ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet102g02 |
|---|---|
| Clone Library Name | barley_pub |
>Y24K_STRGR (P12752) Hypothetical 24.7 kDa protein in photolyase 5'region| Length = 238 Score = 33.5 bits (75), Expect = 0.13 Identities = 14/34 (41%), Positives = 20/34 (58%) Frame = +1 Query: 130 ASDSTGSTAPPTPSKCSRMLPPSPGASSTSRTPQ 231 +S +T TA P P +C PP PG++S S P+ Sbjct: 13 SSSATWRTARPAPRRCGSCRPPPPGSASPSPRPR 46
>SWC5_USTMA (Q4P6D5) SWR1-complex protein 5| Length = 376 Score = 32.0 bits (71), Expect = 0.37 Identities = 16/37 (43%), Positives = 23/37 (62%) Frame = +1 Query: 118 AQPAASDSTGSTAPPTPSKCSRMLPPSPGASSTSRTP 228 +Q A+ ST S+AP + S LP SP ++STS +P Sbjct: 246 SQIASPTSTTSSAPAPSASASAPLPTSPASTSTSSSP 282
>MAGE1_HUMAN (Q9HCI5) Melanoma-associated antigen E1 (MAGE-E1 antigen)| (Hepatocellular carcinoma-associated protein 1) Length = 957 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%) Frame = +1 Query: 124 PAASDSTGSTAPPTPSKC-SRMLPPSPGASSTSRTP 228 P +S+ ++ PPT S+ S LPP+PG +++ P Sbjct: 142 PTSSEEPSTSVPPTASEVPSTSLPPTPGEGTSTSVP 177
>DDI1_YEAST (P40087) DNA damage-inducible protein DDI1 (v-SNARE-master 1)| Length = 428 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = +1 Query: 133 SDSTGSTAPPTPSKCSRMLPPSPGA 207 S +T S P TP+K S LPP PGA Sbjct: 336 SVTTSSDKPLTPTKTSSTLPPQPGA 360
>MAGE1_MACFA (Q9BE18) Melanoma-associated antigen E1 (MAGE-E1 antigen)| Length = 957 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 1/37 (2%) Frame = +1 Query: 121 QPAASDSTGSTAPPTP-SKCSRMLPPSPGASSTSRTP 228 QP A + ++ PPTP S +PP+PG ++ P Sbjct: 297 QPTAGEGPSTSVPPTPCGGLSTSVPPTPGEGLSTSVP 333
>HPAI_ECOLI (Q47098) 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC| 4.1.2.-) (HHED aldolase) Length = 262 Score = 29.6 bits (65), Expect = 1.8 Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 6/56 (10%) Frame = -2 Query: 316 SMVLPLVEAMPFVSRTARVTVSPSAGLRSEGSG------WLKMPQVKEEASESTCL 167 ++++P+V+ R T P AG+R GS W ++P ++A++ C+ Sbjct: 89 TLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCV 144
>HYSA_PROAC (Q59634) Hyaluronate lyase precursor (EC 4.2.2.1) (Hyaluronidase)| (HYase) Length = 813 Score = 29.6 bits (65), Expect = 1.8 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 16/74 (21%) Frame = -2 Query: 370 TCSLRCRPVIPPTERALSSMVLPLV----------------EAMPFVSRTARVTVSPSAG 239 T R R +I T+R ++ ++ LV E PF+++TAR S + Sbjct: 58 TSDPRARAIIAKTDRKVAEILTDLVSGSSRQTVLISADLRKEQSPFITKTARAIESMACA 117 Query: 238 LRSEGSGWLKMPQV 197 + GS + K P++ Sbjct: 118 WATPGSSYHKDPEI 131
>VE2_HPV2A (P25482) Regulatory protein E2| Length = 391 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/30 (46%), Positives = 15/30 (50%) Frame = +1 Query: 118 AQPAASDSTGSTAPPTPSKCSRMLPPSPGA 207 A A S G APPT + CS P SP A Sbjct: 230 AASAESTGAGRAAPPTQALCSAQAPTSPPA 259
