ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet102f01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 129 bits (65), Expect = 3e-27 Identities = 68/69 (98%) Strand = Plus / Plus Query: 125 ctgattccggggttgccggaggaggtggcgagggagtgcctcatacgggtggggttcgac 184 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 22983913 ctgattccggggttgccggaggaggtggcgagggagtgcctcatccgggtggggttcgac 22983972 Query: 185 cagctgccg 193 ||||||||| Sbjct: 22983973 cagctgccg 22983981
>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0502H06 Length = 165630 Score = 129 bits (65), Expect = 3e-27 Identities = 68/69 (98%) Strand = Plus / Plus Query: 125 ctgattccggggttgccggaggaggtggcgagggagtgcctcatacgggtggggttcgac 184 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 158735 ctgattccggggttgccggaggaggtggcgagggagtgcctcatccgggtggggttcgac 158794 Query: 185 cagctgccg 193 ||||||||| Sbjct: 158795 cagctgccg 158803
>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652A05 Length = 150455 Score = 129 bits (65), Expect = 3e-27 Identities = 68/69 (98%) Strand = Plus / Plus Query: 125 ctgattccggggttgccggaggaggtggcgagggagtgcctcatacgggtggggttcgac 184 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 50398 ctgattccggggttgccggaggaggtggcgagggagtgcctcatccgggtggggttcgac 50457 Query: 185 cagctgccg 193 ||||||||| Sbjct: 50458 cagctgccg 50466
>dbj|AK110986.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-D04, full insert sequence Length = 1650 Score = 129 bits (65), Expect = 3e-27 Identities = 68/69 (98%) Strand = Plus / Minus Query: 125 ctgattccggggttgccggaggaggtggcgagggagtgcctcatacgggtggggttcgac 184 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1270 ctgattccggggttgccggaggaggtggcgagggagtgcctcatccgggtggggttcgac 1211 Query: 185 cagctgccg 193 ||||||||| Sbjct: 1210 cagctgccg 1202
>dbj|AK072246.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001I15, full insert sequence Length = 1403 Score = 129 bits (65), Expect = 3e-27 Identities = 68/69 (98%) Strand = Plus / Plus Query: 125 ctgattccggggttgccggaggaggtggcgagggagtgcctcatacgggtggggttcgac 184 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 133 ctgattccggggttgccggaggaggtggcgagggagtgcctcatccgggtggggttcgac 192 Query: 185 cagctgccg 193 ||||||||| Sbjct: 193 cagctgccg 201
>dbj|AK065435.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022O04, full insert sequence Length = 1455 Score = 129 bits (65), Expect = 3e-27 Identities = 68/69 (98%) Strand = Plus / Plus Query: 125 ctgattccggggttgccggaggaggtggcgagggagtgcctcatacgggtggggttcgac 184 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 132 ctgattccggggttgccggaggaggtggcgagggagtgcctcatccgggtggggttcgac 191 Query: 185 cagctgccg 193 ||||||||| Sbjct: 192 cagctgccg 200
>gb|AY596555.1| Saccharum officinarum clone SCCCCL2001B07, complete sequence Length = 1515 Score = 89.7 bits (45), Expect = 3e-15 Identities = 72/81 (88%) Strand = Plus / Minus Query: 113 gcaatggccgacctgattccggggttgccggaggaggtggcgagggagtgcctcatacgg 172 ||||||| ||| |||| || ||||||||||||||||||||||||||||||||| | || Sbjct: 1375 gcaatgggcgagttgatccctgggttgccggaggaggtggcgagggagtgcctcgtccga 1316 Query: 173 gtggggttcgaccagctgccg 193 ||||| ||||||||||||||| Sbjct: 1315 gtgggcttcgaccagctgccg 1295
>ref|XM_464578.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1146 Score = 50.1 bits (25), Expect = 0.003 Identities = 58/69 (84%) Strand = Plus / Plus Query: 125 ctgattccggggttgccggaggaggtggcgagggagtgcctcatacgggtggggttcgac 184 |||||||||||| | |||||||| ||||| |||| ||||| | || ||||| |||||| Sbjct: 16 ctgattccggggctaccggaggaagtggcccgggaatgcctgctgcgcgtgggattcgac 75 Query: 185 cagctgccg 193 ||||||||| Sbjct: 76 cagctgccg 84
