Clone Information

BLAST Search Result

Clone Name	baet10c06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla...	196	2e-50
2	CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl...	196	2e-50
3	CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla...	196	3e-50
4	CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl...	192	2e-49
5	CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast...	190	1e-48
6	CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl...	190	1e-48
7	CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla...	189	2e-48
8	CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast...	189	3e-48
9	CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl...	188	4e-48
10	CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla...	188	6e-48
11	CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast...	187	7e-48
12	CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl...	187	1e-47
13	CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl...	186	2e-47
14	CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla...	186	3e-47
15	CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla...	185	4e-47
16	CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla...	185	4e-47
17	CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast...	185	5e-47
18	CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl...	185	5e-47
19	CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop...	184	6e-47
20	CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla...	184	8e-47
21	CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl...	184	1e-46
22	CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla...	184	1e-46
23	CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl...	183	1e-46
24	CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop...	183	2e-46
25	CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop...	182	4e-46
26	CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast...	180	2e-45
27	CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl...	179	3e-45
28	CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast...	179	3e-45
29	CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla...	179	3e-45
30	CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl...	179	3e-45
31	CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ...	178	6e-45
32	CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe...	178	6e-45
33	CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl...	177	1e-44
34	CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe...	175	4e-44
35	CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl...	174	6e-44
36	CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop...	166	3e-41
37	CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast...	164	9e-41
38	CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla...	160	1e-39
39	CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla...	160	2e-39
40	CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl...	159	2e-39
41	CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty...	159	2e-39
42	CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl...	159	3e-39
43	CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast...	158	6e-39
44	CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe...	157	8e-39
45	CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla...	156	2e-38
46	CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo...	154	9e-38
47	CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla...	151	8e-37
48	CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ...	150	1e-36
49	CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ...	147	8e-36
50	CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ...	139	3e-33
51	CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ...	139	4e-33
52	CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl...	135	6e-32
53	CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type...	128	7e-30
54	CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type...	125	3e-29
55	CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop...	121	6e-28
56	CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type...	118	7e-27
57	CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type...	95	6e-20
58	CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro...	85	7e-17
59	CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloropla...	80	2e-15
60	CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast...	74	2e-13
61	LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins pre...	69	4e-12
62	CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloropl...	65	9e-11
63	LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins pre...	60	2e-09
64	CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloropla...	55	6e-08
65	CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chlorop...	54	2e-07
66	CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, ch...	54	2e-07
67	CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloropla...	53	3e-07
68	CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, ch...	52	6e-07
69	CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloropl...	39	0.005
70	FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, ...	39	0.007
71	CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chlo...	36	0.035
72	CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chlo...	36	0.046
73	CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chlo...	36	0.046
74	CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29	35	0.079
75	CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloropl...	35	0.10
76	BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein sh...	32	0.67
77	GDF6_MOUSE (P43028) Growth/differentiation factor 6 precursor (G...	30	1.9
78	CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloropl...	30	2.5
79	GDF6_RAT (Q6HA10) Growth/differentiation factor 6 precursor (GDF...	29	4.3
80	MUC13_MOUSE (P19467) Mucin-13 precursor (Cell surface antigen 11...	29	4.3
81	GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--...	29	4.3
82	GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--...	29	4.3
83	GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	29	4.3
84	GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	29	4.3
85	GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	29	4.3
86	GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	29	4.3
87	YMT1_YEAST (Q04212) Hypothetical oxidoreductase YMR041C (EC 1.-....	29	4.3
88	STAG2_MOUSE (O35638) Cohesin subunit SA-2 (Stromal antigen 2) (S...	29	4.3
89	STAG2_HUMAN (Q8N3U4) Cohesin subunit SA-2 (Stromal antigen 2) (S...	29	4.3
90	SCN5A_HUMAN (Q14524) Sodium channel protein type 5 alpha subunit...	29	5.7
91	S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (G...	29	5.7
92	GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	29	5.7
93	L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chlor...	29	5.7
94	YAB9_YEAST (P31380) Hypothetical 128.5 kDa ATP-dependent helicas...	29	5.7
95	GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	29	5.7
96	GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	7.4
97	TPP1_CANFA (Q9XSB8) Tripeptidyl-peptidase 1 precursor (EC 3.4.14...	28	9.7
98	TB182_MOUSE (P58871) 182 kDa tankyrase 1-binding protein (Fragment)	28	9.7
99	SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic inosit...	28	9.7
100	MYC_DROME (Q9W4S7) Myc protein (dMyc1) (dMyc) (Diminutive protein)	28	9.7
101	GLNA_SQUAC (P41320) Glutamine synthetase, mitochondrial precurso...	28	9.7
102	MRS2_ASPFU (Q4WCV3) Inner membrane magnesium transporter mrs2, m...	28	9.7
103	GLNA_CHICK (P16580) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	9.7

>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score =  196 bits (499), Expect = 2e-50
 Identities = 98/127 (77%), Positives = 104/127 (81%), Gaps = 6/127 (4%)
 Frame = +3

Query: 72  MAATTMALSSPA-----MKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233
           MAA+TMALSSPA     +KL+ GAS V G GR+TMR           PWYG DRV YLGP
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPGASEVFGTGRVTMRKTVKPTGPSGSPWYGSDRVKYLGP 60

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
            SGEPPSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61  FSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 414 NGVKFGE 434
           NGVKFGE
Sbjct: 121 NGVKFGE 127

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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score =  196 bits (499), Expect = 2e-50
 Identities = 98/127 (77%), Positives = 102/127 (80%), Gaps = 6/127 (4%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233
           MAA TMALSSP     A+KL+  AS + G GRITMR           PWYGPDRV YLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGP 60

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
            SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 414 NGVKFGE 434
           NGVKFGE
Sbjct: 121 NGVKFGE 127

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>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score =  196 bits (497), Expect = 3e-50
 Identities = 97/123 (78%), Positives = 100/123 (81%), Gaps = 2/123 (1%)
 Frame = +3

Query: 72  MAATTMALSSPAMKLAGASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYLGPLSGE 245
           MAA TMALSSPA+    A+ V G GRITMR             PWYG DRVLYLGPLSGE
Sbjct: 1   MAAATMALSSPALAGKAAAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGE 60

Query: 246 PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 425
           PPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVK
Sbjct: 61  PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVK 120

Query: 426 FGE 434
           FGE
Sbjct: 121 FGE 123

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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score =  192 bits (489), Expect = 2e-49
 Identities = 95/127 (74%), Positives = 101/127 (79%), Gaps = 6/127 (4%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233
           MAA TMALSSP     A+KL+  A  + G GR++MR           PWYGPDRV YLGP
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGP 60

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
            SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 414 NGVKFGE 434
           NGVKFGE
Sbjct: 121 NGVKFGE 127

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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score =  190 bits (483), Expect = 1e-48
 Identities = 97/129 (75%), Positives = 103/129 (79%), Gaps = 8/129 (6%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLAG-ASYVLGGGRITMRXXXXX--XXXXXXPWYGPDRVLYL 227
           MA++TMALSSP     A+KL   AS ++G GRITMR             PWYGPDRV YL
Sbjct: 1   MASSTMALSSPSLAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYL 60

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 408 ARNGVKFGE 434
           ARNGVKFGE
Sbjct: 121 ARNGVKFGE 129

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>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score =  190 bits (482), Expect = 1e-48
 Identities = 95/129 (73%), Positives = 103/129 (79%), Gaps = 8/129 (6%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXX--PWYGPDRVLYL 227
           MAA+TMALSSP     A+KL+  +S + G G++TMR             PWYGPDRV YL
Sbjct: 1   MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYL 60