>HM23_CAEEL (P34663) Homeobox protein ceh-23| Length = 305 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/35 (34%), Positives = 23/35 (65%) Frame = -2 Query: 346 VIPPTERALSSMVLPLVEAMPFVSRTARVTVSPSA 242 + PP++ A +S++LP + A PF+ + + +PSA Sbjct: 64 LFPPSQPA-NSLILPTIPAQPFIPNPSLLQANPSA 97
>ACHA4_PANTR (Q5IS77) Neuronal acetylcholine receptor protein, alpha-4 subunit| precursor Length = 627 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = +1 Query: 121 QPAASDSTGSTAPPTPSKCSRM-LPPSPGASSTSRTPQ 231 +P A+ T S PP+PS C + +P PG S S + Q Sbjct: 391 EPPATSGTQSLHPPSPSFCIPLDVPAEPGPSCKSPSDQ 428
>ACHA4_HUMAN (P43681) Neuronal acetylcholine receptor protein, alpha-4 subunit| precursor Length = 627 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = +1 Query: 121 QPAASDSTGSTAPPTPSKCSRM-LPPSPGASSTSRTPQ 231 +P A+ T S PP+PS C + +P PG S S + Q Sbjct: 391 EPPATSGTQSLHPPSPSFCVPLDVPAEPGPSCKSPSDQ 428
>CUT_DROME (P10180) Homeobox protein cut| Length = 2175 Score = 28.9 bits (63), Expect = 3.1 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +1 Query: 124 PAASDSTGSTAPPTPSKCSRMLPPSPGASSTSRTP 228 P + TG+ APPT + PP+ GASS S P Sbjct: 1240 PPSGPGTGAGAPPTAA------PPTGGASSNSAAP 1268
>NIR_NEUCR (P38681) Nitrite reductase [NAD(P)H] (EC 1.7.1.4)| Length = 1176 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 2/68 (2%) Frame = -2 Query: 379 TPSTCSLRCRPVIPPTERALSSMVLPLVEAMPFVSRTARVTVSPSAGLRSEG--SGWLKM 206 +PS+CS P PP+ SS + P S T T S S G S W+ Sbjct: 999 SPSSCSSSALPPSPPSTPPRSSSPVTSPPQSPTSSATPATTASSSCTTNPSGPASPWISC 1058 Query: 205 PQVKEEAS 182 P K S Sbjct: 1059 PFHKRNFS 1066
>VE2_HPV27 (P36789) Regulatory protein E2| Length = 388 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/27 (59%), Positives = 17/27 (62%) Frame = +1 Query: 127 AASDSTGSTAPPTPSKCSRMLPPSPGA 207 AAS TG TAPPT C+ PPSP A Sbjct: 231 AASARTG-TAPPTNLLCTAPAPPSPPA 256
>AQP1_BOVIN (P47865) Aquaporin-1 (AQP-1) (Aquaporin-CHIP) (Water channel| protein for red blood cells and kidney proximal tubule) (Water channel protein CHIP29) Length = 270 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +3 Query: 240 PADGDTVTLAVRDTNGIASTSGSTIELSARSVGGITGRHLKEQV 371 P + T AV+D ++ G +I A+SVG I+G HL V Sbjct: 37 PIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAV 80
>PROB_XANC5 (Q3BSJ0) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)| (GK) Length = 384 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = +3 Query: 249 GDTVTLAVRDTNGIASTSGSTIELSARSVGGITGRHLKEQVDGVL 383 GD V + +RDT G + + SA + I GRH +E ++ VL Sbjct: 324 GDMVEIRLRDTAGDQCLARGVSQYSALDIRRIAGRHSRE-IENVL 367
>AQP1_SHEEP (P56401) Aquaporin-1 (AQP-1) (Aquaporin-CHIP) (Water channel| protein for red blood cells and kidney proximal tubule) Length = 271 Score = 28.5 bits (62), Expect = 4.1 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +3 Query: 240 PADGDTVTLAVRDTNGIASTSGSTIELSARSVGGITGRHLKEQV 371 P + T AV+D ++ G +I A+SVG I+G HL V Sbjct: 37 PIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAV 80
