ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet102d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK119522.1| Oryza sativa (japonica cultivar-group) cDNA clon... 363 2e-97
2dbj|AK119220.1| Oryza sativa (japonica cultivar-group) cDNA clon... 363 2e-97
3dbj|AK104690.1| Oryza sativa (japonica cultivar-group) cDNA clon... 363 2e-97
4dbj|AK103994.1| Oryza sativa (japonica cultivar-group) cDNA clon... 363 2e-97
5dbj|AK103932.1| Oryza sativa (japonica cultivar-group) cDNA clon... 363 2e-97
6dbj|AK103922.1| Oryza sativa (japonica cultivar-group) cDNA clon... 363 2e-97
7dbj|AK071685.1| Oryza sativa (japonica cultivar-group) cDNA clon... 363 2e-97
8ref|XM_472744.1| Oryza sativa (japonica cultivar-group), predic... 355 6e-95
9gb|AY103602.1| Zea mays PCO093211 mRNA sequence 309 3e-81
10emb|X07157.1|ZMCHGADP Maize cytosolic mRNA for subunit A of chlo... 293 2e-76
11gb|M31481.1|MZENAR1 Maize glyceraldehyde-3-phosphate dehydrogena... 278 1e-71
12gb|AF022730.1|AF022730 Oryza sativa glyceralehyde-3-phosphate de... 242 6e-61
13emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4,... 214 1e-52
14emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4,... 214 1e-52
15dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 214 1e-52
16dbj|AK067817.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 2e-48
17emb|X15408.1|ZMGPA1 Maize Gpa1 gene for glyceraldehyde-3-phospha... 182 5e-43
18gb|M18976.1|MZEG3PD Zea mays chloroplast glyceraldehyde-3-phosph... 182 5e-43
19emb|X15406.1|ZMPGPA1 Maize pseudo-Gpa1 pseudogene for glyceralde... 170 2e-39
20emb|X15407.1|ZMPGPA2 Maize pseudo-Gpa2 pseudogene for glyceralde... 147 3e-32
21gb|AF010582.1|AF010582 Oryza sativa glyceraldehyde-3-phosphate d... 109 6e-21
22gb|AY103974.1| Zea mays PCO123560 mRNA sequence 96 8e-17
23ref|XM_493811.1| Oryza sativa (japonica cultivar-group), predic... 88 2e-14
24gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 88 2e-14
25gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome... 88 2e-14
26gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome... 88 2e-14
27dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 88 2e-14
28dbj|AK067755.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 2e-14
29dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic D... 88 2e-14
30gb|DQ270265.1| Mesostigma viride glyceraldehyde-3-phosphate dehy... 86 8e-14
31gb|DQ270269.1| Mesostigma viride glyceraldehyde-3-phosphate dehy... 84 3e-13
32gb|DQ270259.1| Scherffelia dubia glyceraldehyde-3-phosphate dehy... 84 3e-13
33emb|AJ246027.2|MPO246027 Marchantia polymorpha mRNA for glyceral... 72 1e-09
34gb|L27668.1|CRECPGAPA Chlamydomonas reinhardtii chloroplast glyc... 64 3e-07
35gb|DQ270268.1| Chlorokybus atmophyticus glyceraldehyde-3-phospha... 60 5e-06
36gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 56 7e-05
37gb|DQ301767.1| Dunaliella viridis chloroplast glyceraldehyde-3-p... 54 3e-04
38gb|DQ301766.1| Dunaliella viridis chloroplast glyceraldehyde-3-p... 54 3e-04
39gb|AY273819.1| Porphyra yezoensis glyceraldehyde-3-phosphate deh... 52 0.001
40dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 50 0.005
41emb|AJ246029.2|KFL246029 Klebsormidium flaccidum mRNA for partia... 48 0.018
42gb|DQ122925.1| Chlamydomonas incerta chloroplast glyceraldehyde-... 48 0.018
43gb|DQ122894.1| Chlamydomonas incerta chloroplast glyceraldehyde-... 48 0.018
44gb|AF162202.1|AF162202 Lactuca sativa NADP-dependent glyceraldeh... 48 0.018
45gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, com... 46 0.070
46gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 44 0.28
47emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ... 44 0.28
48gb|DQ230532.1| Streptomyces sp. Tu6071 phenalinolactone biosynth... 44 0.28
49dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 44 0.28
50gb|U44856.1|SAU44856 Streptomyces arenae pentalenolactone-insens... 44 0.28
51gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 42 1.1
52gb|AY450985.1| HIV-1 isolate NN92/732 from USA tat protein (tat)... 42 1.1
53gb|AY450984.1| HIV-1 isolate NN88/732 from USA tat protein (tat)... 42 1.1
54dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 1.1
55gb|U82749.1|MAU82749 Mycobacterium avium glyceraldehyde-3-phosph... 42 1.1
56gb|AE004716.1| Pseudomonas aeruginosa PAO1, section 277 of 529 o... 42 1.1
57gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 1.1
58gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.1
59gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 42 1.1
60gb|U43999.1|HIVU43999 Human immunodeficiency virus type 1 tat mR... 42 1.1
61ref|XM_483629.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.3
62gb|AY734209.1| HIV-1 isolate E089BB from USA tat protein (tat) g... 40 4.3
63gb|AY734165.1| HIV-1 isolate E055BB from USA tat protein (tat) g... 40 4.3
64gb|AY734164.1| HIV-1 isolate B055BB from USA tat protein (tat) g... 40 4.3
65gb|AY734163.1| HIV-1 isolate E055AA from USA tat protein (tat) g... 40 4.3
66gb|AY734162.1| HIV-1 isolate B055AA from USA tat protein (tat) g... 40 4.3
67gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 40 4.3
68gb|DQ396398.1| HIV-1 isolate 03ZAPS045MB2 from South Africa, com... 40 4.3
69gb|AY450998.1| HIV-1 isolate SS90/26 from USA tat protein (tat) ... 40 4.3
70gb|AY450969.1| HIV-1 isolate AE96/999260 from USA tat protein (t... 40 4.3
71gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 4.3
72emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete ... 40 4.3
73emb|BX640417.1| Bordetella pertussis strain Tohama I, complete g... 40 4.3
74gb|L81176.2|PSEFLAOP Pseudomonas aeruginosa flagellin (fliC) gen... 40 4.3
75gb|DQ270258.1| Cyanophora paradoxa glyceraldehyde-3-phosphate de... 40 4.3
76gb|AF408629.1| HIV-1 isolate A32879 from Argentina, complete genome 40 4.3
77gb|AY713412.1| HIV-1 isolate 90US_873 from USA gag protein (gag)... 40 4.3
78dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
79gb|AF326484.1|AF326484 Zea mays NOD26-like membrane integral pro... 40 4.3
80gb|AY857182.2| HIV-1 isolate 9762120 from Australia, partial genome 40 4.3
81dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
82gb|AF139825.1|AF139825 Pseudomonas aeruginosa strain PA103 flage... 40 4.3
83gb|AF139824.1|AF139824 Pseudomonas aeruginosa strain PAK flagell... 40 4.3
84gb|AF139823.1|AF139823 Pseudomonas aeruginosa strain cs2 flagell... 40 4.3
85gb|AF139822.1|AF139822 Pseudomonas aeruginosa strain cs32 flagel... 40 4.3
86emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 4.3
87gb|AF162198.1|AF162198 Lactuca sativa NADP-dependent glyceraldeh... 40 4.3
88gb|AY835778.1| HIV-1 isolate 5018-86 clone pbf6 from USA, comple... 40 4.3
89gb|AY835777.1| HIV-1 isolate 5018-83 clone pbf4 from USA, comple... 40 4.3
90gb|U80572.1|HIVU80572 HIV-1 patient TPVIII, sample 1995, tat pro... 40 4.3
91gb|U80555.1|HIVU80555 HIV-1 patient LTS16, sample 1995, tat prot... 40 4.3
92gb|AF000525.1|AF000525 HIV-1 strain CH94-A2tat from USA, Tat pro... 40 4.3
93gb|AF000522.1|AF000522 HIV-1 strain AD93-A3tat from USA, Tat pro... 40 4.3
94gb|U44018.1|HIVU44018 Human immunodeficiency virus type 1 tat mR... 40 4.3
95gb|U44017.1|HIVU44017 Human immunodeficiency virus type 1 tat mR... 40 4.3
96gb|U44012.1|HIVU44012 Human immunodeficiency virus type 1 tat mR... 40 4.3
97gb|U44011.1|HIVU44011 Human immunodeficiency virus type 1 tat mR... 40 4.3
98gb|U44009.1|HIVU44009 Human immunodeficiency virus type 1 tat mR... 40 4.3
99gb|U44008.1|HIVU44008 Human immunodeficiency virus type 1 tat mR... 40 4.3
100gb|U44002.1|HIVU44002 Human immunodeficiency virus type 1 tat mR... 40 4.3
101gb|U44001.1|HIVU44001 Human immunodeficiency virus type 1 tat mR... 40 4.3
102gb|U44000.1|HIVU44000 Human immunodeficiency virus type 1 tat mR... 40 4.3
103gb|U43998.1|HIVU43998 Human immunodeficiency virus type 1 tat mR... 40 4.3
104gb|U80472.1|HIVU80472 HIV-1 patient VE12 from Venezuela, sample ... 40 4.3
105dbj|D21159.1|RICASP1 Rice Osg4B gene for anther specific protein... 40 4.3 
>dbj|AK119522.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-D11, full
           insert sequence
          Length = 1468

