ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet102e05 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK106420.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-B02, full insert sequence Length = 1590 Score = 133 bits (67), Expect = 6e-28 Identities = 157/187 (83%) Strand = Plus / Plus Query: 68 tcgtgggcgccgggctcgctggcctcgccgccgcactcgggctacacaggaaaagggtga 127 |||||||||||||| |||| |||||||||| || |||||||| ||||||||| |||||| Sbjct: 272 tcgtgggcgccgggatcgccggcctcgccgtggctctcgggctgcacaggaaaggggtga 331 Query: 128 ggagcgtggtgctggagtcgtccccggagctccgggcgtcggggttcgccttcgccacgt 187 | || ||||||| ||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 332 agtgctcggtgctgaagtcgtcgccggagctccgggcgtcggggttcgccttcgcgacgt 391 Query: 188 ggcccaacgccttccgcgcgctggacgccctcggcgtcggcgacgagatcaggaagctcc 247 || | ||||| | | ||||| ||| ||| || || |||||| ||||||||||||| | Sbjct: 392 ggacgaacgcgtggcaagcgcttgacaaccttggggtgggcgacaagatcaggaagcttc 451 Query: 248 acctgca 254 | ||||| Sbjct: 452 atctgca 458 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 382 ggcaccatccgctactcctccaagat 407 ||||||||||| |||||||||||||| Sbjct: 607 ggcaccatccgttactcctccaagat 632
>dbj|AK106358.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-A09, full insert sequence Length = 1661 Score = 133 bits (67), Expect = 6e-28 Identities = 157/187 (83%) Strand = Plus / Plus Query: 54 cgaggacatcgtgatcgtgggcgccgggctcgctggcctcgccgccgcactcgggctaca 113 ||||| |||||| |||| |||||||| ||||| || ||||| | || |||||| |||| Sbjct: 120 cgagggcatcgtcatcgccggcgccggcctcgcggggctcgcgacggcgctcgggttaca 179 Query: 114 caggaaaagggtgaggagcgtggtgctggagtcgtccccggagctccgggcgtcggggtt 173 ||||||| ||||||||||| |||||||||||||||| || ||| |||||||| ||||| Sbjct: 180 caggaaaggggtgaggagcctggtgctggagtcgtcggcgacgctgcgggcgtccgggtt 239 Query: 174 cgccttcgccacgtggcccaacgccttccgcgcgctggacgccctcggcgtcggcgacga 233 ||| ||| | || ||| | ||||||||||||||||| |||||||| || ||||||||| | Sbjct: 240 cgcgttcacgacatggacgaacgccttccgcgcgctcgacgcccttggtgtcggcgacaa 299 Query: 234 gatcagg 240 ||||||| Sbjct: 300 gatcagg 306
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 109 bits (55), Expect = 8e-21 Identities = 109/127 (85%) Strand = Plus / Plus Query: 114 caggaaaagggtgaggagcgtggtgctggagtcgtccccggagctccgggcgtcggggtt 173 ||||||| ||||||||||| |||||||||||||||| || ||| |||||||| ||||| Sbjct: 2946684 caggaaaggggtgaggagcctggtgctggagtcgtcggcgacgctgcgggcgtccgggtt 2946743 Query: 174 cgccttcgccacgtggcccaacgccttccgcgcgctggacgccctcggcgtcggcgacga 233 ||| ||| | || ||| | ||||||||||||||||| |||||||| || ||||||||| | Sbjct: 2946744 cgcgttcacgacatggacgaacgccttccgcgcgctcgacgcccttggtgtcggcgacaa 2946803 Query: 234 gatcagg 240 ||||||| Sbjct: 2946804 gatcagg 2946810 Score = 97.6 bits (49), Expect = 3e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 114 caggaaaagggtgaggagcgtggtgctggagtcgtccccggagctccgggcgtcggggtt 173 ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||| Sbjct: 2940398 caggaaaggggtgaagtgctcggtgctggagtcgtcgccggagctccgggcgtcggggtt 2940457 Query: 174 cgccttcgccacgtggcccaacgccttccgcgcgctggacgccctcggcgtcggcgacga 233 ||||||||| |||||| | ||||| | | ||||| ||| ||| || || |||||| | Sbjct: 2940458 cgccttcgcgacgtggacgaacgcgtggcaagcgcttgacaaccttggggtgggcgacaa 2940517 Query: 234 gatcaggaagctccacctgca 254 |||||||||||| || ||||| Sbjct: 2940518 gatcaggaagcttcatctgca 2940538 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 114 caggaaaagggtgaggagcgtggtgctggagtcgtccccggagctccgggcgtcggggtt 173 ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||| Sbjct: 2916768 caggaaaggggtgaagtgccgggtgctggagtcgtcgccggagctccgggcgtcggggtt 2916827 Query: 174 cgccttcgccacgtgg 189 |||| |||| |||||| Sbjct: 2916828 cgccatcgcgacgtgg 2916843 Score = 75.8 bits (38), Expect = 1e-10 Identities = 107/130 (82%) Strand = Plus / Plus Query: 114 caggaaaagggtgaggagcgtggtgctggagtcgtccccggagctccgggcgtcggggtt 173 ||||||| |||||| | || |||||| |||||||| ||||||||| ||||||||||||| Sbjct: 2931495 caggaaaggggtgaagtgcacggtgctagagtcgtcgccggagctcagggcgtcggggtt 2931554 Query: 174 cgccttcgccacgtggcccaacgccttccgcgcgctggacgccctcggcgtcggcgacga 233 |||| |||| |||||| || || || | ||||| |||||||| || || |||||| | Sbjct: 2931555 cgccatcgcgacgtggaggaatgcgttgcaagcgcttgacgcccttggggtaggcgacaa 2931614 Query: 234 gatcaggaag 243 |||||||||| Sbjct: 2931615 gatcaggaag 2931624 Score = 73.8 bits (37), Expect = 4e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 125 tgaggagcgtggtgctggagtcgtccccggagctccgggcgtcggggttcgccttcgcca 184 ||||||||||||||||||||||||| ||| ||| ||| |||| ||||| || ||| || Sbjct: 2943671 tgaggagcgtggtgctggagtcgtcgccgacgctgcggacgtccgggttggcgttcatca 2943730 Query: 185 cgtggcccaacgccttccgcgcgctggacgccctcggcgtcggcgacgagatcagga 241 | ||| | ||||||||||||||||| || ||||| || || |||||| |||| |||| Sbjct: 2943731 catggacgaacgccttccgcgcgcttgatgcccttggggtaggcgacaagatgagga 2943787 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 382 ggcaccatccgctactcctccaagat 407 |||||||||||||||||||||||||| Sbjct: 2944717 ggcaccatccgctactcctccaagat 2944742 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 68 tcgtgggcgccgggctcgctggcctcgccgccgcactcgggctacacagg 117 |||||||||||||| |||| |||||||||| || |||||||| |||||| Sbjct: 2940259 tcgtgggcgccgggatcgccggcctcgccgtggctctcgggctgcacagg 2940308 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 382 ggcaccatccgctactcctccaagat 407 |||||||||||||||||||||||||| Sbjct: 2933221 ggcaccatccgctactcctccaagat 2933246 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 370 gagctgccggagggcaccatccgctactcctccaagat 407 ||||||||||||||||||||| | | ||| |||||||| Sbjct: 2976136 gagctgccggagggcaccatcaggttctcttccaagat 2976173 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 382 ggcaccatccgctactcctccaagat 407 ||||||||||| |||||||||||||| Sbjct: 2940917 ggcaccatccgttactcctccaagat 2940942
>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15, complete sequence Length = 166282 Score = 109 bits (55), Expect = 8e-21 Identities = 109/127 (85%) Strand = Plus / Plus Query: 114 caggaaaagggtgaggagcgtggtgctggagtcgtccccggagctccgggcgtcggggtt 173 ||||||| ||||||||||| |||||||||||||||| || ||| |||||||| ||||| Sbjct: 84171 caggaaaggggtgaggagcctggtgctggagtcgtcggcgacgctgcgggcgtccgggtt 84230 Query: 174 cgccttcgccacgtggcccaacgccttccgcgcgctggacgccctcggcgtcggcgacga 233 ||| ||| | || ||| | ||||||||||||||||| |||||||| || ||||||||| | Sbjct: 84231 cgcgttcacgacatggacgaacgccttccgcgcgctcgacgcccttggtgtcggcgacaa 84290 Query: 234 gatcagg 240 ||||||| Sbjct: 84291 gatcagg 84297 Score = 97.6 bits (49), Expect = 3e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 114 caggaaaagggtgaggagcgtggtgctggagtcgtccccggagctccgggcgtcggggtt 173 ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||| Sbjct: 77885 caggaaaggggtgaagtgctcggtgctggagtcgtcgccggagctccgggcgtcggggtt 77944 Query: 174 cgccttcgccacgtggcccaacgccttccgcgcgctggacgccctcggcgtcggcgacga 233 ||||||||| |||||| | ||||| | | ||||| ||| ||| || || |||||| | Sbjct: 77945 cgccttcgcgacgtggacgaacgcgtggcaagcgcttgacaaccttggggtgggcgacaa 78004 Query: 234 gatcaggaagctccacctgca 254 |||||||||||| || ||||| Sbjct: 78005 gatcaggaagcttcatctgca 78025 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 114 caggaaaagggtgaggagcgtggtgctggagtcgtccccggagctccgggcgtcggggtt 173 ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||| Sbjct: 54255 caggaaaggggtgaagtgccgggtgctggagtcgtcgccggagctccgggcgtcggggtt 54314 Query: 174 cgccttcgccacgtgg 189 |||| |||| |||||| Sbjct: 54315 cgccatcgcgacgtgg 54330 Score = 75.8 bits (38), Expect = 1e-10 Identities = 107/130 (82%) Strand = Plus / Plus Query: 114 caggaaaagggtgaggagcgtggtgctggagtcgtccccggagctccgggcgtcggggtt 173 ||||||| |||||| | || |||||| |||||||| ||||||||| ||||||||||||| Sbjct: 68982 caggaaaggggtgaagtgcacggtgctagagtcgtcgccggagctcagggcgtcggggtt 69041 Query: 174 