>AKAP2_HUMAN (Q9Y2D5) A-kinase anchor protein 2 (Protein kinase A-anchoring| protein 2) (PRKA2) (AKAP-2) Length = 1103 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/25 (52%), Positives = 13/25 (52%) Frame = +1 Query: 148 STAPPTPSKCSRMLPPSPGASSTSR 222 S P P CSR PSPG TSR Sbjct: 139 SQLPDLPILCSRTAEPSPGQDGTSR 163
>NFSA_SALTY (Q9Z5Z2) Oxygen-insensitive NADPH nitroreductase (EC 1.-.-.-)| Length = 240 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = -2 Query: 382 STPSTCSLRCRPVIPPTERALSSMVLPLVEAMPFVSRTARVTV 254 ST S+ L+C +I T+RAL ++PL V++ A V Sbjct: 36 STSSSSFLQCSSIIRITDRALREALVPLTGGQKHVAQAAEFWV 78
>YQ12_CAEEL (Q09449) Hypothetical ATP-dependent helicase C05C10.2 in chromosome| II (EC 3.6.1.-) Length = 1551 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = -2 Query: 262 VTVSPSAGLRSEGSGWLKMPQVKEEASESTCLA*AAPYSLSNRWPPAVLDASFV 101 V V+ A GS K+P +S++TC A+ +L +R PPA + SF+ Sbjct: 637 VAVTELARCNGHGSDAFKIPFDVSMSSQNTCTWMASKITLPSRPPPASVLFSFM 690
>OAF_DROME (Q9NLA6) Out at first protein [Contains: Out at first short| protein] Length = 487 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = +1 Query: 124 PAASDSTGSTAPPTPSKCSRMLPPSPGASSTS 219 P + + S+ PPTPS S PPS +SS+S Sbjct: 450 PTSHHQSSSSTPPTPSTSSS--PPSSSSSSSS 479
>PCQAP_HUMAN (Q96RN5) Positive cofactor 2 glutamine/Q-rich-associated protein| (PC2 glutamine/Q-rich-associated protein) (TPA-inducible gene 1 protein) (TIG-1) (Activator-recruited cofactor 105 kDa component) (ARC105) (CTG repeat protein 7a) Length = 788 Score = 28.1 bits (61), Expect = 5.4 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 3/40 (7%) Frame = +1 Query: 121 QPAASDSTGSTAPPTPSKCSRMLPPSPGASS---TSRTPQ 231 QP++ ++ ++ P PS S + PSP S T+RTPQ Sbjct: 460 QPSSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQ 499
>BBC1_YEAST (P47068) Myosin tail region-interacting protein MTI1 (BBC1 protein)| Length = 1157 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = -2 Query: 376 PSTCSLRCRPVIPPTERALSSMVLPLVEAMPFVSRTARVTVSPS 245 PS S+ P +PP ALS+ +P V +P VS +PS Sbjct: 704 PSAPSVPSAPPVPPAPPALSAPSVPPVPPVPPVSSAPPALSAPS 747
>MKL2_MOUSE (P59759) MKL/myocardin-like protein 2 (Myocardin-related| transcription factor B) (MRTF-B) Length = 1080 Score = 28.1 bits (61), Expect = 5.4 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 3/39 (7%) Frame = +1 Query: 121 QPAASDSTGSTAPPTPSKCSRMLPP---SPGASSTSRTP 228 QPA+ +S GS A P+ K S PP S A TS +P Sbjct: 188 QPASQESQGSAASPSEPKVSASPPPVTASTPAQFTSVSP 226
>BAG3_HUMAN (O95817) BAG family molecular chaperone regulator 3 (BCL-2-binding| athanogene-3) (BAG-3) (Bcl-2-binding protein Bis) (Docking protein CAIR-1) Length = 575 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = +1 Query: 124 PAASDSTGSTAPPTPSKCSRMLPPSPGASSTSRTPQ 231 P S+ PP P C PPSPG S+ +P+ Sbjct: 356 PPPSEKVEVKVPPAPVPCP---PPSPGPSAVPSSPK 388