 Score =  363 bits (183), Expect = 2e-97
 Identities = 275/305 (90%), Gaps = 3/305 (0%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 84
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 33  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 92

                                                                       
Query: 85  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 144
           |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 93  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 152

                                                                       
Query: 145 cgacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcg 204
           ||||||||||  ||| ||||||||||||||  |||||||  |||||||||||||| ||||
Sbjct: 153 cgacttcatgaacgcggtctccttcaggacccacgcggttggcacgagcggcggggcgcg 212

                                                                       
Query: 205 gaaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcg 264
           |  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 213 gcgggcgccgacggaggcgaagctgaaggtggcgatcaacgggttcggccgcatcgggcg 272

                                                                       
Query: 265 caacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccat 324
           |||||||||||||||||||||||||||||||||||||||||| || || || ||||||||
Sbjct: 273 caacttcctgcggtgctggcacgggcgcggcgacagctcgcccctcgacgtcatcgccat 332

                
Query: 325 caacg 329
           |||||
Sbjct: 333 caacg 337
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>dbj|AK119220.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-H03, full
           insert sequence
          Length = 1366

 Score =  363 bits (183), Expect = 2e-97
 Identities = 275/305 (90%), Gaps = 3/305 (0%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 84
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 33  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 92

                                                                       
Query: 85  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 144
           |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 93  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 152

                                                                       
Query: 145 cgacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcg 204
           ||||||||||  ||| ||||||||||||||  |||||||  |||||||||||||| ||||
Sbjct: 153 cgacttcatgaacgcggtctccttcaggacccacgcggttggcacgagcggcggggcgcg 212

                                                                       
Query: 205 gaaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcg 264
           |  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 213 gcgggcgccgacggaggcgaagctgaaggtggcgatcaacgggttcggccgcatcgggcg 272

                                                                       
Query: 265 caacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccat 324
           |||||||||||||||||||||||||||||||||||||||||| || || || ||||||||
Sbjct: 273 caacttcctgcggtgctggcacgggcgcggcgacagctcgcccctcgacgtcatcgccat 332

                
Query: 325 caacg 329
           |||||
Sbjct: 333 caacg 337
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>dbj|AK104690.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-G03, full
           insert sequence
          Length = 1540

 Score =  363 bits (183), Expect = 2e-97
 Identities = 275/305 (90%), Gaps = 3/305 (0%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 84
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 38  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 97

                                                                       
Query: 85  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 144
           |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 98  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 157

                                                                       
Query: 145 cgacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcg 204
           ||||||||||  ||| ||||||||||||||  |||||||  |||||||||||||| ||||
Sbjct: 158 cgacttcatgaacgcggtctccttcaggacccacgcggttggcacgagcggcggggcgcg 217

                                                                       
Query: 205 gaaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcg 264
           |  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 218 gcgggcgccgacggaggcgaagctgaaggtggcgatcaacgggttcggccgcatcgggcg 277

                                                                       
Query: 265 caacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccat 324
           |||||||||||||||||||||||||||||||||||||||||| || || || ||||||||
Sbjct: 278 caacttcctgcggtgctggcacgggcgcggcgacagctcgcccctcgacgtcatcgccat 337

                
Query: 325 caacg 329
           |||||
Sbjct: 338 caacg 342
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>dbj|AK103994.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F06, full
           insert sequence
          Length = 1538

 Score =  363 bits (183), Expect = 2e-97
 Identities = 275/305 (90%), Gaps = 3/305 (0%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 84
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 38  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 97

                                                                       
Query: 85  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 144
           |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 98  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 157

                                                                       
Query: 145 cgacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcg 204
           ||||||||||  ||| ||||||||||||||  |||||||  |||||||||||||| ||||
Sbjct: 158 cgacttcatgaacgcggtctccttcaggacccacgcggttggcacgagcggcggggcgcg 217

                                                                       
Query: 205 gaaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcg 264
           |  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 218 gcgggcgccgacggaggcgaagctgaaggtggcgatcaacgggttcggccgcatcgggcg 277

                                                                       
Query: 265 caacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccat 324
           |||||||||||||||||||||||||||||||||||||||||| || || || ||||||||
Sbjct: 278 caacttcctgcggtgctggcacgggcgcggcgacagctcgcccctcgacgtcatcgccat 337

                
Query: 325 caacg 329
           |||||
Sbjct: 338 caacg 342
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>dbj|AK103932.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E09, full
           insert sequence
          Length = 1566

 Score =  363 bits (183), Expect = 2e-97
 Identities = 275/305 (90%), Gaps = 3/305 (0%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 84
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 38  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 97

                                                                       
Query: 85  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 144
           |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 98  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 157

                                                                       
Query: 145 cgacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcg 204
           ||||||||||  ||| ||||||||||||||  |||||||  |||||||||||||| ||||
Sbjct: 158 cgacttcatgaacgcggtctccttcaggacccacgcggttggcacgagcggcggggcgcg 217

                                                                       
Query: 205 gaaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcg 264
           |  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 218 gcgggcgccgacggaggcgaagctgaaggtggcgatcaacgggttcggccgcatcgggcg 277

                                                                       
Query: 265 caacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccat 324
           |||||||||||||||||||||||||||||||||||||||||| || || || ||||||||
Sbjct: 278 caacttcctgcggtgctggcacgggcgcggcgacagctcgcccctcgacgtcatcgccat 337

                
Query: 325 caacg 329
           |||||
Sbjct: 338 caacg 342
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>dbj|AK103922.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-B10, full
           insert sequence
          Length = 1473

 Score =  363 bits (183), Expect = 2e-97
 Identities = 275/305 (90%), Gaps = 3/305 (0%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 84
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 38  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 97

                                                                       
Query: 85  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 144
           |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 98  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 157

                                                                       
Query: 145 cgacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcg 204
           ||||||||||  ||| ||||||||||||||  |||||||  |||||||||||||| ||||
Sbjct: 158 cgacttcatgaacgcggtctccttcaggacccacgcggttggcacgagcggcggggcgcg 217