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 50.1 bits (25), Expect = 0.003 Identities = 58/69 (84%) Strand = Plus / Minus Query: 125 ctgattccggggttgccggaggaggtggcgagggagtgcctcatacgggtggggttcgac 184 |||||||||||| | |||||||| ||||| |||| ||||| | || ||||| |||||| Sbjct: 6094755 ctgattccggggctaccggaggaagtggcccgggaatgcctgctgcgcgtgggattcgac 6094696 Query: 185 cagctgccg 193 ||||||||| Sbjct: 6094695 cagctgccg 6094687 Score = 38.2 bits (19), Expect = 9.6 Identities = 31/35 (88%) Strand = Plus / Plus Query: 131 ccggggttgccggaggaggtggcgagggagtgcct 165 |||||||||||||| || ||||| | ||||||||| Sbjct: 21385083 ccggggttgccggacgacgtggccatggagtgcct 21385117
>dbj|AP003977.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_A02 Length = 175153 Score = 50.1 bits (25), Expect = 0.003 Identities = 58/69 (84%) Strand = Plus / Minus Query: 125 ctgattccggggttgccggaggaggtggcgagggagtgcctcatacgggtggggttcgac 184 |||||||||||| | |||||||| ||||| |||| ||||| | || ||||| |||||| Sbjct: 60237 ctgattccggggctaccggaggaagtggcccgggaatgcctgctgcgcgtgggattcgac 60178 Query: 185 cagctgccg 193 ||||||||| Sbjct: 60177 cagctgccg 60169
>dbj|AP003974.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_F05 Length = 147472 Score = 50.1 bits (25), Expect = 0.003 Identities = 58/69 (84%) Strand = Plus / Minus Query: 125 ctgattccggggttgccggaggaggtggcgagggagtgcctcatacgggtggggttcgac 184 |||||||||||| | |||||||| ||||| |||| ||||| | || ||||| |||||| Sbjct: 115594 ctgattccggggctaccggaggaagtggcccgggaatgcctgctgcgcgtgggattcgac 115535 Query: 185 cagctgccg 193 ||||||||| Sbjct: 115534 cagctgccg 115526
>gb|AC102376.14| Mus musculus chromosome 18, clone RP23-314H11, complete sequence Length = 190153 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Minus Query: 70 cttcacttcaagttcattgatg 91 |||||||||||||||||||||| Sbjct: 39738 cttcacttcaagttcattgatg 39717
>gb|AC132464.3| Mus musculus BAC clone RP23-53K19 from chromosome 18, complete sequence Length = 175801 Score = 44.1 bits (22), Expect = 0.16 Identities = 22/22 (100%) Strand = Plus / Plus Query: 70 cttcacttcaagttcattgatg 91 |||||||||||||||||||||| Sbjct: 244 cttcacttcaagttcattgatg 265
>gb|AE009818.1|AE009818 Pyrobaculum aerophilum strain IM2 section 73 of 201 of the complete genome Length = 9108 Score = 42.1 bits (21), Expect = 0.61 Identities = 21/21 (100%) Strand = Plus / Plus Query: 141 cggaggaggtggcgagggagt 161 ||||||||||||||||||||| Sbjct: 162 cggaggaggtggcgagggagt 182
>gb|AC104285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0035J08, complete sequence Length = 117555 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 ttgccggaggaggtggcgag 156 |||||||||||||||||||| Sbjct: 68231 ttgccggaggaggtggcgag 68250
>emb|AL353782.23| Human DNA sequence from clone RP11-207C11 on chromosome 9 Contains the 5' end of the GPR51 gene for G protein-coupled receptor 51 (HG20, GABBR2, GPRC3B, GABABR2), the 3' end of a novel gene (FLJ36928), a CDC10 cell division cycle 10 homolog (S. cerevisiae) (SEPT7) pseudogene and a CpG island, complete sequence Length = 165358 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 cgcacacagcagatcaagca 46 |||||||||||||||||||| Sbjct: 4445 cgcacacagcagatcaagca 4464
>gb|AC158575.3| Mus musculus chromosome 7, clone RP23-275H16, complete sequence Length = 221489 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 cttttcttgctcacttcact 76 |||||||||||||||||||| Sbjct: 41187 cttttcttgctcacttcact 41168