>MASS1_MOUSE (Q8VHN7) Monogenic audiogenic seizure susceptibility protein 1| precursor (Very large G-protein coupled receptor 1) (Neurepin) Length = 6298 Score = 27.7 bits (60), Expect = 7.0 Identities = 18/67 (26%), Positives = 28/67 (41%) Frame = +3 Query: 126 GGQRFDREYGAAYAKQVLSDASSFTWGIFNQPDPSDRRPADGDTVTLAVRDTNGIASTSG 305 GG R D+ YG A + S WG+ + RP D + + + N +T Sbjct: 5597 GGARIDKVYGTANITLISDADSQAVWGL----EDLLHRPLHEDILNRVLHNLNLRVATES 5652 Query: 306 STIELSA 326 + +LSA Sbjct: 5653 TDEQLSA 5659
>SN1L2_HUMAN (Q9H0K1) Serine/threonine-protein kinase SNF1-like kinase 2 (EC| 2.7.11.1) (Qin-induced kinase) Length = 926 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/36 (36%), Positives = 16/36 (44%) Frame = +1 Query: 121 QPAASDSTGSTAPPTPSKCSRMLPPSPGASSTSRTP 228 QP S S APP P++ + PP P R P Sbjct: 800 QPLPSTSGPRAAPPLPTQLQQQQPPPPPPPPPPRQP 835
>RADA_MYCTU (P65953) DNA repair protein radA homolog (DNA repair protein sms| homolog) Length = 480 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%) Frame = +2 Query: 116 EHSRRPAIR--QGVRRRLRQASALGCFLLH 199 E R A+R +GV+ R A +GCFLLH Sbjct: 240 EGDRNGALRMVRGVKNRFGAADEVGCFLLH 269
>RADA_MYCBO (P65954) DNA repair protein radA homolog (DNA repair protein sms| homolog) Length = 480 Score = 27.7 bits (60), Expect = 7.0 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%) Frame = +2 Query: 116 EHSRRPAIR--QGVRRRLRQASALGCFLLH 199 E R A+R +GV+ R A +GCFLLH Sbjct: 240 EGDRNGALRMVRGVKNRFGAADEVGCFLLH 269
>PCQAP_MOUSE (Q924H2) Positive cofactor 2 glutamine/Q-rich-associated protein| (PC2 glutamine/Q-rich-associated protein) (mPcqap) Length = 792 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%) Frame = +1 Query: 121 QPAASDSTGSTAPPTPSKCSRMLPPSPGASS---TSRTPQ 231 QP + ++ ++ P PS S + PSP S T+RTPQ Sbjct: 461 QPGSQPNSNVSSGPAPSPSSFLPSPSPQPSQSPVTARTPQ 500
>MASS1_HUMAN (Q8WXG9) Monogenic audiogenic seizure susceptibility protein 1| homolog precursor (Very large G-protein coupled receptor 1) (Usher syndrome type-2C protein) (G-protein coupled receptor 98) Length = 6307 Score = 27.7 bits (60), Expect = 7.0 Identities = 18/67 (26%), Positives = 29/67 (43%) Frame = +3 Query: 126 GGQRFDREYGAAYAKQVLSDASSFTWGIFNQPDPSDRRPADGDTVTLAVRDTNGIASTSG 305 GG R D+ YG A V S WG+ +Q +P + D + + + +T Sbjct: 5605 GGARIDKVYGTANITLVSDADSQAIWGLADQL----HQPVNDDILNRVLHTISMKVATEN 5660 Query: 306 STIELSA 326 + +LSA Sbjct: 5661 TDEQLSA 5667
>BBS10_HUMAN (Q8TAM1) Bardet-Biedl syndrome 10 protein| Length = 723 Score = 27.7 bits (60), Expect = 7.0 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = +3 Query: 204 GIFNQPDPSDRRPADGDTVTLAVRDT-NGIASTSGSTIELSARS 332 G+ Q D S RPADGD + V +T + STSGS L++ + Sbjct: 238 GLVLQKDFSVYRPADGDMRMVIVTETIQPLFSTSGSEFILNSEA 281
>IRF7_HUMAN (Q92985) Interferon regulatory factor 7 (IRF-7)| Length = 503 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/36 (36%), Positives = 19/36 (52%) Frame = +1 Query: 121 QPAASDSTGSTAPPTPSKCSRMLPPSPGASSTSRTP 228 QPAA + + AP +P + L PSP A + + P Sbjct: 249 QPAALTTGEAAAPESPHQAEPYLSPSPSACTAVQEP 284
