 ERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPFAEGGNA 195
           ERG  G +G R     P    F+G++  G  G+ G        G    V  EP A G N 
Sbjct: 155 ERGVVGPQGARGFPGTPGLPGFKGIR--GHNGLDGLKGQPGAPG----VKGEPGAPGENG 208

Query: 194 GLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGA 84
                   GQ   RG PG  G  G P  A  R  DG+
Sbjct: 209 ------TPGQTGARGLPGERGRVGAPGPAGARGSDGS 239

---

>COHA1_HUMAN (Q9UMD9) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen|
           2) (180 kDa bullous pemphigoid antigen 2)
          Length = 1497

 Score = 33.1 bits (74), Expect = 0.27
 Identities = 30/90 (33%), Positives = 35/90 (38%), Gaps = 1/90 (1%)
 Frame = -3

Query: 383 PHAERGGDGQRGHRVLVSHPVPLLFQGVK-QLGKLGVFGQXXXRLTGGH*HHVPREPFAE 207
           P  +RG  G  G    + HP P   QG K Q G +G  G        G        P   
Sbjct: 580 PKGDRGFPGTPGIPGPLGHPGP---QGPKGQKGSVGDPGMEGPMGQRGR-----EGPMGP 631

Query: 206 GGNAGLAVGREAGQRRKRGEPGAGGARGLP 117
            G AG     E G+R   GEPG  G  G+P
Sbjct: 632 RGEAGPPGSGEKGERGAAGEPGPHGPPGVP 661

---

>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor|
          Length = 1763

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 2/88 (2%)
 Frame = -3

Query: 374 ERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPFAEGGNA 195
           +RG  GQ G R       P    G+  +G  G  G+   R   G     P  P    G  
Sbjct: 196 DRGDVGQAGPRGPPGEAGPPGNPGIGSIGPKGDPGEQGPRGPQG-----PPGPVPSTGAK 250

Query: 194 GLAVGREA--GQRRKRGEPGAGGARGLP 117
           G  +G E   G + ++G+PG  G RG P
Sbjct: 251 GTIIGPEGAPGMKGEKGDPGEAGPRGFP 278

---

>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2|
          Length = 1033

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 22/58 (37%), Positives = 25/58 (43%)
 Frame = -3

Query: 218 PFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDR 45
           PF  GGNAG+A        R +G P  GG  G P       G G R     G+G G R
Sbjct: 222 PFTSGGNAGMA---RPSAPRPQGGPRPGGPGGAP-------GGGPRPQGPGGQGGGPR 269

---

>CO6A3_CHICK (P15989) Collagen alpha-3(VI) chain precursor|
          Length = 3137

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
 Frame = -3

Query: 392  AGAPHAERGGDGQRGHRVLVSHPVPLLFQGVKQ-LGKLGVFGQXXXRLTGGH*HHVPREP 216
            +GA + +RG  GQ+G    +  P P   +G    +G+ G+ G+              R P
Sbjct: 2165 SGADNTQRGTRGQKGEIGQMGEPGPAGQRGQDGGVGRKGMAGR--------------RGP 2210

Query: 215  FAEGGNAGLAVGRE--AGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDR 45
                G  G A+G+   AG++  RG  G  G  G P +  ++   G R   G     G+R
Sbjct: 2211 IGVKGTKG-ALGQPGPAGEQGMRGPQGPPGQIGTPGIRGEQGIPGPRAGGGQPGAPGER 2268

---

>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor|
          Length = 1806

 Score = 32.3 bits (72), Expect = 0.46
 Identities = 31/94 (32%), Positives = 36/94 (38%), Gaps = 7/94 (7%)
 Frame = -3

Query: 383  PHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFG-------QXXXRLTGGH*HHVP 225
            P  E G +G +G       P P    G K  GKLGV G       Q     TG      P
Sbjct: 806  PRGEDGPEGPKGRAGPTGDPGPSGQAGEK--GKLGVPGLPGYPGRQGPKGSTG-----FP 858

Query: 224  REPFAEGGNAGLAVGREAGQRRKRGEPGAGGARG 123
              P A G      V  + G R +RG  G  G+RG
Sbjct: 859  GFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRG 892



 Score = 31.6 bits (70), Expect = 0.79
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -3

Query: 170 GQRRKRGEPGAGGARGL---PDVACDRRGDGARCWAGDGRGHGDR 45
           G+  KRG PGA G RG+   P    DR  DG     GD    G+R
Sbjct: 574 GKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGER 618



 Score = 28.5 bits (62), Expect = 6.7
 Identities = 34/96 (35%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
 Frame = -3

Query: 395  SAGAPHAER--GGDGQRGHRVLVSHPVPLLFQGVK-QLGKLGVFGQXXXRLTGGH*HHVP 225
            +AG P A+   G DG +G+      P P+ F G     G+LG  GQ       G     P
Sbjct: 1289 AAGPPGAKGPPGDDGPKGN------PGPVGFPGDPGPPGELGPAGQDGVGGDKGE-DGDP 1341

Query: 224  REPFAEG--GNAGLAVGREAGQRRKRGEPGAGGARG 123
             +P   G  G AG       G   KRG PGA GA G
Sbjct: 1342 GQPGPPGPSGEAG-----PPGPPGKRGPPGAAGAEG 1372



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 32/125 (25%), Positives = 45/125 (36%), Gaps = 1/125 (0%)
 Frame = -3

Query: 383  PHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFG-QXXXRLTGGH*HHVPREPFAE 207
            P   +G DG RG +          F G K  G +G+ G +      G      P  P   
Sbjct: 761  PRGVKGADGVRGLKGSKGEKGEDGFPGFK--GDMGLKGDRGEVGQIGPRGEDGPEGPKGR 818

Query: 206  GGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLRSVY 27
             G  G     + G   + GE G  G  GLP     +   G+  + G    +G++  R V 
Sbjct: 819  AGPTG-----DPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVA 873

Query: 26   VSPPP 12
              P P
Sbjct: 874  GKPGP 878

---

>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor|
          Length = 1464

 Score = 32.3 bits (72), Expect = 0.46
 Identities = 35/117 (29%), Positives = 39/117 (33%), Gaps = 13/117 (11%)
 Frame = -3

Query: 374  ERGGDGQRGHRVLVSHPVPLLFQGVK-------------QLGKLGVFGQXXXRLTGGH*H 234
            ERG +G +GHR    +P P    G                 G +G  G      T G  H
Sbjct: 1098 ERGSNGIKGHRGFPGNPGPPGSPGAAGHQGAIGSPGPAGPRGPVGPHGPPGKDGTSG--H 1155

Query: 233  HVPREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDG 63
              P  P    GN G     E G     G PG  G  G P       G GA   AG G
Sbjct: 1156 PGPIGPPGPRGNRG-----ERGSEGSPGHPGQPGPPGPPGAPGPCCGGGAAAIAGVG 1207



 Score = 32.0 bits (71), Expect = 0.61
 Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = -3

Query: 221 EPFAEG--GNAGL-AVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
           EP A G  G AG   +    G+  K G PG  GA GLP  A +R   G R  AG     G
Sbjct: 441 EPGARGERGEAGSPGIPGPKGEDGKDGSPGEPGANGLPGAAGERGPSGFRGPAGPNGIPG 500

Query: 50  DR 45
           ++
Sbjct: 501 EK 502



 Score = 28.9 bits (63), Expect = 5.1
 Identities = 28/87 (32%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
 Frame = -3

Query: 371  RGGDGQRGHRVLVSHPVPLLFQGVK-QLGKLGVFGQXXXRLTGGH*HHVPREPFAEGGNA 195
            RGG G+RG       P P  F G   Q G+ G  G+      G      P  P    G++
Sbjct: 793  RGGPGERGEH---GPPGPAGFPGAPGQNGEPGAKGERGA--PGEKGEGGPPGPAGPTGSS 847

Query: 194  GLA-VGREAGQRRKRGEPGAGGARGLP 117
            G A      G + +RG PG  G  G P
Sbjct: 848  GPAGPPGPQGVKGERGSPGGPGTAGFP 874



 Score = 28.9 bits (63), Expect = 5.1
 Identities = 32/108 (29%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
 Frame = -3

Query: 395 SAGAPHAERGGDGQRGHRVLVSHPVPLLFQGVK----QLGKLGVFGQXXXRLTGGH*HHV 228
           S G+P  +RG  G +GH      P P    G      ++G  G+ G     L G      
Sbjct: 360 SNGSP-GQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGEMGPAGIPG--APGLIGA----- 411

Query: 227 PREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGA 84
            R P    G  G+      G R   GEPG  GA+G P    +R   G+
Sbjct: 412 -RGPPGPAGTNGIP-----GTRGPSGEPGKNGAKGEPGARGERGEAGS 453



 Score = 28.9 bits (63), Expect = 5.1
 Identities = 15/30 (50%), Positives = 15/30 (50%)
 Frame = -3

Query: 170 GQRRKRGEPGAGGARGLPDVACDRRGDGAR 81
           G    RG PG  G  GLP  A  R  DGAR
Sbjct: 296 GPMGPRGAPGERGRPGLPGAAGARGNDGAR 325



 Score = 28.5 bits (62), Expect = 6.7
 Identities = 30/98 (30%), Positives = 35/98 (35%)
 Frame = -3

Query: 374 ERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPFAEGGNA 195
           ERGG G  G +     P      GV   GK G  G              P  P    G A
Sbjct: 729 ERGGPGSPGPKGEKGEPGGAGADGVP--GKDGPRG--------------PAGPIGPPGPA 772

Query: 194 GLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGAR 81
           G           + G+ G GG+ GLP +A  R G G R
Sbjct: 773 G-----------QPGDKGEGGSPGLPGIAGPRGGPGER 799

---

>CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor|
          Length = 920

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -3

Query: 230 VPREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLP 117
           +P EP A+G           G + ++GEPG  GARGLP
Sbjct: 316 LPGEPGADGLTGPDGSPGATGPKGQKGEPGPPGARGLP 353

---

>VNUA_PRVKA (P33485) Probable nuclear antigen|
          Length = 1733

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 38/125 (30%), Positives = 45/125 (36%), Gaps = 7/125 (5%)
 Frame = -3

Query: 404  RYYSAGAPHAERGGDGQRGHRVLVSHPVPLLFQG--VKQLGKLGVFGQXXXRLTGGH*HH 231
            R   AG    ERG     G R  V H   ++  G  +   G  G+ G+      GG    
Sbjct: 1345 RRVGAGPGLPERGEQRPVGRRGPVGHEREVVVGGAALPARGPGGLRGRGRGGRGGG---- 1400

Query: 230  VPREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVAC-----DRRGDGARCWAGD 66
                    GG  G       G+RR+R  PGAG     PD          RG G R   G 
Sbjct: 1401 --------GGGGGRGPRGRGGRRRRRWRPGAGEWGAGPDSFVFFSLGGGRGRGGRGGRG- 1451

Query: 65   GRGHG 51
            GRG G
Sbjct: 1452 GRGRG 1456

---

>COBA1_BOVIN (Q28083) Collagen alpha-1(XI) chain precursor (Fragment)|
          Length = 911

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 31/94 (32%), Positives = 36/94 (38%), Gaps = 7/94 (7%)
 Frame = -3

Query: 383 PHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFG-------QXXXRLTGGH*HHVP 225
           P  E G +G +G       P P    G K  GKLGV G       Q     TG      P
Sbjct: 573 PRGEDGPEGPKGRAGPTGDPGPPGQAGEK--GKLGVPGLPGYPGRQGPKGSTG-----FP 625

Query: 224 REPFAEGGNAGLAVGREAGQRRKRGEPGAGGARG 123
             P A G      V  + G R +RG  G  G+RG
Sbjct: 626 GFPGANGEKGARGVAGKPGPRGQRGPTGPRGSRG 659



 Score = 31.6 bits (70), Expect = 0.79
 Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = -3

Query: 170 GQRRKRGEPGAGGARGL---PDVACDRRGDGARCWAGDGRGHGDR 45
           G+  KRG PGA G RG+   P    DR  DG     GD    G+R
Sbjct: 341 GKPGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGER 385