>emb|AL034557.8|PFMAL4P1 Plasmodium falciparum MAL4P1 Length = 347582 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 ttccggggttgccggaggaggtgg 152 |||||||||||| ||||||||||| Sbjct: 41575 ttccggggttgctggaggaggtgg 41552
>gb|AC084365.16| Homo sapiens 12 BAC RP11-632B21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 188629 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 tcacttcacttcaagttcattgat 90 |||||||||||||| ||||||||| Sbjct: 110711 tcacttcacttcaatttcattgat 110688
>gb|AC103710.2| Homo sapiens chromosome 11, clone CTD-2379P15, complete sequence Length = 151970 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 tcacttcacttcaagttcat 86 |||||||||||||||||||| Sbjct: 47598 tcacttcacttcaagttcat 47579
>gb|AC011711.8| Homo sapiens chromosome 11, clone RP11-309J20, complete sequence Length = 149542 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 tcacttcacttcaagttcat 86 |||||||||||||||||||| Sbjct: 116842 tcacttcacttcaagttcat 116823
>gb|AC104340.10| Mus musculus chromosome 7, clone RP24-495M13, complete sequence Length = 170605 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 cttttcttgctcacttcact 76 |||||||||||||||||||| Sbjct: 11534 cttttcttgctcacttcact 11553
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 137 ttgccggaggaggtggcgag 156 |||||||||||||||||||| Sbjct: 292711 ttgccggaggaggtggcgag 292730
>gb|AC150263.4| Aedes aegypti, clone XX-44H3, complete sequence Length = 131682 Score = 40.1 bits (20), Expect = 2.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 39 atcaagcacgctctcactcttttcttgctcac 70 |||||||| |||||| ||||||||||||||| Sbjct: 62992 atcaagcatgctctcgatcttttcttgctcac 63023
>gb|AC002462.1|AC002462 Human BAC clone CTA-210I4, complete sequence Length = 100258 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 67 tcacttcacttcaagttcattgat 90 |||||||||||||| ||||||||| Sbjct: 13845 tcacttcacttcaatttcattgat 13822
>dbj|AK103444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129E14, full insert sequence Length = 1578 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 ttgccggaggaggtggcgag 156 |||||||||||||||||||| Sbjct: 275 ttgccggaggaggtggcgag 256
>gb|AC147899.2| Xenopus tropicalis clone CH216-53A2, complete sequence Length = 158405 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 89 atgagcagctgctttgaggc 108 |||||||||||||||||||| Sbjct: 25402 atgagcagctgctttgaggc 25421
>ref|XM_466267.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1200 Score = 38.2 bits (19), Expect = 9.6 Identities = 31/35 (88%) Strand = Plus / Plus Query: 131 ccggggttgccggaggaggtggcgagggagtgcct 165 |||||||||||||| || ||||| | ||||||||| Sbjct: 76 ccggggttgccggacgacgtggccatggagtgcct 110
>gb|AC007889.9| Drosophila melanogaster clone BACR48E12, complete sequence Length = 182182 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 138 tgccggaggaggtggcgagggag 160 |||||||||||||||||| |||| Sbjct: 61468 tgccggaggaggtggcgacggag 61446
>gb|AC090900.3| Drosophila melanogaster clone BACR30C07, complete sequence Length = 186286 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 38 gatcaagcacgctctcact 56 ||||||||||||||||||| Sbjct: 112599 gatcaagcacgctctcact 112617
>gb|AC044864.6| Mus musculus chromosome 3, clone RP23-168E14, complete sequence Length = 224119 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 acacaagaacatcagcacacagc 23 |||||||||| |||||||||||| Sbjct: 101430 acacaagaacgtcagcacacagc 101452
>gb|AC120150.9| Mus musculus chromosome 16, clone RP24-241C15, complete sequence Length = 166172 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 1 acacaagaacatcagcacacagc 23 |||||||||||| |||||||||| Sbjct: 82336 acacaagaacataagcacacagc 82314
