Clone Information

BLAST Search Result

Clone Name	baet102e03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RSSA_SOYBN (O22518) 40S ribosomal protein SA (p40)	190	2e-48
2	RSSAB_ARATH (Q8H173) 40S ribosomal protein SA-2 (p40 protein hom...	183	2e-46
3	RSSAA_ARATH (Q08682) 40S ribosomal protein SA-1 (p40) (Laminin r...	183	2e-46
4	RSSA_DAUCA (O80377) 40S ribosomal protein SA (p40)	182	3e-46
5	RSSA_BRANA (Q9ZSR8) 40S ribosomal protein SA (p40) (Laminin rece...	182	5e-46
6	RSSA_CICAR (O65751) 40S ribosomal protein SA (p40)	181	9e-46
7	RSSA_DROME (P38979) 40S ribosomal protein SA (p40) (Stubarista p...	141	8e-34
8	RSSA_TRIGR (P38980) 40S ribosomal protein SA (p40) (34/67 kDa la...	139	4e-33
9	RS0B_SCHPO (Q9P546) 40S ribosomal protein S0-B	135	6e-32
10	RSSA_URECA (P38981) 40S ribosomal protein SA (p40) (34/67 kDa la...	135	6e-32
11	RSSA_CHICK (P50890) 40S ribosomal protein SA (p40) (34/67 kDa la...	133	3e-31
12	RSSA_RAT (P38983) 40S ribosomal protein SA (p40) (34/67 kDa lami...	133	3e-31
13	RS0A_SCHPO (Q9Y7L8) 40S ribosomal protein S0-A	131	8e-31
14	RSSA_MOUSE (P14206) 40S ribosomal protein SA (p40) (34/67 kDa la...	131	8e-31
15	RSSA_HUMAN (P08865) 40S ribosomal protein SA (p40) (34/67 kDa la...	130	1e-30
16	RSSA_CRIGR (P38982) 40S ribosomal protein SA (p40) (34/67 kDa la...	130	1e-30
17	RSSA_BOVIN (P26452) 40S ribosomal protein SA (p40) (C10 protein)	130	1e-30
18	RSSA_CHLVR (P38984) 40S ribosomal protein SA (p40) (33 kDa lamin...	126	3e-29
19	RSSA_CAEEL (P46769) Probable 40S ribosomal protein SA (p40)	125	5e-29
20	RS0_NEUCR (Q01291) 40S ribosomal protein S0 (Ribosome-associated...	124	1e-28
21	RS0_PNECA (Q01661) 40S ribosomal protein S0 (Extracellular matri...	122	7e-28
22	RSSA_ECHGR (P46770) 40S ribosomal protein SA (p40) (Laminin-bind...	120	3e-27
23	RS0B_YEAST (P46654) 40S ribosomal protein S0-B (Nucleic acid-bin...	120	3e-27
24	RS0A_YEAST (P32905) 40S ribosomal protein S0-A (Nucleic acid-bin...	118	7e-27
25	RS0_CANAL (O42817) 40S ribosomal protein S0	116	4e-26
26	RS2_SULSO (P95993) 30S ribosomal protein S2P	79	5e-15
27	RS2_PYRHO (O59295) 30S ribosomal protein S2P	79	8e-15
28	RS2_PYRFU (Q8U0F0) 30S ribosomal protein S2P	79	8e-15
29	RS2_PYRAB (Q9V191) 30S ribosomal protein S2P	77	2e-14
30	RS2_PYRKO (Q5JJD2) 30S ribosomal protein S2P	77	2e-14
31	RS2_METKA (Q8TV23) 30S ribosomal protein S2P	76	5e-14
32	RS2_METTH (O26150) 30S ribosomal protein S2P	75	9e-14
33	RS2_THEAC (P57712) 30S ribosomal protein S2P	74	2e-13
34	RS2_METJA (P54109) 30S ribosomal protein S2P	72	6e-13
35	RS2_HALSA (P57713) 30S ribosomal protein S2P	70	3e-12
36	RS2_THEVO (Q97BQ4) 30S ribosomal protein S2P	70	4e-12
37	RS2_SULTO (Q96YW5) 30S ribosomal protein S2P	70	4e-12
38	RS2_METMA (Q8PW41) 30S ribosomal protein S2P	68	1e-11
39	RS2_METAC (Q8TT39) 30S ribosomal protein S2P	67	3e-11
40	RS2_SULAC (P39478) 30S ribosomal protein S2P	66	6e-11
41	RS2_HALMA (P29202) 30S ribosomal protein S2P (HS2) (ORFMSG)	65	7e-11
42	RS2_ARCFU (O29132) 30S ribosomal protein S2P	62	6e-10
43	RS2_PICTO (Q6L1Q0) 30S ribosomal protein S2P	58	1e-08
44	RS2_AERPE (Q9YB45) 30S ribosomal protein S2P	51	2e-06
45	RSSA_STRPU (P46771) 40S ribosomal protein SA (p40) (34/67 kDa la...	47	3e-05
46	RT04_YEAST (P32902) Mitochondrial 40S ribosomal protein MRP4	34	0.18
47	RS2_THETN (Q8RA21) 30S ribosomal protein S2	34	0.18
48	ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P...	33	0.40
49	ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P...	33	0.40
50	RS2_CHLPN (Q9Z7K9) 30S ribosomal protein S2	33	0.40
51	ZCHC2_MOUSE (Q69ZB8) Zinc finger CCHC domain-containing protein ...	32	1.2
52	RS2_CHLCV (Q824U3) 30S ribosomal protein S2	31	1.5
53	CSKI2_HUMAN (Q8WXE0) Caskin-2	31	1.5
54	ERYA2_SACER (Q03132) Erythronolide synthase, modules 3 and 4 (EC...	30	2.6
55	RS2_ONYPE (Q6YR51) 30S ribosomal protein S2	30	2.6
56	SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precurs...	30	2.6
57	SPL11_ORYSA (Q64HA9) Spotted leaf protein 11 (Spotted leaf11) (C...	30	3.4
58	YR229_MIMIV (Q5UQC4) Putative ankyrin repeat protein R229	30	3.4
59	VID21_YARLI (Q6C7K8) Chromatin modification-related protein VID21	30	4.4
60	FOXK1_MOUSE (P42128) Forkhead box protein K1 (Myocyte nuclear fa...	30	4.4
61	WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family mem...	30	4.4
62	CSKI2_MOUSE (Q8VHK1) Caskin-2	29	5.8
63	IF2_RHOPA (Q6NCN5) Translation initiation factor IF-2	29	5.8
64	RT02_ARATH (Q9GCB9) Mitochondrial ribosomal protein S2	29	7.6
65	BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)	29	7.6
66	WASF4_HUMAN (Q8IV90) Wiskott-Aldrich syndrome protein family mem...	29	7.6
67	UL51_PRVKA (Q85227) Protein UL51	29	7.6
68	ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (I...	29	7.6
69	ENA_DROME (Q8T4F7) Protein enabled	28	9.9
70	TAF4_HUMAN (O00268) Transcription initiation factor TFIID subuni...	28	9.9
71	LEU21_METJA (Q58409) 3-isopropylmalate dehydratase large subunit...	28	9.9
72	GCP60_MOUSE (Q8BMP6) Golgi resident protein GCP60 (Acyl-CoA-bind...	28	9.9