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 32/125 (25%), Positives = 45/125 (36%), Gaps = 1/125 (0%)
 Frame = -3

Query: 383 PHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFG-QXXXRLTGGH*HHVPREPFAE 207
           P   +G DG RG +          F G K  G +G+ G +      G      P  P   
Sbjct: 528 PRGVKGADGVRGLKGSKGEKGEDGFPGFK--GDMGLKGDRGEVGQVGPRGEDGPEGPKGR 585

Query: 206 GGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLRSVY 27
            G  G     + G   + GE G  G  GLP     +   G+  + G    +G++  R V 
Sbjct: 586 AGPTG-----DPGPPGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGVA 640

Query: 26  VSPPP 12
             P P
Sbjct: 641 GKPGP 645

---

>AP1G2_MOUSE (O88512) AP-1 complex subunit gamma-2 (Adapter-related protein|
           complex 1 gamma-2 subunit) (Gamma2-adaptin) (Adaptor
           protein complex AP-1 gamma-2 subunit) (G2ad)
          Length = 791

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = -3

Query: 389 GAPHAERGGDGQR--GHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREP 216
           G PH + GG  ++     + V+ P P   Q  K L  L + G     L+ GH  H+P + 
Sbjct: 591 GDPHVKEGGKEKQTEAQPLEVTAPAPTEPQATKLLDLLDLLGDTSEPLSSGHAQHLPPQT 650

Query: 215 FAEG 204
            + G
Sbjct: 651 PSPG 654

---

>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor|
          Length = 1804

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 30/94 (31%), Positives = 36/94 (38%), Gaps = 7/94 (7%)
 Frame = -3

Query: 383  PHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFG-------QXXXRLTGGH*HHVP 225
            P  E G +G +G       P P    G K  GKLGV G       Q     TG      P
Sbjct: 804  PRGEDGPEGPKGRAGPTGDPGPSGQAGEK--GKLGVPGLPGYPGRQGPKGSTG-----FP 856

Query: 224  REPFAEGGNAGLAVGREAGQRRKRGEPGAGGARG 123
              P A G      +  + G R +RG  G  G+RG
Sbjct: 857  GFPGANGEKGARGIAGKPGPRGQRGPTGPRGSRG 890



 Score = 31.6 bits (70), Expect = 0.79
 Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = -3

Query: 170 GQRRKRGEPGAGGARGLPDVA---CDRRGDGARCWAGDGRGHGDR 45
           G+  KRG PGA G RG+P  +    DR  DG     GD    G+R
Sbjct: 572 GKPGKRGRPGADGGRGMPGESGSKGDRGFDGLPGLPGDKGHRGER 616



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 31/125 (24%), Positives = 45/125 (36%), Gaps = 1/125 (0%)
 Frame = -3

Query: 383  PHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFG-QXXXRLTGGH*HHVPREPFAE 207
            P   +G DG RG +          F G K  G +G+ G +      G      P  P   
Sbjct: 759  PRGVKGADGVRGLKGSKGEKGEDGFPGFK--GDMGLKGDRGEVGQVGPRGEDGPEGPKGR 816

Query: 206  GGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLRSVY 27
             G  G     + G   + GE G  G  GLP     +   G+  + G    +G++  R + 
Sbjct: 817  AGPTG-----DPGPSGQAGEKGKLGVPGLPGYPGRQGPKGSTGFPGFPGANGEKGARGIA 871

Query: 26   VSPPP 12
              P P
Sbjct: 872  GKPGP 876

---

>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor|
          Length = 1736

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 35/120 (29%), Positives = 48/120 (40%), Gaps = 4/120 (3%)
 Frame = -3

Query: 356 QRGHRVLVSHPVPLLFQG----VKQLGKLGVFGQXXXRLTGGH*HHVPREPFAEGGNAGL 189
           Q+    L   P P+ + G    + Q G  G+ G+       G     PR P    G+ G 
Sbjct: 479 QQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQG-----PRGPQGLTGSLG- 532

Query: 188 AVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLRSVYVSPPPP 9
               +AG+R + G  GA G  G P V  DR  DG     G+    GD   + +   P PP
Sbjct: 533 ----KAGRRGRAGADGARGMPGDPGVKGDRGFDGLPGLPGEKGHRGDTGAQGL---PGPP 585

---

>CO5A1_RAT (Q9JI03) Collagen alpha-1(V) chain precursor|
          Length = 1840

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 38/129 (29%), Positives = 46/129 (35%), Gaps = 4/129 (3%)
 Frame = -3

Query: 383  PHAERGGDGQRGHRVLVSHPVPLLFQGVK----QLGKLGVFGQXXXRLTGGH*HHVPREP 216
            P  E G  GQ+G+      P P    G       LGK G+ G        GH       P
Sbjct: 715  PQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGH-PGKEGPP 773

Query: 215  FAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLR 36
              +GG          G    RG  GA G RGL     ++  DG   + GD    GDR   
Sbjct: 774  GEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDR--- 830

Query: 35   SVYVSPPPP 9
               + PP P
Sbjct: 831  -GEIGPPGP 838



 Score = 29.6 bits (65), Expect = 3.0
 Identities = 34/107 (31%), Positives = 40/107 (37%), Gaps = 8/107 (7%)
 Frame = -3

Query: 383  PHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHV--PREPFA 210
            P  E G +G +G       P PL   G K  GKLGV G        G    +  P  P A
Sbjct: 838  PRGEDGPEGPKGRGGPNGDPGPLGPTGEK--GKLGVPGLPGYPGRQGPKGSIGFPGFPGA 895

Query: 209  EGGNAGLAVGREAGQRRKRG------EPGAGGARGLPDVACDRRGDG 87
             G   G     + G R +RG      E G  G  G P    +  GDG
Sbjct: 896  NGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDG 942



 Score = 29.3 bits (64), Expect = 3.9
 Identities = 34/128 (26%), Positives = 46/128 (35%)
 Frame = -3

Query: 392 AGAPHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPF 213
           +G    E G  G +G R +   P P         GK G  G+       G    +P +  
Sbjct: 580 SGGLKGEPGDMGPQGPRGVQGPPGPT--------GKPGRRGRAGSDGARG----MPGQTG 627

Query: 212 AEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLRS 33
            +G      +    G++  RG+PG  G  GLP    +R  DG     G     G R L  
Sbjct: 628 PKGDRGFDGLAGLPGEKGHRGDPGPSGPPGLPGDDGERGDDGEVGPRGLPGEPGPRGLLG 687

Query: 32  VYVSPPPP 9
               P PP
Sbjct: 688 PKGPPGPP 695

---

>CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor|
          Length = 1840

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 38/129 (29%), Positives = 46/129 (35%), Gaps = 4/129 (3%)
 Frame = -3

Query: 383  PHAERGGDGQRGHRVLVSHPVPLLFQGVK----QLGKLGVFGQXXXRLTGGH*HHVPREP 216
            P  E G  GQ+G+      P P    G       LGK G+ G        GH       P
Sbjct: 715  PQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGH-PGKEGPP 773

Query: 215  FAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLR 36
              +GG          G    RG  GA G RGL     ++  DG   + GD    GDR   
Sbjct: 774  GEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDR--- 830

Query: 35   SVYVSPPPP 9
               + PP P
Sbjct: 831  -GEIGPPGP 838



 Score = 29.6 bits (65), Expect = 3.0
 Identities = 34/107 (31%), Positives = 40/107 (37%), Gaps = 8/107 (7%)
 Frame = -3

Query: 383  PHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHV--PREPFA 210
            P  E G +G +G       P PL   G K  GKLGV G        G    +  P  P A
Sbjct: 838  PRGEDGPEGPKGRGGPNGDPGPLGPTGEK--GKLGVPGLPGYPGRQGPKGSIGFPGFPGA 895

Query: 209  EGGNAGLAVGREAGQRRKRG------EPGAGGARGLPDVACDRRGDG 87
             G   G     + G R +RG      E G  G  G P    +  GDG
Sbjct: 896  NGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDG 942



 Score = 29.3 bits (64), Expect = 3.9
 Identities = 34/128 (26%), Positives = 46/128 (35%)
 Frame = -3

Query: 392 AGAPHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPF 213
           +G    E G  G +G R +   P P         GK G  G+       G    +P +  
Sbjct: 580 SGGLKGEPGDMGPQGPRGVQGPPGPT--------GKPGRRGRAGSDGARG----MPGQTG 627

Query: 212 AEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLRS 33
            +G      +    G++  RG+PG  G  GLP    +R  DG     G     G R L  
Sbjct: 628 PKGDRGFDGLAGLPGEKGHRGDPGPSGPPGLPGDDGERGDDGEVGPRGLPGEPGPRGLLG 687

Query: 32  VYVSPPPP 9
               P PP
Sbjct: 688 PKGPPGPP 695

---

>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor|
          Length = 1372

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 31/112 (27%), Positives = 39/112 (34%), Gaps = 10/112 (8%)
 Frame = -3

Query: 422 GXPVDCRYYSAGAPHAERGGDGQRGHRVLVSHPVPLLFQGVK----------QLGKLGVF 273
           G P +        P  ERG  G+ G         P+  +G            + G +G  
Sbjct: 580 GLPGEFGLPGPAGPRGERGPPGESG---AAGPSGPIGIRGPSGAPGPDGNKGEAGAVGAP 636

Query: 272 GQXXXRLTGGH*HHVPREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLP 117
           G       GG    +P E  A G   G     E G R + G PG  GARG P
Sbjct: 637 GSAGASGPGG----LPGERGAAGIPGGKGEKGETGLRGEIGNPGRDGARGAP 684



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 35/114 (30%), Positives = 45/114 (39%), Gaps = 6/114 (5%)
 Frame = -3

Query: 368  GGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFG-QXXXRLTGGH*HHVPREPFAEGGNAG 192
            G DGQ GH+    +P       +   G  G  G        G H +     P    G  G
Sbjct: 943  GRDGQPGHKGERGYP-----GNIGPTGAAGAPGPHGSVGPAGKHGNRGEPGPAGSVGPVG 997

Query: 191  LAVGREA-----GQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDR 45
             AVG        G R  +GEPG  GARGLP +   +  +G +   G    HGD+
Sbjct: 998  -AVGPRGPSGPQGIRGDKGEPGDKGARGLPGL---KGHNGLQGLPGLAGLHGDQ 1047



 Score = 28.9 bits (63), Expect = 5.1
 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = -3

Query: 227 PREPFAEGGNAGLAVGR----EAGQRRKRGEPGAGGARGLP 117
           P  P  E GN G    +    + G+  ++G PG  GARG P
Sbjct: 488 PAGPRGEAGNIGFPGPKGPSGDPGKPGEKGHPGLAGARGAP 528



 Score = 28.9 bits (63), Expect = 5.1
 Identities = 31/104 (29%), Positives = 38/104 (36%), Gaps = 1/104 (0%)
 Frame = -3

Query: 368 GGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPFAEGGNAGL 189
           G  G  G R LV  P P   +G  + G  G                   EP + G     
Sbjct: 340 GAAGATGPRGLVGEPGPAGSKG--ETGNKG-------------------EPGSAGAQGPP 378

Query: 188 AVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAG-DGR 60
               E G+R   GEPG+ G  G P +   R   G+R   G DGR
Sbjct: 379 GPSGEEGKRGSPGEPGSAGPAGPPGL---RGSPGSRGLPGADGR 419



 Score = 28.5 bits (62), Expect = 6.7
 Identities = 32/98 (32%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
 Frame = -3

Query: 374 ERGGDGQRGHRVLVSHPVPLLFQGVKQLGKL-GVFGQXXXRLTGGH*HHVPREPFAEGGN 198
           ERG  G +G R     P    F+G++    L G+ GQ   +   G       EP A G N
Sbjct: 161 ERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAQGVKG-------EPGAPGEN 213

Query: 197 AGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGA 84
                    GQ   RG PG  G  G P  A  R  DG+
Sbjct: 214 G------TPGQAGARGLPGERGRVGAPGPAGARGSDGS 245

