>ref|NM_188013.1| Oryza sativa (japonica cultivar-group), Ozsa8433 predicted mRNA
          Length = 675

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 101/118 (85%), Gaps = 3/118 (2%)
 Strand = Plus / Plus

                                                                       
Query: 106 gatggcttcgatcgtgctgctgctgtcggagcttctcggcggcgcggggagcacaagcat 165
           |||||| |||||||||||||||||||||||||| |||||||||| |   ||||| ||| |
Sbjct: 423 gatggcgtcgatcgtgctgctgctgtcggagctgctcggcggcgag---agcaccagcgt 479

                                                                     
Query: 166 gctggcggccaactgctacatgggcggccacagcctgcgggagttccggcccgcggcg 223
             |||||||  |||| |||||| |||| |||||||| |||||||||||||||| ||||
Sbjct: 480 aatggcggctgactggtacatgagcggacacagcctccgggagttccggcccgtggcg 537



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 305 gaggatctctccgccgtgtccaggatatcggtggacgtcatgtggcc 351
           ||||||||| ||||||||||| ||||  |||| ||||| ||||||||
Sbjct: 625 gaggatctcgccgccgtgtcccggatcgcggtcgacgtgatgtggcc 671

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 101/118 (85%), Gaps = 3/118 (2%)
 Strand = Plus / Plus

                                                                           
Query: 106     gatggcttcgatcgtgctgctgctgtcggagcttctcggcggcgcggggagcacaagcat 165
               |||||| |||||||||||||||||||||||||| |||||||||| |   ||||| ||| |
Sbjct: 9113001 gatggcgtcgatcgtgctgctgctgtcggagctgctcggcggcgag---agcaccagcgt 9113057

                                                                         
Query: 166     gctggcggccaactgctacatgggcggccacagcctgcgggagttccggcccgcggcg 223
                 |||||||  |||| |||||| |||| |||||||| |||||||||||||||| ||||
Sbjct: 9113058 aatggcggctgactggtacatgagcggacacagcctccgggagttccggcccgtggcg 9113115



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                              
Query: 305     gaggatctctccgccgtgtccaggatatcggtggacgtcatgtggcc 351
               ||||||||| ||||||||||| ||||  |||| ||||| ||||||||
Sbjct: 9113203 gaggatctcgccgccgtgtcccggatcgcggtcgacgtgatgtggcc 9113249

>dbj|AP001080.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              clone:P0499C11
          Length = 151369

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 101/118 (85%), Gaps = 3/118 (2%)
 Strand = Plus / Plus

                                                                          
Query: 106    gatggcttcgatcgtgctgctgctgtcggagcttctcggcggcgcggggagcacaagcat 165
              |||||| |||||||||||||||||||||||||| |||||||||| |   ||||| ||| |
Sbjct: 142008 gatggcgtcgatcgtgctgctgctgtcggagctgctcggcggcgag---agcaccagcgt 142064

                                                                        
Query: 166    gctggcggccaactgctacatgggcggccacagcctgcgggagttccggcccgcggcg 223
                |||||||  |||| |||||| |||| |||||||| |||||||||||||||| ||||
Sbjct: 142065 aatggcggctgactggtacatgagcggacacagcctccgggagttccggcccgtggcg 142122



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                             
Query: 305    gaggatctctccgccgtgtccaggatatcggtggacgtcatgtggcc 351
              ||||||||| ||||||||||| ||||  |||| ||||| ||||||||
Sbjct: 142210 gaggatctcgccgccgtgtcccggatcgcggtcgacgtgatgtggcc 142256

>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0011D01
          Length = 168655

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 101/118 (85%), Gaps = 3/118 (2%)
 Strand = Plus / Plus

                                                                         
Query: 106   gatggcttcgatcgtgctgctgctgtcggagcttctcggcggcgcggggagcacaagcat 165
             |||||| |||||||||||||||||||||||||| |||||||||| |   ||||| ||| |
Sbjct: 13383 gatggcgtcgatcgtgctgctgctgtcggagctgctcggcggcgag---agcaccagcgt 13439

                                                                       
Query: 166   gctggcggccaactgctacatgggcggccacagcctgcgggagttccggcccgcggcg 223
               |||||||  |||| |||||| |||| |||||||| |||||||||||||||| ||||
Sbjct: 13440 aatggcggctgactggtacatgagcggacacagcctccgggagttccggcccgtggcg 13497



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 305   gaggatctctccgccgtgtccaggatatcggtggacgtcatgtggcc 351
             ||||||||| ||||||||||| ||||  |||| ||||| ||||||||
Sbjct: 13585 gaggatctcgccgccgtgtcccggatcgcggtcgacgtgatgtggcc 13631

>dbj|AK121188.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085H22, full
           insert sequence
          Length = 558

