ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet102f06 |
|---|---|
| Clone Library Name | barley_pub |
>CWPX_ARATH (P47925) Putative cell wall protein precursor| Length = 140 Score = 47.4 bits (111), Expect = 2e-05 Identities = 36/95 (37%), Positives = 43/95 (45%), Gaps = 19/95 (20%) Frame = +3 Query: 192 RHLPAEKPAEDVVKRPDTF----QEGTVLISGIGRYELGTH-------YIPDIGG--LDH 332 RH+P DV K PD + T+LI G+GR+ L Y P G Sbjct: 29 RHVPKSPKTTDV-KHPDFLVTIEPKPTILIPGVGRFLLPPKCKKPFYPYNPVTGAPLTGG 87 Query: 333 SIPAAANGQF------IPGADDTWVPNPGFEVPNP 419 IP+ GQ +PG DDT VPNPGFE P P Sbjct: 88 GIPSYNGGQGAGPHTQLPGGDDTLVPNPGFEAPTP 122
>SAS_DROME (Q04164) Putative epidermal cell surface receptor precursor (Stranded| at second protein) Length = 1693 Score = 33.5 bits (75), Expect = 0.30 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 8/53 (15%) Frame = +2 Query: 293 GHPLHPGHRRARPQHPGRRQRAVHPRG--------RRHLGAQPRLRGAQPFPP 427 GHP+HPGH HPG+ Q+ H G +HL Q + G P PP Sbjct: 1107 GHPVHPGHGGPPRIHPGQTQKDNHNLGPQVRIEQILQHL--QQTVPGGPPPPP 1157
>RPB1_MOUSE (P08775) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RPB1) Length = 1970 Score = 32.0 bits (71), Expect = 0.87 Identities = 22/80 (27%), Positives = 30/80 (37%) Frame = +3 Query: 204 AEKPAEDVVKRPDTFQEGTVLISGIGRYELGTHYIPDIGGLDHSIPAAANGQFIPGADDT 383 A P + + +G G +G+ P G S + A+G F PG Sbjct: 1506 APSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASG-FSPGYSPA 1564 Query: 384 WVPNPGFEVPNPFRPGSDSP 443 W P PG +P PG SP Sbjct: 1565 WSPTPG----SPGSPGPSSP 1580
>RPB1_HUMAN (P24928) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| (RPB1) Length = 1970 Score = 32.0 bits (71), Expect = 0.87 Identities = 22/80 (27%), Positives = 30/80 (37%) Frame = +3 Query: 204 AEKPAEDVVKRPDTFQEGTVLISGIGRYELGTHYIPDIGGLDHSIPAAANGQFIPGADDT 383 A P + + +G G +G+ P G S + A+G F PG Sbjct: 1506 APSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASG-FSPGYSPA 1564 Query: 384 WVPNPGFEVPNPFRPGSDSP 443 W P PG +P PG SP Sbjct: 1565 WSPTPG----SPGSPGPSSP 1580
>Y3466_MYCTU (O06331) Hypothetical protein Rv3466/MT3572| Length = 222 Score = 31.6 bits (70), Expect = 1.1 Identities = 33/90 (36%), Positives = 37/90 (41%), Gaps = 20/90 (22%) Frame = +2 Query: 257 DGADLGDREVRTGHPLHP----------------GH---RRARPQHPGRRQRAVHPRGRR 379 D ADLG R TG PL P H RA + P RR VHP GRR Sbjct: 95 DAADLGPRRALTGEPLAPQLTATATAQRQGLIGEAHVKVIRALFRPPARRGGCVHPPGRR 154 Query: 380 -HLGAQPRLRGAQPFPPRLRLSLMG*ARPR 466 G Q R ++ P LR + G A PR Sbjct: 155 SRPGRQSRSISSRRAGP-LRPAGHGLATPR 183
>Y1614_MYCBO (P0A5F2) Hypothetical protein Mb1614c| Length = 222 Score = 31.6 bits (70), Expect = 1.1 Identities = 33/90 (36%), Positives = 37/90 (41%), Gaps = 20/90 (22%) Frame = +2 Query: 257 DGADLGDREVRTGHPLHP----------------GH---RRARPQHPGRRQRAVHPRGRR 379 D ADLG R TG PL P H RA + P RR VHP GRR Sbjct: 95 DAADLGPRRALTGEPLAPQLTATATAQRQGLIGEAHIKVIRALFRPPARRGGCVHPPGRR 154 Query: 380 -HLGAQPRLRGAQPFPPRLRLSLMG*ARPR 466 G Q R ++ P LR + G A PR Sbjct: 155 SRPGRQSRSISSRRAGP-LRPAGHGLATPR 183