---

>CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor|
          Length = 1838

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 38/129 (29%), Positives = 46/129 (35%), Gaps = 4/129 (3%)
 Frame = -3

Query: 383  PHAERGGDGQRGHRVLVSHPVPLLFQGVK----QLGKLGVFGQXXXRLTGGH*HHVPREP 216
            P  E G  GQ+G+      P P    G       LGK G+ G        GH       P
Sbjct: 713  PQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGH-PGKEGPP 771

Query: 215  FAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLR 36
              +GG          G    RG  GA G RGL     ++  DG   + GD    GDR   
Sbjct: 772  GEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDR--- 828

Query: 35   SVYVSPPPP 9
               + PP P
Sbjct: 829  -GEIGPPGP 836



 Score = 29.6 bits (65), Expect = 3.0
 Identities = 34/107 (31%), Positives = 40/107 (37%), Gaps = 8/107 (7%)
 Frame = -3

Query: 383  PHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHV--PREPFA 210
            P  E G +G +G       P PL   G K  GKLGV G        G    +  P  P A
Sbjct: 836  PRGEDGPEGPKGRGGPNGDPGPLGPTGEK--GKLGVPGLPGYPGRQGPKGSIGFPGFPGA 893

Query: 209  EGGNAGLAVGREAGQRRKRG------EPGAGGARGLPDVACDRRGDG 87
             G   G     + G R +RG      E G  G  G P    +  GDG
Sbjct: 894  NGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDG 940



 Score = 28.5 bits (62), Expect = 6.7
 Identities = 33/128 (25%), Positives = 46/128 (35%)
 Frame = -3

Query: 392 AGAPHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPF 213
           +G    E G  G +G R +   P P         GK G  G+       G    +P +  
Sbjct: 578 SGGLKGEPGDMGPQGPRGVQGPPGPT--------GKPGRRGRAGSDGARG----MPGQTG 625

Query: 212 AEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLRS 33
            +G      +    G++  RG+PG  G  G+P    +R  DG     G     G R L  
Sbjct: 626 PKGDRGFDGLAGLPGEKGHRGDPGPSGPPGIPGDDGERGDDGEVGPRGLPGEPGPRGLLG 685

Query: 32  VYVSPPPP 9
               P PP
Sbjct: 686 PKGPPGPP 693

---

>CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor|
          Length = 1838

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 38/129 (29%), Positives = 46/129 (35%), Gaps = 4/129 (3%)
 Frame = -3

Query: 383  PHAERGGDGQRGHRVLVSHPVPLLFQGVK----QLGKLGVFGQXXXRLTGGH*HHVPREP 216
            P  E G  GQ+G+      P P    G       LGK G+ G        GH       P
Sbjct: 713  PQGEPGPPGQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGH-PGKEGPP 771

Query: 215  FAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLR 36
              +GG          G    RG  GA G RGL     ++  DG   + GD    GDR   
Sbjct: 772  GEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDR--- 828

Query: 35   SVYVSPPPP 9
               + PP P
Sbjct: 829  -GEIGPPGP 836



 Score = 29.6 bits (65), Expect = 3.0
 Identities = 34/107 (31%), Positives = 40/107 (37%), Gaps = 8/107 (7%)
 Frame = -3

Query: 383  PHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHV--PREPFA 210
            P  E G +G +G       P PL   G K  GKLGV G        G    +  P  P A
Sbjct: 836  PRGEDGPEGPKGRGGPNGDPGPLGPPGEK--GKLGVPGLPGYPGRQGPKGSIGFPGFPGA 893

Query: 209  EGGNAGLAVGREAGQRRKRG------EPGAGGARGLPDVACDRRGDG 87
             G   G     + G R +RG      E G  G  G P    +  GDG
Sbjct: 894  NGEKGGRGTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDG 940

---

>PG03_MYCTU (P56877) Hypothetical PE-PGRS family protein PE_PGRS3 precursor|
          Length = 957

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 30/91 (32%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
 Frame = -3

Query: 290 GKLGVFGQXXXRLTGGH*HHVPREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDV 111
           G  G  G       GGH           GGNAGL     +G     G  G+GGA  L   
Sbjct: 749 GAAGSGGSGITTGGGGH-----------GGNAGLLSLGASG-----GAGGSGGASSLAGG 792

Query: 110 ACDRRGDGARCW----AGDGRGHGDRCLRSV 30
           A    G+GA  +    AG   GHG   L S+
Sbjct: 793 AGGTGGNGALLFGFRGAGGAGGHGGAALTSI 823

---

>CO6A1_HUMAN (P12109) Collagen alpha-1(VI) chain precursor|
          Length = 1028

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 36/94 (38%), Positives = 43/94 (45%)
 Frame = -3

Query: 389 GAPHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPFA 210
           GAP  ERGG G+RG R     P P   +G    G+ G  G        G    VP +P  
Sbjct: 419 GAP-GERGGPGERGPR---GTPGPRGPRG--DPGEAGPQGDQGREGPVG----VPGDP-- 466

Query: 209 EGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVA 108
             G AG  +G + G R   G PG+ GARG P  A
Sbjct: 467 --GEAG-PIGPK-GYRGDEGPPGSEGARGAPGPA 496

---

>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor|
          Length = 1364

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 36/114 (31%), Positives = 46/114 (40%), Gaps = 6/114 (5%)
 Frame = -3

Query: 368  GGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFG-QXXXRLTGGH*HHVPREPFAEGGNAG 192
            G DGQ GH+    +P          +G  G  G Q      G H +     P    G AG
Sbjct: 935  GRDGQPGHKGERGYP-----GNAGPVGAAGAPGPQGPVGPVGKHGNRGEPGPAGAVGPAG 989

Query: 191  LAVGREA-----GQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDR 45
             AVG        G R  +GEPG  G RGLP +   +  +G +   G    HGD+
Sbjct: 990  -AVGPRGPSGPQGIRGDKGEPGDKGPRGLPGL---KGHNGLQGLPGLAGHHGDQ 1039



 Score = 28.5 bits (62), Expect = 6.7
 Identities = 32/97 (32%), Positives = 38/97 (39%)
 Frame = -3

Query: 374 ERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPFAEGGNA 195
           ERG  G +G R     P    F+G++  G  G+ G        G    V  EP A G N 
Sbjct: 153 ERGVVGPQGARGFPGTPGLPGFKGIR--GHNGLDGLKGQPGAPG----VKGEPGAPGENG 206

Query: 194 GLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGA 84
                   GQ   RG PG  G  G P  A  R  DG+
Sbjct: 207 ------TPGQTGARGLPGERGRVGAPGPAGARGSDGS 237



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 22/59 (37%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
 Frame = -3

Query: 209 EGGNAGLAVGR----EAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDR 45
           E G AG+  G+    E G R   G PG  GARG P         GA    G    +GDR
Sbjct: 642 ERGAAGIPGGKGEKGETGLRGDIGSPGRDGARGAP---------GAIGAPGPAGANGDR 691

---

>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 20/51 (39%), Positives = 24/51 (47%)
 Frame = -3

Query: 221 EPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAG 69
           EP A G         E G+R  RGEPG  G  G P    +R G G+R + G
Sbjct: 439 EPGATGVQGPPGPAGEEGKRGARGEPGPSGLPGPPG---ERGGPGSRGFPG 486



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 35/110 (31%), Positives = 41/110 (37%), Gaps = 5/110 (4%)
 Frame = -3

Query: 383 PHAERGGDGQRGHRVLVSHPVPLLFQGVKQL-GKLGVFG----QXXXRLTGGH*HHVPRE 219
           P  + G DG+ G         P   QG + L G  G+ G    +    L G      P  
Sbjct: 214 PPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAG 273

Query: 218 PFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAG 69
           P  E G+ G       GQ   RG PG  G  G P  A  R  DGA   AG
Sbjct: 274 PKGEPGSPG--ENGAPGQMGPRGLPGERGRPGPPGTAGARGNDGAVGAAG 321



 Score = 30.0 bits (66), Expect = 2.3
 Identities = 35/126 (27%), Positives = 47/126 (37%), Gaps = 1/126 (0%)
 Frame = -3

Query: 383  PHAERGGDGQRGHRVLVSHPVPLLFQGVKQL-GKLGVFGQXXXRLTGGH*HHVPREPFAE 207
            P  E G  G++G    +  P P   +G +   G+ GV G        G+ +  P    A+
Sbjct: 640  PPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGN-NGAPGNDGAK 698

Query: 206  GGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLRSVY 27
            G           G    +G PG  GA GLP    DR   G +   G     G R L    
Sbjct: 699  GDTGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGARGLTGP- 757

Query: 26   VSPPPP 9
            + PP P
Sbjct: 758  IGPPGP 763



 Score = 30.0 bits (66), Expect = 2.3
 Identities = 22/60 (36%), Positives = 29/60 (48%)
 Frame = -3

Query: 227 PREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGD 48
           P  P  + G+ G A   + G+  +RG PG  GARGLP  A      G R ++G     GD
Sbjct: 211 PPGPPGKNGDDGEA--GKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGD 268

---

>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor|
          Length = 1464

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 35/110 (31%), Positives = 41/110 (37%), Gaps = 5/110 (4%)
 Frame = -3

Query: 383 PHAERGGDGQRGHRVLVSHPVPLLFQGVKQL-GKLGVFG----QXXXRLTGGH*HHVPRE 219
           P  + G DG+ G         P   QG + L G  G+ G    +    L G      P  
Sbjct: 225 PPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAG 284

Query: 218 PFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAG 69
           P  E G+ G       GQ   RG PG  G  G P  A  R  DGA   AG
Sbjct: 285 PKGEPGSPG--ENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAG 332



 Score = 30.0 bits (66), Expect = 2.3
 Identities = 22/60 (36%), Positives = 29/60 (48%)
 Frame = -3

Query: 227 PREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGD 48
           P  P  + G+ G A   + G+  +RG PG  GARGLP  A      G R ++G     GD
Sbjct: 222 PPGPPGKNGDDGEA--GKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGD 279



 Score = 29.6 bits (65), Expect = 3.0
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -3

Query: 173 AGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAG 69
           AG+  KRG  G  G  GLP    +R G G+R + G
Sbjct: 463 AGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPG 497



 Score = 28.5 bits (62), Expect = 6.7
 Identities = 29/103 (28%), Positives = 39/103 (37%)
 Frame = -3

Query: 392 AGAPHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPF 213
           A  P    G  G+RG +     P    FQG+   G  G  G+               +P 
Sbjct: 618 AQGPPGPAGPAGERGEQGPAGSPG---FQGLP--GPAGPPGEAG-------------KPG 659

Query: 212 AEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGA 84
            +G    L     +G R +RG PG  G +G P  A  R  +GA
Sbjct: 660 EQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGA 702

---

>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor|
          Length = 1460

 Score = 31.6 bits (70), Expect = 0.79
 Identities = 35/110 (31%), Positives = 41/110 (37%), Gaps = 5/110 (4%)
 Frame = -3

Query: 383 PHAERGGDGQRGHRVLVSHPVPLLFQGVKQL-GKLGVFG----QXXXRLTGGH*HHVPRE 219
           P  + G DG+ G         P   QG + L G  G+ G    +    L G      P  
Sbjct: 221 PPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAG 280

Query: 218 PFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAG 69
           P  E G+ G       GQ   RG PG  G  G P  A  R  DGA   AG
Sbjct: 281 PKGEPGSPG--ENGAPGQMGPRGLPGERGRPGAPGPAGARGNDGATGAAG 328



 Score = 30.0 bits (66), Expect = 2.3
 Identities = 22/60 (36%), Positives = 29/60 (48%)
 Frame = -3

Query: 227 PREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGD 48
           P  P  + G+ G A   + G+  +RG PG  GARGLP  A      G R ++G     GD
Sbjct: 218 PPGPPGKNGDDGEA--GKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGD 275



 Score = 29.6 bits (65), Expect = 3.0
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -3

