ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet102g09 |
|---|---|
| Clone Library Name | barley_pub |
>CDD_SHEON (Q8EDG1) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 296 Score = 60.8 bits (146), Expect = 1e-09 Identities = 30/58 (51%), Positives = 38/58 (65%) Frame = +2 Query: 257 DLLPLLIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 ++L L+P A A+PPIS F VGA+ G+SG +Y G NLE G LF +VHAEQ I Sbjct: 50 EVLLALLPIAAALAKPPISEFYVGAIAKGKSGDIYMGANLELPGEALFHSVHAEQSAI 107
>CDD_PHOPR (Q6LRI0) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 295 Score = 59.3 bits (142), Expect = 4e-09 Identities = 30/58 (51%), Positives = 39/58 (67%) Frame = +2 Query: 257 DLLPLLIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 +L L+P A + PIS+F VGA+ GESGR+Y G N+EF+GA L Q +HAEQ I Sbjct: 51 ELRVALLPIAAAYSVAPISKFFVGAIVRGESGRLYFGANMEFVGASLSQTIHAEQSAI 108
>CDD_PHOLL (Q7N6K3) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 58.5 bits (140), Expect = 6e-09 Identities = 28/53 (52%), Positives = 34/53 (64%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 L+P A + PIS F VGA+ GESG +Y G N+EF G PL Q +HAEQ I Sbjct: 56 LLPLAAASSLTPISHFNVGAIARGESGNLYFGANMEFAGVPLQQTIHAEQCAI 108
>CDD_VIBCH (Q9KSM5) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 295 Score = 56.6 bits (135), Expect = 2e-08 Identities = 31/58 (53%), Positives = 36/58 (62%) Frame = +2 Query: 257 DLLPLLIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 DL L+P A + PIS F VGA+ G SGR+Y G N+EF GA L Q VHAEQ I Sbjct: 51 DLRVALLPIAAAYSYAPISEFYVGAIVRGISGRLYLGANMEFTGAQLGQTVHAEQCAI 108
>CDD_SHISS (Q3Z062) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 56.2 bits (134), Expect = 3e-08 Identities = 28/53 (52%), Positives = 34/53 (64%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 L+P A AR P+S F VGA+ G SG Y G N+EF+GA + Q VHAEQ I Sbjct: 56 LLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVHAEQSAI 108
>CDD_SHIFL (P0ABF7) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 56.2 bits (134), Expect = 3e-08 Identities = 28/53 (52%), Positives = 34/53 (64%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 L+P A AR P+S F VGA+ G SG Y G N+EF+GA + Q VHAEQ I Sbjct: 56 LLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVHAEQSAI 108
>CDD_SHIBS (Q322V3) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 56.2 bits (134), Expect = 3e-08 Identities = 28/53 (52%), Positives = 34/53 (64%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 L+P A AR P+S F VGA+ G SG Y G N+EF+GA + Q VHAEQ I Sbjct: 56 LLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVHAEQSAI 108
>CDD_ECOLI (P0ABF6) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 56.2 bits (134), Expect = 3e-08 Identities = 28/53 (52%), Positives = 34/53 (64%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 L+P A AR P+S F VGA+ G SG Y G N+EF+GA + Q VHAEQ I Sbjct: 56 LLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVHAEQSAI 108
>CDD_ECOL6 (Q8FFV3) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 56.2 bits (134), Expect = 3e-08 Identities = 28/53 (52%), Positives = 34/53 (64%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 L+P A AR P+S F VGA+ G SG Y G N+EF+GA + Q VHAEQ I Sbjct: 56 LLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVHAEQSAI 108
>CDD_ECO57 (Q8X648) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 56.2 bits (134), Expect = 3e-08 Identities = 28/53 (52%), Positives = 34/53 (64%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 L+P A AR P+S F VGA+ G SG Y G N+EF+GA + Q VHAEQ I Sbjct: 56 LLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVHAEQSAI 108