>RSSA_SOYBN (O22518) 40S ribosomal protein SA (p40)|
          Length = 310

 Score =  190 bits (482), Expect = 2e-48
 Identities = 92/100 (92%), Positives = 97/100 (97%)
 Frame = +2

Query: 188 RALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVI 367
           R LSQ+E DIQMMLAADVHLGTKNCDFQMERY++KRR DGIYIINLGKTWEKLQ+AARVI
Sbjct: 13  RQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQLAARVI 72

Query: 368 VAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           VAIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTP
Sbjct: 73  VAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTP 112

to top

>RSSAB_ARATH (Q8H173) 40S ribosomal protein SA-2 (p40 protein homolog)|
          Length = 280

 Score =  183 bits (465), Expect = 2e-46
 Identities = 91/110 (82%), Positives = 100/110 (90%), Gaps = 2/110 (1%)
 Frame = +2

Query: 164 MAAEGGGV--RALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTW 337
           MAA G     R +S++E DIQMML+ADVHLGTKNC++QMERYV+KRR DGIYIINLGKTW
Sbjct: 1   MAANGVATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTW 60

Query: 338 EKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           +KLQMAARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG NAIAGRHTP
Sbjct: 61  DKLQMAARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTP 110

to top

>RSSAA_ARATH (Q08682) 40S ribosomal protein SA-1 (p40) (Laminin receptor|
           homolog)
          Length = 298

 Score =  183 bits (465), Expect = 2e-46
 Identities = 91/109 (83%), Positives = 98/109 (89%), Gaps = 1/109 (0%)
 Frame = +2

Query: 164 MAAEGGGVRA-LSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWE 340
           MA  G    A LSQ+E D++MM AA+VHLGTKNC++QMERYV+KRR DGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 341 KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 109

to top

>RSSA_DAUCA (O80377) 40S ribosomal protein SA (p40)|
          Length = 297

 Score =  182 bits (463), Expect = 3e-46
 Identities = 89/102 (87%), Positives = 94/102 (92%)
 Frame = +2

Query: 182 GVRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAAR 361
           G R LS  E DIQMM AA+VHLGTKNCDFQMERYV+KRR DGIYIINLGKTWEKL +AAR
Sbjct: 4   GARELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLMLAAR 63

Query: 362 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           VIV+IENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTP
Sbjct: 64  VIVSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTP 105

to top

>RSSA_BRANA (Q9ZSR8) 40S ribosomal protein SA (p40) (Laminin receptor-like|
           protein)
          Length = 292

 Score =  182 bits (461), Expect = 5e-46
 Identities = 91/108 (84%), Positives = 97/108 (89%)
 Frame = +2

Query: 164 MAAEGGGVRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEK 343
           MAA G     LSQ+E DI+MM AA+VHLGTKNC++QMERYV+KRR DGIYI NLGKTWEK
Sbjct: 1   MAANGS--TQLSQKEADIKMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEK 58

Query: 344 LQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           L MAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP
Sbjct: 59  LMMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 106

to top

>RSSA_CICAR (O65751) 40S ribosomal protein SA (p40)|
          Length = 300

 Score =  181 bits (459), Expect = 9e-46
 Identities = 88/108 (81%), Positives = 97/108 (89%)
 Frame = +2

Query: 164 MAAEGGGVRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEK 343
           MA      R L+Q+E DIQMMLAADVHLGTKNC+FQMERY++KRR DGIYIINLGKTW+K
Sbjct: 1   MATTTAPSRQLTQKEADIQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDK 60

Query: 344 LQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           L +AAR+IVAIEN QDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTP
Sbjct: 61  LNLAARIIVAIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTP 108

to top

>RSSA_DROME (P38979) 40S ribosomal protein SA (p40) (Stubarista protein)|
           (Laminin receptor homolog) (K14)
          Length = 270

 Score =  141 bits (356), Expect = 8e-34
 Identities = 69/103 (66%), Positives = 81/103 (78%)
 Frame = +2

Query: 179 GGVRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAA 358
           GG+  LS +E DI  ML A  HLG++N +FQME+YVYKRR DG+ I+NLGKTWEKLQ+AA
Sbjct: 3   GGLDILSLKEDDITKMLVATTHLGSENVNFQMEQYVYKRRADGVNILNLGKTWEKLQLAA 62

Query: 359 RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           R IVAI+NP DI V S+RP GQRAVLKFA+YT    IAGR TP
Sbjct: 63  RAIVAIDNPSDIFVISSRPIGQRAVLKFAKYTDTTPIAGRFTP 105

to top

>RSSA_TRIGR (P38980) 40S ribosomal protein SA (p40) (34/67 kDa laminin-binding|
           protein)
          Length = 316

 Score =  139 bits (350), Expect = 4e-33
 Identities = 65/103 (63%), Positives = 81/103 (78%)
 Frame = +2

Query: 179 GGVRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAA 358
           GG+  L+ +E D+Q  LA+  H+G+ N D+QM +YVYKR+ DG YIINL +TWEKL MAA
Sbjct: 3   GGLDCLALKEDDVQKFLASGAHIGSSNLDYQMTQYVYKRKPDGTYIINLRRTWEKLLMAA 62

Query: 359 RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           R+IVAIENP D+ V S+RPYGQRAVLKF  +TGA  IAGR+TP
Sbjct: 63  RIIVAIENPADVCVISSRPYGQRAVLKFGAHTGATPIAGRYTP 105

to top

>RS0B_SCHPO (Q9P546) 40S ribosomal protein S0-B|
          Length = 287

 Score =  135 bits (340), Expect = 6e-32
 Identities = 65/98 (66%), Positives = 80/98 (81%)
 Frame = +2

Query: 194 LSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVA 373
           L+  + DI+ +LAAD H+G+KN + +ME YV+KRR+DGI+IINLGKTWEKL +AARVI  
Sbjct: 11  LNATDDDIKNLLAADSHIGSKNLEVRMENYVWKRRSDGIHIINLGKTWEKLVLAARVIAT 70

Query: 374 IENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           IENP D+ V S+RPYG RAVLKFA +TGA AIAGR TP
Sbjct: 71  IENPADVCVISSRPYGHRAVLKFAAHTGATAIAGRFTP 108

to top

>RSSA_URECA (P38981) 40S ribosomal protein SA (p40) (34/67 kDa laminin-binding|
           protein)
          Length = 317

 Score =  135 bits (340), Expect = 6e-32
 Identities = 67/103 (65%), Positives = 76/103 (73%)
 Frame = +2