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 408 ARNGVKFGE 434
           ARNGVKFGE
Sbjct: 121 ARNGVKFGE 129

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>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score =  189 bits (481), Expect = 2e-48
 Identities = 96/127 (75%), Positives = 99/127 (77%), Gaps = 6/127 (4%)
 Frame = +3

Query: 72  MAATTMALSSPAMKLAG---ASYVLGGGRITMRXXXXX---XXXXXXPWYGPDRVLYLGP 233
           MAA TMALSSP M  A    +S + G  RITMR              PWYG DRVLYLGP
Sbjct: 1   MAAATMALSSPVMARAAPSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGP 60

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
           LSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 61  LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 120

Query: 414 NGVKFGE 434
           NGVKFGE
Sbjct: 121 NGVKFGE 127

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>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score =  189 bits (479), Expect = 3e-48
 Identities = 94/128 (73%), Positives = 101/128 (78%), Gaps = 7/128 (5%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 230
           MAATTM+LSS      A+K   +S ++G  R+ MR             PWYG DRVLYLG
Sbjct: 1   MAATTMSLSSSSFAGKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLG 60

Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410
           PLSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 61  PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120

Query: 411 RNGVKFGE 434
           RNGVKFGE
Sbjct: 121 RNGVKFGE 128

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>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score =  188 bits (478), Expect = 4e-48
 Identities = 95/128 (74%), Positives = 102/128 (79%), Gaps = 7/128 (5%)
 Frame = +3

Query: 72  MAATTMALSSP----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 230
           MAA+T ALSSP    A+KL+  +S V G G++TMR             PWYGPDRV YLG
Sbjct: 1   MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLG 60

Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410
           P SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120

Query: 411 RNGVKFGE 434
           RNGVKFGE
Sbjct: 121 RNGVKFGE 128

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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score =  188 bits (477), Expect = 6e-48
 Identities = 95/128 (74%), Positives = 102/128 (79%), Gaps = 7/128 (5%)
 Frame = +3

Query: 72  MAATTMALSSP----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 230
           MAA+T ALSSP    A+KL+  +S V G G++TMR             PWYGPDRV YLG
Sbjct: 1   MAASTTALSSPFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLG 60

Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410
           P SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 120

Query: 411 RNGVKFGE 434
           RNGVKFGE
Sbjct: 121 RNGVKFGE 128

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>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score =  187 bits (476), Expect = 7e-48
 Identities = 94/127 (74%), Positives = 98/127 (77%), Gaps = 6/127 (4%)
 Frame = +3

Query: 72  MAATTMALSSPAMKLAGA---SYVLGGGRITMRXXXXXX---XXXXXPWYGPDRVLYLGP 233
           MA++TMALSS A         S   G  R+TMR              PWYGPDRVLYLGP
Sbjct: 1   MASSTMALSSTAFAGKAVNVPSSSFGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGP 60

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
           LSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR
Sbjct: 61  LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 120

Query: 414 NGVKFGE 434
           NGVKFGE
Sbjct: 121 NGVKFGE 127

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>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score =  187 bits (474), Expect = 1e-47
 Identities = 94/129 (72%), Positives = 101/129 (78%), Gaps = 8/129 (6%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYL 227
           MA +TMALSS      A+KL+  +S + G GR+TMR             PWYGPDRV YL
Sbjct: 1   MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYL 60

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 408 ARNGVKFGE 434
           ARNGVKFGE
Sbjct: 121 ARNGVKFGE 129

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>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score =  186 bits (472), Expect = 2e-47
 Identities = 94/129 (72%), Positives = 101/129 (78%), Gaps = 8/129 (6%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 227
           MAA TMALSS      A+KL+  +S + G G++TMR             PWYGPDRV YL
Sbjct: 1   MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYL 60

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 408 ARNGVKFGE 434
           ARNGVKFGE
Sbjct: 121 ARNGVKFGE 129

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>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score =  186 bits (471), Expect = 3e-47
 Identities = 92/125 (73%), Positives = 100/125 (80%), Gaps = 5/125 (4%)
 Frame = +3

Query: 75  AATTMALSSPAMKLAGASYVLGG-----GRITMRXXXXXXXXXXXPWYGPDRVLYLGPLS 239
           AA++MALSSP+  LAG +  LG      GR++MR           PWYGPDRV YLGP S
Sbjct: 3   AASSMALSSPS--LAGKAVKLGPSAPEVGRVSMRKTVTKQVSSGSPWYGPDRVKYLGPFS 60

Query: 240 GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 419
           GEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNG
Sbjct: 61  GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNG 120

Query: 420 VKFGE 434
           VKFGE
Sbjct: 121 VKFGE 125

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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score =  185 bits (470), Expect = 4e-47
 Identities = 93/129 (72%), Positives = 102/129 (79%), Gaps = 8/129 (6%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 227
           MAA+TMALSS      A+KL+  +S + G G++TMR             PWYGP+RV YL
Sbjct: 1   MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYL 60

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 408 ARNGVKFGE 434
           ARNGVKFGE
Sbjct: 121 ARNGVKFGE 129

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>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score =  185 bits (470), Expect = 4e-47
 Identities = 96/128 (75%), Positives = 102/128 (79%), Gaps = 7/128 (5%)
 Frame = +3

Query: 72  MAATTMALSSPA-----MKLA-GASYVLGGGRITMRXXXXXXXX-XXXPWYGPDRVLYLG 230
           MAA+TMALSSPA     +KL+  AS VLG GR+TMR            PWYG DRV YLG
Sbjct: 1   MAASTMALSSPAFAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410
           P SGE PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 411 RNGVKFGE 434
           RNGVKFGE
Sbjct: 121 RNGVKFGE 128

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>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score =  185 bits (469), Expect = 5e-47
 Identities = 94/127 (74%), Positives = 102/127 (80%), Gaps = 6/127 (4%)
 Frame = +3

Query: 72  MAATTMALSSPAM-----KLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233
           MAA+TMALSSPA+     K+A  +S + G GR++MR           PWYGPDRV YLGP
Sbjct: 1   MAASTMALSSPALAGKAVKVAPSSSELFGNGRVSMRKTVKAPVSDS-PWYGPDRVKYLGP 59

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
            SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 60  FSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 119

Query: 414 NGVKFGE 434
           NGVKFGE
Sbjct: 120 NGVKFGE 126

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>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score =  185 bits (469), Expect = 5e-47
 Identities = 93/127 (73%), Positives = 98/127 (77%), Gaps = 6/127 (4%)
 Frame = +3

Query: 72  MAATTMALSSPAMKLAGA---SYVLGGGRITMRXXXXXX---XXXXXPWYGPDRVLYLGP 233
           MA++TMALSS A         S + G  R+TMR              PWYGPDRVLYLGP
Sbjct: 1   MASSTMALSSTAFAGKAVNVPSSLFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGP 60

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
           LSGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 61  LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAR 120

Query: 414 NGVKFGE 434
           NGVKFGE
Sbjct: 121 NGVKFGE 127

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>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score =  184 bits (468), Expect = 6e-47
 Identities = 92/129 (71%), Positives = 100/129 (77%), Gaps = 8/129 (6%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLAGASY-VLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYL 227
           MAATTMALSS      A+KL+ +S  + G G++TMR             PWYGPDRV YL
Sbjct: 1   MAATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYL 60

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP SGE PSYL+GEFP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 
Sbjct: 61  GPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 120