cgccttcgccacgtggcccaacgccttccgcgcgctggacgccctcggcgtcggcgacga 233 |||| |||| |||||| || || || | ||||| |||||||| || || |||||| | Sbjct: 69042 cgccatcgcgacgtggaggaatgcgttgcaagcgcttgacgcccttggggtaggcgacaa 69101 Query: 234 gatcaggaag 243 |||||||||| Sbjct: 69102 gatcaggaag 69111 Score = 73.8 bits (37), Expect = 4e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 125 tgaggagcgtggtgctggagtcgtccccggagctccgggcgtcggggttcgccttcgcca 184 ||||||||||||||||||||||||| ||| ||| ||| |||| ||||| || ||| || Sbjct: 81158 tgaggagcgtggtgctggagtcgtcgccgacgctgcggacgtccgggttggcgttcatca 81217 Query: 185 cgtggcccaacgccttccgcgcgctggacgccctcggcgtcggcgacgagatcagga 241 | ||| | ||||||||||||||||| || ||||| || || |||||| |||| |||| Sbjct: 81218 catggacgaacgccttccgcgcgcttgatgcccttggggtaggcgacaagatgagga 81274 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 382 ggcaccatccgctactcctccaagat 407 |||||||||||||||||||||||||| Sbjct: 82204 ggcaccatccgctactcctccaagat 82229 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 68 tcgtgggcgccgggctcgctggcctcgccgccgcactcgggctacacagg 117 |||||||||||||| |||| |||||||||| || |||||||| |||||| Sbjct: 77746 tcgtgggcgccgggatcgccggcctcgccgtggctctcgggctgcacagg 77795 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 382 ggcaccatccgctactcctccaagat 407 |||||||||||||||||||||||||| Sbjct: 70708 ggcaccatccgctactcctccaagat 70733 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 370 gagctgccggagggcaccatccgctactcctccaagat 407 ||||||||||||||||||||| | | ||| |||||||| Sbjct: 113623 gagctgccggagggcaccatcaggttctcttccaagat 113660 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 382 ggcaccatccgctactcctccaagat 407 ||||||||||| |||||||||||||| Sbjct: 78404 ggcaccatccgttactcctccaagat 78429
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 109 bits (55), Expect = 8e-21 Identities = 109/127 (85%) Strand = Plus / Plus Query: 114 caggaaaagggtgaggagcgtggtgctggagtcgtccccggagctccgggcgtcggggtt 173 ||||||| ||||||||||| |||||||||||||||| || ||| |||||||| ||||| Sbjct: 2946795 caggaaaggggtgaggagcctggtgctggagtcgtcggcgacgctgcgggcgtccgggtt 2946854 Query: 174 cgccttcgccacgtggcccaacgccttccgcgcgctggacgccctcggcgtcggcgacga 233 ||| ||| | || ||| | ||||||||||||||||| |||||||| || ||||||||| | Sbjct: 2946855 cgcgttcacgacatggacgaacgccttccgcgcgctcgacgcccttggtgtcggcgacaa 2946914 Query: 234 gatcagg 240 ||||||| Sbjct: 2946915 gatcagg 2946921 Score = 97.6 bits (49), Expect = 3e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 114 caggaaaagggtgaggagcgtggtgctggagtcgtccccggagctccgggcgtcggggtt 173 ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||| Sbjct: 2940509 caggaaaggggtgaagtgctcggtgctggagtcgtcgccggagctccgggcgtcggggtt 2940568 Query: 174 cgccttcgccacgtggcccaacgccttccgcgcgctggacgccctcggcgtcggcgacga 233 ||||||||| |||||| | ||||| | | ||||| ||| ||| || || |||||| | Sbjct: 2940569 cgccttcgcgacgtggacgaacgcgtggcaagcgcttgacaaccttggggtgggcgacaa 2940628 Query: 234 gatcaggaagctccacctgca 254 |||||||||||| || ||||| Sbjct: 2940629 gatcaggaagcttcatctgca 2940649 Score = 87.7 bits (44), Expect = 3e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 114 caggaaaagggtgaggagcgtggtgctggagtcgtccccggagctccgggcgtcggggtt 173 ||||||| |||||| | || ||||||||||||||| ||||||||||||||||||||||| Sbjct: 2916879 caggaaaggggtgaagtgccgggtgctggagtcgtcgccggagctccgggcgtcggggtt 2916938 Query: 174 cgccttcgccacgtgg 189 |||| |||| |||||| Sbjct: 2916939 cgccatcgcgacgtgg 2916954 Score = 75.8 bits (38), Expect = 1e-10 Identities = 107/130 (82%) Strand = Plus / Plus Query: 114 caggaaaagggtgaggagcgtggtgctggagtcgtccccggagctccgggcgtcggggtt 173 ||||||| |||||| | || |||||| |||||||| ||||||||| ||||||||||||| Sbjct: 2931606 caggaaaggggtgaagtgcacggtgctagagtcgtcgccggagctcagggcgtcggggtt 2931665 Query: 174 cgccttcgccacgtggcccaacgccttccgcgcgctggacgccctcggcgtcggcgacga 233 |||| |||| |||||| || || || | ||||| |||||||| || || |||||| | Sbjct: 2931666 cgccatcgcgacgtggaggaatgcgttgcaagcgcttgacgcccttggggtaggcgacaa 