Query: 179 GGVRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAA 358
           G +  L+ +E+D+   LA   HLG  N DFQME+YVYKRR DG  IIN+ KTWEK+ +AA
Sbjct: 3   GSIDTLALKEEDVTKFLACASHLGANNVDFQMEQYVYKRRPDGTSIINVRKTWEKVLLAA 62

Query: 359 RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           R I AIENP DI V SARPYGQRAVLKFA YTGA  IAGR TP
Sbjct: 63  RAIAAIENPADICVISARPYGQRAVLKFAHYTGATPIAGRFTP 105

to top

>RSSA_CHICK (P50890) 40S ribosomal protein SA (p40) (34/67 kDa laminin|
           receptor) (37LRP)
          Length = 296

 Score =  133 bits (334), Expect = 3e-31
 Identities = 66/103 (64%), Positives = 78/103 (75%)
 Frame = +2

Query: 179 GGVRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAA 358
           GG+  L  +E+D+   LAA  HLG  N DFQME+Y+YKR++DGIYIINL +TWEKL +AA
Sbjct: 3   GGLDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAA 62

Query: 359 RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           R IVAIENP D+ V S+R  GQRAVLKFA  TGA  IAGR TP
Sbjct: 63  RAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTP 105

to top

>RSSA_RAT (P38983) 40S ribosomal protein SA (p40) (34/67 kDa laminin|
           receptor)
          Length = 294

 Score =  133 bits (334), Expect = 3e-31
 Identities = 66/103 (64%), Positives = 78/103 (75%)
 Frame = +2

Query: 179 GGVRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAA 358
           GG+  L  +E+D+   LAA  HLG  N DFQME+Y+YKR++DGIYIINL +TWEKL +AA
Sbjct: 2   GGLDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAA 61

Query: 359 RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           R IVAIENP D+ V S+R  GQRAVLKFA  TGA  IAGR TP
Sbjct: 62  RAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTP 104

to top

>RS0A_SCHPO (Q9Y7L8) 40S ribosomal protein S0-A|
          Length = 292

 Score =  131 bits (330), Expect = 8e-31
 Identities = 62/106 (58%), Positives = 82/106 (77%)
 Frame = +2

Query: 170 AEGGGVRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQ 349
           A+ G    L+  ++DI+ +LAA+ H+G+KN + +M+ YV+KRR+DG++I+NLGKTWEKL 
Sbjct: 2   AQVGRPNILNATDEDIKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLV 61

Query: 350 MAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           +AARVI  IENP D+ V S R YG RAVLKFA +TGA AIAGR TP
Sbjct: 62  LAARVIATIENPADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTP 107

to top

>RSSA_MOUSE (P14206) 40S ribosomal protein SA (p40) (34/67 kDa laminin|
           receptor)
          Length = 294

 Score =  131 bits (330), Expect = 8e-31
 Identities = 65/103 (63%), Positives = 78/103 (75%)
 Frame = +2

Query: 179 GGVRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAA 358
           G +  L  +E+D+  +LAA  HLG  N DFQME+Y+YKR++DGIYIINL +TWEKL +AA
Sbjct: 2   GALDVLQMKEEDVLKLLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAA 61

Query: 359 RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           R IVAIENP D+ V S+R  GQRAVLKFA  TGA  IAGR TP
Sbjct: 62  RAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTP 104

to top

>RSSA_HUMAN (P08865) 40S ribosomal protein SA (p40) (34/67 kDa laminin|
           receptor) (Colon carcinoma laminin-binding protein)
           (NEM/1CHD4) (Multidrug resistance-associated protein
           MGr1-Ag)
          Length = 294

 Score =  130 bits (328), Expect = 1e-30
 Identities = 65/103 (63%), Positives = 77/103 (74%)
 Frame = +2

Query: 179 GGVRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAA 358
           G +  L  +E+D+   LAA  HLG  N DFQME+Y+YKR++DGIYIINL +TWEKL +AA
Sbjct: 2   GALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAA 61

Query: 359 RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           R IVAIENP D+ V S+R  GQRAVLKFA  TGA  IAGR TP
Sbjct: 62  RAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTP 104

to top

>RSSA_CRIGR (P38982) 40S ribosomal protein SA (p40) (34/67 kDa laminin|
           receptor)
          Length = 294

 Score =  130 bits (328), Expect = 1e-30
 Identities = 65/103 (63%), Positives = 77/103 (74%)
 Frame = +2

Query: 179 GGVRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAA 358
           G +  L  +E+D+   LAA  HLG  N DFQME+Y+YKR++DGIYIINL +TWEKL +AA
Sbjct: 2   GALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAA 61

Query: 359 RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           R IVAIENP D+ V S+R  GQRAVLKFA  TGA  IAGR TP
Sbjct: 62  RAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTP 104

to top

>RSSA_BOVIN (P26452) 40S ribosomal protein SA (p40) (C10 protein)|
          Length = 294

 Score =  130 bits (328), Expect = 1e-30
 Identities = 65/103 (63%), Positives = 77/103 (74%)
 Frame = +2

Query: 179 GGVRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAA 358
           G +  L  +E+D+   LAA  HLG  N DFQME+Y+YKR++DGIYIINL +TWEKL +AA
Sbjct: 2   GALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLLAA 61

Query: 359 RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           R IVAIENP D+ V S+R  GQRAVLKFA  TGA  IAGR TP
Sbjct: 62  RAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTP 104

to top

>RSSA_CHLVR (P38984) 40S ribosomal protein SA (p40) (33 kDa laminin-binding|
           protein)
          Length = 293

 Score =  126 bits (317), Expect = 3e-29
 Identities = 63/102 (61%), Positives = 78/102 (76%)
 Frame = +2

Query: 182 GVRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAAR 361
           G+ ALS +E+D+   LAA VHLG+ N     + YV+KR++DGI+IINL KTWEKL +AAR
Sbjct: 4   GIDALSLKEEDVVKFLAAGVHLGSTNVGSSCQGYVFKRKSDGIHIINLRKTWEKLILAAR 63

Query: 362 VIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           +I +IENP D+ V S+RPYG RAVLKFAQ TGA  IAGR TP
Sbjct: 64  IIASIENPADVCVISSRPYGTRAVLKFAQSTGAIPIAGRFTP 105

to top

>RSSA_CAEEL (P46769) Probable 40S ribosomal protein SA (p40)|
          Length = 275

 Score =  125 bits (315), Expect = 5e-29
 Identities = 60/103 (58%), Positives = 76/103 (73%)
 Frame = +2

Query: 179 GGVRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAA 358
           GG    +  E+D+  +LA   HLG+ N +FQM++YVYKRR DG  IIN+ KTWEKL +AA
Sbjct: 2   GGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLLAA 61

Query: 359 RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           R I A+ENP D++V SARPY QRA+LKFA +TGA AI GR +P
Sbjct: 62  RAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSP 104

to top

>RS0_NEUCR (Q01291) 40S ribosomal protein S0 (Ribosome-associated protein 1)|
          Length = 290