>Y1588_MYCTU (P0A5F1) Hypothetical protein Rv1588c/MT1623| Length = 222 Score = 31.6 bits (70), Expect = 1.1 Identities = 33/90 (36%), Positives = 37/90 (41%), Gaps = 20/90 (22%) Frame = +2 Query: 257 DGADLGDREVRTGHPLHP----------------GH---RRARPQHPGRRQRAVHPRGRR 379 D ADLG R TG PL P H RA + P RR VHP GRR Sbjct: 95 DAADLGPRRALTGEPLAPQLTATATAQRQGLIGEAHIKVIRALFRPPARRGGCVHPPGRR 154 Query: 380 -HLGAQPRLRGAQPFPPRLRLSLMG*ARPR 466 G Q R ++ P LR + G A PR Sbjct: 155 SRPGRQSRSISSRRAGP-LRPAGHGLATPR 183
>GIPC1_HUMAN (O14908) GIPC PDZ domain-containing protein 1 (RGS19-interacting| protein 1) (GAIP C-terminus-interacting protein) (RGS-GAIP-interacting protein) (Tax interaction protein 2) (TIP-2) Length = 333 Score = 30.8 bits (68), Expect = 1.9 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%) Frame = -2 Query: 439 ESEPGRKGLGTSKPG-LGTQVSSAPGMNCP 353 E+EPGR GLG +PG LG S P M P Sbjct: 19 EAEPGRGGLGVGEPGPLGGGGSGGPQMGLP 48
>GUN16_TRIHA (Q8J0I9) Endo-1,6-beta-D-glucanase BGN16.3 precursor (EC 3.2.1.75)| (Beta-1,6-glucanase BGN16.3) (Glucan endo-1,6-beta-glucosidase BGN16.3) Length = 490 Score = 30.8 bits (68), Expect = 1.9 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = -2 Query: 466 AWTCSTHQGESEPGRKG--LGTSKPGLGTQVSSAPGMNCPLAAAGMLWSSP 320 A+T + G ++PG G LG + T ++ G+N L G WS+P Sbjct: 133 AYTYDDNGGNADPGMTGFNLGDRGTAMATMLAQMKGLNSNLQIFGSPWSAP 183
>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and| gyrB (ORF 3) Length = 437 Score = 30.4 bits (67), Expect = 2.5 Identities = 24/59 (40%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = +2 Query: 293 GHPLHPGHRRARPQHPGRRQRAVHPRGRRHLGAQPRLR-GAQPFPPRLRLSLMG*ARPR 466 G H G RRA RQ+ HPRGR A R++ GA P RLR RPR Sbjct: 115 GRNRHAGDRRAPGVDSRLRQQHQHPRGRH---ASDRVQDGAHPRRQRLREQPRHAGRPR 170
>PYGO_DROME (Q9V9W8) Protein pygopus (Protein gammy legs)| Length = 815 Score = 30.4 bits (67), Expect = 2.5 Identities = 20/54 (37%), Positives = 22/54 (40%), Gaps = 3/54 (5%) Frame = +2 Query: 275 DREVRTGHPLHPGHRRAR--PQHPGRRQRAVHPRGRR-HLGAQPRLRGAQPFPP 427 DR G P P H P HPG HP G H+G P +RG P P Sbjct: 144 DRMGMGGGPPPPPHMHPHMHPHHPGGPMG--HPHGPHPHMGGPPPMRGMSPMHP 195
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 30.4 bits (67), Expect = 2.5 Identities = 19/48 (39%), Positives = 21/48 (43%), Gaps = 4/48 (8%) Frame = +2 Query: 305 HPGHRRARPQHPGRRQRAVHPRGRRHLGAQP----RLRGAQPFPPRLR 436 H R A P P +RQ+ PRGRR P R R P PP R Sbjct: 523 HSPSRSASPS-PRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRR 569
>ADP1_MYCGA (Q49379) Adhesin P1 precursor (Cytadhesin P1) (Attachment protein)| Length = 1122 Score = 30.0 bits (66), Expect = 3.3 Identities = 16/54 (29%), Positives = 24/54 (44%) Frame = +3 Query: 240 DTFQEGTVLISGIGRYELGTHYIPDIGGLDHSIPAAANGQFIPGADDTWVPNPG 401 D + G L + ++G H++P + S P ANG G+ TW N G Sbjct: 461 DATRNGLALAAPALGQDVGYHFVPRLAVGGVSSPRGANGNIFLGSAITWGTNGG 514
>PHAAB_RHIME (Q52978) Probable K(+)/H(+) antiporter subunit A/B (pH adaptation| potassium efflux system protein A/B) (Pha system subunit A/B) Length = 999 Score = 29.6 bits (65), Expect = 4.3 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = +3 Query: 243 TFQEGTVLISGIGRYELGTHYIPDIGGLDHSIPAAANGQFIPGADDTWVP 392 TF+ + +GI +E GT I +GGL H +P A + A VP Sbjct: 363 TFKASLFMAAGIIDHESGTRDIRRLGGLFHFMPITATLAMVASAAMAGVP 412