                                                                       
Query: 205 gaaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcg 264
           |  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 218 gcgggcgccgacggaggcgaagctgaaggtggcgatcaacgggttcggccgcatcgggcg 277

                                                                       
Query: 265 caacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccat 324
           |||||||||||||||||||||||||||||||||||||||||| || || || ||||||||
Sbjct: 278 caacttcctgcggtgctggcacgggcgcggcgacagctcgcccctcgacgtcatcgccat 337

                
Query: 325 caacg 329
           |||||
Sbjct: 338 caacg 342
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>dbj|AK071685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108H17, full
           insert sequence
          Length = 1571

 Score =  363 bits (183), Expect = 2e-97
 Identities = 275/305 (90%), Gaps = 3/305 (0%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 84
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 34  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 93

                                                                       
Query: 85  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 144
           |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 94  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 153

                                                                       
Query: 145 cgacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcg 204
           ||||||||||  ||| ||||||||||||||  |||||||  |||||||||||||| ||||
Sbjct: 154 cgacttcatgaacgcggtctccttcaggacccacgcggttggcacgagcggcggggcgcg 213

                                                                       
Query: 205 gaaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcg 264
           |  ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 214 gcgggcgccgacggaggcgaagctgaaggtggcgatcaacgggttcggccgcatcgggcg 273

                                                                       
Query: 265 caacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccat 324
           |||||||||||||||||||||||||||||||||||||||||| || || || ||||||||
Sbjct: 274 caacttcctgcggtgctggcacgggcgcggcgacagctcgcccctcgacgtcatcgccat 333

                
Query: 325 caacg 329
           |||||
Sbjct: 334 caacg 338
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>ref|XM_472744.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1209

 Score =  355 bits (179), Expect = 6e-95
 Identities = 271/301 (90%), Gaps = 3/301 (0%)
 Strand = Plus / Plus

                                                                       
Query: 32  atggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgctggag 88
           ||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  ||||
Sbjct: 1   atggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtcggag 60

                                                                       
Query: 89  ttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccgacgac 148
           |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 61  ttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccgacgac 120

                                                                       
Query: 149 ttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcggaag 208
           ||||||  ||| ||||||||||||||  |||||||  |||||||||||||| |||||  |
Sbjct: 121 ttcatgaacgcggtctccttcaggacccacgcggttggcacgagcggcggggcgcggcgg 180

                                                                       
Query: 209 gcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaac 268
           |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 181 gcgccgacggaggcgaagctgaaggtggcgatcaacgggttcggccgcatcgggcgcaac 240

                                                                       
Query: 269 ttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatcaac 328
           |||||||||||||||||||||||||||||||||||||| || || || ||||||||||||
Sbjct: 241 ttcctgcggtgctggcacgggcgcggcgacagctcgcccctcgacgtcatcgccatcaac 300

            
Query: 329 g 329
           |
Sbjct: 301 g 301
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>gb|AY103602.1| Zea mays PCO093211 mRNA sequence
          Length = 1490

 Score =  309 bits (156), Expect = 3e-81
 Identities = 222/244 (90%)
 Strand = Plus / Plus

                                                                       
Query: 86  gagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccgac 145
           |||||||||||||| ||||||||  ||||||||||  | || ||||||||||||||||||
Sbjct: 91  gagttctccgggctcaggagctccgcgtcgctgcccatgcgccggaatgccacctccgac 150

                                                                       
Query: 146 gacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcgg 205
           |||||||||||||||||||||||||||||  |||||||  ||||||||||||||||||||
Sbjct: 151 gacttcatgtccgccgtctccttcaggacccacgcggtcggcacgagcggcgggtcgcgg 210

                                                                       
Query: 206 aaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgc 265
             ||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 211 cgggcgccgacggaggcgaagctgaaggtggccatcaacgggttcggccgcatcgggcgc 270

                                                                       
Query: 266 aacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatc 325
           |||||||||||||||||||||||||||||||||  |||||| || || || |||||||||
Sbjct: 271 aacttcctgcggtgctggcacgggcgcggcgacgcctcgcccctcgacgtcatcgccatc 330

               
Query: 326 aacg 329
           ||||
Sbjct: 331 aacg 334
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>emb|X07157.1|ZMCHGADP Maize cytosolic mRNA for subunit A of chloroplast GAPDH (GapA)
           glyceraldehyde-3-phosphate dehydrogenase
          Length = 1382

 Score =  293 bits (148), Expect = 2e-76
 Identities = 220/244 (90%)
 Strand = Plus / Plus

                                                                       
Query: 86  gagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccgac 145
           |||||||||||||| ||||||||  ||||||||||  | || ||||||||||||||||||
Sbjct: 1   gagttctccgggctcaggagctccgcgtcgctgcccatgcgccggaatgccacctccgac 60

                                                                       
Query: 146 gacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcgg 205
           |||||||||||||||||||||||||||||  |||||||  |||||||||||||| |||||
Sbjct: 61  gacttcatgtccgccgtctccttcaggacccacgcggtcggcacgagcggcgggccgcgg 120

                                                                       
Query: 206 aaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgc 265
             ||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 121 cgggcgccgacggaggcgaagctgaaggtggccatcaacgggttcggccgcatcgggcgc 180

                                                                       
Query: 266 aacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatc 325
           ||||||||||||||||||||||| |||||||||  |||||| || || || |||||||||
Sbjct: 181 aacttcctgcggtgctggcacggccgcggcgacgcctcgcccctcgatgtcatcgccatc 240

               
Query: 326 aacg 329
           ||||
Sbjct: 241 aacg 244
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>gb|M31481.1|MZENAR1 Maize glyceraldehyde-3-phosphate dehydrogenase mRNA, 5' end
          Length = 386

 Score =  278 bits (140), Expect = 1e-71
 Identities = 218/244 (89%)
 Strand = Plus / Plus

                                                                       
Query: 86  gagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccgac 145
           |||||||||||||| ||||||||  ||||||||||  | || ||||||||||||||||||
Sbjct: 72  gagttctccgggctcaggagctccgcgtcgctgcccatgcgccggaatgccacctccgac 131

                                                                       
Query: 146 gacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcgg 205
           |||||||||||||||||||||||||||||  |||||||  | |||||||||||| |||||
Sbjct: 132 gacttcatgtccgccgtctccttcaggacccacgcggtcggtacgagcggcgggccgcgg 191

                                                                       
Query: 206 aaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgc 265
             ||||||||||||||| ||||| |||||||| |||||||||||||| ||||||||||||
Sbjct: 192 cgggcgccgacggaggcaaagctgaaggtggccatcaacgggttcggccgcatcgggcgc 251

                                                                       
Query: 266 aacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatc 325
           |||||||||||||||||||||||||||||||||   ||||| || || || |||||||||
Sbjct: 252 aacttcctgcggtgctggcacgggcgcggcgacgcgtcgcccctcgacgtcatcgccatc 311

               
Query: 326 aacg 329
           ||||
Sbjct: 312 aacg 315
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>gb|AF022730.1|AF022730 Oryza sativa glyceralehyde-3-phosphate dehydrogenase subunit
           (GAPDH) mRNA, partial cds
          Length = 1073

 Score =  242 bits (122), Expect = 6e-61
 Identities = 235/271 (86%), Gaps = 5/271 (1%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggacatggcgtcgcccatgctctccacggccatggcgccactccagggg----ggcatgc 83
           ||||||||||||||| ||||||||| | ||||  | |||||||||||||    ||| || 
Sbjct: 41  ggacatggcgtcgcc-atgctctccgccgccaccgtgccactccaggggaggcggcttgt 99