 Score =  124 bits (311), Expect = 1e-28
 Identities = 58/92 (63%), Positives = 73/92 (79%)
 Frame = +2

Query: 212 DIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQD 391
           DI+ +LAA  H+G+KN    M+ Y++K R DG+ I+N+GKTWEK+ +AAR+I AI+NP D
Sbjct: 16  DIEQLLAAQCHIGSKNLGVHMQPYLWKTRADGVNILNVGKTWEKIVLAARIIAAIDNPAD 75

Query: 392 IIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           I V SARPYGQRAVLKFA +TGA AIAGR TP
Sbjct: 76  ICVISARPYGQRAVLKFAAHTGAQAIAGRFTP 107

to top

>RS0_PNECA (Q01661) 40S ribosomal protein S0 (Extracellular matrix receptor|
           protein)
          Length = 295

 Score =  122 bits (305), Expect = 7e-28
 Identities = 58/98 (59%), Positives = 78/98 (79%), Gaps = 1/98 (1%)
 Frame = +2

Query: 197 SQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAI 376
           +Q   DI+M+++A+ H+G++NC+ +ME YV+KRR DG++IINLGK WEKL +AAR+IV I
Sbjct: 6   AQPAADIEMLISANCHIGSRNCELRMEPYVFKRRADGVHIINLGKRWEKLILAARIIVTI 65

Query: 377 ENPQDIIVQSARPYGQRAVLKFAQYTGA-NAIAGRHTP 487
           ENP DII  S+R YGQRAV K+A +TGA  AI+ R TP
Sbjct: 66  ENPTDIIAVSSRSYGQRAVHKYALHTGAREAISSRFTP 103

to top

>RSSA_ECHGR (P46770) 40S ribosomal protein SA (p40) (Laminin-binding protein)|
          Length = 268

 Score =  120 bits (300), Expect = 3e-27
 Identities = 54/103 (52%), Positives = 74/103 (71%)
 Frame = +2

Query: 179 GGVRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAA 358
           GG+ AL  +E DI++M+AA VHLG+ N ++QM++YVY R  +G +II+L KTWEKL +AA
Sbjct: 3   GGIEALELKEDDIRLMVAAKVHLGSTNANYQMQQYVYDRNDEGNHIIHLNKTWEKLLLAA 62

Query: 359 RVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           R I AIENP D+++   +P  QR  LKF  YTG  ++ GR TP
Sbjct: 63  RAICAIENPADVVIIGGQPTWQRGALKFGHYTGTTSVPGRFTP 105

to top

>RS0B_YEAST (P46654) 40S ribosomal protein S0-B (Nucleic acid-binding protein|
           NAB1B)
          Length = 251

 Score =  120 bits (300), Expect = 3e-27
 Identities = 54/93 (58%), Positives = 71/93 (76%)
 Frame = +2

Query: 209 QDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQ 388
           +D Q++LAA+ HLG +N     E YV+  R DG+++IN+GKTWEKL +AAR+I AI NP+
Sbjct: 11  EDAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPE 70

Query: 389 DIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           D++  S+R YGQRAVLKFA +TGA  IAGR TP
Sbjct: 71  DVVAISSRTYGQRAVLKFAAHTGATPIAGRFTP 103

to top

>RS0A_YEAST (P32905) 40S ribosomal protein S0-A (Nucleic acid-binding protein|
           NAB1A)
          Length = 251

 Score =  118 bits (296), Expect = 7e-27
 Identities = 53/93 (56%), Positives = 71/93 (76%)
 Frame = +2

Query: 209 QDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQ 388
           +D Q++LAA+ HLG +N     E YV+  R DG+++IN+GKTWEKL +AAR+I AI NP+
Sbjct: 11  EDAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIPNPE 70

Query: 389 DIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           D++  S+R +GQRAVLKFA +TGA  IAGR TP
Sbjct: 71  DVVAISSRTFGQRAVLKFAAHTGATPIAGRFTP 103

to top

>RS0_CANAL (O42817) 40S ribosomal protein S0|
          Length = 253

 Score =  116 bits (290), Expect = 4e-26
 Identities = 55/93 (59%), Positives = 71/93 (76%)
 Frame = +2

Query: 209 QDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQ 388
           +D +++LAA+VHLG KN     + YVYK R DG+ IIN+GKTWEK+ +AAR+I A+ N  
Sbjct: 12  EDAKLLLAANVHLGAKNVQVHNKPYVYKTRPDGMNIINIGKTWEKIVLAARIIAAVPNAS 71

Query: 389 DIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           D+ V S+R +GQRAVLKFA +TGA AIAGR TP
Sbjct: 72  DVAVCSSRTFGQRAVLKFAAHTGATAIAGRFTP 104

to top

>RS2_SULSO (P95993) 30S ribosomal protein S2P|
          Length = 231

 Score = 79.3 bits (194), Expect = 5e-15
 Identities = 38/91 (41%), Positives = 61/91 (67%)
 Frame = +2

Query: 215 IQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQDI 394
           +   L+A VH+GT +C   ME +VY+ R +G+Y++++ K  E+L++AA+ +   + PQDI
Sbjct: 39  VDTYLSAGVHIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSRYD-PQDI 97

Query: 395 IVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           IV ++RPY  R V KFA+  G+ A+ GR  P
Sbjct: 98  IVVASRPYAYRPVQKFAEVVGSRALVGRIIP 128

to top

>RS2_PYRHO (O59295) 30S ribosomal protein S2P|
          Length = 202

 Score = 78.6 bits (192), Expect = 8e-15
 Identities = 38/91 (41%), Positives = 59/91 (64%)
 Frame = +2

Query: 215 IQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQDI 394
           +   LAA VH+GT+     M++++Y+ R DG+Y++++ KT E+L++A + +   E PQ I
Sbjct: 9   LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFE-PQSI 67

Query: 395 IVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           +  S R YGQ+ V KF + TGA AI GR  P
Sbjct: 68  LAVSVRLYGQKPVKKFGEVTGARAIPGRFLP 98

to top

>RS2_PYRFU (Q8U0F0) 30S ribosomal protein S2P|
          Length = 202

 Score = 78.6 bits (192), Expect = 8e-15
 Identities = 38/91 (41%), Positives = 59/91 (64%)
 Frame = +2

Query: 215 IQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQDI 394
           +   LAA VH+GT+     M++++Y+ R DG+Y++++ KT E+L++A + +   E PQ I
Sbjct: 9   LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLAKFE-PQSI 67

Query: 395 IVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           +  S R YGQ+ V KF + TGA AI GR  P
Sbjct: 68  LAVSVRLYGQKPVKKFGEVTGARAIPGRFLP 98

to top

>RS2_PYRAB (Q9V191) 30S ribosomal protein S2P|
          Length = 202

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 37/91 (40%), Positives = 59/91 (64%)
 Frame = +2

Query: 215 IQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQDI 394
           +   LAA VH+GT+     M++++Y+ R DG+Y++++ KT E+L++A + +   + PQ I
Sbjct: 9   LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLKVAGKFLARFD-PQSI 67