>ADP2_MYCGA (Q9REM8) Adhesin P1 precursor (Cytadhesin P1) (Attachment protein)| (Adherence protein A) Length = 1122 Score = 29.6 bits (65), Expect = 4.3 Identities = 16/54 (29%), Positives = 23/54 (42%) Frame = +3 Query: 240 DTFQEGTVLISGIGRYELGTHYIPDIGGLDHSIPAAANGQFIPGADDTWVPNPG 401 D + G L ++G H++P + S P ANG G+ TW N G Sbjct: 461 DATRNGLALAPASLGQDVGYHFVPRLAVGGVSSPRGANGNIFLGSAITWGTNGG 514
>ERP_MYCTU (P0A5P4) Exported repetitive protein precursor (Cell surface| protein pirG) (EXP53) Length = 284 Score = 29.6 bits (65), Expect = 4.3 Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Frame = -2 Query: 451 THQGESEPGRKGLGTSKPGLGTQVSSAPGMNCP-LAAAGMLWSSPPMSGM*WVPSSYL-P 278 T G++ G G G + PGL + ++PG+ P L + G+ +P + G P + L P Sbjct: 80 TGSGDASTGLTGPGLTSPGLTSPGLTSPGLTDPALTSPGL---TPTLPGSLAAPGTTLAP 136 Query: 277 IPEISTVPSWNVSGRFTTSSAGFSAG 200 P + P+ ++ TS G + G Sbjct: 137 TPGVGANPA--LTNPALTSPTGATPG 160
>ERP_MYCBO (P0A5P5) Exported repetitive protein precursor (Cell surface| protein pirG) (EXP53) Length = 284 Score = 29.6 bits (65), Expect = 4.3 Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 2/86 (2%) Frame = -2 Query: 451 THQGESEPGRKGLGTSKPGLGTQVSSAPGMNCP-LAAAGMLWSSPPMSGM*WVPSSYL-P 278 T G++ G G G + PGL + ++PG+ P L + G+ +P + G P + L P Sbjct: 80 TGSGDASTGLTGPGLTSPGLTSPGLTSPGLTDPALTSPGL---TPTLPGSLAAPGTTLAP 136 Query: 277 IPEISTVPSWNVSGRFTTSSAGFSAG 200 P + P+ ++ TS G + G Sbjct: 137 TPGVGANPA--LTNPALTSPTGATPG 160
>SLDA1_GLUOX (Q70JN9) Glycerol dehydrogenase large subunit precursor (EC| 1.1.99.22) (Gluconate/polyol dehydrogenase large subunit) (D-sorbitol dehydrogenase subunit sldA) (SLDH) (D-arabitol dehydrogenase large subunit) (ARDH) Length = 743 Score = 29.6 bits (65), Expect = 4.3 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%) Frame = +3 Query: 339 PAAANGQFIP----GADDTWVPNPGFEVPNPFRPGSDSP 443 P AAN QF P G+ + VP PG N F P ++P Sbjct: 19 PLAANAQFAPAGSGGSPTSSVPGPGNGSGNSFEPTENTP 57
>JHD2A_MOUSE (Q6PCM1) JmjC domain-containing histone demethylation protein 2A| (EC 1.14.11.-) (Jumonji domain-containing protein 1A) Length = 1323 Score = 29.6 bits (65), Expect = 4.3 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 8/81 (9%) Frame = -2 Query: 457 CSTHQGE--SEPGRK------GLGTSKPGLGTQVSSAPGMNCPLAAAGMLWSSPPMSGM* 302 CS Q + S+P K L KP LGT V + + P+A G S P S Sbjct: 753 CSNRQFKLFSKPALKEDLKQTSLSGEKPTLGTMVQQSSPVLEPVAVCGEAASKPASSVKP 812 Query: 301 WVPSSYLPIPEISTVPSWNVS 239 P+S P+ ++ + S NV+ Sbjct: 813 TCPTSTSPLNWLADLTSGNVN 833
>RPB1_CRIGR (P11414) DNA-directed RNA polymerase II largest subunit (EC| 2.7.7.6) (RPB1) (Fragment) Length = 467 Score = 29.3 bits (64), Expect = 5.6 Identities = 17/45 (37%), Positives = 20/45 (44%) Frame = +3 Query: 309 PDIGGLDHSIPAAANGQFIPGADDTWVPNPGFEVPNPFRPGSDSP 443 P G S + A+G F PG W P PG +P PG SP Sbjct: 38 PGAAGFSPSAASDASG-FSPGYSPAWSPTPG----SPGSPGPSSP 77
>POLG_HCVJF (Q99IB8) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3032 Score = 29.3 bits (64), Expect = 5.6 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = -3 Query: 465 RGRAQPIRESRSRGGKGWAPRSRGW 391 RGR QPI + R GK W R W Sbjct: 58 RGRRQPIPKDRRSTGKAWGKPGRPW 82