>gb|AC116051.4| Mus musculus BAC clone RP23-4L11 from 3, complete sequence Length = 224674 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 acacaagaacatcagcacacagc 23 |||||||||| |||||||||||| Sbjct: 158563 acacaagaacgtcagcacacagc 158585
>emb|AL355535.14| Human DNA sequence from clone RP11-494N1 on chromosome 9 Contains the 5' end of the GNA14 gene for guanine nucleotide binding protein (G protein) alpha 14, the 3' end of the GNAQ gene for guanine nucleotide binding protein (G protein) q polypeptide and two CpG islands, complete sequence Length = 186658 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 81 gttcattgatgagcagctg 99 ||||||||||||||||||| Sbjct: 160993 gttcattgatgagcagctg 160975
>ref|XM_966311.1| PREDICTED: Tribolium castaneum similar to CG2663-PB, isoform B (LOC660049), mRNA Length = 924 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 142 ggaggaggtggcgagggag 160 ||||||||||||||||||| Sbjct: 828 ggaggaggtggcgagggag 846
>ref|XM_966252.1| PREDICTED: Tribolium castaneum hypothetical protein LOC659988 (LOC659988), mRNA Length = 1677 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 142 ggaggaggtggcgagggag 160 ||||||||||||||||||| Sbjct: 862 ggaggaggtggcgagggag 844
>emb|AJ297654.1|SSC297654 Sus scrofa SERPINA3-2 gene for alpha-1-antichymotrypsin 2, exons 1-5 Length = 9843 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 81 gttcattgatgagcagctg 99 ||||||||||||||||||| Sbjct: 3056 gttcattgatgagcagctg 3074
>gb|AC090436.37| Chlamydomonas reinhardtii clone cr-3h1, complete sequence Length = 102653 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 142 ggaggaggtggcgagggag 160 ||||||||||||||||||| Sbjct: 95667 ggaggaggtggcgagggag 95649
>gb|AC090435.28| Chlamydomonas reinhardtii clone cr-32m22, complete sequence Length = 79677 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 142 ggaggaggtggcgagggag 160 ||||||||||||||||||| Sbjct: 34206 ggaggaggtggcgagggag 34224
>gb|AC016933.20| Homo sapiens 3 BAC RP11-166D18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153763 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 52 tcactcttttcttgctcac 70 ||||||||||||||||||| Sbjct: 6959 tcactcttttcttgctcac 6941
>ref|NM_169442.1| Drosophila melanogaster CG12213-RA, transcript variant A (CG12213), mRNA Length = 2074 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 138 tgccggaggaggtggcgagggag 160 |||||||||||||||||| |||| Sbjct: 1856 tgccggaggaggtggcgacggag 1878
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 143 gaggaggtggcgagggagt 161 ||||||||||||||||||| Sbjct: 2030023 gaggaggtggcgagggagt 2030041
>ref|NM_141876.1| Drosophila melanogaster CG12213-RB, transcript variant B (CG12213), mRNA Length = 1873 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 138 tgccggaggaggtggcgagggag 160 |||||||||||||||||| |||| Sbjct: 1655 tgccggaggaggtggcgacggag 1677
>gb|AC024032.5| Homo sapiens BAC clone RP11-196J14 from 4, complete sequence Length = 177038 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 61 tcttgctcacttcacttca 79 ||||||||||||||||||| Sbjct: 23518 tcttgctcacttcacttca 23500
>gb|AC009532.9| Homo sapiens chromosome , clone RP11-58H20, complete sequence Length = 165698 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 67 tcacttcacttcaagttca 85 ||||||||||||||||||| Sbjct: 69057 tcacttcacttcaagttca 69039
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 61 tcttgctcacttcacttca 79 ||||||||||||||||||| Sbjct: 10293165 tcttgctcacttcacttca 10293183