Query: 395 IVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           +  S R YGQ+ V KF + TGA AI GR  P
Sbjct: 68  LAVSVRLYGQKPVKKFGEVTGARAIPGRFLP 98

to top

>RS2_PYRKO (Q5JJD2) 30S ribosomal protein S2P|
          Length = 201

 Score = 77.4 bits (189), Expect = 2e-14
 Identities = 37/91 (40%), Positives = 59/91 (64%)
 Frame = +2

Query: 215 IQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQDI 394
           +   LAA VH+GT+     M++++Y+ R DG+Y++++ KT E+L++A + +   + P+ I
Sbjct: 8   LDQYLAAGVHIGTQQKTKDMKKFIYRVRQDGLYVLDVRKTDERLRVAGKFLAKFD-PESI 66

Query: 395 IVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           +  S R YGQR V KF + TGA AI GR  P
Sbjct: 67  LAVSVRLYGQRPVKKFGEVTGAKAIPGRFLP 97

to top

>RS2_METKA (Q8TV23) 30S ribosomal protein S2P|
          Length = 203

 Score = 75.9 bits (185), Expect = 5e-14
 Identities = 38/87 (43%), Positives = 59/87 (67%)
 Frame = +2

Query: 227 LAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQS 406
           LAA VH+GT+     ME ++Y+ R DG+++I++ KT E++++AA   +++ N  +I+V S
Sbjct: 15  LAAGVHIGTQQKTKDMEPFIYRTRADGLHVIDVRKTDERIRIAAN-FLSMYNTDEILVVS 73

Query: 407 ARPYGQRAVLKFAQYTGANAIAGRHTP 487
            R YGQ+ V KFA+ TG  AI GR  P
Sbjct: 74  RRYYGQKPVSKFAEATGTTAIPGRFVP 100

to top

>RS2_METTH (O26150) 30S ribosomal protein S2P|
          Length = 198

 Score = 75.1 bits (183), Expect = 9e-14
 Identities = 36/87 (41%), Positives = 56/87 (64%)
 Frame = +2

Query: 227 LAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQS 406
           LAA +H+GT+     ME+Y+Y+ R+DG+Y++++ KT +++  A++ +   E P DI+  S
Sbjct: 12  LAAGLHIGTQQKTADMEKYIYRVRSDGLYVLDIRKTNDRVIAASKFLSKYE-PDDILAVS 70

Query: 407 ARPYGQRAVLKFAQYTGANAIAGRHTP 487
            R YGQ  V KF + TGA  I GR  P
Sbjct: 71  TRQYGQEPVRKFGEVTGARTIPGRFIP 97

to top

>RS2_THEAC (P57712) 30S ribosomal protein S2P|
          Length = 199

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 38/83 (45%), Positives = 54/83 (65%)
 Frame = +2

Query: 239 VHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPY 418
           VH+GT+     M+ Y++K R DG+YI+++ KT  KL +A +++   E PQDI+V + R Y
Sbjct: 17  VHIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIVAGKMLARFE-PQDILVVAQRQY 75

Query: 419 GQRAVLKFAQYTGANAIAGRHTP 487
             R V KFA+ TGA AI GR  P
Sbjct: 76  AFRPVAKFAEVTGATAITGRFNP 98

to top

>RS2_METJA (P54109) 30S ribosomal protein S2P|
          Length = 222

 Score = 72.4 bits (176), Expect = 6e-13
 Identities = 33/87 (37%), Positives = 58/87 (66%)
 Frame = +2

Query: 227 LAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQS 406
           LA+ +H+GT+     ME+++Y+ R+DG+Y++++ KT E+L++AA+ +   E P+DI+  S
Sbjct: 14  LASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYE-PEDILAVS 72

Query: 407 ARPYGQRAVLKFAQYTGANAIAGRHTP 487
            R Y    + +F +YTG   +AGR  P
Sbjct: 73  RRIYTMGPLEEFGKYTGIRTVAGRFVP 99

to top

>RS2_HALSA (P57713) 30S ribosomal protein S2P|
          Length = 249

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 4/146 (2%)
 Frame = +2

Query: 62  PQPVATSPAATTRAFSSPPLSRARGSRPKP*PPTMAAEGGGVRALSQREQD----IQMML 229
           P   A    +T +     P + A     +P P + A E      +S  E D    ++  L
Sbjct: 17  PDEAAADAESTAQTDEQTPDTEA----DEPAPESTATED----VMSDEEADLLIPVEDYL 68

Query: 230 AADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSA 409
            A VH+GT+     M+R++++ RTDG+Y++++ +T ++++ AA   +A  +P+ I+V S+
Sbjct: 69  GAGVHIGTQQKTNDMDRFIHRVRTDGLYVLDVSRTDDRVRTAAD-FLANYDPEQILVTSS 127

Query: 410 RPYGQRAVLKFAQYTGANAIAGRHTP 487
           R YG+    KFA+  GA A  GR  P
Sbjct: 128 RQYGRFPAEKFAEAVGARARTGRFIP 153

to top

>RS2_THEVO (Q97BQ4) 30S ribosomal protein S2P|
          Length = 199

 Score = 69.7 bits (169), Expect = 4e-12
 Identities = 36/83 (43%), Positives = 53/83 (63%)
 Frame = +2

Query: 239 VHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPY 418
           VH+GT+     M+ Y++K R DG+YI+++ KT  KL  A +++   + PQDI+V + R Y
Sbjct: 17  VHIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIAAGKMLARFD-PQDILVVAQRQY 75

Query: 419 GQRAVLKFAQYTGANAIAGRHTP 487
             R V KFA+ TGA +I GR  P
Sbjct: 76  AFRPVAKFAEVTGAVSITGRFNP 98

to top

>RS2_SULTO (Q96YW5) 30S ribosomal protein S2P|
          Length = 225

 Score = 69.7 bits (169), Expect = 4e-12
 Identities = 34/87 (39%), Positives = 55/87 (63%)
 Frame = +2

Query: 227 LAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQS 406
           L+A VH+GT  C   ME++VY+ R +G+Y++++ K  E+L++AAR +     P++I+  +
Sbjct: 37  LSAGVHIGTHTCTKYMEKFVYRVRPEGLYVLDVRKIDERLRIAARFLSRF-TPENILAVT 95

Query: 407 ARPYGQRAVLKFAQYTGANAIAGRHTP 487
           +RPY    V KFA+     AI GR  P
Sbjct: 96  SRPYAFTPVTKFAEVIRGRAIVGRFPP 122

to top

>RS2_METMA (Q8PW41) 30S ribosomal protein S2P|
          Length = 224

 Score = 67.8 bits (164), Expect = 1e-11
 Identities = 37/110 (33%), Positives = 62/110 (56%)
 Frame = +2

Query: 158 PTMAAEGGGVRALSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTW 337
           P    E    +  S     I   LAA VH+GT+     M R+VY+ RTDG+Y++++  T 
Sbjct: 20  PVADDEAASAKEGSTSLVSIDEYLAAGVHIGTQQKTQDMMRFVYRVRTDGLYVLDIQSTD 79

