>PSBW_SPIOL (Q41387) Photosystem II reaction center W protein, chloroplast|
           precursor (PSII 6.1 kDa protein)
          Length = 137

 Score = 34.7 bits (78), Expect = 0.060
 Identities = 22/66 (33%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
 Frame = +1

Query: 151 LGLPQLRTRGERVRCSYSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LALVDERMS 321
           LGLP + T+  +V CS                                   +ALVDERMS
Sbjct: 32  LGLPSM-TKRSKVTCSIENKPSTTETTTTTNKSMGASLLAAAAAATISNPAMALVDERMS 90

Query: 322 TEGTGL 339
           TEGTGL
Sbjct: 91  TEGTGL 96

>PSBW_WHEAT (P55967) Photosystem II reaction center W protein (PSII 6.1 kDa|
           protein) (Fragment)
          Length = 20

 Score = 30.8 bits (68), Expect = 0.87
 Identities = 14/14 (100%), Positives = 14/14 (100%)
 Frame = +1

Query: 301 LVDERMSTEGTGLS 342
           LVDERMSTEGTGLS
Sbjct: 1   LVDERMSTEGTGLS 14


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,518,229
Number of Sequences: 219361
Number of extensions: 128856
Number of successful extensions: 287
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)