ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet102d01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC127678.9| Mus musculus BAC clone RP24-233M12 from chromosom... 46 0.022
2gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome 42 0.35
3ref|XM_382050.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 42 0.35
4emb|AL596247.22| Human DNA sequence from clone RP11-417O11 on ch... 42 0.35
5gb|AC125163.5| Mus musculus BAC clone RP24-421J9 from chromosome... 40 1.4
6gb|AC004414.1| Homo sapiens PAC clone RP4-724E13 from 7, complet... 40 1.4
7gb|AC146208.2| Pan troglodytes BAC clone RP43-34A11 from 7, comp... 40 1.4
8emb|AL591946.14| Mouse DNA sequence from clone RP23-290M7 on chr... 40 1.4
9gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 38 5.4
10gb|AC008348.5| Drosophila melanogaster clone BACR02I11, complete... 38 5.4
11gb|AC138376.11| Mus musculus chromosome 7, clone RP23-53O7, comp... 38 5.4
12ref|XM_419258.1| PREDICTED: Gallus gallus similar to kinesin fam... 38 5.4
13ref|XM_582505.2| PREDICTED: Bos taurus similar to hypothetical g... 38 5.4
14gb|AC127028.18| Mus musculus chromosome 18, clone RP23-345J21, c... 38 5.4
15ref|XM_540829.2| PREDICTED: Canis familiaris similar to zinc fin... 38 5.4
16emb|CT025638.1| Pan troglodytes chromosome X clone PTB-083N09 ma... 38 5.4
17gb|AC121786.3| Mus musculus BAC clone RP23-387F9 from chromosome... 38 5.4
18gb|AC111137.10| Mus musculus chromosome 5, clone RP23-357C4, com... 38 5.4
19gb|AC117635.6| Mus musculus chromosome 12, clone RP23-203G2, com... 38 5.4
20gb|AC166543.2| Nectria haematococca clone JGIAYWI-5I13, complete... 38 5.4
21emb|AL360006.15| Human DNA sequence from clone RP11-528D17 on ch... 38 5.4
22gb|AC123178.4| Rattus norvegicus 7 BAC CH230-20I17 (Children's H... 38 5.4
23gb|AC157360.9| Mus musculus chromosome 8, clone RP23-420E22, com... 38 5.4
24gb|AC087500.16| Homo sapiens chromosome 17, clone RP11-333E1, co... 38 5.4
25gb|AC016773.8| Homo sapiens BAC clone RP11-572O17 from 4, comple... 38 5.4
26emb|CR386576.1| Gallus gallus finished cDNA, clone ChEST899p12 38 5.4
27dbj|AK038102.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 38 5.4
28gb|AF170801.5| Homo sapiens chromosome 8 clone CTA-392B3 map p23... 38 5.4
29gb|AC103776.3| Homo sapiens chromosome 8, clone RP11-42O14, comp... 38 5.4
30gb|AC005840.2|AC005840 Homo sapiens complete sequence of a PAC c... 38 5.4
31dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 38 5.4
32gb|AC019257.3| Homo sapiens chromosome 8, clone RP11-439C15, com... 38 5.4
33gb|AC006064.10| Homo sapiens 12 PAC RP5-940J5 (Roswell Park Canc... 38 5.4
34ref|XM_579974.1| PREDICTED: Rattus norvegicus LOC499526 (LOC4995... 38 5.4
35dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 38 5.4
36dbj|AK119740.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 5.4
37gb|AC138388.3| Mus musculus BAC clone RP23-455J6 from 10, comple... 38 5.4
38gb|AE003457.4| Drosophila melanogaster chromosome 2R, section 65... 38 5.4
39gb|AC111107.18| Mus musculus chromosome 5, clone RP23-195P3, com... 38 5.4
40gb|AE015451.1| Pseudomonas putida KT2440 complete genome 38 5.4
41emb|AL929079.14| Mouse DNA sequence from clone RP23-387F9 on chr... 38 5.4
42gb|AE017221.1| Thermus thermophilus HB27, complete genome 38 5.4
43gb|AC004252.1|AC004252 Drosophila melanogaster (P1 DS09121 (D88)... 38 5.4
44emb|BX897747.8| Zebrafish DNA sequence from clone DKEY-187J14 in... 38 5.4
45gb|M36196.1|HUMSYB1A1 Human synaptobrevin 1 (SYB1) gene, exon 1 38 5.4
46gb|AC015720.20| Homo sapiens chromosome 15, clone RP11-151H2, co... 38 5.4 
>gb|AC127678.9| Mus musculus BAC clone RP24-233M12 from chromosome 18, complete
             sequence
          Length = 157430