Query: 338 EKLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           E++++A++ +++  +P  I+V S+R YGQ     F++  G  A+ GR  P
Sbjct: 80  ERIRVASK-LLSHYDPSRILVVSSRQYGQHPARMFSRALGTRAMLGRFIP 128

to top

>RS2_METAC (Q8TT39) 30S ribosomal protein S2P|
          Length = 225

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 34/91 (37%), Positives = 58/91 (63%)
 Frame = +2

Query: 215 IQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQDI 394
           I   LAA VH+GT+     M R+VY+ RTDG+Y++++  T E++++A++ +++  +P  I
Sbjct: 40  IDEYLAAGVHIGTQQKTQDMMRFVYRVRTDGLYVLDIQSTDERIRVASK-LLSHYDPARI 98

Query: 395 IVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           +V S+R YGQ     F++  G  A+ GR  P
Sbjct: 99  LVVSSRQYGQHPARMFSRALGTRAMLGRFIP 129

to top

>RS2_SULAC (P39478) 30S ribosomal protein S2P|
          Length = 225

 Score = 65.9 bits (159), Expect = 6e-11
 Identities = 31/87 (35%), Positives = 54/87 (62%)
 Frame = +2

Query: 227 LAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQS 406
           L+A VH+GT  C   MER++Y+ R +G+Y++++ K  E+L++AA+ I     P+ ++  +
Sbjct: 37  LSAGVHIGTHTCTRYMERFIYRVRPEGLYVLDVRKIDERLRVAAKFISRF-RPEAVLTVA 95

Query: 407 ARPYGQRAVLKFAQYTGANAIAGRHTP 487
           +RPY    V KF++      I+GR  P
Sbjct: 96  SRPYAFTPVQKFSEVVRGKEISGRFPP 122

to top

>RS2_HALMA (P29202) 30S ribosomal protein S2P (HS2) (ORFMSG)|
          Length = 267

 Score = 65.5 bits (158), Expect = 7e-11
 Identities = 33/91 (36%), Positives = 55/91 (60%)
 Frame = +2

Query: 215 IQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQDI 394
           ++  L A VH+GT+     MER++++ RTDG+Y++++  T E+++ AA  +   E P+ I
Sbjct: 82  VEDYLGAGVHIGTQQKTQDMERFIHRVRTDGLYVLDVSMTDERIRTAADFLSNYE-PEQI 140

Query: 395 IVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           +  S+R YG+    KFA+  GA    GR  P
Sbjct: 141 LAASSRQYGRFPAEKFAEAIGARVRTGRFIP 171

to top

>RS2_ARCFU (O29132) 30S ribosomal protein S2P|
          Length = 197

 Score = 62.4 bits (150), Expect = 6e-10
 Identities = 30/87 (34%), Positives = 56/87 (64%)
 Frame = +2

Query: 227 LAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQS 406
           LAA VH+GT+     M+++++K R DG+Y++++ K  E++++AA+ +   E P  I++ +
Sbjct: 16  LAAGVHIGTQIKTGDMKKFIFKVRQDGLYVLDIRKLDERIRVAAKFLSRYE-PSKILLVA 74

Query: 407 ARPYGQRAVLKFAQYTGANAIAGRHTP 487
           AR Y  + V  F++  G++ I GR  P
Sbjct: 75  ARQYAHKPVQMFSKVVGSDYIVGRFIP 101

to top

>RS2_PICTO (Q6L1Q0) 30S ribosomal protein S2P|
          Length = 200

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 29/83 (34%), Positives = 50/83 (60%)
 Frame = +2

Query: 239 VHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSARPY 418
           +H+GT+     M+ Y++K R DG+YI+++ KT   L +A +++ A   P+ I+  + R Y
Sbjct: 18  IHIGTQIKSKDMDPYIFKIRNDGLYILDIRKTNHALIIAGKML-ARYRPEQILAVAQRQY 76

Query: 419 GQRAVLKFAQYTGANAIAGRHTP 487
             R V KF++  G+ +I GR  P
Sbjct: 77  AFRPVSKFSEVVGSKSIIGRFIP 99

to top

>RS2_AERPE (Q9YB45) 30S ribosomal protein S2P|
          Length = 205

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 31/85 (36%), Positives = 45/85 (52%)
 Frame = +2

Query: 233 ADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQDIIVQSAR 412
           A V  GT+ C   M ++V++   +G Y ++  K  E+L MAA+ +   E P+ I V S R
Sbjct: 18  AGVIYGTQICTRYMRQFVHRILPEGYYQLDYLKIDERLAMAAKFLSTFE-PEKIAVVSVR 76

Query: 413 PYGQRAVLKFAQYTGANAIAGRHTP 487
            YGQ+ V    +  G  AI GR  P
Sbjct: 77  IYGQKPVRMMCERVGCKAITGRIIP 101

to top

>RSSA_STRPU (P46771) 40S ribosomal protein SA (p40) (34/67 kDa laminin-binding|
           protein) (Fragment)
          Length = 264

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = +2

Query: 404 SARPYGQRAVLKFAQYTGANAIAGRHTP 487
           S+RPYGQRAVLKF  +TGA  +AGR+TP
Sbjct: 1   SSRPYGQRAVLKFGAHTGATPVAGRYTP 28

to top

>RT04_YEAST (P32902) Mitochondrial 40S ribosomal protein MRP4|
          Length = 394

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
 Frame = +2

Query: 215 IQMMLAADVHLGTKNCDFQM--ERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAIENPQ 388
           ++ +++A VHLG     ++   + Y+Y     GI+II+L +T   L+ AA+V+  +    
Sbjct: 185 VESLMSAGVHLGQSTSLWRSSTQSYIYGEYK-GIHIIDLNQTLSYLKRAAKVVEGVSESG 243

Query: 389 DIIVQSARPYGQRAVLKFA 445
            II+      GQ+  L+ A
Sbjct: 244 GIILFLGTRQGQKRGLEEA 262

to top

>RS2_THETN (Q8RA21) 30S ribosomal protein S2|
          Length = 235

 Score = 34.3 bits (77), Expect = 0.18
 Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
 Frame = +2

Query: 215 IQMMLAADVHLG--TKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMA 355
           ++ +L A VH G  T+  + +M  Y++  R +GIYII+L +T EKL+ A
Sbjct: 6   MKQLLEAGVHFGHQTRRWNPKMAPYIFTER-NGIYIIDLQQTVEKLEQA 53

to top

>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)|
           (IER 2.9/ER2.6)
          Length = 676

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = +2

Query: 11  RARVLSHTRASPYK*SRPQPVATSPAATTRAFSSPPLSRARGSRPKP*PPT--MAAEGGG 184
           R  V +  R +P     P+ +A  P     A S+PP SR+RG R  P  P    AA    
Sbjct: 349 RQYVSTRGRQTPAVQPAPRSLARRPCGRAAAVSAPPSSRSRGGRRDPRLPAAPRAAPAAQ 408