>YT44_STRFR (P20188) Hypothetical 44.4 kDa protein in transposon Tn4556| Length = 395 Score = 29.3 bits (64), Expect = 5.6 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = +2 Query: 302 LHPGHRRARPQHPGRRQRAVH-PRGRRHLGAQPRLRGA 412 L PG + R QH + QR VH PR H G Q R + A Sbjct: 162 LRPGQQLRRDQHLQQVQRVVHRPRREVHGGGQQRRQAA 199
>KI13A_MOUSE (Q9EQW7) Kinesin-like protein KIF13A| Length = 1749 Score = 29.3 bits (64), Expect = 5.6 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = +3 Query: 336 IPAAANGQFIPGADDTWVPNPGFEVPNP 419 +PA +G IPGA WVP PG E P Sbjct: 1136 VPAPGSG--IPGAPADWVPPPGMETHIP 1161
>AMER1_HUMAN (Q9Y4X0) AMME syndrome candidate gene 1 protein| Length = 333 Score = 28.9 bits (63), Expect = 7.3 Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 13/100 (13%) Frame = -2 Query: 472 GVAWTCSTHQGES-----EPGRKGLGTSKPGLGTQVSSAPGMNCPLA--------AAGML 332 G A + S GES E G G GT GLG G C L+ G+ Sbjct: 25 GGASSSSHCSGESQCRAGELGLGGAGTRLNGLGGLTGGGSGSGCTLSPPQGCGGGGGGIA 84 Query: 331 WSSPPMSGM*WVPSSYLPIPEISTVPSWNVSGRFTTSSAG 212 S PP G+ + L P +T S + S ++SS G Sbjct: 85 LSPPPSCGV----GTLLSTPAAATSSSPSSSSAASSSSPG 120
>UXUA_BACFR (Q650A0) Mannonate dehydratase (EC 4.2.1.8) (D-mannonate hydrolase)| Length = 396 Score = 28.9 bits (63), Expect = 7.3 Identities = 14/48 (29%), Positives = 26/48 (54%) Frame = -1 Query: 251 LERVRSLHHVLRGFLCRQMARRRALPGEARRGHQRREDQQGRRLAGHA 108 LE ++HV++ FL Q R+ ++P GHQ +D + + G++ Sbjct: 326 LEGDVDMYHVMKAFLELQQRRKVSIPMRPDHGHQMVDDLKKKTNPGYS 373
>UXUA_BACFN (Q5LIV6) Mannonate dehydratase (EC 4.2.1.8) (D-mannonate hydrolase)| Length = 396 Score = 28.9 bits (63), Expect = 7.3 Identities = 14/48 (29%), Positives = 26/48 (54%) Frame = -1 Query: 251 LERVRSLHHVLRGFLCRQMARRRALPGEARRGHQRREDQQGRRLAGHA 108 LE ++HV++ FL Q R+ ++P GHQ +D + + G++ Sbjct: 326 LEGDVDMYHVMKAFLELQQRRKVSIPMRPDHGHQMVDDLKKKTNPGYS 373
>KI13A_HUMAN (Q9H1H9) Kinesin-like protein KIF13A (Kinesin-like protein RBKIN)| Length = 1805 Score = 28.9 bits (63), Expect = 7.3 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 336 IPAAANGQFIPGADDTWVPNPGFEVPNP 419 +PA +G IPGA W+P PG E P Sbjct: 1149 VPAPGSG--IPGAPADWIPPPGMETHIP 1174
>PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing protein| phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat protein phosphatase) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory Length = 1717 Score = 28.9 bits (63), Expect = 7.3 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = -1 Query: 350 GGGRDAVVEPADVRDVVGAQFVPPDPRDQHRP 255 G G A EPA+ G + PP+PRD P Sbjct: 251 GPGAAAAREPAEPPPEAGPRLAPPEPRDSEVP 282
>SHAN1_RAT (Q9WV48) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (GKAP/SAPAP-interacting protein) (SPANK-1) (Synamon) (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2167 Score = 28.5 bits (62), Expect = 9.6 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%) Frame = +2 Query: 299 PLHPGHRRARPQHPGRRQRAVHPRG---RRHLGAQPRLRG 409 P P H A P HP + P R LG QP LRG Sbjct: 1018 PPQPHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRG 1057