                                                                       
Query: 84  tggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccg 143
            ||| |||||||| |||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 100 cggatttctccggcctgaggagctcgtcgtcgctgccgctgcggcgggatgccacctccg 159

                                                                       
Query: 144 acgacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgc 203
           || ||||||||  | | ||||||||||||||  |||||||  |||||| ||||||| |||
Sbjct: 160 acaacttcatgaacccggtctccttcaggacccacgcggttggcacgaacggcggggcgc 219

                                                                       
Query: 204 ggaaggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggc 263
           ||  |||||| |||||||| || || ||||||||||||||||||||||| ||| ||||||
Sbjct: 220 ggcgggcgcccacggaggcaaaactgaaggtggcgatcaacgggttcggccgcttcgggc 279

                                          
Query: 264 gcaacttcctgcggtgctggcacgggcgcgg 294
           |||||||||||||||||||||||||||||||
Sbjct: 280 gcaacttcctgcggtgctggcacgggcgcgg 310
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>emb|AL606636.4|OSJN00075 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0036B21,
              complete sequence
          Length = 138969

 Score =  214 bits (108), Expect = 1e-52
 Identities = 135/144 (93%)
 Strand = Plus / Plus

                                                                          
Query: 186    gcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggtggcgatcaacg 245
              |||||||||||||| |||||  ||||||||||||||||||||| ||||||||||||||||
Sbjct: 120991 gcacgagcggcggggcgcggcgggcgccgacggaggcgaagctgaaggtggcgatcaacg 121050

                                                                          
Query: 246    ggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 305
              ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121051 ggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 121110

                                      
Query: 306    cgctggaggtgatcgccatcaacg 329
              | || || || |||||||||||||
Sbjct: 121111 ccctcgacgtcatcgccatcaacg 121134



 Score =  141 bits (71), Expect = 2e-30
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                          
Query: 85     ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 144
              |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 120791 ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 120850

                                                     
Query: 145    cgacttcatgtccgccgtctccttcaggacatacgcggt 183
              ||||||||||  ||| ||||||||||||||  |||||||
Sbjct: 120851 cgacttcatgaacgcggtctccttcaggacccacgcggt 120889



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                             
Query: 28     ggacatggcgtcgcccatgctctccacggccatggcgccactccagg 74
              ||||||||||||||||||||||||| | ||||  | |||||||||||
Sbjct: 120634 ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagg 120680
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>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16,
            complete sequence
          Length = 176383

 Score =  214 bits (108), Expect = 1e-52
 Identities = 135/144 (93%)
 Strand = Plus / Plus

                                                                        
Query: 186  gcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggtggcgatcaacg 245
            |||||||||||||| |||||  ||||||||||||||||||||| ||||||||||||||||
Sbjct: 6672 gcacgagcggcggggcgcggcgggcgccgacggaggcgaagctgaaggtggcgatcaacg 6731

                                                                        
Query: 246  ggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 305
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6732 ggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 6791

                                    
Query: 306  cgctggaggtgatcgccatcaacg 329
            | || || || |||||||||||||
Sbjct: 6792 ccctcgacgtcatcgccatcaacg 6815



 Score =  141 bits (71), Expect = 2e-30
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                        
Query: 85   ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 144
            |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 6472 ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 6531

                                                   
Query: 145  cgacttcatgtccgccgtctccttcaggacatacgcggt 183
            ||||||||||  ||| ||||||||||||||  |||||||
Sbjct: 6532 cgacttcatgaacgcggtctccttcaggacccacgcggt 6570



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                           
Query: 28   ggacatggcgtcgcccatgctctccacggccatggcgccactccagg 74
            ||||||||||||||||||||||||| | ||||  | |||||||||||
Sbjct: 6315 ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagg 6361
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  214 bits (108), Expect = 1e-52
 Identities = 135/144 (93%)
 Strand = Plus / Plus

                                                                            
Query: 186      gcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggtggcgatcaacg 245
                |||||||||||||| |||||  ||||||||||||||||||||| ||||||||||||||||
Sbjct: 22912216 gcacgagcggcggggcgcggcgggcgccgacggaggcgaagctgaaggtggcgatcaacg 22912275

                                                                            
Query: 246      ggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 305
                ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22912276 ggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 22912335

                                        
Query: 306      cgctggaggtgatcgccatcaacg 329
                | || || || |||||||||||||
Sbjct: 22912336 ccctcgacgtcatcgccatcaacg 22912359



 Score =  141 bits (71), Expect = 2e-30
 Identities = 92/99 (92%)
 Strand = Plus / Plus

                                                                            
Query: 85       ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 144
                |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 22912016 ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 22912075

                                                       
Query: 145      cgacttcatgtccgccgtctccttcaggacatacgcggt 183
                ||||||||||  ||| ||||||||||||||  |||||||
Sbjct: 22912076 cgacttcatgaacgcggtctccttcaggacccacgcggt 22912114



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                               
Query: 28       ggacatggcgtcgcccatgctctccacggccatggcgccactccagg 74
                ||||||||||||||||||||||||| | ||||  | |||||||||||
Sbjct: 22911859 ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagg 22911905
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>dbj|AK067817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O22, full
           insert sequence
          Length = 778

 Score =  200 bits (101), Expect = 2e-48
 Identities = 175/199 (87%), Gaps = 3/199 (1%)
 Strand = Plus / Plus

                                                                       
Query: 28  ggacatggcgtcgcccatgctctccacggccatggcgccactccaggggggca---tgct 84
           ||||||||||||||||||||||||| | ||||  | |||||||||||| |||    ||  
Sbjct: 39  ggacatggcgtcgcccatgctctccgccgccaccgtgccactccagggaggcggcttgtc 98

                                                                       
Query: 85  ggagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccga 144
           |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 99  ggagttctccggcctgaggagctcgtcgtcgctgccgctgcggcggaatgccacctccga 158

                                                                       
Query: 145 cgacttcatgtccgccgtctccttcaggacatacgcggtgagcacgagcggcgggtcgcg 204
           ||||||||||  ||| ||||||||||||||  |||||||  |||||||||||||| ||||
Sbjct: 159 cgacttcatgaacgcggtctccttcaggacccacgcggttggcacgagcggcggggcgcg 218

                              
Query: 205 gaaggcgccgacggaggcg 223
           |  ||||||||||||||||
Sbjct: 219 gcgggcgccgacggaggcg 237
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>emb|X15408.1|ZMGPA1 Maize Gpa1 gene for glyceraldehyde-3-phosphate dehydrogenase subunit
            A
          Length = 6414

 Score =  182 bits (92), Expect = 5e-43
 Identities = 131/144 (90%)
 Strand = Plus / Plus

                                                                        
Query: 186  gcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggtggcgatcaacg 245
            |||||||||||||| |||||  ||||||||||||||||||||| |||||||| ||||| |
Sbjct: 1985 gcacgagcggcgggccgcggcgggcgccgacggaggcgaagctgaaggtggccatcaatg 2044

                                                                        
Query: 246  ggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 305
            ||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 2045 ggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacgcctcgc 2104

                                    
Query: 306  cgctggaggtgatcgccatcaacg 329
            | || || || |||||||||||||
Sbjct: 2105 ccctcgacgtcatcgccatcaacg 2128



 Score =  123 bits (62), Expect = 4e-25
 Identities = 89/98 (90%)
 Strand = Plus / Plus

                                                                        
Query: 86   gagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccgac 145
            |||||||||||||| ||||||||  ||||||||||  | || ||||||||||||||||||
Sbjct: 1703 gagttctccgggctcaggagctccgcgtcgctgcccatgcgccggaatgccacctccgac 1762