Query: 408 ARNGVKFGE 434
           ARNG+KFGE
Sbjct: 121 ARNGIKFGE 129

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>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score =  184 bits (467), Expect = 8e-47
 Identities = 93/129 (72%), Positives = 100/129 (77%), Gaps = 8/129 (6%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 227
           M A+TMALSSP     A+KL+  +S + G G+  MR             PWYGPDRV YL
Sbjct: 1   MTASTMALSSPSFAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYL 60

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 408 ARNGVKFGE 434
           ARNGVKFGE
Sbjct: 121 ARNGVKFGE 129

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>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score =  184 bits (466), Expect = 1e-46
 Identities = 94/128 (73%), Positives = 98/128 (76%), Gaps = 7/128 (5%)
 Frame = +3

Query: 72  MAATTMALSSPAMK------LAGASYVLGGGRITMRXXXXXXXX-XXXPWYGPDRVLYLG 230
           MAA+TMALSSPA           AS VLG GR+TMR            PWYG DRV YLG
Sbjct: 1   MAASTMALSSPAFAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLG 60

Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410
           P SGE PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPELLA
Sbjct: 61  PFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELLA 120

Query: 411 RNGVKFGE 434
           RNGVKFGE
Sbjct: 121 RNGVKFGE 128

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>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score =  184 bits (466), Expect = 1e-46
 Identities = 94/126 (74%), Positives = 99/126 (78%), Gaps = 5/126 (3%)
 Frame = +3

Query: 72  MAATTMALSSPAMKLAGASYVLGG---GRITMRXXXXX--XXXXXXPWYGPDRVLYLGPL 236
           MAA+TMA+SS AM  AG    +G    GRITMR             PWYGPDRV YLGP 
Sbjct: 1   MAASTMAISSTAM--AGTPIKVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPF 58

Query: 237 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 416
           SGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RN
Sbjct: 59  SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRN 118

Query: 417 GVKFGE 434
           GVKFGE
Sbjct: 119 GVKFGE 124

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>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score =  183 bits (465), Expect = 1e-46
 Identities = 90/128 (70%), Positives = 97/128 (75%), Gaps = 7/128 (5%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 230
           MAA TMA+SS      A+ +  +S + G G+ TMR             PWYGPDRV YLG
Sbjct: 1   MAAATMAISSSSFAGKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLG 60

Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410
           P SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL A
Sbjct: 61  PFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFA 120

Query: 411 RNGVKFGE 434
           RNGVKFGE
Sbjct: 121 RNGVKFGE 128

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>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score =  183 bits (464), Expect = 2e-46
 Identities = 93/129 (72%), Positives = 99/129 (76%), Gaps = 8/129 (6%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 227
           MAA TMALSSP     A+K +  +S + G G+ TMR             PWYGPDRV YL
Sbjct: 1   MAAATMALSSPSFAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYL 60

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP SGE PSYL+GEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 120

Query: 408 ARNGVKFGE 434
           ARNGVKFGE
Sbjct: 121 ARNGVKFGE 129

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>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score =  182 bits (461), Expect = 4e-46
 Identities = 92/129 (71%), Positives = 98/129 (75%), Gaps = 8/129 (6%)
 Frame = +3

Query: 72  MAATTMALSSPA-----MKLA-GASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYL 227
           MAA TMALSS       +KL+  +S + G G+ TMR             PWYGPDRV YL
Sbjct: 1   MAAATMALSSSTFAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYL 60

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 
Sbjct: 61  GPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELF 120

Query: 408 ARNGVKFGE 434
           ARNGVKFGE
Sbjct: 121 ARNGVKFGE 129

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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score =  180 bits (456), Expect = 2e-45
 Identities = 90/130 (69%), Positives = 97/130 (74%), Gaps = 9/130 (6%)
 Frame = +3

Query: 72  MAATTMALSSPAM-------KLAGASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLY 224
           MAA++MALSSP +           +S  LGG R TMR             PWYGPDRV Y
Sbjct: 1   MAASSMALSSPTLTGKPVETSANPSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKY 60

Query: 225 LGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 404
           LGP SGE PSYL+GEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPEL
Sbjct: 61  LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPEL 120

Query: 405 LARNGVKFGE 434
           L+RNGVKFGE
Sbjct: 121 LSRNGVKFGE 130

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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score =  179 bits (454), Expect = 3e-45
 Identities = 89/129 (68%), Positives = 98/129 (75%), Gaps = 7/129 (5%)
 Frame = +3

Query: 69  AMAATTMALSSPAM-----KLAGASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYL 227
           A ++++MALSSP +     KL  +S  LG  R TMR             PWYGPDRV YL
Sbjct: 3   ASSSSSMALSSPTLAGKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYL 62

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP SGE PSYL+GEFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPELL
Sbjct: 63  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELL 122

Query: 408 ARNGVKFGE 434
           +RNGVKFGE
Sbjct: 123 SRNGVKFGE 131

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>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score =  179 bits (454), Expect = 3e-45
 Identities = 82/100 (82%), Positives = 85/100 (85%)
 Frame = +3

Query: 135 LGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSAD 314
           LG GR++MR           PWYGPDRV YLGP SGEPPSYL+GEFPGDYGWDTAGLSAD
Sbjct: 8   LGVGRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSAD 67

Query: 315 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 434
           PETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGE
Sbjct: 68  PETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGE 107

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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score =  179 bits (454), Expect = 3e-45
 Identities = 91/127 (71%), Positives = 96/127 (75%), Gaps = 6/127 (4%)
 Frame = +3

Query: 72  MAATTMALSSPAM------KLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233
           MAA TMALSS          L+ +S V G  R++MR           PWYGPDRV YLGP
Sbjct: 1   MAAATMALSSSTFAGKAVKNLSSSSEVQGDARVSMRKTAATKKVGS-PWYGPDRVKYLGP 59

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
            SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLAR
Sbjct: 60  FSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLAR 119

Query: 414 NGVKFGE 434
           NGVKFGE
Sbjct: 120 NGVKFGE 126

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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score =  179 bits (453), Expect = 3e-45
 Identities = 90/126 (71%), Positives = 95/126 (75%), Gaps = 5/126 (3%)
 Frame = +3

Query: 72  MAATTMALSSPAM---KLAGASYVLGGGRITMRXXXXXX--XXXXXPWYGPDRVLYLGPL 236
           MAA TMA++S A+     AG   V G GRITMR             PWYG DRVLYLGPL
Sbjct: 1   MAAATMAITSRALVGKPAAGTRDVFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPL 60

Query: 237 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 416
           SG PPSYL+GEFPGDYGWDT GLSADPETFAKNRELEVIHCRWA+   LGCVFPELLARN
Sbjct: 61  SGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVIHCRWAIAVGLGCVFPELLARN 120

Query: 417 GVKFGE 434
           GVKFGE
Sbjct: 121 GVKFGE 126

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>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score =  178 bits (451), Expect = 6e-45
 Identities = 84/115 (73%), Positives = 91/115 (79%), Gaps = 1/115 (0%)
 Frame = +3

Query: 93  LSSPAMKLA-GASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGE 269
           L+  A+KL+  A  + G  + TMR           PWYGPDRV YLGP SGEPPSYL+GE
Sbjct: 3   LAGQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGE 62

Query: 270 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 434
           FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGE
Sbjct: 63  FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGE 117

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>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score =  178 bits (451), Expect = 6e-45
 Identities = 89/133 (66%), Positives = 94/133 (70%), Gaps = 5/133 (3%)
 Frame = +3

Query: 51  CSIRQQAMAATTMALSSPAMK--LAGASYVLGGGRITMRXXXX---XXXXXXXPWYGPDR 215
           C I   A A   ++   P     L   + V G  R+TMR              PWYGPDR
Sbjct: 4   CGIGSCAFAGGQISSLKPHTNQLLGVGAGVHGEARVTMRKATTKKLTASASTSPWYGPDR 63