>IF2_BACHD (Q9KA77) Translation initiation factor IF-2| Length = 730 Score = 28.5 bits (62), Expect = 9.6 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 6/45 (13%) Frame = +2 Query: 326 RPQHPGRRQRAVHP------RGRRHLGAQPRLRGAQPFPPRLRLS 442 +P+H G + + H R +R G QP + A+P P ++ S Sbjct: 110 KPKHKGNKNKKQHQKNNNNKRNQRGRGRQPEMNKAKPLPEKVTFS 154
>DNAA_STRCH (Q9ZH75) Chromosomal replication initiator protein dnaA| Length = 624 Score = 28.5 bits (62), Expect = 9.6 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Frame = +2 Query: 281 EVRTGHPLHPGHRRARP----QHPGRRQRAVHPRGRRHLGAQPRLRGAQPFP 424 + R+G P H G+ + RP Q G RQ H GR G+ P GAQP P Sbjct: 225 DYRSGPPEHQGYEQQRPDRQDQGQGPRQGG-HGPGRTG-GSVPGPMGAQPAP 274
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 28.5 bits (62), Expect = 9.6 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%) Frame = +2 Query: 299 PLHPGHRRARPQHPGRRQRAVHPRG---RRHLGAQPRLRG 409 P P H A P HP + P R LG QP LRG Sbjct: 1010 PPQPHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRG 1049
>EXP24_ARATH (Q9FL76) Alpha-expansin 24 precursor (AtEXPA24) (At-EXP24) (AtEx24)| (Ath-ExpAlpha-1.19) Length = 312 Score = 28.5 bits (62), Expect = 9.6 Identities = 19/59 (32%), Positives = 19/59 (32%) Frame = +2 Query: 242 HVPGGDGADLGDREVRTGHPLHPGHRRARPQHPGRRQRAVHPRGRRHLGAQPRLRGAQP 418 HVPGG H HP H A P H HP GA P G P Sbjct: 33 HVPGGRPGAHPSHGAHPAHGAHPSH-GAHPSHGAHPSHGAHPSH----GALPSHGGQVP 86
>ACVS1_PENCH (P19787) N-(5-amino-5-carboxypentanoyl)-L-cysteinyl-D-valine synthase| (EC 6.3.2.26) (Delta-(L-alpha-aminoadipyl)-L-cysteinyl-D-valine synthetase) (ACV synthetase) (ACVS) Length = 3746 Score = 28.5 bits (62), Expect = 9.6 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 3/31 (9%) Frame = +3 Query: 315 IGGLDHSIPAAANGQFIPGADDT---WVPNP 398 + GLD +P+ ++ Q +P DDT WV NP Sbjct: 3699 LNGLDSLLPSDSDVQLVPLTDDTHFSWVGNP 3729
>PDCD8_DROME (Q9VQ79) Putative oxidoreductase CG7263, mitochondrial precursor| (EC 1.-.-.-) Length = 739 Score = 28.5 bits (62), Expect = 9.6 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +1 Query: 7 KATASDRDSKKSSLAQLATTSPDHSELPSH 96 KA A + + K+ +A LAT+ P +LP H Sbjct: 225 KAEAEEEERKRRLVAGLATSPPSSEDLPKH 254
>PUTX_EMENI (P18696) Proline-specific permease (Proline transport protein)| Length = 550 Score = 28.5 bits (62), Expect = 9.6 Identities = 22/63 (34%), Positives = 33/63 (52%) Frame = -2 Query: 388 TQVSSAPGMNCPLAAAGMLWSSPPMSGM*WVPSSYLPIPEISTVPSWNVSGRFTTSSAGF 209 TQ AP + + A ++W + G ++YLPI +S VP + GRFT S GF Sbjct: 68 TQTGPAPLLMSYIVMASIVWFVMNVLGE---MTTYLPIRGVS-VPY--LIGRFTEPSIGF 121 Query: 208 SAG 200 ++G Sbjct: 122 ASG 124 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.302 0.115 0.332 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,713,807 Number of Sequences: 219361 Number of extensions: 1258032 Number of successful extensions: 3225 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3047 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3203 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3246866728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 43 (21.9 bits)