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 101/118 (85%), Gaps = 3/118 (2%)
 Strand = Plus / Plus

                                                                       
Query: 106 gatggcttcgatcgtgctgctgctgtcggagcttctcggcggcgcggggagcacaagcat 165
           |||||| |||||||||||||||||||||||||| |||||||||| |   ||||| ||| |
Sbjct: 135 gatggcgtcgatcgtgctgctgctgtcggagctgctcggcggcgag---agcaccagcgt 191

                                                                     
Query: 166 gctggcggccaactgctacatgggcggccacagcctgcgggagttccggcccgcggcg 223
             |||||||  |||| |||||| |||| |||||||| |||||||||||||||| ||||
Sbjct: 192 aatggcggctgactggtacatgagcggacacagcctccgggagttccggcccgtggcg 249



 Score = 46.1 bits (23), Expect = 0.097
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 305 gaggatctctccgccgtgtccaggatatcggtggacgtcatgtggcc 351
           ||||||||| ||||||||||| ||||  |||| ||||| ||||||||
Sbjct: 337 gaggatctcgccgccgtgtcccggatcgcggtcgacgtgatgtggcc 383

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 192     gccacagcctgcgggagttccggcccg 218
               |||||||| ||||||||||||||||||
Sbjct: 1176331 gccacagcgtgcgggagttccggcccg 1176305

>gb|BC046821.1| Mus musculus RIKEN cDNA 4933439F18 gene, mRNA (cDNA clone MGC:61252
           IMAGE:6400140), complete cds
          Length = 4252

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 235 gcgggagccgaagctgcgggga 256
           ||||||||||||||||||||||
Sbjct: 270 gcgggagccgaagctgcgggga 249

>gb|BC052418.1| Mus musculus RIKEN cDNA 4933439F18 gene, mRNA (cDNA clone MGC:63350
           IMAGE:6401069), complete cds
          Length = 4264

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 235 gcgggagccgaagctgcgggga 256
           ||||||||||||||||||||||
Sbjct: 298 gcgggagccgaagctgcgggga 277

>gb|BC044901.1| Mus musculus RIKEN cDNA 4933439F18 gene, mRNA (cDNA clone MGC:30445
           IMAGE:3660276), complete cds
          Length = 4087

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 235 gcgggagccgaagctgcgggga 256
           ||||||||||||||||||||||
Sbjct: 158 gcgggagccgaagctgcgggga 137

>emb|AL596090.11| Mouse DNA sequence from clone RP23-135F6 on chromosome 11 Contains the 5'
              end of the gene for the likely ortholog of H. sapiens
              target of myb1-like 2 (chicken) (TOM1L2) (A730055F12Rik), a
              glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene,
              the gene for a novel Leucine Rich Repeat domain-containing
              protein (4930449E07Rik), the Atpaf2 gene for ATP synthase
              mitochondrial F1 complex assembly factor 2, the gene for a
              novel protein (4933439F18Rik), an acid phosphatase 1
              soluble (Acp1) pseudogene, a ribosomal protein S4, X-linked
              (Rps4x) pseudogene, the Drg2 gene for developmentally
              regulated GTP binding protein 2, the 5' end of the Myo15
              gene for myosin XV and four CpG islands, complete sequence
          Length = 207440

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 235    gcgggagccgaagctgcgggga 256
              ||||||||||||||||||||||
Sbjct: 139109 gcgggagccgaagctgcgggga 139088

>dbj|AK143178.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
           library, clone:E130302D04 product:hypothetical
           Proline-rich region profile/Cysteine-rich region profile
           containing protein, full insert sequence
          Length = 3044

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 235 gcgggagccgaagctgcgggga 256
           ||||||||||||||||||||||
Sbjct: 292 gcgggagccgaagctgcgggga 271

>dbj|AK142753.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched
           library, clone:D830050D11 product:hypothetical
           Proline-rich region profile/Cysteine-rich region profile
           containing protein, full insert sequence
          Length = 4367

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 235 gcgggagccgaagctgcgggga 256
           ||||||||||||||||||||||
Sbjct: 258 gcgggagccgaagctgcgggga 237

>dbj|AK164644.1| Mus musculus 13 days embryo stomach cDNA, RIKEN full-length
           enriched library, clone:D530014G16 product:hypothetical
           protein, full insert sequence
          Length = 4259

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 235 gcgggagccgaagctgcgggga 256
           ||||||||||||||||||||||
Sbjct: 323 gcgggagccgaagctgcgggga 302

>dbj|AK017120.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4933439F18 product:RIKEN cDNA 4933439F18
           gene, full insert sequence
          Length = 1717

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 235 gcgggagccgaagctgcgggga 256
           ||||||||||||||||||||||
Sbjct: 456 gcgggagccgaagctgcgggga 435