Query: 216 VLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVF 395
           VLYLGP SGEPPSYL+GEFPGDYGWDTAGLSADPE FAKNRELEVIHCRWAMLGALGCVF
Sbjct: 64  VLYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPENFAKNRELEVIHCRWAMLGALGCVF 123

Query: 396 PELLARNGVKFGE 434
           PELLARNGVKFGE
Sbjct: 124 PELLARNGVKFGE 136

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>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score =  177 bits (448), Expect = 1e-44
 Identities = 87/128 (67%), Positives = 95/128 (74%), Gaps = 7/128 (5%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXX--XXXXPWYGPDRVLYLG 230
           MAA TMALSS      A+ +  +S +   G++TMR             PWYGPDRV YLG
Sbjct: 1   MAAATMALSSSSFAGKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLG 60

Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410
           P SGE PSYL+GEFPGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL A
Sbjct: 61  PFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFA 120

Query: 411 RNGVKFGE 434
           RNGVKFGE
Sbjct: 121 RNGVKFGE 128

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>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score =  175 bits (444), Expect = 4e-44
 Identities = 84/111 (75%), Positives = 87/111 (78%), Gaps = 3/111 (2%)
 Frame = +3

Query: 111 KLAGASYVLGGGRITMRXXX---XXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGD 281
           +L G     G  R+TMR              PWYGPDRVLYLGP SGEPPSYL+GEFPGD
Sbjct: 30  QLLGVGGAHGEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGD 89

Query: 282 YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 434
           YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGE
Sbjct: 90  YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGE 140

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>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score =  174 bits (442), Expect = 6e-44
 Identities = 83/111 (74%), Positives = 87/111 (78%), Gaps = 3/111 (2%)
 Frame = +3

Query: 111 KLAGASYVLGGGRITMRXXX---XXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGD 281
           +L G     G  R+TMR              PWYGPDRV+YLGP SGEPPSYL+GEFPGD
Sbjct: 30  QLLGVGGAHGEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGD 89

Query: 282 YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 434
           YGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELLARNGVKFGE
Sbjct: 90  YGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGE 140

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>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score =  166 bits (419), Expect = 3e-41
 Identities = 83/128 (64%), Positives = 96/128 (75%), Gaps = 1/128 (0%)
 Frame = +3

Query: 54  SIRQQAMAA-TTMALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLG 230
           +I+Q A A  T +  S+  +   GA   +GGGR++MR            WYGPDR  YLG
Sbjct: 5   AIQQSAFAGQTALKQSNELVCKIGA---VGGGRVSMRRTVKSAPTSI--WYGPDRPKYLG 59

Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410
           P S + PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE+L+
Sbjct: 60  PFSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILS 119

Query: 411 RNGVKFGE 434
           +NGVKFGE
Sbjct: 120 KNGVKFGE 127

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>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score =  164 bits (415), Expect = 9e-41
 Identities = 83/129 (64%), Positives = 93/129 (72%), Gaps = 2/129 (1%)
 Frame = +3

Query: 54  SIRQQAMAATTMALSSPAM--KLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYL 227
           +I+Q A A  T+      +  K+ G      GGR++MR            WYGPDR  YL
Sbjct: 5   TIQQSAFAGQTLLKPQNELVRKVGG-----NGGRVSMRRTIKSAPESI--WYGPDRPKYL 57

Query: 228 GPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           GP S + PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL
Sbjct: 58  GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 117

Query: 408 ARNGVKFGE 434
           A+NGVKFGE
Sbjct: 118 AKNGVKFGE 126

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>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score =  160 bits (405), Expect = 1e-39
 Identities = 86/126 (68%), Positives = 92/126 (73%), Gaps = 5/126 (3%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPL 236
           MAA+TMALSS      AMKLA ++  LG GR++MR           PWYGPDRV YLGP 
Sbjct: 1   MAASTMALSSSSLAGQAMKLAPSTPELGVGRVSMRKTAPKTVSSGSPWYGPDRVKYLGPF 60

Query: 237 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 416
           SGE PSYL+GEF G        LSADPETFAKNRELEVIH RWAMLGALGCVFPELLARN
Sbjct: 61  SGEAPSYLTGEFHG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARN 112

Query: 417 GVKFGE 434
           GVKFGE
Sbjct: 113 GVKFGE 118

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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score =  160 bits (404), Expect = 2e-39
 Identities = 79/128 (61%), Positives = 90/128 (70%)
 Frame = +3

Query: 51  CSIRQQAMAATTMALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLG 230
           C+I+Q A     +  S         ++  G GRITMR            WYG DR  YLG
Sbjct: 4   CAIQQSAFVGQAVGKSQNEFIRKVGNF--GEGRITMRRTVKSAPQSI--WYGEDRPKYLG 59

Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410
           P S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L+
Sbjct: 60  PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILS 119

Query: 411 RNGVKFGE 434
           +NGVKFGE
Sbjct: 120 KNGVKFGE 127

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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score =  159 bits (403), Expect = 2e-39
 Identities = 80/127 (62%), Positives = 90/127 (70%)
 Frame = +3

Query: 54  SIRQQAMAATTMALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233
           +I+Q A A  T   S   +     S+  GGGR TMR            WYG DR  YLGP
Sbjct: 5   AIQQSAFAGQTALKSQNELVRKIGSF--GGGRATMRRTVKSAPQSI--WYGEDRPKYLGP 60

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
            S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 414 NGVKFGE 434
           NGV FGE
Sbjct: 121 NGVTFGE 127

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>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score =  159 bits (403), Expect = 2e-39
 Identities = 72/80 (90%), Positives = 75/80 (93%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 374
           PW+GPD V YLGP SGE PSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAML
Sbjct: 11  PWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAML 70

Query: 375 GALGCVFPELLARNGVKFGE 434
           GALGCVFPELL+RNGVKFGE
Sbjct: 71  GALGCVFPELLSRNGVKFGE 90

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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score =  159 bits (402), Expect = 3e-39
 Identities = 80/127 (62%), Positives = 89/127 (70%)
 Frame = +3

Query: 54  SIRQQAMAATTMALSSPAMKLAGASYVLGGGRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233
           +I Q A A  T   S   +     S+   GGR TMR            WYG DR  YLGP
Sbjct: 5   AIEQSAFAGQTALKSQNELVRKIGSF--NGGRATMRRTVKSAPQSI--WYGEDRPKYLGP 60

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
            S + PSYL+GEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPE+L++
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 414 NGVKFGE 434
           NGVKFGE
Sbjct: 121 NGVKFGE 127

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>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score =  158 bits (399), Expect = 6e-39
 Identities = 74/98 (75%), Positives = 80/98 (81%)
 Frame = +3

Query: 141 GGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPE 320
           GGRITMR            WYGPDR  YLGP S + PSYL+GEFPGDYGWDTAGLSADPE
Sbjct: 30  GGRITMRRTVKSAPQSI--WYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87

Query: 321 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 434
           TFA+NRELEVIH RWAMLGALGCVFPE+L++NGVKFGE
Sbjct: 88  TFARNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGE 125



 Score = 28.5 bits (62), Expect = 7.4
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +3

Query: 270 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 419
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 187 YPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 235

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>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score =  157 bits (398), Expect = 8e-39
 Identities = 72/79 (91%), Positives = 73/79 (92%)
 Frame = +3

Query: 198 WYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 377
           WYG DR LYLGP SG PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLG
Sbjct: 49  WYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLG 108