2931725 Query: 234 gatcaggaag 243 |||||||||| Sbjct: 2931726 gatcaggaag 2931735 Score = 73.8 bits (37), Expect = 4e-10 Identities = 97/117 (82%) Strand = Plus / Plus Query: 125 tgaggagcgtggtgctggagtcgtccccggagctccgggcgtcggggttcgccttcgcca 184 ||||||||||||||||||||||||| ||| ||| ||| |||| ||||| || ||| || Sbjct: 2943782 tgaggagcgtggtgctggagtcgtcgccgacgctgcggacgtccgggttggcgttcatca 2943841 Query: 185 cgtggcccaacgccttccgcgcgctggacgccctcggcgtcggcgacgagatcagga 241 | ||| | ||||||||||||||||| || ||||| || || |||||| |||| |||| Sbjct: 2943842 catggacgaacgccttccgcgcgcttgatgcccttggggtaggcgacaagatgagga 2943898 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 382 ggcaccatccgctactcctccaagat 407 |||||||||||||||||||||||||| Sbjct: 2944828 ggcaccatccgctactcctccaagat 2944853 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 68 tcgtgggcgccgggctcgctggcctcgccgccgcactcgggctacacagg 117 |||||||||||||| |||| |||||||||| || |||||||| |||||| Sbjct: 2940370 tcgtgggcgccgggatcgccggcctcgccgtggctctcgggctgcacagg 2940419 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 382 ggcaccatccgctactcctccaagat 407 |||||||||||||||||||||||||| Sbjct: 2933332 ggcaccatccgctactcctccaagat 2933357 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 370 gagctgccggagggcaccatccgctactcctccaagat 407 ||||||||||||||||||||| | | ||| |||||||| Sbjct: 2976247 gagctgccggagggcaccatcaggttctcttccaagat 2976284 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 382 ggcaccatccgctactcctccaagat 407 ||||||||||| |||||||||||||| Sbjct: 2941028 ggcaccatccgttactcctccaagat 2941053
>dbj|AK103088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033118I15, full insert sequence Length = 1518 Score = 81.8 bits (41), Expect = 2e-12 Identities = 137/169 (81%) Strand = Plus / Plus Query: 73 ggcgccgggctcgctggcctcgccgccgcactcgggctacacaggaaaagggtgaggagc 132 |||||||| ||||| || ||||| | || ||||| || ||||||||| | |||||||| Sbjct: 116 ggcgccggcctcgccgggctcgcagtggccctcggactgcacaggaaaggactgaggagc 175 Query: 133 gtggtgctggagtcgtccccggagctccgggcgtcggggttcgccttcgccacgtggccc 192 ||||||||||||||||| ||| ||| ||| |||| ||||| || ||| ||| ||| | Sbjct: 176 gtggtgctggagtcgtcgccgacgctgcggacgtccgggttggcgttcatcacatggacg 235 Query: 193 aacgccttccgcgcgctggacgccctcggcgtcggcgacgagatcagga 241 ||||||||||||||||| || ||||| || || |||||| |||| |||| Sbjct: 236 aacgccttccgcgcgcttgatgcccttggggtaggcgacaagatgagga 284 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 382 ggcaccatccgctactcctccaagat 407 |||||||||||||||||||||||||| Sbjct: 446 ggcaccatccgctactcctccaagat 471
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 420 acgagcacggcgacggcgccaag 442 ||||||||||||||||||||||| Sbjct: 1024993 acgagcacggcgacggcgccaag 1025015
>ref|XM_480050.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2722 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 68 tcgtgggcgccgggctcgctggcctcgccgccgc 101 |||| |||||||| ||||| |||||||||||||| Sbjct: 551 tcgtcggcgccggtctcgccggcctcgccgccgc 584
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 44.1 bits (22), Expect = 0.40 Identities = 37/42 (88%) Strand = Plus / Plus Query: 190 cccaacgccttccgcgcgctggacgccctcggcgtcggcgac 231 ||||||||||||| |||| | ||||| || |||||||||||| Sbjct: 808986 cccaacgccttccacgcgttcgacgcgctgggcgtcggcgac 809027 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 201 ccgcgcgctggacgccctcggcgt 224 ||||||||||||||| |||||||| Sbjct: 3335468 ccgcgcgctggacgcgctcggcgt 3335445
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 68 tcgtgggcgccgggctcgctggcctcgccgccgc 101 |||| |||||||| ||||| |||||||||||||| Sbjct: 2382383 tcgtcggcgccggtctcgccggcctcgccgccgc 2382350
>dbj|AP004381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0025F03 Length = 138042 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 68 tcgtgggcgccgggctcgctggcctcgccgccgc 101 |||| |||||||| ||||| |||||||||||||| Sbjct: 58353 tcgtcggcgccggtctcgccggcctcgccgccgc 58320