 Score = 46.1 bits (23), Expect = 0.022
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 20    tggcctccaatggcctctccacc 42
             |||||||||||||||||||||||
Sbjct: 45288 tggcctccaatggcctctccacc 45266
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>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 42.1 bits (21), Expect = 0.35
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 75      tcctcctgctgccccctggca 95
               |||||||||||||||||||||
Sbjct: 1645291 tcctcctgctgccccctggca 1645311
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>ref|XM_382050.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01874.1)
            partial mRNA
          Length = 3585

 Score = 42.1 bits (21), Expect = 0.35
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 69   tagccctcctcctgctgcccc 89
            |||||||||||||||||||||
Sbjct: 1301 tagccctcctcctgctgcccc 1281
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>emb|AL596247.22| Human DNA sequence from clone RP11-417O11 on chromosome 10 Contains the
             5' end of the CAMK2G gene for calcium/calmodulin-dependent
             protein kinase (CaM kinase) II gamma, the PLAU gene for
             plasminogen activator urokinase, three novel genes
             (FLJ35198), the 5' end of the VCL gene for vinculin and
             three CpG islands, complete sequence
          Length = 228098

 Score = 42.1 bits (21), Expect = 0.35
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 74    ctcctcctgctgccccctggc 94
             |||||||||||||||||||||
Sbjct: 29813 ctcctcctgctgccccctggc 29793
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>gb|AC125163.5| Mus musculus BAC clone RP24-421J9 from chromosome 1, complete sequence
          Length = 184034

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    agccctcctcctgctgcccc 89
             ||||||||||||||||||||
Sbjct: 79242 agccctcctcctgctgcccc 79223
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>gb|AC004414.1| Homo sapiens PAC clone RP4-724E13 from 7, complete sequence
          Length = 115045

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    agccctcctcctgctgcccc 89
             ||||||||||||||||||||
Sbjct: 86757 agccctcctcctgctgcccc 86738
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>gb|AC146208.2| Pan troglodytes BAC clone RP43-34A11 from 7, complete sequence
          Length = 169225

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     agccctcctcctgctgcccc 89
              ||||||||||||||||||||
Sbjct: 151553 agccctcctcctgctgcccc 151572
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>emb|AL591946.14| Mouse DNA sequence from clone RP23-290M7 on chromosome 15, complete
             sequence
          Length = 188892

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    ccctcctcctgctgccccct 91
             ||||||||||||||||||||
Sbjct: 54156 ccctcctcctgctgccccct 54175
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 98      gcctccggcgccgcgtcgg 116
               |||||||||||||||||||
Sbjct: 3009859 gcctccggcgccgcgtcgg 3009877
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>gb|AC008348.5| Drosophila melanogaster clone BACR02I11, complete sequence
          Length = 191467

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 61    cctgctcctagccctcctcctgc 83
             ||||||||| |||||||||||||
Sbjct: 61656 cctgctcctggccctcctcctgc 61678
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>gb|AC138376.11| Mus musculus chromosome 7, clone RP23-53O7, complete sequence
          Length = 247484

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 61    cctgctcctagccctcctc 79
             |||||||||||||||||||
Sbjct: 28946 cctgctcctagccctcctc 28928
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>ref|XM_419258.1| PREDICTED: Gallus gallus similar to kinesin family member 21B; N-5
            kinesin (LOC421178), mRNA
          Length = 5493

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 71   gccctcctcctgctgcccc 89
            |||||||||||||||||||
Sbjct: 1728 gccctcctcctgctgcccc 1710
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>ref|XM_582505.2| PREDICTED: Bos taurus similar to hypothetical gene supported by
           AK075558; BC021286 (LOC506110), mRNA
          Length = 1176

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 62  ctgctcctagccctcctcctgct 84
           |||||||| ||||||||||||||
Sbjct: 166 ctgctcctcgccctcctcctgct 188
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>gb|AC127028.18| Mus musculus chromosome 18, clone RP23-345J21, complete sequence
          Length = 191473

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 53     ctcaccgccctgctcctag 71
              |||||||||||||||||||
Sbjct: 146540 ctcaccgccctgctcctag 146558
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>ref|XM_540829.2| PREDICTED: Canis familiaris similar to zinc finger, DHHC domain
           containing 24 (LOC483708), mRNA
          Length = 895