Query: 173 AGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAG 69
           AG+  KRG  G  G  GLP    +R G G+R + G
Sbjct: 459 AGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPG 493



 Score = 28.5 bits (62), Expect = 6.7
 Identities = 29/103 (28%), Positives = 39/103 (37%)
 Frame = -3

Query: 392 AGAPHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPF 213
           A  P    G  G+RG +     P    FQG+   G  G  G+               +P 
Sbjct: 614 AQGPPGPAGPAGERGEQGPAGSPG---FQGLP--GPAGPPGEAG-------------KPG 655

Query: 212 AEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGA 84
            +G    L     +G R +RG PG  G +G P  A  R  +GA
Sbjct: 656 EQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGA 698

---

>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)|
          Length = 169

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 17/55 (30%), Positives = 24/55 (43%)
 Frame = -3

Query: 215 FAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
           ++ GG  G + G   G  R+ G  G+GG  G        R +G     GDG  +G
Sbjct: 109 YSGGGGGGYSGGGGGGYERRSGGYGSGGGGGGRGYGGGGRREGGGYGGGDGGSYG 163

---

>COHA1_CHICK (Q90584) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen|
           2) (180 kDa bullous pemphigoid antigen 2) (Fragment)
          Length = 1146

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 37/94 (39%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
 Frame = -3

Query: 374 ERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPFAEGGNA 195
           E G  G +G +     P P   QG K  G  G+ G+   R   G     P EP A+G  A
Sbjct: 273 EAGLPGAKGEKGATGPPGPKGDQGEK--GAHGMTGEQGSRGIPGP----PGEPGAKGP-A 325

Query: 194 GLAVGREAGQRRKRGEPGA---GGARGLPDVACD 102
           G A GR+ GQ  +RGEPG     GARG P  + D
Sbjct: 326 GQA-GRD-GQPGERGEPGLMGIPGARGPPGPSGD 357

---

>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor|
          Length = 1366

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 35/114 (30%), Positives = 45/114 (39%), Gaps = 6/114 (5%)
 Frame = -3

Query: 368  GGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXX-XRLTGGH*HHVPREPFAEGGNAG 192
            G DGQ GH+    +P       +  +G  G  G        G H +     P    G AG
Sbjct: 937  GRDGQPGHKGERGYP-----GNIGPVGAAGAPGPHGPVGPAGKHGNRGETGPSGPVGPAG 991

Query: 191  LAVGREA-----GQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDR 45
             AVG        G R  +GEPG  G RGLP     +  +G +   G    HGD+
Sbjct: 992  -AVGPRGPSGPQGIRGDKGEPGEKGPRGLPGF---KGHNGLQGLPGIAGHHGDQ 1041



 Score = 28.5 bits (62), Expect = 6.7
 Identities = 32/97 (32%), Positives = 38/97 (39%)
 Frame = -3

Query: 374 ERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPFAEGGNA 195
           ERG  G +G R     P    F+G++  G  G+ G        G    V  EP A G N 
Sbjct: 155 ERGVVGPQGARGFPGTPGLPGFKGIR--GHNGLDGLKGQPGAPG----VKGEPGAPGENG 208

Query: 194 GLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGA 84
                   GQ   RG PG  G  G P  A  R  DG+
Sbjct: 209 ------TPGQTGARGLPGERGRVGAPGPAGARGSDGS 239

---

>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 31.2 bits (69), Expect = 1.0
 Identities = 21/60 (35%), Positives = 26/60 (43%)
 Frame = -3

Query: 227 PREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGD 48
           P  P   G N       + G+  +RG PG  GARGLP  A      G R ++G     GD
Sbjct: 209 PGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGD 268



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 35/110 (31%), Positives = 41/110 (37%), Gaps = 5/110 (4%)
 Frame = -3

Query: 383 PHAERGGDGQRGHRVLVSHPVPLLFQGVKQL-GKLGVFG----QXXXRLTGGH*HHVPRE 219
           P  + G DG+ G         P   QG + L G  G+ G    +    L G      P  
Sbjct: 214 PPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDTGPAG 273

Query: 218 PFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAG 69
           P  E G+ G       GQ   RG PG  G  G P  A  R  DGA   AG
Sbjct: 274 PKGEPGSPG--ENGTPGQMGPRGLPGERGRPGPPGTAGARGNDGAVGAAG 321



 Score = 29.6 bits (65), Expect = 3.0
 Identities = 35/126 (27%), Positives = 47/126 (37%), Gaps = 1/126 (0%)
 Frame = -3

Query: 383  PHAERGGDGQRGHRVLVSHPVPLLFQGVKQL-GKLGVFGQXXXRLTGGH*HHVPREPFAE 207
            P  E G  G++G    +  P P   +G +   G+ GV G        G+ +  P    A+
Sbjct: 640  PPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGN-NGAPGNDGAK 698

Query: 206  GGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLRSVY 27
            G           G    +G PG  GA GLP    DR   G +   G     G R L    
Sbjct: 699  GDTGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGP- 757

Query: 26   VSPPPP 9
            + PP P
Sbjct: 758  IGPPGP 763



 Score = 29.6 bits (65), Expect = 3.0
 Identities = 19/51 (37%), Positives = 23/51 (45%)
 Frame = -3

Query: 221 EPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAG 69
           EP   G         E G+R  RGEPG  G  G P    +R G G+R + G
Sbjct: 439 EPGPAGVQGPPGPAGEEGKRGARGEPGPSGLPGPPG---ERGGPGSRGFPG 486

---

>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor|
          Length = 1372

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 34/98 (34%), Positives = 39/98 (39%), Gaps = 1/98 (1%)
 Frame = -3

Query: 374 ERGGDGQRGHRVLVSHPVPLLFQGVK-QLGKLGVFGQXXXRLTGGH*HHVPREPFAEGGN 198
           ERG  G +G R     P    F+GVK   G  G+ GQ   +   G       EP A G N
Sbjct: 161 ERGVVGPQGARGFPGTPGLPGFKGVKGHSGMDGLKGQPGAQGVKG-------EPGAPGEN 213

Query: 197 AGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGA 84
                    GQ   RG PG  G  G P  A  R  DG+
Sbjct: 214 G------TPGQAGARGLPGERGRVGAPGPAGARGSDGS 245



 Score = 30.0 bits (66), Expect = 2.3
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
 Frame = -3

Query: 227 PREPFAEGGNAGLAVGR----EAGQRRKRGEPGAGGARGLP 117
           P  P  E GN G    +    + G+  +RG PG  GARG P
Sbjct: 488 PAGPRGEAGNIGFPGPKGPSGDPGKPGERGHPGLAGARGAP 528



 Score = 29.6 bits (65), Expect = 3.0
 Identities = 32/111 (28%), Positives = 39/111 (35%), Gaps = 9/111 (8%)
 Frame = -3

Query: 422 GXPVDCRYYSAGAPHAERGGDGQRG---------HRVLVSHPVPLLFQGVKQLGKLGVFG 270
           G P +        P  ERG  G+ G          R     P P   +G  + G +G  G
Sbjct: 580 GLPGEFGLPGPAGPRGERGTPGESGAAGPSGPIGSRGPSGAPGPDGNKG--EAGAVGAPG 637

Query: 269 QXXXRLTGGH*HHVPREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLP 117
                  GG    +P E  A G   G     E G R   G  G  GARG+P
Sbjct: 638 SAGASGPGG----LPGERGAAGIPGGKGEKGETGLRGDTGNTGRDGARGIP 684

---

>PG54_MYCTU (O53553) Hypothetical PE-PGRS family protein PE_PGRS54 precursor|
          Length = 1901

 Score = 30.8 bits (68), Expect = 1.4
 Identities = 20/52 (38%), Positives = 25/52 (48%)
 Frame = -3

Query: 206  GGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
            GGNAG+ +  +AG     G  G GGA G    A D   +G +  AG   G G
Sbjct: 1079 GGNAGVGLTAKAGDGGAAGNGGNGGAGGAGG-AGDNNFNGGQGGAGGQGGQG 1129



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 20/52 (38%), Positives = 25/52 (48%)
 Frame = -3

Query: 206  GGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
            GGNAG+ +  +AG     G  G GGA G    A D   +G +  AG   G G
Sbjct: 878  GGNAGVGLTAKAGDGGAAGNGGNGGAGGAGG-AGDNNFNGGQGGAGGQGGQG 928



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/48 (35%), Positives = 19/48 (39%)
 Frame = -3

Query: 206  GGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDG 63
            GG   L VG   G     G+ G+GG  G    A    G G     GDG
Sbjct: 1158 GGAGTLGVGGSGGTGGDGGDAGSGGGGGFGGAAGKAGGGGNGGVGGDG 1205



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/48 (35%), Positives = 19/48 (39%)
 Frame = -3

Query: 206  GGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDG 63
            GG   L VG   G     G+ G+GG  G    A    G G     GDG
Sbjct: 957  GGAGTLGVGGSGGTGGDGGDAGSGGGGGFGGAAGKAGGGGNGGRGGDG 1004

---

>PIN4_MOUSE (Q9CWW6) Peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 (EC|
           5.2.1.8) (Rotamase Pin4) (PPIase Pin4)
          Length = 131

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -3

Query: 209 EGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRG 93
           +GG  G A G ++  ++ +G  G G A  +  + C++ G
Sbjct: 11  KGGKGGAASGSDSADKKSQGPKGGGNAVKVRHILCEKHG 49

---

>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor|
          Length = 1745

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 31/101 (30%), Positives = 43/101 (42%), Gaps = 15/101 (14%)
 Frame = -3

Query: 374  ERGGDGQRGHRVLVSHPVPLLFQGVK----QLGKLGVFGQXXXRLTGGH*HHVPREPFAE 207
            ++G DG RG   ++  P     QG+     + G++G  G       G H    PR P   
Sbjct: 1131 QKGDDGVRGFVGVIGPPG---LQGLPGPPGEKGEVGDVGSM-----GPHGAPGPRGPQGP 1182

Query: 206  GGNAGL-----------AVGREAGQRRKRGEPGAGGARGLP 117
             G+ G            AVG E G+R   G+PG  GA G+P
Sbjct: 1183 TGSEGTPGLPGGVGQPGAVG-EKGERGDAGDPGPPGAPGIP 1222



 Score = 30.4 bits (67), Expect = 1.8
 Identities = 35/111 (31%), Positives = 40/111 (36%), Gaps = 8/111 (7%)
 Frame = -3

Query: 392  AGAPHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHV----P 225
            A  P  E G +G +G         P    G K  GKLGV G        G    +    P
Sbjct: 753  APGPRGEDGPEGPKGQAGQAGEEGPPGSAGEK--GKLGVPGLPGYPGRPGPKGSIGFPGP 810

Query: 224  REPFAEGGNAGLA----VGREAGQRRKRGEPGAGGARGLPDVACDRRGDGA 84
              P  E G +G      +  E G    RGE G  GA G P    D   DGA
Sbjct: 811  LGPIGEKGKSGKTGQPGLEGERGPPGSRGERGQPGATGQPGPKGDVGQDGA 861



 Score = 28.5 bits (62), Expect = 6.7
 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = -3

Query: 170 GQRRKRGEPGAGGARGLP---DVACDRRGDGARCWAGDGRGHGD 48
           G+  K G PGA GARGLP       DR  DG     G+    GD
Sbjct: 524 GRVGKMGRPGADGARGLPGDTGPKGDRGFDGLPGLPGEKGQRGD 567

---

>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor|
          Length = 1496

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 36/112 (32%), Positives = 41/112 (36%)
 Frame = -3

Query: 383 PHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPFAEG 204
           P+   G  G RG R     P P  FQG    G  G  G+       G    VP  P A G
Sbjct: 649 PYGPPGPPGLRGERGEQGPPGPTGFQG--HPGPPGPPGEGGKPGDQG----VPGGPGAVG 702

Query: 203 GNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGD 48
               L    E G   +RGEPG  G  G   +A     DG +   G     GD
Sbjct: 703 P---LGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGD 751



 Score = 30.0 bits (66), Expect = 2.3
 Identities = 33/125 (26%), Positives = 42/125 (33%)
 Frame = -3