Query: 378 ALGCVFPELLARNGVKFGE 434
           ALGCV PELLA+NGVKFGE
Sbjct: 109 ALGCVTPELLAKNGVKFGE 127

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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score =  156 bits (394), Expect = 2e-38
 Identities = 72/98 (73%), Positives = 79/98 (80%)
 Frame = +3

Query: 141 GGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPE 320
           GGR+TMR            WYG DR  YLGP S + PSYL+GEFPGDYGWDTAGLSADPE
Sbjct: 4   GGRVTMRRTVKSAPQSI--WYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 61

Query: 321 TFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 434
           TFA+NRELEVIHCRWAMLGALGCVFPE+L++NGV FGE
Sbjct: 62  TFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGE 99

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>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score =  154 bits (389), Expect = 9e-38
 Identities = 73/96 (76%), Positives = 77/96 (80%)
 Frame = +3

Query: 147 RITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETF 326
           RITMR            WYGPDR  YLGP S   PSYL+GEFPGDYGWDTA +SADPETF
Sbjct: 35  RITMRRTVRSAPESI--WYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETF 92

Query: 327 AKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 434
           AKNRELEVIHCRWAMLGALGCVFPELLA+NG+KFGE
Sbjct: 93  AKNRELEVIHCRWAMLGALGCVFPELLAKNGLKFGE 128

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>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score =  151 bits (381), Expect = 8e-37
 Identities = 72/99 (72%), Positives = 76/99 (76%)
 Frame = +3

Query: 138 GGGRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADP 317
           G  R TMR            WYGPDR  YLGP S + PSYL+GEFPGDYGWDTAGLSADP
Sbjct: 31  GQARFTMRRTVKSAPESI--WYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADP 88

Query: 318 ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 434
           ETFA+NRELEVIH RWAMLGALGC FPELL +NGVKFGE
Sbjct: 89  ETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGE 127

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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score =  150 bits (379), Expect = 1e-36
 Identities = 78/127 (61%), Positives = 90/127 (70%), Gaps = 5/127 (3%)
 Frame = +3

Query: 69  AMAATTMA---LSSPAMKLAGASYVLGG--GRITMRXXXXXXXXXXXPWYGPDRVLYLGP 233
           AM +T +A   L  P  +L+    VLG    R+TMR            WYG DR  +LGP
Sbjct: 6   AMHSTALAGQSLVKPVNELSRK--VLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGP 63

Query: 234 LSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
            SGE PSYL+GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGALGC+ PELLA+
Sbjct: 64  FSGETPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAK 123

Query: 414 NGVKFGE 434
           +GVKFGE
Sbjct: 124 SGVKFGE 130



 Score = 30.0 bits (66), Expect = 2.5
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
 Frame = +3

Query: 228 GPLSGE--PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 401
           GPL GE   P Y  G F      D  GL+ DP+TFA+ +  E+ + R AM    G     
Sbjct: 182 GPL-GEVTDPIYPGGSF------DPLGLADDPDTFAELKVKEIKNGRLAMFSMFGFFVQA 234

Query: 402 LLARNG 419
           ++   G
Sbjct: 235 IVTGKG 240

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>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score =  147 bits (372), Expect = 8e-36
 Identities = 69/97 (71%), Positives = 77/97 (79%)
 Frame = +3

Query: 144 GRITMRXXXXXXXXXXXPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPET 323
           GR +MR            WYG DR  +LGP S + PSYL+GEFPGDYGWDTAGLSADPET
Sbjct: 32  GRFSMRRTVKAVPQSI--WYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPET 89

Query: 324 FAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGE 434
           FAKNRELEVIH RWAMLGALGC+FPELL++NGV+FGE
Sbjct: 90  FAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGE 126

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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score =  139 bits (350), Expect = 3e-33
 Identities = 78/142 (54%), Positives = 92/142 (64%), Gaps = 9/142 (6%)
 Frame = +3

Query: 36  ISSLLCSIRQQAMAATTMALS--------SPAMKLAGASYVLGGGRITMRXXXXXXXXXX 191
           ++S + +   +A+ A T  LS        SP   +A A+     GRITM           
Sbjct: 1   MASTIMAAASRAVVAKTPFLSGQGRAASASPLRDIAAAT----NGRITMGNDL------- 49

Query: 192 XPWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 371
             WYGPDRV YLGP S + PSYL+GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAM
Sbjct: 50  --WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAM 107

Query: 372 LGALGCVFPELLAR-NGVKFGE 434
           LGALGCVFPE+L +  GV+F E
Sbjct: 108 LGALGCVFPEVLQKWVGVEFKE 129



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
 Frame = +3

Query: 213 RVLYLGPLSGEPPSYLSGE------FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 374
           +VL +G + G   + L G       +PG   +D  GL+ DP TFA+ +  E+ + R AM 
Sbjct: 166 QVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMF 225

Query: 375 GALGCVFPELLARNG 419
              G     ++   G
Sbjct: 226 SMFGFFVQAIVTGKG 240

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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score =  139 bits (349), Expect = 4e-33
 Identities = 63/68 (92%), Positives = 65/68 (95%)
 Frame = +3

Query: 231 PLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA 410
           P SGEPPSYL+GEFPGDYGWDTAGLSADPETFAKNRELEVIH  WAMLGALGCVFPELL+
Sbjct: 1   PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLS 60

Query: 411 RNGVKFGE 434
           RNGVKFGE
Sbjct: 61  RNGVKFGE 68

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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score =  135 bits (339), Expect = 6e-32
 Identities = 59/72 (81%), Positives = 64/72 (88%)
 Frame = +3

Query: 198 WYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 377
           WYGPDRV YLGP S + PSYL+GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLG
Sbjct: 47  WYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLG 106

Query: 378 ALGCVFPELLAR 413
           ALGC+FPE+L +
Sbjct: 107 ALGCIFPEVLEK 118



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +3

Query: 270 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 419
           +PG   +D  GL+ DP TFA+ +  E+ + R AM    G     ++   G
Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237

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>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score =  128 bits (321), Expect = 7e-30
 Identities = 60/80 (75%), Positives = 66/80 (82%), Gaps = 1/80 (1%)
 Frame = +3

Query: 198 WYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 377
           WYGPDR  +LGP S   P+YL+GEFPGDYGWDTAGLSADPETF K RELEVIH RWA+LG
Sbjct: 39  WYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLG 98

Query: 378 ALGCVFPELLAR-NGVKFGE 434
           ALG + PELL+   GVKFGE
Sbjct: 99  ALGILTPELLSTYAGVKFGE 118



 Score = 30.8 bits (68), Expect = 1.5
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +3

Query: 270 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 419
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM    G     ++   G
Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKG 228

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>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  125 bits (315), Expect = 3e-29
 Identities = 58/80 (72%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
 Frame = +3

Query: 198 WYGPDRVLYLGPLS-GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 374
           +YGP+R  +LGP S    P+YL+GEFPGDYGWDTAGLSADPETF + RELE+IH RWAML
Sbjct: 36  FYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAML 95

Query: 375 GALGCVFPELLARNGVKFGE 434
           GALGC  PELLA++G KFGE
Sbjct: 96  GALGCQTPELLAKSGTKFGE 115



 Score = 28.1 bits (61), Expect = 9.7
 Identities = 15/50 (30%), Positives = 26/50 (52%)
 Frame = +3

Query: 270 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 419
           +PG+  +D  GL+ DP+TFA+ +  E+ + R A     G     ++   G
Sbjct: 177 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKG 225

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>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score =  121 bits (304), Expect = 6e-28
 Identities = 59/74 (79%), Positives = 62/74 (83%)
 Frame = +3