>CDD_YERPS (Q66C79) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 55.8 bits (133), Expect = 4e-08 Identities = 27/50 (54%), Positives = 32/50 (64%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQ 421 L+P A A PIS F VGA+ G+SG Y G N+EF G PL Q +HAEQ Sbjct: 56 LLPLATACALTPISHFNVGAIARGKSGNFYFGANMEFRGVPLQQTIHAEQ 105
>CDD_YERPE (Q8ZG08) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 55.8 bits (133), Expect = 4e-08 Identities = 27/50 (54%), Positives = 32/50 (64%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQ 421 L+P A A PIS F VGA+ G+SG Y G N+EF G PL Q +HAEQ Sbjct: 56 LLPLATACALTPISHFNVGAIARGKSGNFYFGANMEFRGVPLQQTIHAEQ 105
>CDD_VIBPA (Q87Q52) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 295 Score = 54.3 bits (129), Expect = 1e-07 Identities = 29/58 (50%), Positives = 35/58 (60%) Frame = +2 Query: 257 DLLPLLIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 +L L+P A + PIS F VGA+ G SGR+Y G N+EF G L Q VHAEQ I Sbjct: 51 ELRVALLPFAAAYSYAPISEFYVGAIVRGLSGRLYFGANMEFFGVQLGQTVHAEQSAI 108
>CDD_SALTY (Q8ZNM0) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 54.3 bits (129), Expect = 1e-07 Identities = 28/53 (52%), Positives = 33/53 (62%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 L+P A AR +S F VGA+ G SG Y G N+EFLGA + Q VHAEQ I Sbjct: 56 LLPLAAACARTDLSHFNVGAIARGVSGNWYFGANMEFLGATMQQTVHAEQSAI 108
>CDD_SALTI (Q8Z5A8) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 54.3 bits (129), Expect = 1e-07 Identities = 28/53 (52%), Positives = 33/53 (62%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 L+P A AR +S F VGA+ G SG Y G N+EFLGA + Q VHAEQ I Sbjct: 56 LLPLAAACARTDLSHFNVGAIARGVSGNWYFGANMEFLGATMQQTVHAEQSAI 108
>CDD_SALPA (Q5PE68) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 54.3 bits (129), Expect = 1e-07 Identities = 28/53 (52%), Positives = 33/53 (62%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 L+P A AR +S F VGA+ G SG Y G N+EFLGA + Q VHAEQ I Sbjct: 56 LLPLAAACARTDLSHFNVGAIARGVSGNWYFGANMEFLGATMQQTVHAEQSAI 108
>CDD_SALCH (Q57MF5) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 54.3 bits (129), Expect = 1e-07 Identities = 28/53 (52%), Positives = 33/53 (62%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 L+P A AR +S F VGA+ G SG Y G N+EFLGA + Q VHAEQ I Sbjct: 56 LLPLAAACARTDLSHFNVGAIARGVSGNWYFGANMEFLGATMQQTVHAEQSAI 108
>CDD_SHIDS (Q32EM3) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 53.5 bits (127), Expect = 2e-07 Identities = 27/53 (50%), Positives = 33/53 (62%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 L+P A A P+S F VGA+ G SG Y G N+EF+GA + Q VHAEQ I Sbjct: 56 LLPLAAACALTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVHAEQSAI 108
>CDD_MANSM (Q65RG8) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 296 Score = 53.1 bits (126), Expect = 3e-07 Identities = 26/52 (50%), Positives = 33/52 (63%) Frame = +2 Query: 275 IPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 +P A A PIS+F VGA+ +G+SG Y G N EF+ A + Q VHAEQ I Sbjct: 61 LPVAACYALTPISQFNVGAIAIGQSGSFYFGANQEFVAASMQQTVHAEQSAI 112
>CDD_PASMU (Q9CP11) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 294 Score = 51.2 bits (121), Expect = 1e-06 Identities = 25/53 (47%), Positives = 32/53 (60%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 L+P A + PIS+F VGA+ +G+ G Y G NLEF + Q VHAEQ I Sbjct: 57 LLPIAAAYSLAPISQFHVGAIAIGQRGAYYFGANLEFASTHIQQTVHAEQSAI 109