Query: 185 VRALSQREQD 214
            RA S   ++
Sbjct: 409 ARACSPEPRE 418

to top

>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)|
           (IER 2.9/ER2.6)
          Length = 676

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
 Frame = +2

Query: 11  RARVLSHTRASPYK*SRPQPVATSPAATTRAFSSPPLSRARGSRPKP*PPT--MAAEGGG 184
           R  V +  R +P     P+ +A  P     A S+PP SR+RG R  P  P    AA    
Sbjct: 349 RQYVSTRGRQTPAVQPAPRSLARRPCGRAAAVSAPPSSRSRGGRRDPRLPAAPRAAPAAQ 408

Query: 185 VRALSQREQD 214
            RA S   ++
Sbjct: 409 ARACSPEPRE 418

to top

>RS2_CHLPN (Q9Z7K9) 30S ribosomal protein S2|
          Length = 277

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 17/49 (34%), Positives = 34/49 (69%), Gaps = 2/49 (4%)
 Frame = +2

Query: 215 IQMMLAADVHLG--TKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMA 355
           I+ +++A  H G  T+  + +M+ Y+++ + +G+YIINL KT ++L+ A
Sbjct: 10  IKDLMSAGAHFGHQTRRWNPKMKLYIFEEK-NGLYIINLAKTLQQLRNA 57

to top

>ZCHC2_MOUSE (Q69ZB8) Zinc finger CCHC domain-containing protein 2 (Fragment)|
          Length = 1168

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/41 (43%), Positives = 19/41 (46%)
 Frame = +2

Query: 56  SRPQPVATSPAATTRAFSSPPLSRARGSRPKP*PPTMAAEG 178
           S P P A  P A  R  +  PL R R  RP P PPT    G
Sbjct: 16  SEPPPDAEEPEADARPGAKAPLRRRRDCRPPP-PPTGLPRG 55

to top

>RS2_CHLCV (Q824U3) 30S ribosomal protein S2|
          Length = 276

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
 Frame = +2

Query: 215 IQMMLAADVHLG--TKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMA-ARVIVAIENP 385
           ++ ++ A  H G  T+  + +M+ Y+++ + +G+YIINL KT  +L+ A   V   I+  
Sbjct: 11  VKDLMEAGAHFGHQTRRWNPKMKLYIFEEK-NGLYIINLAKTLYQLRNALPHVCKVIKEN 69

Query: 386 QDIIVQSARPYGQRAVLKFAQYTGANAIAGR 478
           + I+    +   +  + + A   G   +A R
Sbjct: 70  KPILFVGTKKQAKCVIKEAAIEAGEYFVAER 100

to top

>CSKI2_HUMAN (Q8WXE0) Caskin-2|
          Length = 1202

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 23/66 (34%), Positives = 29/66 (43%)
 Frame = +2

Query: 62   PQPVATSPAATTRAFSSPPLSRARGSRPKP*PPTMAAEGGGVRALSQREQDIQMMLAADV 241
            P+PV  S A T  AFS P L+   G RP P P   +    G     QR +     LAA +
Sbjct: 1102 PKPV--SVACTQLAFSGPKLAPRLGPRPVPPPRPESTGTVGPGQAQQRLEQTSSSLAAAL 1159

Query: 242  HLGTKN 259
                K+
Sbjct: 1160 RAAEKS 1165

to top

>ERYA2_SACER (Q03132) Erythronolide synthase, modules 3 and 4 (EC 2.3.1.94) (ORF|
            2) (6-deoxyerythronolide B synthase II) (DEBS 2)
          Length = 3566

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 21/58 (36%), Positives = 28/58 (48%)
 Frame = -1

Query: 361  PCGHLKLLPGLAKVDNVNTVSAALVDVALHLEIAVLGAEVDVGGEHHLDVLLALGQRP 188
            P G  +L+PG   +D+V    A   DV   L    +  +V   G +  DVLLALG  P
Sbjct: 2819 PAGTQRLVPGDGAIDSVAFEPAP--DVEQPLRAGEVRVDVRATGVNFRDVLLALGMYP 2874

to top

>RS2_ONYPE (Q6YR51) 30S ribosomal protein S2|
          Length = 271

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 18/55 (32%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
 Frame = +2

Query: 218 QMMLAADVHLG--TKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVIVAI 376
           + +L + V+ G  T+  + +M+ Y++  R +GI+IINL KT E+++ A + ++ I
Sbjct: 7   KQLLESGVYFGHATRKWNPKMKPYIFTSR-NGIHIINLKKTSEEIEKAYQELLNI 60

to top

>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger|
           receptor expressed by endothelial cells 2 protein)
           (SREC-II) (SRECRP-1)
          Length = 866

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 24/66 (36%), Positives = 32/66 (48%)
 Frame = +2

Query: 62  PQPVATSPAATTRAFSSPPLSRARGSRPKP*PPTMAAEGGGVRALSQREQDIQMMLAADV 241
           P+P      AT  A  SPP +RARG  P    PT A  GG  R+  +       MLAA++
Sbjct: 721 PRPPGLPEEATALAAPSPPRARARGRGPGLLEPTDA--GGPPRSAPEAAS----MLAAEL 774

Query: 242 HLGTKN 259
              T++
Sbjct: 775 RGKTRS 780

to top

>SPL11_ORYSA (Q64HA9) Spotted leaf protein 11 (Spotted leaf11) (Cell|
           death-related protein SPL11)
          Length = 694

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = -1

Query: 400 HNDVLGVFNRNNDPCGHLKLLPGLAKVDNVNTVSAALVD-VALHLEIAVLGAEVDVGGEH 224
           +ND+L V+++N DP   L +L  L++  ++ T++    + +ALH  +A  G +    GEH
Sbjct: 174 YNDLLSVYDKNYDPSAELAILGRLSEKLHLMTITDLTQESLALHEMVASGGGQDP--GEH 231

to top

>YR229_MIMIV (Q5UQC4) Putative ankyrin repeat protein R229|
          Length = 307

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 389 DIIVQSARPYGQRAVLKFAQYTGANAIAGRHTP 487
           D  +Q A  YG   +++F  + GAN +A R+ P
Sbjct: 227 DYAIQMACKYGYNEIVRFLVFNGANPMANRYYP 259

to top

>VID21_YARLI (Q6C7K8) Chromatin modification-related protein VID21|
          Length = 967

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 21/56 (37%), Positives = 26/56 (46%)
 Frame = +2

Query: 62  PQPVATSPAATTRAFSSPPLSRARGSRPKP*PPTMAAEGGGVRALSQREQDIQMML 229
           P+PV T   +T  A SSP L R R S      PT +       +L   EQ +Q ML
Sbjct: 69  PKPVPTLQTSTPDAGSSPELKRRRTSSIAQLSPTFSR-----TSLKTNEQQLQEML 119

to top

>FOXK1_MOUSE (P42128) Forkhead box protein K1 (Myocyte nuclear factor) (MNF)|
          Length = 617