Query: 213 RVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCV 392
           RV YLGP SGE PSYL+GEFPGDYGWDTAGLSA PETFAKNRELEVIH R AM  ALGC+
Sbjct: 58  RVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCI 117

Query: 393 FPELLARNGVKFGE 434
           FPELL+  G  FGE
Sbjct: 118 FPELLSVMGQGFGE 131

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>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score =  118 bits (295), Expect = 7e-27
 Identities = 55/81 (67%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
 Frame = +3

Query: 198 WYGPDRVLYLGPLS-GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 374
           +YGPDR  +LGP S  + P YL+GEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+L
Sbjct: 33  FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92

Query: 375 GALGCVFPELLAR-NGVKFGE 434
           GALG + PELL++  GV+FGE
Sbjct: 93  GALGILTPELLSQYAGVQFGE 113



 Score = 30.4 bits (67), Expect = 1.9
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +3

Query: 270 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 419
           +PG   +D  GL+ DP+TFA+ +  E+ + R AM   LG     ++   G
Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKG 225

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>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 273

 Score = 95.1 bits (235), Expect = 6e-20
 Identities = 49/80 (61%), Positives = 58/80 (72%), Gaps = 1/80 (1%)
 Frame = +3

Query: 198 WYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 377
           +YGPD       L  + P   +GEFPGDYGWDTAGLSADPETF + RELE+IH R  +LG
Sbjct: 57  FYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLG 115

Query: 378 ALGCVFPELLA-RNGVKFGE 434
           ALG V PELLA  +G+KFG+
Sbjct: 116 ALGMVTPELLADEDGIKFGD 135



 Score = 32.3 bits (72), Expect = 0.51
 Identities = 17/50 (34%), Positives = 28/50 (56%)
 Frame = +3

Query: 270 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNG 419
           +PG+  +D  GL+ DP+TFA+ +  E+ + R AM   LG     ++   G
Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKG 246

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>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 85.1 bits (209), Expect = 7e-17
 Identities = 43/81 (53%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
 Frame = +3

Query: 198 WYGPDRVLYL--GPLS-GEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWA 368
           WYGPDR ++L  G L   E P YL+GE  GDYG+D  GL   PE FAK +  E+IH RWA
Sbjct: 62  WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWA 121

Query: 369 MLGALGCVFPELLARNGVKFG 431
           MLGA G + PE L + G   G
Sbjct: 122 MLGAAGFIIPEALNKYGANCG 142

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>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCI type II CAB-7)
          Length = 270

 Score = 80.1 bits (196), Expect = 2e-15
 Identities = 44/122 (36%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
 Frame = +3

Query: 87  MALSSPAMKLAGA------SYVLGGGRITMRXXXXXXXXXXXPWY----GPDRVLYLGPL 236
           +A SSP+ +  G+      +  LGG R+ +                    PDR L+    
Sbjct: 13  VAFSSPSSRRNGSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFP-- 70

Query: 237 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARN 416
              PP +L G  PGD+G+D  GL++DPE+   N++ E++HCRWAMLGA G   PELL + 
Sbjct: 71  GSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPELLTKI 130

Query: 417 GV 422
           G+
Sbjct: 131 GI 132

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>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCI type II CAB)
          Length = 270

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 34/72 (47%), Positives = 44/72 (61%)
 Frame = +3

Query: 207 PDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 386
           PDR L+       PP +L G  PGD+G+D  GL +DPE+   N + E++H RWAMLGA G
Sbjct: 63  PDRPLWFP--GSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAG 120

Query: 387 CVFPELLARNGV 422
              PE L + GV
Sbjct: 121 IFIPEFLTKIGV 132

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>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor|
           [Contains: LH38 protein 1; LH38 protein 2; LH38 protein
           3] (Fragment)
          Length = 530

 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 34/61 (55%), Positives = 42/61 (68%)
 Frame = +3

Query: 246 PPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVK 425
           PP YL+GE  GD G+D AGL+ADP TF + +  EV HCR +ML  +GC+ PELL  NG  
Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPELLG-NGAW 438

Query: 426 F 428
           F
Sbjct: 439 F 439



 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 29/59 (49%), Positives = 41/59 (69%)
 Frame = +3

Query: 237 SGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
           + EPP+ L+GE+P D G+D   L+ADP+ +A+ R  EV H R AML  +GC+ PELL +
Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPELLGK 251



 Score = 60.8 bits (146), Expect = 1e-09
 Identities = 28/55 (50%), Positives = 39/55 (70%)
 Frame = +3

Query: 249 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
           PS+L+GE+ GD G+D AGL+ADP+TF + R  EV H R AML  +G + P+ L +
Sbjct: 12  PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPDYLGK 66

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>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor|
           (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa
           protein)
          Length = 246

 Score = 64.7 bits (156), Expect = 9e-11
 Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = +3

Query: 234 LSGEP-PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELL 407
           + G+P PSYL G  PGD+G+D+ GL   P    + +E E+IHCRWAML   G + PE L
Sbjct: 50  MPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPEAL 108

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>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor|
           [Contains: LH35 protein 1; LH35 protein 2] (Fragment)
          Length = 331

 Score = 60.5 bits (145), Expect = 2e-09
 Identities = 25/57 (43%), Positives = 39/57 (68%)
 Frame = +3

Query: 243 EPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR 413
           +PP++L+GE+P D G+D   ++ADP  +A+ R  EV H R +ML  +G + PELL +
Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELLGK 223



 Score = 36.2 bits (82), Expect = 0.035
 Identities = 19/38 (50%), Positives = 24/38 (63%)
 Frame = +3

Query: 315 PETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 428
           P  + + R  EV + R AML  +GCV+PELL  NGV F
Sbjct: 1   PTVYERMRVAEVFNGRLAMLAIVGCVYPELLG-NGVWF 37

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>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCI type III CAB-4) (LHCP)
          Length = 251

 Score = 55.5 bits (132), Expect = 6e-08
 Identities = 24/58 (41%), Positives = 35/58 (60%)
 Frame = +3

Query: 249 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGV 422
           P YL+G   GD G+D  GL+ DPE      + E+++ RWAMLG  G + PE+  + G+
Sbjct: 64  PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGI 121

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>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast|
           precursor
          Length = 261

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 28/46 (60%)
 Frame = +3

Query: 249 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 386
           P +L G  PGD+G+D  GL  DP      RE E+IH RWAML  LG
Sbjct: 73  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLG 118

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>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast|
           precursor (CAB-10A) (LHCP)
          Length = 256

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 24/46 (52%), Positives = 27/46 (58%)
 Frame = +3

Query: 249 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 386
           P +L G  PGDYG+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 68  PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113

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>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCI type III CAB-8)
          Length = 273

 Score = 53.1 bits (126), Expect = 3e-07
 Identities = 46/128 (35%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
 Frame = +3

Query: 72  MAATTMALSSPAMKLAGASYVLGGGRITM---RXXXXXXXXXXXP--WYGPDRVLYLGPL 236
           MA   +  SS     A A+  + G RI+    R           P    G +R L+    
Sbjct: 1   MATQALISSSSISTSAEAARQIIGSRISQSVTRKASFVVRAASTPPVKQGANRQLWFA-- 58

Query: 237 SGEPPSYLSGEFPGDYGWDTAGLSADPET---FAKNREL---EVIHCRWAMLGALGCVFP 398
           S +  SYL G  PGD+G+D  GLS DPE    F + + L   EVI+ R+AMLGA G + P
Sbjct: 59  SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAP 117