Query: 383  PHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPFAEG 204
            P  ERG  G+RG   +   P           G+ G        + GGH    P+      
Sbjct: 706  PRGERGNPGERGEPGITGLP-----------GEKG--------MAGGHGPDGPKGSPGPS 746

Query: 203  GNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLRSVYV 24
            G  G     + G    +G PG  G  G P    DR G G +   G     G   L    +
Sbjct: 747  GTPG-----DTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGAGGLPGP-L 800

Query: 23   SPPPP 9
             PP P
Sbjct: 801  GPPGP 805



 Score = 29.3 bits (64), Expect = 3.9
 Identities = 36/107 (33%), Positives = 41/107 (38%), Gaps = 10/107 (9%)
 Frame = -3

Query: 380  HAERGGDGQRGHR------VLVSHPVPLLFQGVKQLGKLGVFGQXX----XRLTGGH*HH 231
            H +RG  GQ+GHR       L   P P   QG    G  G FG          +G   + 
Sbjct: 1130 HGDRGDRGQKGHRGFTGLQGLPGPPGPNGEQG--SAGIPGPFGPRGPPGPVGPSGKEGNP 1187

Query: 230  VPREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGD 90
             P  P    G  G +VG EAG     GEPG  G  G P       GD
Sbjct: 1188 GPLGPLGPPGVRG-SVG-EAGPEGPPGEPGPPGPPGPPGHLTAALGD 1232

---

>CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragments)|
          Length = 747

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 33/93 (35%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
 Frame = -3

Query: 392 AGAPHAERGGDGQRGHRVLVSHPVPLLFQGVK-QLGKLGVFGQXXXRLTGGH*HHVPREP 216
           AGA     G  G RG       P P  FQG   + G+ GV G    R   G     P +P
Sbjct: 11  AGAAMGVMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGP----PGKP 66

Query: 215 FAEGGNAGLAVGREAGQRRKRGEPGAGGARGLP 117
             + G AG     + G+  +RG PG  GARG P
Sbjct: 67  -GDDGEAG-----KPGKSGERGPPGPQGARGFP 93



 Score = 30.0 bits (66), Expect = 2.3
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -3

Query: 227 PREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGAR 81
           P  P  + G  G+A  +  G++  +GEPG  G +G P  A +    GAR
Sbjct: 263 PLGPKGQTGEPGIAGFK--GEQGPKGEPGPAGVQGAPGPAGEEGKRGAR 309



 Score = 29.6 bits (65), Expect = 3.0
 Identities = 38/111 (34%), Positives = 44/111 (39%), Gaps = 2/111 (1%)
 Frame = -3

Query: 395 SAGAPHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXX-RLTGGH*HHVPR- 222
           SAGAP    G  G  G R     P P   QG    G LG  GQ     + G      P+ 
Sbjct: 236 SAGAPGIA-GAPGFPGPR---GPPGP---QGAT--GPLGPKGQTGEPGIAGFKGEQGPKG 286

Query: 221 EPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAG 69
           EP   G         E G+R  RGEPG  G  G P    +R   G+R + G
Sbjct: 287 EPGPAGVQGAPGPAGEEGKRGARGEPGGAGPAGPPG---ERGAPGSRGFPG 334

---

>IF2_SYMTH (Q67P86) Translation initiation factor IF-2|
          Length = 1044

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -3

Query: 230 VPREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGAR 81
           VP +P A GG +GL +    G++   G  G G   GLP      +G  AR
Sbjct: 312 VPVKP-AAGGKSGLGLPTRPGEKAADGARGGGSGIGLPVKPAAGQGTAAR 360



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = -3

Query: 248 GGH*HHVPREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLP 117
           GG    +P +P A  G A  A G    Q+ K G P  GG  G P
Sbjct: 341 GGSGIGLPVKPAAGQGTAARAGGLGLPQKPKAGAPRPGGGLGAP 384

---

>GRP2_PHAVU (P10496) Glycine-rich cell wall structural protein 1.8 precursor|
           (GRP 1.8)
          Length = 465

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 34/123 (27%), Positives = 39/123 (31%), Gaps = 6/123 (4%)
 Frame = -3

Query: 398 YSAGAPHAERGGDGQRG-----HRVLVSHPVPLLF-QGVKQLGKLGVFGQXXXRLTGGH* 237
           Y AG  H   GG GQ G     +  +  H       QG    G  G  G+      GG  
Sbjct: 309 YGAGGEHGGGGGGGQGGGAGGGYAAVGEHGGGYGGGQGGGDGGGYGTGGEHGGGYGGGQ- 367

Query: 236 HHVPREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRG 57
                     G   G   G E G     G+ G GG     D      G G     G G G
Sbjct: 368 --------GGGAGGGYGTGGEHGGGYGGGQGGGGGYGAGGDHGAAGYGGGEGGGGGSGGG 419

Query: 56  HGD 48
           +GD
Sbjct: 420 YGD 422

---

>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)|
          Length = 1027

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
 Frame = -3

Query: 368 GGDGQRGHRVLVSHPVPLLFQGVKQL-GKLGVFGQXXXRLTGGH*HHVPREPFAEG--GN 198
           G +G+ G       P P  F G + + G  G  GQ   +  GG      R P A G  G+
Sbjct: 223 GANGEPGASGESGLPGPSGFPGPRGMPGTAGSPGQAGAKGDGGPTGEQGR-PGAPGVKGS 281

Query: 197 AG----LAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGAR 81
           +G    +     AG+  KRG PG+ G  G P    DR   G+R
Sbjct: 282 SGPPGDVGAPGHAGEAGKRGSPGSPGPAGSPGPQGDRGLPGSR 324



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 26/85 (30%), Positives = 33/85 (38%), Gaps = 13/85 (15%)
 Frame = -3

Query: 224 REPFAEGGNAG----LAVGREAGQRRKRGEPGAGGARGLPD-----VACDRRGD----GA 84
           R P   GG+ G    +    +AG+R K GE G  G  GLP       +   RGD    G 
Sbjct: 564 RGPKGVGGSKGSRGDIGPRGKAGERGKDGERGERGENGLPGPSGLAASKGERGDMGSPGE 623

Query: 83  RCWAGDGRGHGDRCLRSVYVSPPPP 9
           R   G     G    + +   P PP
Sbjct: 624 RGSPGPAGERGPAGSQGIQGQPGPP 648

---

>PRD13_HUMAN (Q9H4Q3) PR domain zinc finger protein 13 (PR domain-containing|
           protein 13)
          Length = 717

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 25/74 (33%), Positives = 30/74 (40%), Gaps = 2/74 (2%)
 Frame = -3

Query: 224 REPFAEGGNAGLAVGREAGQRRKRGEPGAG--GARGLPDVACDRRGDGARCWAGDGRGHG 51
           RE  +    AGLA+GR  G  R  G PG+G   A G         G G          H 
Sbjct: 323 REESSSKQGAGLALGRLLGGGRACGRPGSGENSAAG---------GAGHHHHHHAHHHHH 373

Query: 50  DRCLRSVYVSPPPP 9
            +CL +    PPPP
Sbjct: 374 PKCLLAGDPPPPPP 387

---

>FIBH_BOMMO (P05790) Fibroin heavy chain precursor (Fib-H) (H-fibroin)|
          Length = 5263

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 19/52 (36%), Positives = 20/52 (38%)
 Frame = -3

Query: 206  GGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
            G  AG   G  AG     G  GAG   G    A    G G+   AG G G G
Sbjct: 4089 GAGAGYGAGVGAGYGAGYGGAGAGYGAGAGSGAASGAGAGSGAGAGSGAGAG 4140



 Score = 28.9 bits (63), Expect = 5.1
 Identities = 20/55 (36%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
 Frame = -3

Query: 212  AEGGNAGLAVGREAGQRRKRGE-PGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
            A G  AG   G  AG     G   GAG   G    A    G G+   AG G G G
Sbjct: 2534 ASGAGAGSGAGAGAGSGAGAGSGAGAGSGAGAGSGAGSGAGAGSGAGAGSGAGAG 2588



 Score = 28.9 bits (63), Expect = 5.1
 Identities = 21/56 (37%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
 Frame = -3

Query: 215  FAEGGNAGLAVGREAGQRRKRGE-PGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
            F  G  AG   G  AG     G   GAG   G    A    G GA   AG G G+G
Sbjct: 1848 FGTGSGAGAGSGAGAGSGAGAGSGAGAGSGAGAGSGAGAGSGAGAGYGAGVGAGYG 1903



 Score = 28.5 bits (62), Expect = 6.7
 Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
 Frame = -3

Query: 215 FAEGGNAGLAVGREAGQRRKRGE-PGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
           +  G  +G A G  AG     G   GAG   G    A    G GA   AG G G+G
Sbjct: 491 YGAGAGSGAASGAGAGSGAGAGSGAGAGSGAGAGSGAGAGSGAGAGYGAGAGAGYG 546



 Score = 28.5 bits (62), Expect = 6.7
 Identities = 21/54 (38%), Positives = 22/54 (40%)
 Frame = -3

Query: 212 AEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
           A G  AG   G  AG     G  GAG   G    A    G GA   AG G G+G
Sbjct: 174 ASGAGAGAGAGAGAGYGTGAGA-GAGAGYGAGAGAGAGAGYGAGAGAGAGAGYG 226



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
 Frame = -3

Query: 215  FAEGGNAGLAVGREAGQRRKRGE-PGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
            +  G  +G A G  AG     G   GAG   G    A    G G+   AG G G G
Sbjct: 4249 YGAGAGSGAASGAGAGSGAGAGSGAGAGSGAGAGSGAGSGAGAGSGAGAGSGAGAG 4304



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 19/54 (35%), Positives = 22/54 (40%)
 Frame = -3

Query: 212  AEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
            A G  AG   G  AG     G  GAG   G    +    G GA   +G G G+G
Sbjct: 3113 ASGAGAGSGAGAGAGSGAGAGS-GAGAGSGAGAGSGAGAGSGAGAGSGAGAGYG 3165



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 20/56 (35%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
 Frame = -3

Query: 215  FAEGGNAGLAVGREAGQRRKRGE-PGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
            +  G  +G A G  AG     G   GAG   G    A    G GA   AG G G+G
Sbjct: 2459 YGAGAGSGAASGAGAGSGAGAGSGAGAGSGAGAGSGAGAGSGAGAGYGAGVGAGYG 2514

---

>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor|
          Length = 1463

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 27/86 (31%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
 Frame = -3

Query: 371  RGGDGQRGHRVLVSHPVPLLFQGVK-QLGKLGVFGQXXXRLTGGH*HHVPREPFAEGGNA 195
            RGG G+RG       P P  F G   Q G+ G  G+       G     P      GG+ 
Sbjct: 793  RGGPGERGEH---GPPGPAGFPGAPGQNGEPGAKGERGAPGEKGE-GGPPGAAGPPGGSG 848

Query: 194  GLAVGREAGQRRKRGEPGAGGARGLP 117
                    G + +RG PG  GA G P
Sbjct: 849  PAGPPGPQGVKGERGSPGGPGAAGFP 874



 Score = 29.6 bits (65), Expect = 3.0
 Identities = 31/98 (31%), Positives = 35/98 (35%)
 Frame = -3

Query: 374 ERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPFAEGGNA 195
           ERGG G  G +     P      GV   GK G  G              P  P    G A
Sbjct: 729 ERGGPGSPGPKGEKGEPGGAGADGVP--GKDGPRG--------------PAGPIGPPGPA 772

Query: 194 GLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGAR 81
           G           + G+ G GGA GLP +A  R G G R
Sbjct: 773 G-----------QPGDKGEGGAPGLPGIAGPRGGPGER 799



 Score = 29.6 bits (65), Expect = 3.0
 Identities = 22/62 (35%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
 Frame = -3

Query: 221 EPFAEG--GNAGL-AVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
           EP A G  G AG   +    G+  K G PG  GA G+P    +R   G R  AG     G
Sbjct: 441 EPGARGERGEAGSPGIPGPKGEDGKDGSPGEPGANGVPGNPGERGAPGFRGPAGPNGAPG 500