>gb|AC007725.5|AC007725 Drosophila melanogaster, chromosome 3R, region 87A-87A, BAC clone BACR03N24, complete sequence Length = 144152 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 138 tgccggaggaggtggcgagggag 160 |||||||||||||||||| |||| Sbjct: 142274 tgccggaggaggtggcgacggag 142252
>ref|NM_213787.1| Sus scrofa alpha-1-antichymotrypsin 2 (SERPINA3-2), mRNA Length = 1496 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 81 gttcattgatgagcagctg 99 ||||||||||||||||||| Sbjct: 480 gttcattgatgagcagctg 498
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 139 gccggaggaggtggcgagg 157 ||||||||||||||||||| Sbjct: 1085652 gccggaggaggtggcgagg 1085670
>dbj|AP004144.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1712_E04 Length = 110098 Score = 38.2 bits (19), Expect = 9.6 Identities = 31/35 (88%) Strand = Plus / Plus Query: 131 ccggggttgccggaggaggtggcgagggagtgcct 165 |||||||||||||| || ||||| | ||||||||| Sbjct: 45036 ccggggttgccggacgacgtggccatggagtgcct 45070
>gb|AE003693.3| Drosophila melanogaster chromosome 3R, section 31 of 118 of the complete sequence Length = 226782 Score = 38.2 bits (19), Expect = 9.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 138 tgccggaggaggtggcgagggag 160 |||||||||||||||||| |||| Sbjct: 214634 tgccggaggaggtggcgacggag 214612
>gb|AE003812.4| Drosophila melanogaster chromosome 2R, section 38 of 73 of the complete sequence Length = 255772 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 38 gatcaagcacgctctcact 56 ||||||||||||||||||| Sbjct: 237456 gatcaagcacgctctcact 237474
>gb|BC085067.1| Xenopus laevis hypothetical LOC495483, mRNA (cDNA clone MGC:97878 IMAGE:4970193), complete cds Length = 1557 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 56 tcttttcttgctcacttca 74 ||||||||||||||||||| Sbjct: 796 tcttttcttgctcacttca 778
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 61 tcttgctcacttcacttca 79 ||||||||||||||||||| Sbjct: 10293047 tcttgctcacttcacttca 10293065
>emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb0115B15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 135439 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 61 tcttgctcacttcacttca 79 ||||||||||||||||||| Sbjct: 56084 tcttgctcacttcacttca 56102
>gb|AC004766.1|AC004766 Drosophila melanogaster DNA sequence (P1s DS08108 (D156) and DS09214 (D202)), complete sequence Length = 93932 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 38 gatcaagcacgctctcact 56 ||||||||||||||||||| Sbjct: 90014 gatcaagcacgctctcact 89996
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 87 tgatgagcagctgctttga 105 ||||||||||||||||||| Sbjct: 552690 tgatgagcagctgctttga 552708
>dbj|AP002934.1| Scopelogadus mizolepis mitochondrial DNA, complete genome, except for D-loop Length = 16375 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 143 gaggaggtggcgagggagt 161 ||||||||||||||||||| Sbjct: 4752 gaggaggtggcgagggagt 4734
>gb|M29508.1|PIGA1ACM Pig alpha-1-antichymotrypsin (Pi2) mRNA Length = 1490 Score = 38.2 bits (19), Expect = 9.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 81 gttcattgatgagcagctg 99 ||||||||||||||||||| Sbjct: 477 gttcattgatgagcagctg 495 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,555,639 Number of Sequences: 3902068 Number of extensions: 1555639 Number of successful extensions: 115625 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 115155 Number of HSP's gapped (non-prelim): 470 length of query: 193 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 171 effective length of database: 17,147,199,772 effective search space: 2932171161012 effective search space used: 2932171161012 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