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 24/66 (36%), Positives = 32/66 (48%)
 Frame = +2

Query: 8   SRARVLSHTRASPYK*SRPQPVATSPAATTRAFSSPPLSRARGSRPKP*PPTMAAEGGGV 187
           S AR L   R++P     P   A + AA   A +SPP      ++P P PP + AE G  
Sbjct: 8   SGARALLALRSAPCS---PVLCAAAAAAAFPATTSPP-----PAQPPPGPPALPAEPGPG 59

Query: 188 RALSQR 205
            AL +R
Sbjct: 60  GALHRR 65

to top

>WASF2_HUMAN (Q9Y6W5) Wiskott-Aldrich syndrome protein family member 2|
           (WASP-family protein member 2) (WAVE-2 protein)
           (Verprolin homology domain-containing protein 2)
          Length = 498

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = +2

Query: 62  PQPVATSPAATTRAFSSPPLSRARGSRPKP*PP 160
           P P    PAA       PPLS+  G  P P PP
Sbjct: 364 PPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPP 396

to top

>CSKI2_MOUSE (Q8VHK1) Caskin-2|
          Length = 1201

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
 Frame = +2

Query: 62   PQPVATSPAATTRAFSSPPLSRARGSRPKP*PPTMAAEGGGV------RALSQREQDIQM 223
            P+PV  S A T  AFS P L+   G  P+P PP      G V      + L Q    ++ 
Sbjct: 1101 PKPV--SVACTQLAFSGPKLAPRLG--PRPVPPPRPENTGPVCPSRAQQRLEQTSSSLEA 1156

Query: 224  ML-AADVHLGTKNCD 265
             L AA+  +GT+  D
Sbjct: 1157 ALRAAEKSIGTEERD 1171

to top

>IF2_RHOPA (Q6NCN5) Translation initiation factor IF-2|
          Length = 883

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +2

Query: 65  QPVATSPAATTRAFSSPPLSRARGSRPKP*PPTMAAEGG 181
           +P  TS   TT A + P  +  R   P   PP +AAE G
Sbjct: 182 KPAETSTTTTTAAPARPATTTTRTPTPAGRPPAVAAEAG 220

to top

>RT02_ARATH (Q9GCB9) Mitochondrial ribosomal protein S2|
          Length = 219

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +2

Query: 215 IQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQMAARVI 367
           IQ +L    HLG +  +   ++Y Y  R +G+ II+  KT   L+ AA  +
Sbjct: 8   IQKLLNTGAHLGRRAAEHHFKQYAYGTR-NGMTIIDSDKTLICLRSAAHFV 57

to top

>BSN_HUMAN (Q9UPA5) Bassoon protein (Zinc-finger protein 231)|
          Length = 3925

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +2

Query: 56   SRPQPV-ATSPAATTRAFSSPPLSRARGSRPKP*PPTMAAEGGGVRALSQ 202
            +R +P+  T+PAA   A  +P  +   G +P    P  AA GGG  ALS+
Sbjct: 2305 AREEPLPTTTPAAIKEAAGAPAPAPLAGQKP----PADAAPGGGSGALSR 2350

to top

>WASF4_HUMAN (Q8IV90) Wiskott-Aldrich syndrome protein family member 4|
           (WASP-family protein member 4)
          Length = 625

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +2

Query: 62  PQPVATSPAATTRAFSSPPLSR-ARGSRPKP*PP 160
           P P+   PAA       PPLS+  RG+ P P PP
Sbjct: 492 PPPLPPPPAADYPTLPPPPLSQPTRGAPPPPPPP 525

to top

>UL51_PRVKA (Q85227) Protein UL51|
          Length = 236

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 59  RPQPVATSPAATTRAFSSPPLSRARGSRPKP*PP 160
           +P PV  +PA       + P  RA  +RP P PP
Sbjct: 159 QPAPVRAAPAGLGLPVPAQPAPRATAARPAPPPP 192

to top

>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early|
           protein IE110) (VMW110) (Alpha-0 protein)
          Length = 775

 Score = 28.9 bits (63), Expect = 7.6
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = +2

Query: 62  PQPVATSPAATTRAFSSPPLSRARGSRPKP*PPTMAAEGGGVR 190
           P  ++ SP A+      PP +   GS P+P PP  AA  G  R
Sbjct: 361 PIVISDSPPASPHR---PPAAPMPGSAPRPGPPASAAASGPAR 400

to top

>ENA_DROME (Q8T4F7) Protein enabled|
          Length = 834

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 14/34 (41%), Positives = 16/34 (47%)
 Frame = +2

Query: 83  PAATTRAFSSPPLSRARGSRPKP*PPTMAAEGGG 184
           P A  + F+  P   A G  P P PP   A GGG
Sbjct: 575 PPAPPQMFNGAPPPPAMGGGPPPAPPAPPAMGGG 608

to top

>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4|
           (Transcription initiation factor TFIID 135 kDa subunit)
           (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130)
           (TAFII130)
          Length = 1085

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +2

Query: 71  VATSPAATTRAFSSPPLSRARGSRPKP*PPTMAAEGGG 184
           V+ SPA    A  + P   A G+ P+P P   A  GGG
Sbjct: 63  VSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGG 100

to top

>LEU21_METJA (Q58409) 3-isopropylmalate dehydratase large subunit 1 (EC|
           4.2.1.33) (Isopropylmalate isomerase 1) (Alpha-IPM
           isomerase 1) (IPMI 1)
          Length = 420

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +2

Query: 299 TDGIYIINLGKTWEKLQMAARVIVAIEN----PQDIIVQSARPYGQRAVLKFAQYTGANA 466
           TD  YI   G+TW K+    RV +  +N     +DI+++  +  G+R     A   G   
Sbjct: 136 TDMAYIYATGETWIKVPKTIRVDIVGKNENVSAKDIVLRVCKEIGRRGATYMAIEYGGEV 195

Query: 467 I 469
           +
Sbjct: 196 V 196

to top

>GCP60_MOUSE (Q8BMP6) Golgi resident protein GCP60 (Acyl-CoA-binding|
           domain-containing protein 3) (Golgi phosphoprotein 1)
           (GOLPH1) (Golgi complex-associated protein 1) (GOCAP1)
           (PBR- and PKA-associated protein 7) (Peripherial
           benzodiazepine receptor-asso
          Length = 524

 Score = 28.5 bits (62), Expect = 9.9
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
 Frame = -2

Query: 180 PPSAAMVGG*GFGREPRARESG---GEEKARVVAAGEVATGWGRDYLYGLA 37
           PPS+A   G G G   + RE G    E  A      E   G+G + LYGLA
Sbjct: 36  PPSSAPGNGLGSGASGQQREPGEAAAEGAAEEARRMEQHWGFGLEELYGLA 86


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,293,176
Number of Sequences: 219361
Number of extensions: 1398027
Number of successful extensions: 5197
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 4861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5169
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3362826254
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result