Query: 50  DR 45
           ++
Sbjct: 501 EK 502



 Score = 29.3 bits (64), Expect = 3.9
 Identities = 31/108 (28%), Positives = 40/108 (37%), Gaps = 4/108 (3%)
 Frame = -3

Query: 395 SAGAPHAERGGDGQRGHRVLVSHPVPLLFQGVK----QLGKLGVFGQXXXRLTGGH*HHV 228
           S G+P  +RG  G +GH      P P    G      ++G  G+ G        G     
Sbjct: 360 SNGSP-GQRGEPGPQGHAGAQGPPGPPGNNGSPGGKGEMGPAGIPGAPGLLGARG----- 413

Query: 227 PREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGA 84
              P   G N         GQR   GEPG  GA+G P    +R   G+
Sbjct: 414 --PPGPAGANGA------PGQRGPSGEPGKNGAKGEPGARGERGEAGS 453



 Score = 28.9 bits (63), Expect = 5.1
 Identities = 15/30 (50%), Positives = 15/30 (50%)
 Frame = -3

Query: 170 GQRRKRGEPGAGGARGLPDVACDRRGDGAR 81
           G    RG PG  G  GLP  A  R  DGAR
Sbjct: 296 GPMGPRGAPGERGRPGLPGAAGARGNDGAR 325



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 29/103 (28%), Positives = 38/103 (36%), Gaps = 1/103 (0%)
 Frame = -3

Query: 374  ERGGDGQRGHRVLVSHPVPLLFQGVK-QLGKLGVFGQXXXRLTGGH*HHVPREPFAEGGN 198
            ERG +G +GHR    +P P    G     G +G  G    R   G  H  P +  + G  
Sbjct: 1098 ERGSNGIKGHRGFPGNPGPPGSPGAAGHQGAVGSPGPAGPRGPVGP-HGPPGKDGSSGHP 1156

Query: 197  AGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAG 69
              +      G R +RG  G+ G  G P         G  C  G
Sbjct: 1157 GPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAPGPCCGGG 1199

---

>CO4A5_CANFA (Q28247) Collagen alpha-5(IV) chain precursor|
          Length = 1691

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = -3

Query: 248  GGH*HHVPREPFAEGGNAGL-AVGREAGQRRKRGEPGAG--GARGLPDVACDRRGDG 87
            GG     P  P  E GN G   +   AGQ+ + G+PG G  G  GLP ++  ++GDG
Sbjct: 1152 GGGGRPGPPGPPGEKGNPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGLS-GQKGDG 1207

---

>PKSL1_ASPPA (Q12053) Aflatoxin biosynthesis polyketide synthase (PKS)|
          Length = 2109

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 23/63 (36%), Positives = 30/63 (47%)
 Frame = -3

Query: 191  LAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLRSVYVSPPP 12
            + VG+ + QR + G PGAG   GL DV+ D   D A        G G + LR+      P
Sbjct: 1363 MQVGQYSMQRLRAGHPGAGAIDGLVDVS-DMVVDKALV----PHGKGPQLLRTTLTMEWP 1417

Query: 11   PLA 3
            P A
Sbjct: 1418 PKA 1420

---

>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)|
          Length = 779

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 22/60 (36%), Positives = 29/60 (48%)
 Frame = -3

Query: 227 PREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGD 48
           P  P  + G+ G A   + G+  +RG PG  GARGLP  A      G R ++G     GD
Sbjct: 60  PPGPPGKNGDDGEA--GKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGD 117



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 29/103 (28%), Positives = 38/103 (36%)
 Frame = -3

Query: 392 AGAPHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPF 213
           A  P    G  G+RG +     P    FQG+   G  G  G+               +P 
Sbjct: 183 AQGPPGPAGPAGERGEQGPAGSPG---FQGLP--GPAGPPGEAG-------------KPG 224

Query: 212 AEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGA 84
            +G    L     +G R +RG PG  G  G P  A  R  +GA
Sbjct: 225 EQGVPGDLGAPGPSGARGERGFPGERGVEGPPGPAGPRGANGA 267

---

>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor|
          Length = 1736

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 34/120 (28%), Positives = 47/120 (39%), Gaps = 4/120 (3%)
 Frame = -3

Query: 356 QRGHRVLVSHPVPLLFQG----VKQLGKLGVFGQXXXRLTGGH*HHVPREPFAEGGNAGL 189
           Q+    L   P P+ + G    + Q G  G+ G+       G     PR P    G  G 
Sbjct: 479 QQARLALRGPPGPMGYTGRPGPLGQPGSPGLKGESGDLGPQG-----PRGPQGLTGPPG- 532

Query: 188 AVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLRSVYVSPPPP 9
               +AG+R + G  GA G  G P +  DR  DG     G+    GD   + +   P PP
Sbjct: 533 ----KAGRRGRAGADGARGMPGEPGMKGDRGFDGLPGLPGEKGQRGDTGAQGL---PGPP 585

---

>IER5_HUMAN (Q5VY09) Immediate early response gene 5 protein|
          Length = 327

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 9/51 (17%)
 Frame = +1

Query: 166 CPA---SRPTANPALPPS------AKGSRGTWCQWPPVSRRRRWPKTPSLP 291
           CP    + P   PA PP       A G    W + PP + R  WP+T   P
Sbjct: 52  CPGLYLAGPAGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQP 102

---

>CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor|
          Length = 1712

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = -3

Query: 227 PREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLP 117
           P  P  E G  G  +G + G R   G PG  G +GLP
Sbjct: 763 PDGPPGERGLPGEVLGAQPGPRGDAGVPGQPGLKGLP 799

---

>PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10
          Length = 819

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 25/64 (39%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
 Frame = -3

Query: 227 PREPFAE--GGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRG-DGARCWAGDG-- 63
           P  PF    GG  G    R  G+  +RG PG  G  G+     D RG +G R   G G  
Sbjct: 719 PPPPFHRNRGGRGGEPGYRGRGRGGERGHPGRNGPYGMGH--GDHRGHEGHRGHGGHGDH 776

Query: 62  RGHG 51
           RGHG
Sbjct: 777 RGHG 780

---

>MSA2_PLAF2 (Q03646) Merozoite surface antigen 2 precursor (MSA-2)|
          Length = 347

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = -3

Query: 206 GGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
           G  AG   G  AG     G  G G   G  + A +  G+GA   AG+G G+G
Sbjct: 107 GNGAGNGAGNGAGNGAGNGA-GNGAGNGAGNGAGNGAGNGAVASAGNGAGNG 157



 Score = 29.3 bits (64), Expect = 3.9
 Identities = 19/52 (36%), Positives = 24/52 (46%)
 Frame = -3

Query: 206 GGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
           G  AG   G  AG     G  G G   G  + A +  G+GA   AG+G G+G
Sbjct: 83  GNGAGNGAGNGAGNGAGNGA-GNGAGNGAGNGAGNGAGNGAGNGAGNGAGNG 133

---

>AGOL_ARATH (Q9SJK3) Argonaute-like protein At2g27880|
          Length = 997

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -3

Query: 206 GGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDR 45
           GG+ G + GR  G+R  + +  + G    P +     G G    AG GRG+  R
Sbjct: 7   GGHGGASRGRGGGRRSDQRQDQSSGQVAWPGLQQSYGGRGGSVSAGRGRGNVGR 60

---

>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10|
          Length = 169

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 21/52 (40%), Positives = 21/52 (40%)
 Frame = -3

Query: 206 GGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
           GG  G   G   G R   G  G GG  G      DRRG G     G GRG G
Sbjct: 87  GGGGGGRGGGGYGGRGGGGYGGGGGGYG------DRRGGGGYGSGGGGRGGG 132

---

>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:|
           Chondrocalcin]
          Length = 1418

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -3

Query: 227 PREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGAR 81
           P  P  + G  G+A  +  G++  +GEPG  G +G P  A +    GAR
Sbjct: 379 PLGPKGQTGKPGIAGFK--GEQGPKGEPGPAGPQGAPGPAGEEGKRGAR 425



 Score = 28.5 bits (62), Expect = 6.7
 Identities = 26/89 (29%), Positives = 34/89 (38%)
 Frame = -3

Query: 383 PHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPFAEG 204
           P    G +G++G    V  P P    G +  G  G  G+     T G    +   P A+G
Sbjct: 724 PPGPAGANGEKGE---VGPPGPAGSAGAR--GAPGERGETGPPGTSG----IAGPPGADG 774

Query: 203 GNAGLAVGREAGQRRKRGEPGAGGARGLP 117
                    EAGQ+   G PG  G  G P
Sbjct: 775 QPGAKGEQGEAGQKGDAGAPGPQGPSGAP 803



 Score = 28.5 bits (62), Expect = 6.7
 Identities = 35/102 (34%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
 Frame = -3

Query: 422 GXPVDCRYYSAGAPHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGG 243
           G P       A  P  E G  G RG    V    P   +G    G  G  GQ    L G 
Sbjct: 402 GEPGPAGPQGAPGPAGEEGKRGARGEPGGVGPIGPPGERGAP--GNRGFPGQDG--LAG- 456

Query: 242 H*HHVPREPFAEGGNAGLAVGREA-GQRRKRGEPGAGGARGL 120
                P+    E G +GLA  + A G   + GEPG  GARGL
Sbjct: 457 -----PKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGARGL 493



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 31/92 (33%), Positives = 38/92 (41%), Gaps = 1/92 (1%)
 Frame = -3

Query: 389 GAPHAERGGDGQRGHRVLVSHPVPLLFQGVK-QLGKLGVFGQXXXRLTGGH*HHVPREPF 213
           G      G  G RG       P P  FQG   + G+ GV G    R   G     P +P 
Sbjct: 128 GVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGP----PGKP- 182

Query: 212 AEGGNAGLAVGREAGQRRKRGEPGAGGARGLP 117
            + G AG     + G+  +RG PG  GARG P
Sbjct: 183 GDDGEAG-----KPGKAGERGPPGPQGARGFP 209

---

>TB182_MOUSE (P58871) 182 kDa tankyrase 1-binding protein (Fragment)|
          Length = 909

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 17/44 (38%), Positives = 20/44 (45%)
 Frame = -3

Query: 182 GREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
           G EAG+  K  E G G A   PD+       GA C  G+ R  G
Sbjct: 444 GAEAGEFLKSRERGVGQADWTPDLGLRNMAPGAGCSPGEPRELG 487

---

>CO9A2_HUMAN (Q14055) Collagen alpha-2(IX) chain precursor|
          Length = 689

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 11/100 (11%)
 Frame = -3

Query: 383 PHAERGGDGQRGHRVLVSHP----VPLLFQGVKQLGKLGVFGQXXXR-----LTGGH*HH 231
           P    G  G  G +    HP    VP +   V Q+G  G  G+   +     +  GH   
Sbjct: 557 PPGPPGPPGYPGKQGPHGHPGPRGVPGIVGAVGQIGNTGPKGKRGEKGDPGEVGRGH-PG 615

Query: 230 VPREPFAEG--GNAGLAVGREAGQRRKRGEPGAGGARGLP 117
           +P  P   G  G  G A+  + G R   G PG  G  GLP
Sbjct: 616 MPGPPGIPGLPGRPGQAINGKDGDRGSPGAPGEAGRPGLP 655



 Score = 28.1 bits (61), Expect = 8.8
 Identities = 32/114 (28%), Positives = 46/114 (40%), Gaps = 9/114 (7%)
 Frame = -3

Query: 383 PHAERGGDGQRGHRVLVSHPVPLLFQGVK-QLGKLGVFG-QXXXRLTGGH*HHVPREPFA 210
           P    G  G +G R  V  P P   QG K + G  G+ G Q    + G         P  
Sbjct: 380 PQGIMGQKGDQGERGPVGQPGPQGRQGPKGEQGPPGIPGPQGLPGVKGDKGSPGKTGPRG 439