>dbj|AP005542.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0473D02 Length = 146185 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Minus Query: 68 tcgtgggcgccgggctcgctggcctcgccgccgc 101 |||| |||||||| ||||| |||||||||||||| Sbjct: 129882 tcgtcggcgccggtctcgccggcctcgccgccgc 129849
>dbj|AK120532.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128B21, full insert sequence Length = 2722 Score = 44.1 bits (22), Expect = 0.40 Identities = 31/34 (91%) Strand = Plus / Plus Query: 68 tcgtgggcgccgggctcgctggcctcgccgccgc 101 |||| |||||||| ||||| |||||||||||||| Sbjct: 551 tcgtcggcgccggtctcgccggcctcgccgccgc 584
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 341 gcgacgtgctgctgcaggtcct 362 |||||||||||||||||||||| Sbjct: 1029569 gcgacgtgctgctgcaggtcct 1029590
>gb|AE010303.1| Methanopyrus kandleri AV19 section 2 of 157 of the complete genome Length = 14338 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 gcgacgagatcaggaagctcc 247 ||||||||||||||||||||| Sbjct: 11693 gcgacgagatcaggaagctcc 11673
>ref|NM_192818.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2151 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 202 cgcgcgctggacgccctcggcgtcggcga 230 |||| ||||||||| |||||||||||||| Sbjct: 1546 cgcgtgctggacgcgctcggcgtcggcga 1574
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 342 cgacgtgctgctgcaggtcct 362 ||||||||||||||||||||| Sbjct: 460025 cgacgtgctgctgcaggtcct 460005
>ref|XM_536926.2| PREDICTED: Canis familiaris similar to exportin 6, transcript variant 1 (LOC479798), mRNA Length = 2907 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 acgtgctgctgcaggtcctgg 364 ||||||||||||||||||||| Sbjct: 2009 acgtgctgctgcaggtcctgg 2029
>ref|XM_855411.1| PREDICTED: Canis familiaris similar to exportin 6, transcript variant 4 (LOC479798), mRNA Length = 3120 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 acgtgctgctgcaggtcctgg 364 ||||||||||||||||||||| Sbjct: 2222 acgtgctgctgcaggtcctgg 2242
>ref|XM_855373.1| PREDICTED: Canis familiaris similar to exportin 6, transcript variant 3 (LOC479798), mRNA Length = 3392 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 344 acgtgctgctgcaggtcctgg 364 ||||||||||||||||||||| Sbjct: 2494 acgtgctgctgcaggtcctgg 2514
>ref|XM_541721.2| PREDICTED: Canis familiaris similar to teashirt 3 (LOC484607), mRNA Length = 3856 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 79 gggctcgctggcctcgccgccgcac 103 ||||||||||||||||| ||||||| Sbjct: 2127 gggctcgctggcctcgctgccgcac 2103
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 342 cgacgtgctgctgcaggtcct 362 ||||||||||||||||||||| Sbjct: 118029 cgacgtgctgctgcaggtcct 118009
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 342 cgacgtgctgctgcaggtcct 362 ||||||||||||||||||||| Sbjct: 117953 cgacgtgctgctgcaggtcct 117933
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 351 gctgcaggtcctggcggcggagctg 375 |||||||| |||||||||||||||| Sbjct: 3993355 gctgcagggcctggcggcggagctg 3993331
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 202 cgcgcgctggacgccctcggcgtcggcga 230 |||| ||||||||| |||||||||||||| Sbjct: 24610533 cgcgtgctggacgcgctcggcgtcggcga 24610561
>dbj|AP003328.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1040D09 Length = 148102 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 202 cgcgcgctggacgccctcggcgtcggcga 230 |||| ||||||||| |||||||||||||| Sbjct: 36496 cgcgtgctggacgcgctcggcgtcggcga 36524
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 ctggcggcggagctgccggag 381 ||||||||||||||||||||| Sbjct: 7260803 ctggcggcggagctgccggag 7260783
>dbj|AK072318.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029A13, full insert sequence Length = 2556 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 351 gctgcaggtcctggcggcggagctg 375 |||||||| |||||||||||||||| Sbjct: 149 gctgcagggcctggcggcggagctg 173