>IASPP_HUMAN (Q8WUF5) RelA-associated inhibitor (Inhibitor of ASPP protein)| (Protein iASPP) (PPP1R13B-like protein) (NFkB-interacting protein 1) Length = 828 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/36 (33%), Positives = 16/36 (44%) Frame = +1 Query: 124 PAASDSTGSTAPPTPSKCSRMLPPSPGASSTSRTPQ 231 P S PP P+ + + PP+P SS PQ Sbjct: 568 PITEGSEARAGPPAPAPPAPIPPPAPSQSSPPEQPQ 603
>GSA_NEIG1 (Q5FAH9) Glutamate-1-semialdehyde 2,1-aminomutase (EC 5.4.3.8)| (GSA) (Glutamate-1-semialdehyde aminotransferase) (GSA-AT) Length = 426 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/36 (41%), Positives = 19/36 (52%) Frame = +3 Query: 264 LAVRDTNGIASTSGSTIELSARSVGGITGRHLKEQV 371 L R NGIA+ IE +A SVGG+ G + V Sbjct: 327 LTQRLANGIAAAKAHGIEFAADSVGGMFGLYFAAHV 362
>SP3_MOUSE (O70494) Transcription factor Sp3| Length = 783 Score = 25.0 bits (53), Expect(2) = 8.5 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +1 Query: 118 AQPAASDSTGSTAPPTPSKCSRMLPPSPG 204 A AA D+ S + CS++ PPSPG Sbjct: 46 AAAAAQDTQPSPLALLAATCSKIGPPSPG 74 Score = 20.8 bits (42), Expect(2) = 8.5 Identities = 10/38 (26%), Positives = 17/38 (44%) Frame = +3 Query: 240 PADGDTVTLAVRDTNGIASTSGSTIELSARSVGGITGR 353 P D D A+ +G+T +L++ +GG R Sbjct: 73 PGDDDEEAAVAAAAGVPAAAAGATGDLASAQLGGAPNR 110
>MUC2_RAT (Q62635) Mucin-2 precursor (Intestinal mucin 2) (Fragment)| Length = 1513 Score = 27.3 bits (59), Expect = 9.1 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = +1 Query: 124 PAASDSTGSTAP-PTPSKCSRMLPPSPGASSTSRT 225 P S +T +T+P P+P+ + PSP S+TS T Sbjct: 1465 PTPSPTTSTTSPTPSPTTSTTSPTPSPTTSTTSPT 1499
>HPAI_SALDU (Q9RPV0) 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase (EC| 4.1.2.-) (HHED aldolase) Length = 263 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 6/56 (10%) Frame = -2 Query: 316 SMVLPLVEAMPFVSRTARVTVSPSAGLRSEGSG------WLKMPQVKEEASESTCL 167 ++++P+V+ T P AG+R GS W ++P +A+++ C+ Sbjct: 89 TLLIPMVQNADEARNAVAATRYPPAGIRGVGSALARASRWNRIPDYFHQANDAMCV 144
>INLA_LISMF (Q723K6) Internalin A precursor| Length = 800 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 3/37 (8%) Frame = +1 Query: 124 PAASDSTGSTAPPTPSKCSRMLPPS---PGASSTSRT 225 P A +TG PPT + PPS PG S+TS T Sbjct: 707 PVAPPTTGGNTPPTTNNGGNTTPPSANIPG-SNTSNT 742
>T7L1D_XENLA (P70064) Transcription factor 7-like 1-D (HMG box transcription| factor 3-D) (TCF-3-D) (xTcf-3d) Length = 550 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +1 Query: 124 PAASDSTGSTAPPTPSKCSRMLPPSPGA 207 P TG PP PS+ S P SPGA Sbjct: 190 PEIDPKTGIPRPPHPSELSPYYPLSPGA 217
>T7L1C_XENLA (P70063) Transcription factor 7-like 1-C (HMG box transcription| factor 3-C) (TCF-3-C) (xTcf-3c) Length = 550 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +1 Query: 124 PAASDSTGSTAPPTPSKCSRMLPPSPGA 207 P TG PP PS+ S P SPGA Sbjct: 190 PEIDPKTGIPRPPHPSELSPYYPLSPGA 217