Query: 399 ELLARNGV 422
           E+L + G+
Sbjct: 118 EILGKAGL 125

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>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast|
           precursor (CAB-10B) (LHCP)
          Length = 256

 Score = 52.0 bits (123), Expect = 6e-07
 Identities = 23/46 (50%), Positives = 27/46 (58%)
 Frame = +3

Query: 249 PSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 386
           P +L G  PGD+G+D  GL  DP      RE E+IH RWAM   LG
Sbjct: 68  PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113

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>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor|
           (LHCII type I CAB-1C) (LHCP) (Fragments)
          Length = 265

 Score = 38.9 bits (89), Expect = 0.005
 Identities = 24/49 (48%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPW 200
           MAA TMALSSP     A+KL+  AS + G GRITMR           PW
Sbjct: 1   MAAATMALSSPSFAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPW 49

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>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast|
           precursor (FCP)
          Length = 208

 Score = 38.5 bits (88), Expect = 0.007
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
 Frame = +3

Query: 225 LGPLSGEPPSYL-SGEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGALGCVFP 398
           + P +G+  S L  G  PGD G+D  GL+ +DP+ F   +E E+ H R AM+ A G +  
Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQ 191

Query: 399 ELLA 410
           E ++
Sbjct: 192 EAVS 195

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>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast|
           precursor (LHCII protein 4.2) (LHCB4.2)
          Length = 287

 Score = 36.2 bits (82), Expect = 0.035
 Identities = 29/96 (30%), Positives = 32/96 (33%), Gaps = 43/96 (44%)
 Frame = +3

Query: 249 PSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 335
           P YL G   GDYG+D  GL    E             AKN                    
Sbjct: 62  PEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPF 121

Query: 336 ------------RELEVIHCRWAMLGALGCVFPELL 407
                       RE E+IH RWAML  LG +  E L
Sbjct: 122 QPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWL 157



 Score = 33.9 bits (76), Expect = 0.18
 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +3

Query: 216 VLYLGPLSGEPPSYLSGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 386
           VL +G +  +  + L  E   +PG   +D  GL++DP   A+ +  E+ H R AM+G LG
Sbjct: 193 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252

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>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast|
           precursor (LHCII protein 4.1) (LHCB4.1)
          Length = 290

 Score = 35.8 bits (81), Expect = 0.046
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
 Frame = +3

Query: 216 VLYLGPLSGEPPSYLSGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 386
           VL +G +  +  + L  E   +PG   +D  GL+ADPE  A+ +  E+ H R AM+  LG
Sbjct: 196 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255



 Score = 34.3 bits (77), Expect = 0.13
 Identities = 34/110 (30%), Positives = 39/110 (35%), Gaps = 44/110 (40%)
 Frame = +3

Query: 210 DRVL-YLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN------ 335
           DR L Y G +S   P +L G   GDYG+D  GL    E             AKN      
Sbjct: 54  DRPLWYPGAIS---PDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVI 110

Query: 336 --------------------------RELEVIHCRWAMLGALGCVFPELL 407
                                     RE E+IH RWAML  LG +  E L
Sbjct: 111 GTRTEAADAKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWL 160

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>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast|
           precursor (LHCII protein 4.3) (LHCB4.3)
          Length = 276

 Score = 35.8 bits (81), Expect = 0.046
 Identities = 29/97 (29%), Positives = 33/97 (34%), Gaps = 43/97 (44%)
 Frame = +3

Query: 246 PPSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN------------------- 335
           PP +L G   GD G+D  GL    E             AKN                   
Sbjct: 65  PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124

Query: 336 -------------RELEVIHCRWAMLGALGCVFPELL 407
                        RE E+IH RWAMLG LG +  E L
Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEAL 161



 Score = 31.2 bits (69), Expect = 1.1
 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
 Frame = +3

Query: 216 VLYLGPLSGEPPSYLSGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 383
           VL +G +  +  S L  E   +PG Y +D  GL+ADPE     +  E+ H R AM+  L
Sbjct: 197 VLVVGYIEFQRNSELDPEKRIYPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254

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>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29|
          Length = 279

 Score = 35.0 bits (79), Expect = 0.079
 Identities = 32/107 (29%), Positives = 37/107 (34%), Gaps = 45/107 (42%)
 Frame = +3

Query: 249 PSYLSGEFPGDYGWDTAGLSADPE-----------TFAKN-------------------- 335
           P +L G  PGD G+D  GLS   E             AKN                    
Sbjct: 59  PEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSEN 118

Query: 336 --------------RELEVIHCRWAMLGALGCVFPELLARNGVKFGE 434
                         RE E+IH RWAML  LG +  E  A  GV + E
Sbjct: 119 RLAPYSEVFGLARFRECELIHGRWAMLACLGALVAE--ATTGVSWVE 163

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>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type I CAB-1A) (LHCP) (Fragments)
          Length = 265

 Score = 34.7 bits (78), Expect = 0.10
 Identities = 23/49 (46%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
 Frame = +3

Query: 72  MAATTMALSSP-----AMKLA-GASYVLGGGRITMRXXXXXXXXXXXPW 200
           MAA  MALSSP     A+KL+  AS   G GRITMR           PW
Sbjct: 1   MAAAAMALSSPSFAGQAVKLSPSASENSGNGRITMRKAVAKSAPSSSPW 49

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>BUN2_DROME (Q24523) Protein bunched, class 2 isoform (Protein shortsighted)|
          Length = 1206

 Score = 32.0 bits (71), Expect = 0.67
 Identities = 23/79 (29%), Positives = 41/79 (51%)
 Frame = -1

Query: 433 SPNLTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGNSPLR* 254
           S +L P  +SSSG +  S P   Q+Q ++S++      S S+ + + ++  SP N+  R 
Sbjct: 230 STSLAPKSSSSSGGSN-STPQQQQQQLVSSNN------SSSSSNNSFTKASSPNNNGARS 282

Query: 253 LGGSPESGPR*STRSGPYH 197
           +GG+  S    +T +   H
Sbjct: 283 VGGAATSAATGTTAAAGSH 301

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>GDF6_MOUSE (P43028) Growth/differentiation factor 6 precursor (GDF-6)|
           (Growth/differentiation factor 16)
          Length = 454

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = -2

Query: 369 WPSGNGSPPAHGSWRRSPGQQR 304
           WP+ +GSP A GSW  SPG++R
Sbjct: 312 WPAPSGSPDA-GSWLPSPGRRR 332

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>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor|
           (LHCII type I CAB-3A) (LHCP) (Fragments)
          Length = 267

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 6/36 (16%)
 Frame = +3

Query: 72  MAATTMALSSPA-----MKLA-GASYVLGGGRITMR 161
           MAA+TMALSS       +KLA  +S + G GRITMR
Sbjct: 1   MAASTMALSSSTFAGKTVKLAPSSSEITGNGRITMR 36

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>GDF6_RAT (Q6HA10) Growth/differentiation factor 6 precursor (GDF-6)|
           (Growth/differentiation factor 16)
          Length = 452

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = -2

Query: 369 WPSGNGSPPAHGSWRRSPGQQR 304
           WP+ +G+P A GSW  SPG++R
Sbjct: 310 WPAPSGAPDA-GSWLPSPGRRR 330

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>MUC13_MOUSE (P19467) Mucin-13 precursor (Cell surface antigen 114/A10)|
           (Lymphocyte antigen 64)
          Length = 573

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = -1

Query: 406 SSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGNS 266
           SSSG T P     +Q    +S +      SG A  P   Q  SPG+S
Sbjct: 27  SSSGGTSPPTTVQSQSPGSSSQASTTTSSSGGASPPTTVQSQSPGSS 73