Query: 209 EGGNAGLA-VGREAGQRRKRGEPG------AGGARGLPDVACDRRGDGARCWAG 69
           + G+ G+A +  E G++ + GEPG        G  G P  + D    G + + G
Sbjct: 440 KVGDPGVAGLPGEKGEKGESGEPGPKGQQGVRGEPGYPGPSGDAGAPGVQGYPG 493

---

>MBD2_HUMAN (Q9UBB5) Methyl-CpG-binding domain protein 2 (Methyl-CpG-binding|
           protein MBD2) (Demethylase) (DMTase)
          Length = 411

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 20/52 (38%), Positives = 23/52 (44%)
 Frame = -3

Query: 206 GGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
           G   G   GR  G+ R RG P +GG+ GL        GDG  C  G   G G
Sbjct: 77  GRGRGRGRGRGRGRGRGRGRPPSGGS-GL-------GGDGGGCGGGGSGGGG 120

---

>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)|
           (IER 2.9/ER2.6)
          Length = 676

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 23/54 (42%), Positives = 25/54 (46%)
 Frame = -3

Query: 206 GGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDR 45
           GG AG A G EAG        GAGGA    + A + RG GA   AG   G   R
Sbjct: 113 GGEAGAAGGSEAG-------GGAGGA----EAAGEARGAGAGRAAGAAGGRAGR 155

---

>CYLC1_HUMAN (P35663) Cylicin-1 (Cylicin I) (Multiple-band polypeptide I)|
          Length = 651

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +1

Query: 181 PTANPALPPSAKGSRGTWCQWPPVSRRRRWPKTPSLP 291
           P   P+LP S K  R  WC+ PP   + R+   P  P
Sbjct: 610 PACEPSLP-SPKVRRLCWCKMPPPPPKPRYAPLPEAP 645

---

>COLQ_TORMA (Q03637) Acetylcholinesterase collagenic tail peptide precursor|
           (AChE Q subunit)
          Length = 471

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -3

Query: 176 EAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGD 66
           E G+  ++G PG  G RG+P   C     G R   GD
Sbjct: 143 EIGRPGRKGRPGVRGPRGMPGSPCSPGPIGPRGEKGD 179

---

>CO9A1_HUMAN (P20849) Collagen alpha-1(IX) chain precursor|
          Length = 921

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = -3

Query: 221 EPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGD 66
           EP  +G         E G+   +G PGA G RG+  +  D+   GAR   G+
Sbjct: 440 EPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIVGDKGEKGARGLDGE 491

---

>CO1A2_ONCMY (O93484) Collagen alpha-2(I) chain precursor|
          Length = 1356

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 24/62 (38%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
 Frame = -3

Query: 218  PFAEGGNAGLAVGR-EAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDG-----RG 57
            P    G+AG    R E+G     G  GA GARG P  A  R   G     GD      RG
Sbjct: 959  PNGPAGSAGRPGNRGESGPTGNGGPVGAVGARGAPGPAGPRGEKGGAGEKGDRGMKGLRG 1018

Query: 56   HG 51
            HG
Sbjct: 1019 HG 1020



 Score = 28.9 bits (63), Expect = 5.1
 Identities = 35/119 (29%), Positives = 41/119 (34%), Gaps = 4/119 (3%)
 Frame = -3

Query: 392 AGAPHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPF 213
           AG     +G  G+ GHR L  +           +G+ G  G        G     P    
Sbjct: 641 AGGTPGPKGEKGEGGHRGLEGN-----------MGRDGARGGPGPSGPPG-----PSGAN 684

Query: 212 AEGGNAG-LAVGREAGQRRKRGEPGAGGARGLPDVACDRRGD---GARCWAGDGRGHGD 48
            E G +G       AG R   GE G GG  GLP  A     D   G R   G   G GD
Sbjct: 685 GEKGESGSFGPAGPAGLRGPSGERGEGGPAGLPGFAGPPGSDGQSGPRGEKGPAGGKGD 743



 Score = 28.5 bits (62), Expect = 6.7
 Identities = 18/44 (40%), Positives = 21/44 (47%)
 Frame = -3

Query: 176 EAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDR 45
           E+G    +GE GA GA G P  A  R  +G R  AG     G R
Sbjct: 185 ESGTAGAKGETGAHGANGSPGPAGSRGLNGERGRAGPAGPAGAR 228

---

>COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor|
          Length = 1603

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 33/117 (28%), Positives = 46/117 (39%), Gaps = 4/117 (3%)
 Frame = -3

Query: 386 APHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPFAE 207
           AP   +GG G+RG       P P    G K  G+ G  G    R++          P  E
Sbjct: 331 APSGPKGGKGERGL------PGP---PGSK--GEKGARGNDCVRISPDAPLQCAEGPKGE 379

Query: 206 GGNAGL----AVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGD 48
            G +G      +    G++ ++GE G GG +G+P     R   G  C  G     GD
Sbjct: 380 KGESGALGPSGLPGSTGEKGQKGEKGDGGIKGVPGKP-GRDAPGEICVIGPKGQKGD 435

---

>CO6A3_HUMAN (P12111) Collagen alpha-3(VI) chain precursor|
          Length = 3176

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = -3

Query: 173  AGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDR 45
            +GQR  RG  G+ G +G+P        DG R + GD  G G+R
Sbjct: 2037 SGQRGDRGPIGSIGPKGIPG------EDGYRGYPGDEGGPGER 2073

---

>FOXD2_HUMAN (O60548) Forkhead box protein D2 (Forkhead-related protein FKHL17)|
           (Forkhead-related transcription factor 9) (FREAC-9)
          Length = 497

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 29/74 (39%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
 Frame = -3

Query: 221 EPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDG---ARCWAGDGRG-- 57
           EP AE   A LA   E       GEP A  +RG    A    G G   AR  AG G G  
Sbjct: 57  EPPAEEAEADLAEDEEESGGCSDGEPRALASRGAA-AAAGSPGPGAAAARGAAGPGPGPP 115

Query: 56  HGDRCLRSVYVSPP 15
            G    RS  V PP
Sbjct: 116 SGGAATRSPLVKPP 129

---

>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor|
          Length = 1355

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 28/92 (30%), Positives = 34/92 (36%)
 Frame = -3

Query: 392 AGAPHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPF 213
           +G P  ERG  G +G R     P    F+G++  G  G  GQ                  
Sbjct: 141 SGRP-GERGPVGPQGARGFPGTPGLPGFKGIR--GHTGSDGQ------------------ 179

Query: 212 AEGGNAGLAVGREAGQRRKRGEPGAGGARGLP 117
            +G      V  E G     G PG  GARGLP
Sbjct: 180 -KGAPGAAGVKGENGANGDNGSPGQAGARGLP 210



 Score = 28.5 bits (62), Expect = 6.7
 Identities = 23/63 (36%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
 Frame = -3

Query: 227 PREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGD---GRG 57
           P  P   G N        AG     G PG  G RG+P  A      GAR  AGD     G
Sbjct: 288 PGNPGTNGVNGAKGT---AGLPGVGGAPGLPGGRGIPGPAGPAGPSGARGLAGDPGIAGG 344

Query: 56  HGD 48
            GD
Sbjct: 345 KGD 347

---

>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor|
          Length = 1453

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -3

Query: 173 AGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAG 69
           AG+  KRG  G  G  GLP  A +R   G+R + G
Sbjct: 452 AGEEGKRGARGEPGPAGLPGPAGERGAPGSRGFPG 486



 Score = 29.3 bits (64), Expect = 3.9
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = -3

Query: 227 PREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVA 108
           P  P  + G+ G A   + G+  +RG PG  GARGLP  A
Sbjct: 211 PAGPPGKNGDDGEA--GKPGRPGQRGPPGPQGARGLPGTA 248

---

>FBRL_CAEEL (Q22053) Fibrillarin|
          Length = 352

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 20/54 (37%), Positives = 21/54 (38%)
 Frame = -3

Query: 206 GGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDR 45
           GG  G   GR   +   RG  G GG  G         G G R     GRG GDR
Sbjct: 10  GGGGGFRGGRGGDRGGSRGGFGGGGRGGYGGGDRGSFGGGDRGGFRGGRGGGDR 63

---

>CO9A2_CHICK (P12108) Collagen alpha-2(IX) chain precursor|
          Length = 677

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -3

Query: 224 REPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDG 87
           R P    G AG     ++G + ++G PG  G +GLP V  D+   G
Sbjct: 391 RGPVGAPGEAG-----QSGPKGEQGPPGIPGPQGLPGVKGDKGSPG 431

---

>OTO1_ONCKE (P83371) Otolin-1 precursor|
          Length = 508

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 34/102 (33%), Positives = 38/102 (37%), Gaps = 9/102 (8%)
 Frame = -3

Query: 308 QGVK-QLGKLGVFGQXXXRLTG--------GH*HHVPREPFAEGGNAGLAVGREAGQRRK 156
           QG K  LGK+G  G     LTG        G     P     E G AGL      G R  
Sbjct: 248 QGEKGDLGKIGPAGPSG--LTGPMGQNGQKGEMGECPTGEKGEKGEAGLP--GPPGPRGL 303

Query: 155 RGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLRSV 30
            G PG  G  GLP     R   G+    G+  G G   LR +
Sbjct: 304 VGTPGVNGTNGLPGPVGLRGQLGSPGGKGEAGGRGPPGLRGM 345

---

>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog|
          Length = 342

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 6/58 (10%)
 Frame = -3

Query: 206 GGNAGLAVGREAGQRRKRGE------PGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
           GG  G+  G   G    RG+       G GG  G  D   + RG G   W G G G G
Sbjct: 196 GGRGGVGGGAGGGWGGGRGDWGGSAGGGGGGGWGGADPWENGRGGGGDRWGGGGGGMG 253

---

>RHLB_XANAC (Q8PFZ3) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)|
          Length = 571

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
 Frame = -3

Query: 230 VPREPFAEGGNAGLAVG---REAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAG-DG 63
           VP E      +AG +VG   REA ++R   E   GG RG P  +    G G R  AG DG
Sbjct: 399 VPVEGEEADDDAGDSVGTIFREAREQRAAEEQRRGGGRGGPGGSRSGSGGGRRDGAGADG 458

Query: 62  R 60
           +
Sbjct: 459 K 459

---

>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)|
           (IER 2.9/ER2.6)
          Length = 676

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 24/59 (40%), Positives = 26/59 (44%)
 Frame = -3

Query: 221 EPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDR 45
           E    GG AG A G EAG        GAGGA    + A + RG GA   AG   G   R
Sbjct: 108 EASGAGGEAGAADGSEAG-------GGAGGA----EEAGEARGAGAGRAAGAAGGRAGR 155

---

>COFA1_HUMAN (P39059) Collagen alpha-1(XV) chain precursor [Contains: Endostatin|
           (Endostatin-XV) (Restin) (Related to endostatin)]
          Length = 1388

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 22/67 (32%), Positives = 28/67 (41%)
 Frame = -3

Query: 209 EGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLRSV 30
           E G AG     E G     G+PG  GA GLP +  ++   G     G+    G+R L   
Sbjct: 650 EDGPAG-----EPGPPGPEGQPGVDGATGLPGMKGEKGARGPNGSVGEKGDPGNRGL--- 701

Query: 29  YVSPPPP 9
              P PP
Sbjct: 702 ---PGPP 705

---

>HXC12_HUMAN (P31275) Homeobox protein Hox-C12 (Hox-3F)|
          Length = 282

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 20/38 (52%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
 Frame = -3

Query: 224 REPFAEGGNAGLAVGREAGQRRKRG-EPGAG-GARGLP 117
           REP AEGG  GL       +R +RG +PGAG GA  LP
Sbjct: 96  REPCAEGGGGGL-------KREERGRDPGAGPGAALLP 126

---

>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor|
          Length = 1685

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
 Frame = -3

Query: 368  GGDGQRGHRVLVSHPVPLLFQGVK-QLGKLGVFGQXXXRLTGGH*HHVPREPFAEGGNAG 192
            G  GQ G       P P   +G+    G  G+ G+      GGH    P  P  +G    
Sbjct: 1113 GAKGQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQ-PGPPGEKGKPGQ 1171