                                                  
Query: 146  gacttcatgtccgccgtctccttcaggacatacgcggt 183
            |||||||||||||||||||||||||||||  |||||||
Sbjct: 1763 gacttcatgtccgccgtctccttcaggacccacgcggt 1800
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>gb|M18976.1|MZEG3PD Zea mays chloroplast glyceraldehyde-3-phosphate dehydrogenase gene,
            complete cds, clone lambda-gapA1
          Length = 6414

 Score =  182 bits (92), Expect = 5e-43
 Identities = 131/144 (90%)
 Strand = Plus / Plus

                                                                        
Query: 186  gcacgagcggcgggtcgcggaaggcgccgacggaggcgaagctcaaggtggcgatcaacg 245
            |||||||||||||| |||||  ||||||||||||||||||||| |||||||| ||||| |
Sbjct: 1985 gcacgagcggcgggccgcggcgggcgccgacggaggcgaagctgaaggtggccatcaatg 2044

                                                                        
Query: 246  ggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgc 305
            ||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 2045 ggttcggccgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacgcctcgc 2104

                                    
Query: 306  cgctggaggtgatcgccatcaacg 329
            | || || || |||||||||||||
Sbjct: 2105 ccctcgacgtcatcgccatcaacg 2128



 Score =  123 bits (62), Expect = 4e-25
 Identities = 89/98 (90%)
 Strand = Plus / Plus

                                                                        
Query: 86   gagttctccgggctgaggagctcgtcgtcgctgccgctccggcggaatgccacctccgac 145
            |||||||||||||| ||||||||  ||||||||||  | || ||||||||||||||||||
Sbjct: 1703 gagttctccgggctcaggagctccgcgtcgctgcccatgcgccggaatgccacctccgac 1762

                                                  
Query: 146  gacttcatgtccgccgtctccttcaggacatacgcggt 183
            |||||||||||||||||||||||||||||  |||||||
Sbjct: 1763 gacttcatgtccgccgtctccttcaggacccacgcggt 1800
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>emb|X15406.1|ZMPGPA1 Maize pseudo-Gpa1 pseudogene for glyceraldehyde-3-phosphate
            dehydrogenase subunit A
          Length = 5922

 Score =  170 bits (86), Expect = 2e-39
 Identities = 113/122 (92%)
 Strand = Plus / Plus

                                                                        
Query: 208  ggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaa 267
            |||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||
Sbjct: 2030 ggcgccgacggaggcgaagctcaaggtggccataaacgggttcggccgcatcgggcgcaa 2089

                                                                        
Query: 268  cttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatcaa 327
            |||||||||||||||||||||||||||||||  |||||| || || || |||||||||||
Sbjct: 2090 cttcctgcggtgctggcacgggcgcggcgacgactcgcccctcgacgtcatcgccatcaa 2149

              
Query: 328  cg 329
            ||
Sbjct: 2150 cg 2151



 Score =  109 bits (55), Expect = 6e-21
 Identities = 76/83 (91%)
 Strand = Plus / Plus

                                                                        
Query: 101  aggagctcgtcgtcgctgccgctccggcggaatgccacctccgacgacttcatgtccgcc 160
            ||||||||  ||||||||||| | || |||||||||||||||||||||||||||||||||
Sbjct: 1757 aggagctccgcgtcgctgccgatgcgccggaatgccacctccgacgacttcatgtccgcc 1816

                                   
Query: 161  gtctccttcaggacatacgcggt 183
            ||||||||||||||  |||||||
Sbjct: 1817 gtctccttcaggacccacgcggt 1839
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>emb|X15407.1|ZMPGPA2 Maize pseudo-Gpa2 pseudogene for glyceraldehyde-3-phosphate
            dehydrogenase subunit A
          Length = 8839

 Score =  147 bits (74), Expect = 3e-32
 Identities = 110/122 (90%)
 Strand = Plus / Plus

                                                                        
Query: 208  ggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaa 267
            ||||||||| ||||| |||||||||||||| |||||||||||||| ||||||||||| ||
Sbjct: 5211 ggcgccgacagaggcaaagctcaaggtggccatcaacgggttcggtcgcatcgggcgtaa 5270

                                                                        
Query: 268  cttcctgcggtgctggcacgggcgcggcgacagctcgccgctggaggtgatcgccatcaa 327
            |||||||||||||||||||||||||| ||||  |||||| || || || |||||||||||
Sbjct: 5271 cttcctgcggtgctggcacgggcgcgacgacgactcgcccctcgacgtcatcgccatcaa 5330

              
Query: 328  cg 329
            ||
Sbjct: 5331 cg 5332



 Score = 89.7 bits (45), Expect = 5e-15
 Identities = 66/73 (90%)
 Strand = Plus / Plus

                                                                        
Query: 101  aggagctcgtcgtcgctgccgctccggcggaatgccacctccgacgacttcatgtccgcc 160
            ||||||||  ||||||||||| | ||  ||||||||||||||||||| ||||||||||||
Sbjct: 4928 aggagctccgcgtcgctgccgatgcgctggaatgccacctccgacgaattcatgtccgcc 4987

                         
Query: 161  gtctccttcagga 173
            |||||||||||||
Sbjct: 4988 gtctccttcagga 5000
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>gb|AF010582.1|AF010582 Oryza sativa glyceraldehyde-3-phosphate dehydrogenase (GAPDH) mRNA,
           partial cds
          Length = 804

 Score =  109 bits (55), Expect = 6e-21
 Identities = 70/75 (93%)
 Strand = Plus / Plus

                                                                       
Query: 254 cgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcgacagctcgccgctggag 313
           |||||||||||||||||||||||||||||||||||||||||| |||||||||| || || 
Sbjct: 7   cgcatcgggcgcaacttcctgcggtgctggcacgggcgcggcaacagctcgcccctcgac 66

                          
Query: 314 gtgatcgccatcaac 328
           || ||||||||||||
Sbjct: 67  gtcatcgccatcaac 81
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>gb|AY103974.1| Zea mays PCO123560 mRNA sequence
          Length = 1889

 Score = 95.6 bits (48), Expect = 8e-17
 Identities = 69/76 (90%)
 Strand = Plus / Plus

                                                                       
Query: 218 gaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcgg 277
           ||||||||||| ||||||||||||||||| ||||| |||||||| || |||||||| |||
Sbjct: 479 gaggcgaagctgaaggtggcgatcaacggcttcggccgcatcggccggaacttcctccgg 538

                           
Query: 278 tgctggcacgggcgcg 293
           ||||||||||| ||||
Sbjct: 539 tgctggcacggccgcg 554
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>ref|XM_493811.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1335

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                       
Query: 208 ggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaa 267
           ||||||| | ||||||||||||||||| || |||||||| ||||| ||||| || |||||
Sbjct: 213 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 272

                               
Query: 268 cttcctgcggtgctggcacg 287
           |||||| |||||||||||||
Sbjct: 273 cttcctccggtgctggcacg 292
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                           
Query: 208     ggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaa 267
               ||||||| | ||||||||||||||||| || |||||||| ||||| ||||| || |||||
Sbjct: 1643182 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 1643241

                                   
Query: 268     cttcctgcggtgctggcacg 287
               |||||| |||||||||||||
Sbjct: 1643242 cttcctccggtgctggcacg 1643261
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>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07,
             complete sequence
          Length = 87592

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                         
Query: 208   ggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaa 267
             ||||||| | ||||||||||||||||| || |||||||| ||||| ||||| || |||||
Sbjct: 50628 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 50687

                                 
Query: 268   cttcctgcggtgctggcacg 287
             |||||| |||||||||||||
Sbjct: 50688 cttcctccggtgctggcacg 50707
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>gb|AC144426.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJA1015F07,
              complete sequence
          Length = 127098