>gb|U73653.1|MBU73653 Mycobacterium bovis 63 kDa protein, 47 kDa protein and clpB gene, complete cds Length = 4874 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 342 cgacgtgctgctgcaggtcct 362 ||||||||||||||||||||| Sbjct: 1344 cgacgtgctgctgcaggtcct 1324
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 351 gctgcaggtcctggcggcggagctg 375 |||||||| |||||||||||||||| Sbjct: 3993342 gctgcagggcctggcggcggagctg 3993318
>emb|AL731882.2|CNS08C8M Oryza sativa chromosome 12, . BAC OSJNBb0028H07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132682 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 351 gctgcaggtcctggcggcggagctg 375 |||||||| |||||||||||||||| Sbjct: 29776 gctgcagggcctggcggcggagctg 29752
>emb|AM113472.1| Micromonospora sp. ML1 thiocoraline gene cluster Length = 64650 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 ctggcggcggagctgccggag 381 ||||||||||||||||||||| Sbjct: 37286 ctggcggcggagctgccggag 37306 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 ggcggcggagctgccggagg 382 |||||||||||||||||||| Sbjct: 48123 ggcggcggagctgccggagg 48142
>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome Length = 4607203 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ctggcggcggagctgccgga 380 |||||||||||||||||||| Sbjct: 3525320 ctggcggcggagctgccgga 3525339
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 tcggcgtcggcgacgagatc 237 |||||||||||||||||||| Sbjct: 2189334 tcggcgtcggcgacgagatc 2189353
>gb|DQ215306.1| Taeniopygia guttata clone 0058P0010C04 beta-globin mRNA-like mRNA, complete sequence Length = 610 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggcctcgccgccgcactcgg 107 |||||||||||||||||||| Sbjct: 151 ggcctcgccgccgcactcgg 132
>gb|DQ215305.1| Taeniopygia guttata clone 0061P0012A06 beta-globin mRNA-like mRNA, complete sequence Length = 614 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggcctcgccgccgcactcgg 107 |||||||||||||||||||| Sbjct: 154 ggcctcgccgccgcactcgg 135
>gb|DQ215304.1| Taeniopygia guttata clone 0058P0010A03 beta-globin mRNA-like mRNA, complete sequence Length = 609 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggcctcgccgccgcactcgg 107 |||||||||||||||||||| Sbjct: 151 ggcctcgccgccgcactcgg 132
>gb|DQ215303.1| Taeniopygia guttata clone 0058P0017E01 beta-globin mRNA-like mRNA, complete sequence Length = 614 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggcctcgccgccgcactcgg 107 |||||||||||||||||||| Sbjct: 154 ggcctcgccgccgcactcgg 135
>gb|DQ215301.1| Taeniopygia guttata clone 0058P0010F05 beta-globin mRNA-like mRNA, complete sequence Length = 614 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggcctcgccgccgcactcgg 107 |||||||||||||||||||| Sbjct: 154 ggcctcgccgccgcactcgg 135
>gb|DQ215300.1| Taeniopygia guttata clone 0058P0011A03 beta-globin mRNA-like mRNA, complete sequence Length = 610 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggcctcgccgccgcactcgg 107 |||||||||||||||||||| Sbjct: 151 ggcctcgccgccgcactcgg 132
>gb|DQ215299.1| Taeniopygia guttata clone 0058P0003F07 beta-globin mRNA-like mRNA, complete sequence Length = 621 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggcctcgccgccgcactcgg 107 |||||||||||||||||||| Sbjct: 154 ggcctcgccgccgcactcgg 135
>gb|DQ215298.1| Taeniopygia guttata clone 0058P0016A08 beta-globin mRNA-like mRNA, complete sequence Length = 614 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggcctcgccgccgcactcgg 107 |||||||||||||||||||| Sbjct: 154 ggcctcgccgccgcactcgg 135
>gb|DQ215297.1| Taeniopygia guttata clone 0058P0009G07 beta-globin mRNA-like mRNA, complete sequence Length = 613 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggcctcgccgccgcactcgg 107 |||||||||||||||||||| Sbjct: 154 ggcctcgccgccgcactcgg 135
>gb|DQ215296.1| Taeniopygia guttata clone 0058P0014B08 beta-globin mRNA-like mRNA, complete sequence Length = 627 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggcctcgccgccgcactcgg 107 |||||||||||||||||||| Sbjct: 153 ggcctcgccgccgcactcgg 134