>CDD_HAEDU (Q7VMJ6) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 299 Score = 50.4 bits (119), Expect = 2e-06 Identities = 26/52 (50%), Positives = 30/52 (57%) Frame = +2 Query: 275 IPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 +P A A P+S F VGAV +G SG Y G N EF G + Q VHAEQ I Sbjct: 65 VPIAACYALTPVSHFCVGAVAIGLSGSFYFGANQEFAGIAMQQTVHAEQSAI 116
>CDD_VIBVY (Q7MK48) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 295 Score = 50.1 bits (118), Expect = 2e-06 Identities = 27/53 (50%), Positives = 32/53 (60%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 L+P A + PIS F VGA+ G SG +Y G N+EF G L Q VHAEQ I Sbjct: 56 LLPFAAAYSYAPISEFYVGAIVRGLSGTLYFGANMEFDGVQLGQTVHAEQSAI 108
>CDD_VIBVU (Q8DA31) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 295 Score = 50.1 bits (118), Expect = 2e-06 Identities = 27/53 (50%), Positives = 32/53 (60%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 L+P A + PIS F VGA+ G SG +Y G N+EF G L Q VHAEQ I Sbjct: 56 LLPFAAAYSYAPISEFYVGAIVRGLSGALYFGANMEFDGVQLGQTVHAEQSAI 108
>CDD_ERWCT (Q6D3B4) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 296 Score = 48.9 bits (115), Expect = 5e-06 Identities = 25/53 (47%), Positives = 30/53 (56%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 L+P A A+ IS F VGA+ G SG Y G N+EF L Q VHAEQ + Sbjct: 56 LLPLAAACAQASISNFQVGAIAQGLSGNFYFGANMEFTAVQLQQTVHAEQSAV 108
>CDD_HAEIN (P44325) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 292 Score = 47.4 bits (111), Expect = 1e-05 Identities = 23/53 (43%), Positives = 30/53 (56%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 L+P A + IS F VGA+ +GE G Y G N EF + + Q +HAEQ I Sbjct: 55 LLPLAASYSHTAISHFNVGAIAIGEQGDFYFGANQEFANSAIQQTIHAEQSAI 107
>CDD_HAEI8 (Q4QK60) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 292 Score = 47.4 bits (111), Expect = 1e-05 Identities = 23/53 (43%), Positives = 30/53 (56%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 L+P A + IS F VGA+ +GE G Y G N EF + + Q +HAEQ I Sbjct: 55 LLPLAASYSHTAISHFNVGAIAIGEQGDFYFGANQEFANSAIQQTIHAEQSAI 107
>CDD_VIBF1 (Q5E4R6) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 297 Score = 45.8 bits (107), Expect = 4e-05 Identities = 23/53 (43%), Positives = 31/53 (58%) Frame = +2 Query: 272 LIPSAMLRARPPISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 L+P A + PIS F VGA+ G +G +Y G N+E+ L Q +HAEQ I Sbjct: 58 LLPLAAAFSVAPISNFYVGAIARGLTGNLYFGANMEYNDVQLGQTIHAEQSAI 110
>CDD_PSEHT (Q3IBX5) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 309 Score = 40.0 bits (92), Expect = 0.002 Identities = 29/61 (47%), Positives = 32/61 (52%), Gaps = 4/61 (6%) Frame = +2 Query: 260 LLPLLIPSAMLRARPPISRFPVGAV--GLGESGRV--YAGVNLEFLGAPLFQAVHAEQXL 427 LL L+P A A P+S F VGA+ L ESG V Y G N EF L VHAEQ Sbjct: 59 LLQGLVPLASEFAVAPVSNFHVGAIVKALDESGEVNFYFGANAEFNRQALSLVVHAEQSA 118 Query: 428 I 430 I Sbjct: 119 I 119
>KE4_PIG (Q29175) Zinc transporter SLC39A7 (Solute carrier family 39 member| 7) (Histidine-rich membrane protein Ke4) (Fragments) Length = 155 Score = 35.0 bits (79), Expect = 0.075 Identities = 20/51 (39%), Positives = 27/51 (52%) Frame = -1 Query: 415 GVDRLEERGAQELEVHAGVDASALAKPDGAHGEPRDRGARPQHSRRDQQGQ 263 GV E++ ++E E AG A K G P+D RPQHS ++QGQ Sbjct: 71 GVSSKEKQSSEEEEKEAG----ASRKRRGGSTRPKDGPVRPQHSGEEKQGQ 117