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                          
Query: 208    ggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaa 267
              ||||||| | ||||||||||||||||| || |||||||| ||||| ||||| || |||||
Sbjct: 122743 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 122802

                                  
Query: 268    cttcctgcggtgctggcacg 287
              |||||| |||||||||||||
Sbjct: 122803 cttcctccggtgctggcacg 122822
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                           
Query: 208     ggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaa 267
               ||||||| | ||||||||||||||||| || |||||||| ||||| ||||| || |||||
Sbjct: 1643180 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 1643239

                                   
Query: 268     cttcctgcggtgctggcacg 287
               |||||| |||||||||||||
Sbjct: 1643240 cttcctccggtgctggcacg 1643259
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>dbj|AK067755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118G18, full
           insert sequence
          Length = 1668

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                       
Query: 208 ggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaa 267
           ||||||| | ||||||||||||||||| || |||||||| ||||| ||||| || |||||
Sbjct: 268 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 327

                               
Query: 268 cttcctgcggtgctggcacg 287
           |||||| |||||||||||||
Sbjct: 328 cttcctccggtgctggcacg 347
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>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
             clone:P0043E01
          Length = 154128

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 71/80 (88%)
 Strand = Plus / Plus

                                                                         
Query: 208   ggcgccgacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaa 267
             ||||||| | ||||||||||||||||| || |||||||| ||||| ||||| || |||||
Sbjct: 55645 ggcgccggctgaggcgaagctcaaggttgccatcaacggcttcggccgcattggccgcaa 55704

                                 
Query: 268   cttcctgcggtgctggcacg 287
             |||||| |||||||||||||
Sbjct: 55705 cttcctccggtgctggcacg 55724
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>gb|DQ270265.1| Mesostigma viride glyceraldehyde-3-phosphate dehydrogenase subunit
           A (gapA) mRNA, partial cds
          Length = 1437

 Score = 85.7 bits (43), Expect = 8e-14
 Identities = 49/51 (96%)
 Strand = Plus / Plus

                                                              
Query: 238 gatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgg 288
           ||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 3   gatcaacgggttcgggcgcattggccgcaacttcctgcggtgctggcacgg 53
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>gb|DQ270269.1| Mesostigma viride glyceraldehyde-3-phosphate dehydrogenase subunit
           B (gapB) mRNA, complete cds
          Length = 1481

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                       
Query: 218 gaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcgg 277
           ||||||||||||||||| || ||||| || ||||| ||||||||||||||||||||||| 
Sbjct: 158 gaggcgaagctcaaggttgccatcaatggcttcggccgcatcgggcgcaacttcctgcgc 217

                 
Query: 278 tgctgg 283
           ||||||
Sbjct: 218 tgctgg 223
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>gb|DQ270259.1| Scherffelia dubia glyceraldehyde-3-phosphate dehydrogenase subunit
           A (gapA) mRNA, complete cds
          Length = 1210

 Score = 83.8 bits (42), Expect = 3e-13
 Identities = 60/66 (90%)
 Strand = Plus / Plus

                                                                       
Query: 229 caaggtggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgg 288
           ||||||||| |||||||| ||||| |||||||| |||||||||||||| |||||||||||
Sbjct: 172 caaggtggccatcaacggcttcggccgcatcggccgcaacttcctgcgctgctggcacgg 231

                 
Query: 289 gcgcgg 294
            |||||
Sbjct: 232 ccgcgg 237
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>emb|AJ246027.2|MPO246027 Marchantia polymorpha mRNA for glyceraldehyde-3-phosphate
           dehydrogenase, subunit GapB
          Length = 1770

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                   
Query: 239 atcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgcgg 294
           |||||||||||||| || ||||| |||||||||||||| ||||||||||| |||||
Sbjct: 341 atcaacgggttcggtcgtatcggtcgcaacttcctgcgctgctggcacggacgcgg 396
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>gb|L27668.1|CRECPGAPA Chlamydomonas reinhardtii chloroplast glyceraldehyde-3-phosphate
           dehydrogenase (gapA) gene, complete cds
          Length = 2219

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 233 gtggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgg 288
           ||||| |||||||| ||||| ||||| || |||||||||||||| |||||||||||
Sbjct: 613 gtggccatcaacggcttcggtcgcattggccgcaacttcctgcgctgctggcacgg 668
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>gb|DQ270268.1| Chlorokybus atmophyticus glyceraldehyde-3-phosphate dehydrogenase
           subunit B (gapB) mRNA, complete cds
          Length = 1444

 Score = 60.0 bits (30), Expect = 5e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                       
Query: 233 gtggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgggcgc 292
           ||||| |||||||| ||||| ||||| || ||||||||||| || ||||||||||| |||
Sbjct: 282 gtggccatcaacggcttcggacgcattggtcgcaacttcctccgctgctggcacggtcgc 341

             
Query: 293 gg 294
           ||
Sbjct: 342 gg 343
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 56.0 bits (28), Expect = 7e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                       
Query: 228     tcaaggtggcgatcaacgggttcgggcgcatcgggcgcaa 267
               ||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 2085730 tcaaggttgcgatcaacggtttcggacgcatcgggcgcaa 2085691
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>gb|DQ301767.1| Dunaliella viridis chloroplast glyceraldehyde-3-phosphate
           dehydrogenase (GapA2) mRNA, complete cds; nuclear gene
           for chloroplast product
          Length = 1330

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 233 gtggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctgg 283
           ||||| |||||||| ||||| ||||| || |||||||||||||| ||||||
Sbjct: 130 gtggccatcaacggcttcggccgcattggccgcaacttcctgcgctgctgg 180
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>gb|DQ301766.1| Dunaliella viridis chloroplast glyceraldehyde-3-phosphate
           dehydrogenase (GapA1) mRNA, complete cds; nuclear gene
           for chloroplast product
          Length = 1478

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                              
Query: 233 gtggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctgg 283
           ||||| |||||||| ||||| ||||| || |||||||||||||| ||||||
Sbjct: 136 gtggccatcaacggcttcggccgcattggccgcaacttcctgcgctgctgg 186
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>gb|AY273819.1| Porphyra yezoensis glyceraldehyde-3-phosphate dehydrogenase subunit
           A (GAPA) mRNA, complete cds
          Length = 1404

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 47/54 (87%)
 Strand = Plus / Plus

                                                                 
Query: 223 gaagctcaaggtggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcg 276
           ||||||||||||||| |||| ||| || || ||||| || ||||||||||||||
Sbjct: 317 gaagctcaaggtggctatcagcggctttggccgcattggccgcaacttcctgcg 370
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                           
Query: 239    atcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctgg 283
              |||||||| |||||| | ||||||||||||||| |||| ||||||
Sbjct: 567772 atcaacggcttcgggaggatcgggcgcaacttcttgcgctgctgg 567816
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>emb|AJ246029.2|KFL246029 Klebsormidium flaccidum mRNA for partial glyceraldehyde-3-phosphate
           dehydrogenase, subunit GapA
          Length = 949

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                       
Query: 245 gggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgg 288
           ||||||||| | || |||||||||||||| ||||||||| ||||
Sbjct: 18  gggttcgggaggattgggcgcaacttcctccggtgctggaacgg 61
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>gb|DQ122925.1| Chlamydomonas incerta chloroplast glyceraldehyde-3-phosphate
           dehydrogenase (GapA) gene, partial cds; nuclear gene for
           chloroplast product
          Length = 1772

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 233 gtggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgg 288
           ||||| || ||||| || || ||||| || |||||||||||||| |||||||||||
Sbjct: 257 gtggccattaacggctttggtcgcattggccgcaacttcctgcgctgctggcacgg 312
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>gb|DQ122894.1| Chlamydomonas incerta chloroplast glyceraldehyde-3-phosphate
           dehydrogenase (GapA) mRNA, partial cds; nuclear gene for
           chloroplast product
          Length = 1708