Query: 191  LAVGREAGQRRKRGEPGAG--GARGLPDVACDRRGDG 87
              +   AGQ+ + G+PG G  G  GLP ++  ++GDG
Sbjct: 1172 DGIPGPAGQKGEPGQPGFGNPGPPGLPGLS-GQKGDG 1207

---

>CTAG2_HUMAN (O75638) Cancer/testis antigen 2 (L antigen family member 1)|
           (LAGE-1 protein) (ESO-2 protein)
          Length = 210

 Score = 28.9 bits (63), Expect = 5.1
 Identities = 24/57 (42%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
 Frame = -3

Query: 227 PREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGL-PDVACDRRGDGARCWAGDGR 60
           P  P   GGNAG     EAG    RG  GAG AR   P     R   G    A DGR
Sbjct: 21  PGIPDGPGGNAGGP--GEAGATGGRGPRGAGAARASGPRGGAPRGPHGGAASAQDGR 75

---

>K2C5_HUMAN (P13647) Keratin, type II cytoskeletal 5 (Cytokeratin-5) (CK-5)|
           (Keratin-5) (K5) (58 kDa cytokeratin)
          Length = 590

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 22/77 (28%), Positives = 29/77 (37%)
 Frame = -3

Query: 281 GVFGQXXXRLTGGH*HHVPREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACD 102
           G FG+       G   +  R  +  GG+  +++    G  R R   GAGG  G    A  
Sbjct: 44  GGFGRVSLAGACGVGGYGSRSLYNLGGSKRISISTRGGSFRNRFGAGAGGGYGFGGGAGS 103

Query: 101 RRGDGARCWAGDGRGHG 51
             G G     G G G G
Sbjct: 104 GFGFGGGAGGGFGLGGG 120

---

>CO9A1_MOUSE (Q05722) Collagen alpha-1(IX) chain precursor|
          Length = 921

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 16/52 (30%), Positives = 24/52 (46%)
 Frame = -3

Query: 221 EPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGD 66
           EP  +G         E G+   +G PG  G RG+  +  D+   GAR + G+
Sbjct: 440 EPGRQGHKGEEGDQGELGEVGAQGPPGPQGLRGITGIVGDKGEKGARGFDGE 491



 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -3

Query: 227 PREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLP 117
           P  P A+G           G R ++GEPG  G+RG P
Sbjct: 319 PGTPGADGLTGPDGSPGSVGPRGQKGEPGVPGSRGFP 355

---

>MSRE_MOUSE (P30204) Macrophage scavenger receptor types I and II (Macrophage|
           acetylated LDL receptor I and II) (Scavenger receptor
           type A) (SR-A)
          Length = 458

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 22/58 (37%), Positives = 27/58 (46%)
 Frame = -3

Query: 227 PREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGH 54
           P  P  E G+ GL      GQ    G PGA G RG+P V    +GD  +     GRG+
Sbjct: 278 PPGPQGEKGDRGLT-----GQT---GPPGAPGIRGIPGV----KGDRGQIGFPGGRGN 323

---

>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor|
          Length = 684

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 37/112 (33%), Positives = 46/112 (41%), Gaps = 4/112 (3%)
 Frame = -3

Query: 389 GAPHAERGGDGQRGHRVLVSHPVPLLFQGVK-QLGKLGVFGQXXXRLTGGH*HHVPREPF 213
           GAP  + G  G+RG         P  F+G K  LG+ G  G        G     P  P 
Sbjct: 259 GAP-GKAGDRGERG---------PEGFRGPKGDLGRPGPKGTPGVAGPSGE----PGMPG 304

Query: 212 AEGGNA--GLAVGR-EAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGD 66
            +G N   GL   + EAG+    GE G  G  GLP  A  +   G R  AG+
Sbjct: 305 KDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERGRAGE 356

---

>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)|
          Length = 1670

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 176  EAGQRRKRGEPGAGGARGLPDVACDRRGD 90
            E G +  +GEPG  G+ GLP +   +RGD
Sbjct: 1407 EKGNKGSKGEPGPAGSDGLPGLK-GKRGD 1434

---

>NONA_DROVI (Q9GRW7) Protein no-on-transient A|
          Length = 697

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
 Frame = -3

Query: 233 HVPREPF-AEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRG 57
           H   + F A GG  G   G   G     G  G GG  G  D   DRRG G       G G
Sbjct: 186 HAQNQAFRARGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRDRNPDRRGGGGGGGQNSGGG 245

Query: 56  HGDR 45
           +  +
Sbjct: 246 NNSQ 249

---

>OBSCN_HUMAN (Q5VST9) Obscurin (Obscurin-myosin light chain kinase)|
            (Obscurin-MLCK) (Obscurin-RhoGEF)
          Length = 7968

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +1

Query: 169  PASRPTA-NPALPPSAKGSRGTWCQWPPVSRRRRWPKTPSLPS 294
            PAS   A  P+LPP A         W  ++R+RR  + P+L S
Sbjct: 4715 PASVDEAPQPSLPPEAAQEGDLHLLWEALARKRRMSREPTLDS 4757

---

>CO4A2_MOUSE (P08122) Collagen alpha-2(IV) chain precursor|
          Length = 1707

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = -3

Query: 227 PREPFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLP 117
           P  P  + G  G  +G + G R   G PG  G +GLP
Sbjct: 758 PAGPPGDRGIPGEVLGAQPGTRGDAGLPGQPGLKGLP 794

---

>HMGYB_SOYBN (Q10370) HMG-Y-related protein B (SB16B protein) (Fragment)|
          Length = 152

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +1

Query: 169 PASRPTANPALPPSAKGSRGTWCQWPPVSRRRRWPKTPSLPS 294
           P  RP  +P  PP +  ++ T     P  R ++  ++P++PS
Sbjct: 84  PRGRPPKDPNAPPKSPKAKATPATGRPRGRPKKVARSPAVPS 125

---

>GDF7_MOUSE (P43029) Growth/differentiation factor 7 precursor (GDF-7)|
          Length = 461

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 21/58 (36%), Positives = 24/58 (41%), Gaps = 4/58 (6%)
 Frame = -3

Query: 206 GGNAGLAVGREAGQRRKR----GEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDR 45
           G  AG       G+RR+R    G  GA G+ G         G G     G GRGHG R
Sbjct: 298 GPGAGSRKANLGGRRRRRTALAGTRGAQGSGGGGGGGGGGGGGGGGGGGGAGRGHGRR 355

---

>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:|
            Chondrocalcin]
          Length = 1459

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 31/92 (33%), Positives = 37/92 (40%)
 Frame = -3

Query: 392  AGAPHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPF 213
            AGAP  E+G  G  G   L   P P    G  Q G +G+ GQ                  
Sbjct: 922  AGAP-GEKGEPGDDGPSGLDGPPGPQGLAG--QRGIVGLPGQR----------------- 961

Query: 212  AEGGNAGLAVGREAGQRRKRGEPGAGGARGLP 117
             E G  GL     +G+  K+G PGA G RG P
Sbjct: 962  GERGFPGLP--GPSGEPGKQGAPGASGDRGPP 991

---

>MBD2_MOUSE (Q9Z2E1) Methyl-CpG-binding domain protein 2 (Methyl-CpG-binding|
           protein MBD2)
          Length = 414

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 18/54 (33%), Positives = 22/54 (40%)
 Frame = -3

Query: 206 GGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDR 45
           G   G   GR  G+ R RG P +GG+     +  D  G    C  G G G   R
Sbjct: 77  GRGRGRGRGRGRGRGRGRGRPQSGGS----GLGGDGGGGAGGCGVGSGGGVAPR 126

---

>IE18_PRVIF (P11675) Immediate-early protein IE180|
          Length = 1461

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/41 (41%), Positives = 18/41 (43%)
 Frame = -1

Query: 124 AFPTSPAIGEATAPVAGQATVGAMEIDAFGQCTSRHHHHLR 2
           A P SPA G  +AP  G A  G       G    RHHH  R
Sbjct: 237 ASPASPAAGPVSAPGGGGAPSG-------GGDRGRHHHQHR 270

---

>CO6A2_MOUSE (Q02788) Collagen alpha-2(VI) chain precursor|
          Length = 1029

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 33/118 (27%), Positives = 41/118 (34%)
 Frame = -3

Query: 392 AGAPHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPF 213
           AG+P  ERG  G +G         P    G K  G  G  G           +  P  P 
Sbjct: 370 AGSP-GERGDQGAKGDSGRPGRRGPPGDPGDK--GSKGYQGN----------NGAPGSPG 416

Query: 212 AEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCL 39
            +GG  G       G+  +RG+PG  G  G          DG +   GD    G R L
Sbjct: 417 VKGGKGGPGPRGPKGEPGRRGDPGTKGGPG---------SDGPKGEKGDPGPEGPRGL 465

---

>CO4A1_DROME (P08120) Collagen alpha-1(IV) chain precursor|
          Length = 1775

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 37/122 (30%), Positives = 44/122 (36%), Gaps = 4/122 (3%)
 Frame = -3

Query: 398 YSAGAPHAERGGDGQRGHRVLVSHPVPLLFQGVKQLGKLGVFGQXXXRLTGGH*HHV--P 225
           Y A  P  E G  G++G       P+     G+K     G  G+          H V  P
Sbjct: 244 YGAKGPRGEHGLKGEKGASCY--GPMKPGAPGIK-----GEKGEPASSFPVKPTHTVMGP 296

Query: 224 REPFAEGGNAGLAVGR--EAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
           R    + G  GL VGR  E G     G  G  G +GLP    DR   G     G     G
Sbjct: 297 RGDMGQKGEPGL-VGRKGEPGPEGDTGLDGQKGEKGLPGGPGDRGRQGNFGPPGSTGQKG 355

Query: 50  DR 45
           DR
Sbjct: 356 DR 357

---

>IF2_THEFY (Q47RV1) Translation initiation factor IF-2|
          Length = 955

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 19/54 (35%), Positives = 20/54 (37%)
 Frame = -3

Query: 218 PFAEGGNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRG 57
           P   GG       R  G R + G  GAG   G       R G G R   G GRG
Sbjct: 259 PTPPGGARPSTSSRSGGGRGRGGGGGAGPRGGGAGGGAPRTGFGGRPGGGRGRG 312

---

>CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (Endothelial|
           collagen)
          Length = 699

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 22/64 (34%), Positives = 30/64 (46%)
 Frame = -3

Query: 203 GNAGLAVGREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHGDRCLRSVYV 24
           G+AGL   R  G    +GE G GG  G+P +  D+  +G    AG     G+R L   + 
Sbjct: 360 GSAGLPGRR--GPPGSKGEVGPGGPPGVPGIRGDQGPNGL---AGKPGLPGERGLPGAHG 414

Query: 23  SPPP 12
            P P
Sbjct: 415 PPGP 418

---

>TB182_HUMAN (Q9C0C2) 182 kDa tankyrase 1-binding protein|
          Length = 1729

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = -3

Query: 182  GREAGQRRKRGEPGAGGARGLPDVACDRRGDGARCWAGDGRGHG 51
            G EAG+  K  E G G A   PD+       GA C  G+ +  G
Sbjct: 1262 GVEAGEFLKSRERGVGQADWTPDLGLRNMAPGAVCSPGESKELG 1305

---

>DPYS_MOUSE (Q9EQF5) Dihydropyrimidinase (EC 3.5.2.2) (DHPase) (Hydantoinase)|
           (DHP)
          Length = 519

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = -3

Query: 338 LVSHPVPLL-FQGVKQLGKLGVFGQXXXRLTGGH*HHVPREPFAE 207
           +V H VPL+     + + + GVF      +T GH   +PR+PFAE
Sbjct: 431 MVCHGVPLVTISRGRVVYEAGVFN-----VTAGHGKFIPRQPFAE 470


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,840,846
Number of Sequences: 219361
Number of extensions: 872746
Number of successful extensions: 5329
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 3035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4781
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2278320915
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

---