>SMA4_CAEEL (P45897) Dwarfin sma-4 (MAD protein homolog 3)| Length = 570 Score = 27.3 bits (59), Expect = 9.1 Identities = 12/32 (37%), Positives = 16/32 (50%) Frame = +1 Query: 124 PAASDSTGSTAPPTPSKCSRMLPPSPGASSTS 219 P S S PPTP+ +PP+ GA T+ Sbjct: 112 PCTSSQASSQPPPTPTVNPTPIPPNAGAVLTT 143
>T7L1B_XENLA (Q90ZB6) Transcription factor 7-like 1-B (HMG box transcription| factor 3-B) (TCF-3-B) (xTcf-3) Length = 551 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +1 Query: 124 PAASDSTGSTAPPTPSKCSRMLPPSPGA 207 P TG PP PS+ S P SPGA Sbjct: 191 PEIDPKTGIPRPPHPSELSPYYPLSPGA 218
>TF7L1_MOUSE (Q9Z1J1) Transcription factor 7-like 1 (HMG box transcription| factor 3) (TCF-3) (mTCF-3) Length = 584 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +1 Query: 124 PAASDSTGSTAPPTPSKCSRMLPPSPGA 207 P TG PP PS+ S P SPGA Sbjct: 210 PEIDPKTGIPRPPHPSELSPYYPLSPGA 237
>TF7L1_HUMAN (Q9HCS4) Transcription factor 7-like 1 (HMG box transcription| factor 3) (TCF-3) Length = 588 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +1 Query: 124 PAASDSTGSTAPPTPSKCSRMLPPSPGA 207 P TG PP PS+ S P SPGA Sbjct: 213 PEIDPKTGIPRPPHPSELSPYYPLSPGA 240
>TF7L1_XENTR (Q6GL68) Transcription factor 7-like 1 (HMG box transcription| factor 3) (TCF-3) Length = 553 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +1 Query: 124 PAASDSTGSTAPPTPSKCSRMLPPSPGA 207 P TG PP PS+ S P SPGA Sbjct: 191 PEIDPKTGIPRPPHPSELSPYYPLSPGA 218
>T7L1A_XENLA (P70062) Transcription factor 7-like 1-A (HMG box transcription| factor 3-A) (TCF-3-A) (xTcf-3) Length = 554 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/28 (46%), Positives = 14/28 (50%) Frame = +1 Query: 124 PAASDSTGSTAPPTPSKCSRMLPPSPGA 207 P TG PP PS+ S P SPGA Sbjct: 191 PEIDPKTGIPRPPHPSELSPYYPLSPGA 218
>PSN_CAEEL (P52166) Presenilin sel-12| Length = 444 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = +1 Query: 121 QPAASDSTGSTAPPTPSKCSRMLPPSPGASSTSRTPQ 231 +P +SDS STA P + CS P P R PQ Sbjct: 279 EPTSSDSNTSTAFPGEASCSSETPKRP---KVKRIPQ 312
>MYBPH_MOUSE (P70402) Myosin-binding protein H (MyBP-H) (H-protein)| Length = 483 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +1 Query: 127 AASDSTGSTAPPTPSKCSRMLPPSPGASS 213 AAS+STG P P K P +P AS+ Sbjct: 34 AASESTGQEQAPEPQKPQAQDPAAPAASA 62
>BASP_MOUSE (Q91XV3) Brain acid soluble protein 1 (BASP1 protein) (Neuronal| axonal membrane protein NAP-22) (22 kDa neuronal tissue-enriched acidic protein) Length = 225 Score = 27.3 bits (59), Expect = 9.1 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Frame = +1 Query: 118 AQPAASDSTGSTAPPTPSKCSRMLP-PSPGASSTSRTP 228 A PAASDS S+A P PS S+ P S SS ++ P Sbjct: 161 AAPAASDSKPSSAEPAPS--SKETPAASEAPSSAAKAP 196 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.127 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,408,450 Number of Sequences: 219361 Number of extensions: 643419 Number of successful extensions: 3773 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 3390 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3753 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