>CDD_MOUSE (P56389) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| Length = 146 Score = 34.3 bits (77), Expect = 0.13 Identities = 20/42 (47%), Positives = 25/42 (59%) Frame = +2 Query: 305 PISRFPVGAVGLGESGRVYAGVNLEFLGAPLFQAVHAEQXLI 430 P SRFPVGA L GR+++G N+E PL V AE+ I Sbjct: 32 PYSRFPVGAALLTGDGRIFSGCNIENACYPL--GVCAERTAI 71
>CDD_BACPY (Q9S3M0) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 136 Score = 33.9 bits (76), Expect = 0.17 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +2 Query: 293 RARPPISRFPVGAVGLGESGRVYAGVNLE 379 +A P S+FPVGA L E G +Y G N+E Sbjct: 16 QAYVPYSKFPVGAALLAEDGTIYHGCNIE 44
>CDD_HUMAN (P32320) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| Length = 146 Score = 32.7 bits (73), Expect = 0.37 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +2 Query: 305 PISRFPVGAVGLGESGRVYAGVNLEFLGAPL 397 P S FPVGA L + GR++ G N+E PL Sbjct: 32 PYSHFPVGAALLTQEGRIFKGCNIENACYPL 62
>SOK2_YEAST (P53438) Protein SOK2| Length = 785 Score = 30.4 bits (67), Expect = 1.9 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%) Frame = -2 Query: 405 AWKRGAPRNSR----FTPA*TRPLSPSPTAPTGNREIGGRARSIAEGIS 271 ++ R A NS TPA ++PL+PSPT N+ SI GI+ Sbjct: 635 SYPRNATMNSASTLGITPADSKPLTPSPTTTNTNQSSESNVGSIHTGIT 683
>CDD_BACSU (P19079) Cytidine deaminase (EC 3.5.4.5) (Cytidine aminohydrolase)| (CDA) Length = 136 Score = 30.4 bits (67), Expect = 1.9 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +2 Query: 296 ARPPISRFPVGAVGLGESGRVYAGVNLE 379 A P S+F VGA L + G+VY G N+E Sbjct: 17 AYAPYSKFQVGAALLTKDGKVYRGCNIE 44
>GLGC_ERWCT (Q6CZK2) Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)| (ADP-glucose synthase) (ADP-glucose pyrophosphorylase) (ADPGlc PPase) Length = 425 Score = 30.0 bits (66), Expect = 2.4 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 5/66 (7%) Frame = -2 Query: 195 NPGSSTASGFVVIFSSPIAQI*LETTL----SIYDFFF-LYPVIVPRRLRWRERLDVSSK 31 NP + AS + +F++ LET S +DF L P IV +RL W +S Sbjct: 205 NPDMALASMGIYVFNADYLYQLLETDRNASDSAHDFGQDLIPKIVSQRLAWAHPFTLSCV 264 Query: 30 SGGEDE 13 + GEDE Sbjct: 265 TSGEDE 270
>NSBP1_MOUSE (Q9JL35) Nucleosome-binding protein 1 (Nucleosome-binding protein| 45) (NBP-45) (GARP45 protein) Length = 406 Score = 28.5 bits (62), Expect = 7.1 Identities = 15/46 (32%), Positives = 22/46 (47%) Frame = -1 Query: 400 EERGAQELEVHAGVDASALAKPDGAHGEPRDRGARPQHSRRDQQGQ 263 EE G ++L H V L + DG G+P + G H ++GQ Sbjct: 241 EEDGKEDL--HEEVGKEDLHEEDGKEGQPEEDGKEIHHEEDGKEGQ 284
>PKHD1_HUMAN (Q8TCZ9) Polycystic kidney and hepatic disease 1 precursor| (Fibrocystin) (Polyductin) (Tigmin) Length = 4074 Score = 28.5 bits (62), Expect = 7.1 Identities = 15/37 (40%), Positives = 21/37 (56%) Frame = -2 Query: 192 PGSSTASGFVVIFSSPIAQI*LETTLSIYDFFFLYPV 82 P S SGFV +FSS A I T+ S+ F+ + P+ Sbjct: 3429 PVVSVTSGFVDVFSSVNANIPCSTSGSVSTFYSILPI 3465
>PKD2_HUMAN (Q13563) Polycystin-2 (Autosomal dominant polycystic kidney disease| type II protein) (Polycystwin) (R48321) Length = 968 Score = 28.1 bits (61), Expect = 9.2 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 5/48 (10%) Frame = -1 Query: 409 DRLEERGAQELEVHAGVDASA-----LAKPDGAHGEPRDRGARPQHSR 281 +++E +ELE DA++ L P G +G+PR R +RP S+ Sbjct: 903 EQMERLVREELERWESDDAASQISHGLGTPVGLNGQPRPRSSRPSSSQ 950 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,010,053 Number of Sequences: 219361 Number of extensions: 851561 Number of successful extensions: 2942 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 2804 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2933 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