>gb|DQ215295.1| Taeniopygia guttata clone 0058P0030D10 beta-globin mRNA-like mRNA, complete sequence Length = 614 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggcctcgccgccgcactcgg 107 |||||||||||||||||||| Sbjct: 154 ggcctcgccgccgcactcgg 135
>gb|DQ215294.1| Taeniopygia guttata clone 0058P0009E07 beta-globin mRNA-like mRNA, complete sequence Length = 613 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 88 ggcctcgccgccgcactcgg 107 |||||||||||||||||||| Sbjct: 154 ggcctcgccgccgcactcgg 135
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 ggcggagctgccggagggca 385 |||||||||||||||||||| Sbjct: 6358712 ggcggagctgccggagggca 6358693
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 gccctcggcgtcggcgacga 233 |||||||||||||||||||| Sbjct: 2169020 gccctcggcgtcggcgacga 2169039
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 92 tcgccgccgcactcgggctacacaggaa 119 |||||||||||| |||||||| |||||| Sbjct: 2415084 tcgccgccgcacgcgggctacccaggaa 2415111
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ctggcggcggagctgccgga 380 |||||||||||||||||||| Sbjct: 3980714 ctggcggcggagctgccgga 3980733
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ctggcggcggagctgccgga 380 |||||||||||||||||||| Sbjct: 3806904 ctggcggcggagctgccgga 3806923
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ctggcggcggagctgccgga 380 |||||||||||||||||||| Sbjct: 3552112 ctggcggcggagctgccgga 3552131
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 75 cgccgggctcgctggcctcg 94 |||||||||||||||||||| Sbjct: 1261992 cgccgggctcgctggcctcg 1261973
>gb|AF293355.2| Streptomyces collinus DSM2012 rubrinomycin gene cluster, complete sequence Length = 32634 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 gacgccctcggcgtcggcga 230 |||||||||||||||||||| Sbjct: 18006 gacgccctcggcgtcggcga 17987
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 gctgctgcaggtcctggcgg 367 |||||||||||||||||||| Sbjct: 4899297 gctgctgcaggtcctggcgg 4899278
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 ctggcggcggagctgccgga 380 |||||||||||||||||||| Sbjct: 4086326 ctggcggcggagctgccgga 4086307
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 gcatgcatcggcaagaggagtccg 52 |||||||||| ||||||||||||| Sbjct: 327914 gcatgcatcgtcaagaggagtccg 327891
>ref|NM_166213.2| Drosophila melanogaster fat-spondin CG6953-RB, transcript variant B (fat-spondin), mRNA Length = 2752 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 gatcaggaagctccacctgc 253 |||||||||||||||||||| Sbjct: 2094 gatcaggaagctccacctgc 2075
>ref|NM_058087.4| Drosophila melanogaster fat-spondin CG6953-RA, transcript variant A (fat-spondin), mRNA Length = 2480 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 gatcaggaagctccacctgc 253 |||||||||||||||||||| Sbjct: 1822 gatcaggaagctccacctgc 1803
>gb|AY060990.1| Drosophila melanogaster HL01082 full length cDNA Length = 1786 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 gatcaggaagctccacctgc 253 |||||||||||||||||||| Sbjct: 1116 gatcaggaagctccacctgc 1097
>gb|AC099032.1| Drosophila melanogaster, chromosome 2R, region 53F-54A, BAC clone BACR32P08, complete sequence Length = 163072 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 gatcaggaagctccacctgc 253 |||||||||||||||||||| Sbjct: 66140 gatcaggaagctccacctgc 66121
>emb|AJ748745.1| Haloferax volcanii lhr gene for putative helicase Lhr Length = 4004 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 acgccctcggcgtcggcgacgaga 235 |||||| ||||||||||||||||| Sbjct: 3330 acgcccgcggcgtcggcgacgaga 3307
>gb|AC018682.4| Homo sapiens BAC clone RP11-417F21 from 2, complete sequence Length = 181405 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 cgctggacgccctcggcgtc 225 |||||||||||||||||||| Sbjct: 151354 cgctggacgccctcggcgtc 151335