>dbj|AK039435.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length
           enriched library, clone:A330042K10 product:hypothetical
           protein, full insert sequence
          Length = 2342

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 235 gcgggagccgaagctgcgggga 256
           ||||||||||||||||||||||
Sbjct: 340 gcgggagccgaagctgcgggga 319

>ref|NM_025757.3| Mus musculus RIKEN cDNA 4933439F18 gene (4933439F18Rik), mRNA
          Length = 4264

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 235 gcgggagccgaagctgcgggga 256
           ||||||||||||||||||||||
Sbjct: 298 gcgggagccgaagctgcgggga 277

>ref|NM_143429.1| Drosophila melanogaster CG14507-RB (CG14507), mRNA
          Length = 3029

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 278  gacgaggagtcgtcttcgttg 298
            |||||||||||||||||||||
Sbjct: 2320 gacgaggagtcgtcttcgttg 2300

>ref|NM_143428.2| Drosophila melanogaster Brd8 CG14514-RA (Brd8), mRNA
          Length = 2794

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 278  gacgaggagtcgtcttcgttg 298
            |||||||||||||||||||||
Sbjct: 1919 gacgaggagtcgtcttcgttg 1939

>dbj|AK077759.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:5730600J11 product:RIKEN cDNA
           4933439F18 gene, full insert sequence
          Length = 1475

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 235 gcgggagccgaagctgcgggg 255
           |||||||||||||||||||||
Sbjct: 23  gcgggagccgaagctgcgggg 3

>gb|AC007855.5|AC007855 Drosophila melanogaster, chromosome 3R, region 98F-99A, BAC clone
              BACR22E21, complete sequence
          Length = 183576

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 278    gacgaggagtcgtcttcgttg 298
              |||||||||||||||||||||
Sbjct: 121027 gacgaggagtcgtcttcgttg 121047

>gb|AE003768.2| Drosophila melanogaster chromosome 3R, section 106 of 118 of the complete
              sequence
          Length = 243118

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 278    gacgaggagtcgtcttcgttg 298
              |||||||||||||||||||||
Sbjct: 192699 gacgaggagtcgtcttcgttg 192719

>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 371     gagaggtcgattccctcgat 390
               ||||||||||||||||||||
Sbjct: 4401453 gagaggtcgattccctcgat 4401472

>gb|AY702243.1| Anabaena flos-aquae strain NIES73 phycocyanin beta subunit and
           phycocyanin alpha subunit genes, partial cds
          Length = 625

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 111 cttcgatcgtgctgctgctg 130
           ||||||||||||||||||||
Sbjct: 215 cttcgatcgtgctgctgctg 234

>gb|AY702228.1| Anabaena kisseleviana strain TAC34 phycocyanin beta subunit and
           phycocyanin alpha subunit genes, partial cds
          Length = 629

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 111 cttcgatcgtgctgctgctg 130
           ||||||||||||||||||||
Sbjct: 216 cttcgatcgtgctgctgctg 235

>gb|AY702227.1| Anabaena kisseleviana strain NIES74 phycocyanin beta subunit and
           phycocyanin alpha subunit genes, partial cds
          Length = 630

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 111 cttcgatcgtgctgctgctg 130
           ||||||||||||||||||||
Sbjct: 217 cttcgatcgtgctgctgctg 236

>gb|AY942908.1| Uncultured cyanobacterium clone P3_26 cpcBA operon, partial
           sequence
          Length = 373

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 111 cttcgatcgtgctgctgctg 130
           ||||||||||||||||||||
Sbjct: 246 cttcgatcgtgctgctgctg 265

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 131 tcggagcttctcggcggcgc 150
           ||||||||||||||||||||
Sbjct: 951 tcggagcttctcggcggcgc 932

>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat
          Length = 243019

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   ggccaaggacgaggagtcgt 290
             ||||||||||||||||||||
Sbjct: 59785 ggccaaggacgaggagtcgt 59766

>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat
          Length = 273746

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 271   ggccaaggacgaggagtcgt 290
             ||||||||||||||||||||
Sbjct: 59785 ggccaaggacgaggagtcgt 59766

>gb|M28053.1|BACCGTD Bacillus sp. cyclomaltodextrin glucanotransferase gene, complete
           cds
          Length = 2648

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 242 ccgaagctgcggggaataacctcc 265
           ||||||||||||||||| ||||||
Sbjct: 171 ccgaagctgcggggaatcacctcc 148


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,273,670
Number of Sequences: 3902068
Number of extensions: 3273670
Number of successful extensions: 63976
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63770
Number of HSP's gapped (non-prelim): 206
length of query: 444
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 422
effective length of database: 17,147,199,772
effective search space: 7236118303784
effective search space used: 7236118303784
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)