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                   
Query: 233 gtggcgatcaacgggttcgggcgcatcgggcgcaacttcctgcggtgctggcacgg 288
           ||||| || ||||| || || ||||| || |||||||||||||| |||||||||||
Sbjct: 103 gtggccattaacggctttggtcgcattggccgcaacttcctgcgctgctggcacgg 158
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>gb|AF162202.1|AF162202 Lactuca sativa NADP-dependent glyceraldehyde phosphate
           dehydrogenase, partial cds
          Length = 350

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 214 gacggaggcgaagctcaaggtggcgatcaacgggttcgggcgcatcgg 261
           |||||| || ||||| ||||| ||||||||||| |||||||| |||||
Sbjct: 199 gacggaagcaaagctgaaggtagcgatcaacggattcgggcgtatcgg 246
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>gb|AC023296.6| Homo sapiens chromosome 8, clone RP11-564K14, complete sequence
          Length = 189532

 Score = 46.1 bits (23), Expect = 0.070
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 70     ccaggggggcatgctggagttct 92
              |||||||||||||||||||||||
Sbjct: 154385 ccaggggggcatgctggagttct 154363
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                        
Query: 236    gcgatcaacgggttcgggcgcatcgggcgcaacttcctgcgg 277
              ||||||||||| ||||| |||||||| |||| | ||||||||
Sbjct: 933500 gcgatcaacggattcggccgcatcggccgcaccatcctgcgg 933459
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>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 239    atcaacgggttcgggcgcatcgggcgcaac 268
              |||||||| ||||| |||||||||||||||
Sbjct: 264340 atcaacggattcggccgcatcgggcgcaac 264311
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>gb|DQ230532.1| Streptomyces sp. Tu6071 phenalinolactone biosynthetic gene cluster,
             complete sequence
          Length = 49461

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 216   cggaggcgaagctcaaggtggc 237
             ||||||||||||||||||||||
Sbjct: 40058 cggaggcgaagctcaaggtggc 40037
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 233     gtggcgatcaacgggttcgggcgcatcgggcgca 266
               |||||||||||||| ||||| |||||||| ||||
Sbjct: 2308628 gtggcgatcaacggcttcggacgcatcggccgca 2308661
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>gb|U44856.1|SAU44856 Streptomyces arenae pentalenolactone-insensitive
           glyceraldehyde-3-phosphate dehydrogenase (gapR) gene,
           complete cds
          Length = 1594

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 239 atcaacgggttcgggcgcatcgggcgcaac 268
           |||||||| |||||||||||||| ||||||
Sbjct: 373 atcaacggcttcgggcgcatcggccgcaac 402
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 298     cagctcgccgctggaggtgatcgcc 322
               |||||||||||||| ||||||||||
Sbjct: 5278875 cagctcgccgctggtggtgatcgcc 5278899
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>gb|AY450985.1| HIV-1 isolate NN92/732 from USA tat protein (tat) gene, partial
           sequence
          Length = 321

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 98  ctgaggagctcgtcgtcgctg 118
           |||||||||||||||||||||
Sbjct: 258 ctgaggagctcgtcgtcgctg 238
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>gb|AY450984.1| HIV-1 isolate NN88/732 from USA tat protein (tat) gene, partial
           sequence
          Length = 321

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 98  ctgaggagctcgtcgtcgctg 118
           |||||||||||||||||||||
Sbjct: 258 ctgaggagctcgtcgtcgctg 238
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 289     gcgcggcgacagctcgccgct 309
               |||||||||||||||||||||
Sbjct: 1843399 gcgcggcgacagctcgccgct 1843379
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>gb|U82749.1|MAU82749 Mycobacterium avium glyceraldehyde-3-phosphate dehydrogenase
           homolog (gapdh) gene, complete cds; and phosphoglycerate
           kinase gene, partial cds
          Length = 2530

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 239 atcaacgggttcgggcgcatcgggcgcaacttc 271
           |||||||| ||||| || |||||||||||||||
Sbjct: 360 atcaacggcttcggtcgaatcgggcgcaacttc 392
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>gb|AE004716.1| Pseudomonas aeruginosa PAO1, section 277 of 529 of the complete
            genome
          Length = 11610

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 298  cagctcgccgctggaggtgatcgcc 322
            |||||||||||||| ||||||||||
Sbjct: 8192 cagctcgccgctggtggtgatcgcc 8216
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 178     cgcggtgagcacgagcggcgg 198
               |||||||||||||||||||||
Sbjct: 1509597 cgcggtgagcacgagcggcgg 1509577
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 239     atcaacgggttcgggcgcatcgggcgcaacttc 271
               |||||||| ||||| || |||||||||||||||
Sbjct: 1221918 atcaacggcttcggtcgaatcgggcgcaacttc 1221950
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 302    tcgccgctggaggtgatcgcc 322
              |||||||||||||||||||||
Sbjct: 118648 tcgccgctggaggtgatcgcc 118628
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>gb|U43999.1|HIVU43999 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 98  ctgaggagctcgtcgtcgctg 118
           |||||||||||||||||||||
Sbjct: 207 ctgaggagctcgtcgtcgctg 187
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>ref|XM_483629.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 528

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 104 agctcgtcgtcgctgccgct 123
           ||||||||||||||||||||
Sbjct: 501 agctcgtcgtcgctgccgct 482
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>gb|AY734209.1| HIV-1 isolate E089BB from USA tat protein (tat) gene, partial cds
          Length = 297

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 211 tgaggagctcgtcgtcgctg 192
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>gb|AY734165.1| HIV-1 isolate E055BB from USA tat protein (tat) gene, partial cds
          Length = 295

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 208 tgaggagctcgtcgtcgctg 189
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>gb|AY734164.1| HIV-1 isolate B055BB from USA tat protein (tat) gene, partial cds
          Length = 292

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 208 tgaggagctcgtcgtcgctg 189
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>gb|AY734163.1| HIV-1 isolate E055AA from USA tat protein (tat) gene, partial cds
          Length = 285

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 198 tgaggagctcgtcgtcgctg 179
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>gb|AY734162.1| HIV-1 isolate B055AA from USA tat protein (tat) gene, partial cds
          Length = 262

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 175 tgaggagctcgtcgtcgctg 156
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 233     gtggcgatcaacgggttcgggcgcatcgggcg 264
               ||||| |||||||| ||||| |||||||||||
Sbjct: 1641330 gtggcaatcaacggcttcggccgcatcgggcg 1641361
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>gb|DQ396398.1| HIV-1 isolate 03ZAPS045MB2 from South Africa, complete genome
          Length = 9031

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   tgaggagctcgtcgtcgctg 118
            ||||||||||||||||||||
Sbjct: 5443 tgaggagctcgtcgtcgctg 5424
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>gb|AY450998.1| HIV-1 isolate SS90/26 from USA tat protein (tat) gene, partial
           sequence
          Length = 321

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 257 tgaggagctcgtcgtcgctg 238
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>gb|AY450969.1| HIV-1 isolate AE96/999260 from USA tat protein (tat) gene, partial
           sequence
          Length = 321

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 257 tgaggagctcgtcgtcgctg 238
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 239     atcaacgggttcgggcgcatcgggcgca 266
               |||||||| ||||| |||||||||||||
Sbjct: 3113498 atcaacggcttcggccgcatcgggcgca 3113471
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>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16
          Length = 349876

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     tgctggagttctccgggctg 100
              ||||||||||||||||||||
Sbjct: 180213 tgctggagttctccgggctg 180232
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>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12
          Length = 348934