>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome Length = 4599354 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 ctggcggcggagctgccgga 380 |||||||||||||||||||| Sbjct: 4247356 ctggcggcggagctgccgga 4247337
>gb|AF245690.1|AF245690 Streptomyces verticillus putative N-acetyl-glucosamine transferase gene, partial cds; and putative N-acetyl-glucosamine 2-epimerase and hypothetical protein genes, complete cds Length = 5222 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 cgacgagcacggcgacggcg 437 |||||||||||||||||||| Sbjct: 3013 cgacgagcacggcgacggcg 2994
>gb|AE005084.1| Halobacterium sp. NRC-1 section 115 of 170 of the complete genome Length = 11691 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 gggcgtcggggttcgccttc 180 |||||||||||||||||||| Sbjct: 876 gggcgtcggggttcgccttc 857
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 tcggcgtcggcgacgagatc 237 |||||||||||||||||||| Sbjct: 2569132 tcggcgtcggcgacgagatc 2569151
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 gcgcgacgtgctgctgcagg 358 |||||||||||||||||||| Sbjct: 4076620 gcgcgacgtgctgctgcagg 4076601
>gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal region from 67.4 to 76.0 minutes Length = 372438 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ctggcggcggagctgccgga 380 |||||||||||||||||||| Sbjct: 334829 ctggcggcggagctgccgga 334848
>gb|AF135119.1|AF135119 Drosophila melanogaster fat-spondin mRNA, complete cds Length = 2466 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 gatcaggaagctccacctgc 253 |||||||||||||||||||| Sbjct: 1796 gatcaggaagctccacctgc 1777
>gb|AE003804.4| Drosophila melanogaster chromosome 2R, section 46 of 73 of the complete sequence Length = 260337 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 gatcaggaagctccacctgc 253 |||||||||||||||||||| Sbjct: 53432 gatcaggaagctccacctgc 53413
>gb|AC005717.2|AC005717 Drosophila melanogaster, chromosome 2R, region 53E6-53F4, P1 clone DS00078, complete sequence Length = 51289 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 gatcaggaagctccacctgc 253 |||||||||||||||||||| Sbjct: 26438 gatcaggaagctccacctgc 26457
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 cgccctcggcgtcggcgacg 232 |||||||||||||||||||| Sbjct: 2099062 cgccctcggcgtcggcgacg 2099081
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ctggcggcggagctgccgga 380 |||||||||||||||||||| Sbjct: 4333420 ctggcggcggagctgccgga 4333439
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ctggcggcggagctgccgga 380 |||||||||||||||||||| Sbjct: 4266198 ctggcggcggagctgccgga 4266217
>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome Length = 4369232 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 ctggcggcggagctgccgga 380 |||||||||||||||||||| Sbjct: 3385378 ctggcggcggagctgccgga 3385359
>gb|M13585.1|ECOMALT E.coli malT gene encoding the malT protein, complete cds Length = 3508 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ctggcggcggagctgccgga 380 |||||||||||||||||||| Sbjct: 1188 ctggcggcggagctgccgga 1207
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ctggcggcggagctgccgga 380 |||||||||||||||||||| Sbjct: 3396878 ctggcggcggagctgccgga 3396897
>gb|CP000038.1| Shigella sonnei Ss046, complete genome Length = 4825265 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 ctggcggcggagctgccgga 380 |||||||||||||||||||| Sbjct: 3717476 ctggcggcggagctgccgga 3717495 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,156,264 Number of Sequences: 3902068 Number of extensions: 3156264 Number of successful extensions: 73188 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70854 Number of HSP's gapped (non-prelim): 2334 length of query: 460 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 438 effective length of database: 17,147,199,772 effective search space: 7510473500136 effective search space used: 7510473500136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