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>GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180

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>GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180

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>GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180

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>GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLLGTDGHPFGWPSDGFPGPQGLYYCGVGADK---AYRRDIMEAHYR 180

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>GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180

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>GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHYR 180

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>YMT1_YEAST (Q04212) Hypothetical oxidoreductase YMR041C (EC 1.-.-.-)|
          Length = 335

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 27/85 (31%), Positives = 35/85 (41%), Gaps = 14/85 (16%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFP----------GDYGWDTAGLSADPETFAKNREL 344
           P+YGP  VLY     G   S L  EFP          G  G +    S D   F+ +R  
Sbjct: 56  PYYGPSEVLY-----GRALSNLRNEFPRDTYFICTKVGRIGAEEFNYSRDFVRFSVHRSC 110

Query: 345 EVIHCRWAMLGALGCV----FPELL 407
           E +H  +  L  L  V    FP++L
Sbjct: 111 ERLHTTYLDLVYLHDVEFVKFPDIL 135

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>STAG2_MOUSE (O35638) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)|
          Length = 1231

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +3

Query: 318  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 428
            ET +K R+++ I C   ++ +L  +F E++  NG  F
Sbjct: 902  ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNF 938

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>STAG2_HUMAN (Q8N3U4) Cohesin subunit SA-2 (Stromal antigen 2) (SCC3 homolog 2)|
          Length = 1231

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = +3

Query: 318  ETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKF 428
            ET +K R+++ I C   ++ +L  +F E++  NG  F
Sbjct: 902  ETMSKTRQIDKIQCAKTLILSLQQLFNEMIQENGYNF 938

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>SCN5A_HUMAN (Q14524) Sodium channel protein type 5 alpha subunit (Sodium|
           channel protein type V alpha subunit) (Voltage-gated
           sodium channel alpha subunit Nav1.5) (Sodium channel
           protein, cardiac muscle alpha-subunit) (HH1)
          Length = 2016

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = -3

Query: 410 SEQLGEDAAERA--EHGPAAMDHLQLTVLGEGL-RVSREPR 297
           +E+ GED   ++  E GP AM+HL LT    GL R S +PR
Sbjct: 486 TEECGEDRLPKSDSEDGPRAMNHLSLT---RGLSRTSMKPR 523

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>S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (GEF) (Huntington|
           disease gene regulatory region-binding protein 1)
           (HDBP-1)
          Length = 387

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 246 PPSYLSGEFPGDYGWDTAGLSADPET 323
           P SY S    GD+GWD A   + P T
Sbjct: 145 PGSYSSSSNSGDWGWDLASDQSSPST 170

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>GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 128 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADR---AYGRDIVEAHYR 180

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>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast|
           precursor
          Length = 270

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 22/51 (43%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +3

Query: 261 SGEFPGDYGWDTAGLSADPET--FAKNRELEVIHCRWAMLGALGCVFPELL 407
           SG F G   WD   L+A        + RE E+ H R AML ALG V  E L
Sbjct: 67  SGPFKGV--WDPLSLAATATVGDVRRWRESEITHGRVAMLAALGFVVGEQL 115

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>YAB9_YEAST (P31380) Hypothetical 128.5 kDa ATP-dependent helicase in ATS1-TPD3|
           intergenic region (EC 3.6.1.-)
          Length = 1131

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 16/53 (30%), Positives = 27/53 (50%)
 Frame = -1

Query: 421 TPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGNSP 263
           +P + +SS   +P++P++      +  SRF  K S  +E    S+P  P  SP
Sbjct: 20  SPTKVASSSPLKPTSPTVPDASVASLRSRFTFKPSDPSEGAHTSKP-LPSGSP 71

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>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 373

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 129 PWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADR---AYGRDIVEAHYR 181

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>GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase)
          Length = 392

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSAD 314
           PW+G ++   L  ++G P  +    FPG  G    G+ AD
Sbjct: 129 PWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGAD 168

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>TPP1_CANFA (Q9XSB8) Tripeptidyl-peptidase 1 precursor (EC 3.4.14.9)|
           (Tripeptidyl-peptidase I) (TPP-I) (Tripeptidyl
           aminopeptidase) (Lysosomal pepstatin insensitive
           protease) (LPIC)
          Length = 563

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = -1

Query: 436 ASPNLTPLRA-SSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAV 293
           +SP+L P    ++SG+  P   +++   W+ S+S  +  VSG++ S  V
Sbjct: 432 SSPHLPPSSYFNASGRAYPDVAALSDGYWVVSNSVPIPWVSGTSASTPV 480

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>TB182_MOUSE (P58871) 182 kDa tankyrase 1-binding protein (Fragment)|
          Length = 909

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 28/112 (25%), Positives = 37/112 (33%), Gaps = 11/112 (9%)
 Frame = -1

Query: 436 ASPNLTPLRASSSGK--------TQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP* 281
           ASP+    R+  SG         T  S+    QR+   S SR L +  G A      +P 
Sbjct: 617 ASPSSCLTRSPPSGSQSLLEGIMTASSSKGAPQRESAASGSRVLLEEEGLAAGAGQGEPQ 676

Query: 280 SPGNSPLR*LGGSPESGPR*STRSGPYH---GXXXXXXXXXXLRMVMRPPPR 134
            P  +PL      P S P+    +       G                PPPR
Sbjct: 677 EPSRAPL------PSSRPQPDGEASQVEEVDGTWSLTGAARQNEQASAPPPR 722

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>SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 2)
          Length = 1496

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
 Frame = -1

Query: 433  SPNLTPLRASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP*SPGNSPLR* 254
            +P    L      + + SAP+    Q + S+S+ L  ++ S+ SP+  +P +P   P   
Sbjct: 1330 APEAPSLAPKVPPRRKKSAPAAFHLQVLQSNSQLLQGLTCSSSSPSPPKPDTPLLYPQMA 1389

Query: 253  LGG----SPES-GPR*S-TRSGPYHG 194
            LG     SPE+ GPR +   +  +HG
Sbjct: 1390 LGTSSAISPETDGPRVTEPEAASFHG 1415

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>MYC_DROME (Q9W4S7) Myc protein (dMyc1) (dMyc) (Diminutive protein)|
          Length = 717

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -1

Query: 436 ASPNLTPLRASSSGKTQPSAPSMAQRQWITSSS 338
           ASP+ +PL   SS  +  S+ S +Q  + TSSS
Sbjct: 491 ASPSYSPLSVDSSNVSSSSSSSSSQSSFTTSSS 523

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>GLNA_SQUAC (P41320) Glutamine synthetase, mitochondrial precursor (EC 6.3.1.2)|
           (Glutamate--ammonia ligase)
          Length = 403

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 158 PWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGADK---AYGRDIVEAHYR 210

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>MRS2_ASPFU (Q4WCV3) Inner membrane magnesium transporter mrs2, mitochondrial|
           precursor (RNA-splicing protein mrs2)
          Length = 597

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 403 SSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAESPAVSQP 284
           SS   +PSAPS    +++ S S FL+  S     P+ S+P
Sbjct: 3   SSSHLKPSAPSATLLRFLRSQSDFLSVNSSRCARPSRSKP 42

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>GLNA_CHICK (P16580) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 373

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = +3

Query: 195 PWYGPDRVLYLGPLSGEPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIHCR 362
           PW+G ++   L    G P  + S  FPG  G    G+ AD    A  R++   H R
Sbjct: 129 PWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGADK---AYGRDIVEAHYR 181


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,975,642
Number of Sequences: 219361
Number of extensions: 807528
Number of successful extensions: 3217
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 3041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3172
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result