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    tgctggagttctccgggctg 100
             ||||||||||||||||||||
Sbjct: 13755 tgctggagttctccgggctg 13774
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>gb|L81176.2|PSEFLAOP Pseudomonas aeruginosa flagellin (fliC) gene, partial cds; FlaG
            (flaG), flagellar cap (fliD), FliS (fliS), and FleQ
            (fleQ) genes, complete cds; and unknown genes
          Length = 5735

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 205  gaaggcgccgacggaggcgaagctcaag 232
            ||||||||||| ||||||| ||||||||
Sbjct: 1406 gaaggcgccgaaggaggcgcagctcaag 1433
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>gb|DQ270258.1| Cyanophora paradoxa glyceraldehyde-3-phosphate dehydrogenase
           subunit A (gapA) mRNA, complete cds
          Length = 1442

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 240 tcaacgggttcgggcgcatcgggcgcaacttc 271
           ||||||| ||||||||||| || |||||||||
Sbjct: 245 tcaacggcttcgggcgcattggccgcaacttc 276
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>gb|AF408629.1| HIV-1 isolate A32879 from Argentina, complete genome
          Length = 9192

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   tgaggagctcgtcgtcgctg 118
            ||||||||||||||||||||
Sbjct: 5575 tgaggagctcgtcgtcgctg 5556
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>gb|AY713412.1| HIV-1 isolate 90US_873 from USA gag protein (gag) and pol protein
            (pol) genes, partial cds; and vif protein (vif), vpr
            protein (vpr), tat protein (tat), rev protein (rev), vpu
            protein (vpu), envelope glycoprotein (env), and nef
            protein (nef) genes, complete cds
          Length = 8791

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   tgaggagctcgtcgtcgctg 118
            ||||||||||||||||||||
Sbjct: 5210 tgaggagctcgtcgtcgctg 5191
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 104      agctcgtcgtcgctgccgct 123
                ||||||||||||||||||||
Sbjct: 27356053 agctcgtcgtcgctgccgct 27356034
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>gb|AF326484.1|AF326484 Zea mays NOD26-like membrane integral protein ZmNIP2-1 mRNA,
           complete cds
          Length = 1293

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 73  ggggggcatgctggagttct 92
           ||||||||||||||||||||
Sbjct: 282 ggggggcatgctggagttct 263
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>gb|AY857182.2| HIV-1 isolate 9762120 from Australia, partial genome
          Length = 8415

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   tgaggagctcgtcgtcgctg 118
            ||||||||||||||||||||
Sbjct: 4843 tgaggagctcgtcgtcgctg 4824
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>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1323_A06
          Length = 95665

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   agctcgtcgtcgctgccgct 123
             ||||||||||||||||||||
Sbjct: 57580 agctcgtcgtcgctgccgct 57561
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>gb|AF139825.1|AF139825 Pseudomonas aeruginosa strain PA103 flagellar cap protein FliD
           (fliD) and FliS (fliS) genes, complete cds
          Length = 2047

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 205 gaaggcgccgacggaggcgaagctcaag 232
           ||||||||||| ||||||| ||||||||
Sbjct: 221 gaaggcgccgaaggaggcgcagctcaag 248
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>gb|AF139824.1|AF139824 Pseudomonas aeruginosa strain PAK flagellar cap protein FliD (fliD)
           and FliS (fliS) genes, complete cds
          Length = 2095

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 205 gaaggcgccgacggaggcgaagctcaag 232
           ||||||||||| ||||||| ||||||||
Sbjct: 242 gaaggcgccgaaggaggcgcagctcaag 269
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>gb|AF139823.1|AF139823 Pseudomonas aeruginosa strain cs2 flagellar cap protein FliD (fliD)
           and FliS (fliS) genes, complete cds
          Length = 2049

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 205 gaaggcgccgacggaggcgaagctcaag 232
           ||||||||||| ||||||| ||||||||
Sbjct: 222 gaaggcgccgaaggaggcgcagctcaag 249
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>gb|AF139822.1|AF139822 Pseudomonas aeruginosa strain cs32 flagellar cap protein FliD
           (fliD) and FliS (fliS) genes, complete cds
          Length = 2053

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 205 gaaggcgccgacggaggcgaagctcaag 232
           ||||||||||| ||||||| ||||||||
Sbjct: 222 gaaggcgccgaaggaggcgcagctcaag 249
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 239     atcaacgggttcgggcgcatcgggcgca 266
               |||||||| ||||| |||||||||||||
Sbjct: 2960727 atcaacggcttcggccgcatcgggcgca 2960700
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>gb|AF162198.1|AF162198 Lactuca sativa NADP-dependent glyceraldehyde phosphate
           dehydrogenase mRNA, partial cds
          Length = 447

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 230 aaggtggcgatcaacgggttcgggcgcatcgg 261
           ||||| ||||||||||| |||||||| |||||
Sbjct: 312 aaggtagcgatcaacggattcgggcgtatcgg 343
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>gb|AY835778.1| HIV-1 isolate 5018-86 clone pbf6 from USA, complete genome
          Length = 9703

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   tgaggagctcgtcgtcgctg 118
            ||||||||||||||||||||
Sbjct: 6008 tgaggagctcgtcgtcgctg 5989
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>gb|AY835777.1| HIV-1 isolate 5018-83 clone pbf4 from USA, complete genome
          Length = 9703

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   tgaggagctcgtcgtcgctg 118
            ||||||||||||||||||||
Sbjct: 6008 tgaggagctcgtcgtcgctg 5989
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>gb|U80572.1|HIVU80572 HIV-1 patient TPVIII, sample 1995, tat protein (tat) gene, partial
           cds
          Length = 216

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 179 tgaggagctcgtcgtcgctg 160
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>gb|U80555.1|HIVU80555 HIV-1 patient LTS16, sample 1995, tat protein (tat) gene, partial
           cds
          Length = 216

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 179 tgaggagctcgtcgtcgctg 160
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>gb|AF000525.1|AF000525 HIV-1 strain CH94-A2tat from USA, Tat protein (tat) gene, partial
           cds
          Length = 219

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 179 tgaggagctcgtcgtcgctg 160
to top
>gb|AF000522.1|AF000522 HIV-1 strain AD93-A3tat from USA, Tat protein (tat) gene, partial
           cds
          Length = 219

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 179 tgaggagctcgtcgtcgctg 160
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>gb|U44018.1|HIVU44018 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U44017.1|HIVU44017 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
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>gb|U44012.1|HIVU44012 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U44011.1|HIVU44011 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
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>gb|U44009.1|HIVU44009 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U44008.1|HIVU44008 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
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>gb|U44002.1|HIVU44002 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
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>gb|U44001.1|HIVU44001 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
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>gb|U44000.1|HIVU44000 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U43998.1|HIVU43998 Human immunodeficiency virus type 1 tat mRNA, partial cds
          Length = 243

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 206 tgaggagctcgtcgtcgctg 187
to top
>gb|U80472.1|HIVU80472 HIV-1 patient VE12 from Venezuela, sample 1995, tat protein (tat)
           gene, partial cds
          Length = 216

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 99  tgaggagctcgtcgtcgctg 118
           ||||||||||||||||||||
Sbjct: 179 tgaggagctcgtcgtcgctg 160
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>dbj|D21159.1|RICASP1 Rice Osg4B gene for anther specific protein, complete cds (exon1,
           exon2)
          Length = 2429

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 104 agctcgtcgtcgctgccgct 123
           ||||||||||||||||||||
Sbjct: 704 agctcgtcgtcgctgccgct 685


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,941,276
Number of Sequences: 3902068
Number of extensions: 1941276
Number of successful extensions: 36343
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 35345
Number of HSP's gapped (non-prelim): 997
length of query: 329
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 307
effective length of database: 17,147,199,772
effective search space: 5264190330004
effective search space used: 5264190330004
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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