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 70  agccctcctcctgctgccc 88
           |||||||||||||||||||
Sbjct: 562 agccctcctcctgctgccc 580
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>emb|CT025638.1| Pan troglodytes chromosome X clone PTB-083N09 map Xq28, complete
             sequence
          Length = 189430

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 22    gcctccaatggcctctcca 40
             |||||||||||||||||||
Sbjct: 21398 gcctccaatggcctctcca 21380
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>gb|AC121786.3| Mus musculus BAC clone RP23-387F9 from chromosome 2, complete sequence
          Length = 208632

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 73     cctcctcctgctgccccct 91
              |||||||||||||||||||
Sbjct: 138576 cctcctcctgctgccccct 138594
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>gb|AC111137.10| Mus musculus chromosome 5, clone RP23-357C4, complete sequence
          Length = 197271

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 63    tgctcctagccctcctcct 81
             |||||||||||||||||||
Sbjct: 13530 tgctcctagccctcctcct 13548
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>gb|AC117635.6| Mus musculus chromosome 12, clone RP23-203G2, complete sequence
          Length = 270063

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 73    cctcctcctgctgccccct 91
             |||||||||||||||||||
Sbjct: 78968 cctcctcctgctgccccct 78986
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>gb|AC166543.2| Nectria haematococca clone JGIAYWI-5I13, complete sequence
          Length = 40607

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 58   cgccctgctcctagccctc 76
            |||||||||||||||||||
Sbjct: 4434 cgccctgctcctagccctc 4416
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>emb|AL360006.15| Human DNA sequence from clone RP11-528D17 on chromosome 1, complete
             sequence
          Length = 113420

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 72    ccctcctcctgctgccccctggc 94
             |||||||||| ||||||||||||
Sbjct: 12969 ccctcctcctcctgccccctggc 12947
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>gb|AC123178.4| Rattus norvegicus 7 BAC CH230-20I17 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 221236

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 66     tcctagccctcctcctgct 84
              |||||||||||||||||||
Sbjct: 144985 tcctagccctcctcctgct 144967
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>gb|AC157360.9| Mus musculus chromosome 8, clone RP23-420E22, complete sequence
          Length = 195633

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    tggcctccaatggcctctc 38
             |||||||||||||||||||
Sbjct: 54576 tggcctccaatggcctctc 54594
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>gb|AC087500.16| Homo sapiens chromosome 17, clone RP11-333E1, complete sequence
          Length = 170770

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 20    tggcctccaatggcctctc 38
             |||||||||||||||||||
Sbjct: 64187 tggcctccaatggcctctc 64169
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>gb|AC016773.8| Homo sapiens BAC clone RP11-572O17 from 4, complete sequence
          Length = 189223

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 77   ctcctgctgccccctggcaatgcctcc 103
            |||||||||||||||||| | ||||||
Sbjct: 5856 ctcctgctgccccctggccaggcctcc 5830
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>emb|CR386576.1| Gallus gallus finished cDNA, clone ChEST899p12
          Length = 954

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 74  ctcctcctgctgccccctggcaa 96
           |||||||||||||| ||||||||
Sbjct: 862 ctcctcctgctgccacctggcaa 884
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>dbj|AK038102.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
           enriched library, clone:A130079C18
           product:unclassifiable, full insert sequence
          Length = 3564

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 73  cctcctcctgctgccccct 91
           |||||||||||||||||||
Sbjct: 827 cctcctcctgctgccccct 845
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>gb|AF170801.5| Homo sapiens chromosome 8 clone CTA-392B3 map p23, complete sequence
          Length = 131992

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 60    ccctgctcctagccctcctcctg 82
             |||||||||| ||||||||||||
Sbjct: 29169 ccctgctcctcgccctcctcctg 29147
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>gb|AC103776.3| Homo sapiens chromosome 8, clone RP11-42O14, complete sequence
          Length = 165995

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 60    ccctgctcctagccctcctcctg 82
             |||||||||| ||||||||||||
Sbjct: 32141 ccctgctcctcgccctcctcctg 32119
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>gb|AC005840.2|AC005840 Homo sapiens complete sequence of a PAC clone RP1-102E24 containing
             SYB1, CD27, and SCNN1A genes
          Length = 140026

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 35    tctccaccccgccccgtcc 53
             |||||||||||||||||||
Sbjct: 13809 tctccaccccgccccgtcc 13827
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                          
Query: 42      cccgccccgtcctcaccgccctgctcc 68
               |||||| ||||||||||| ||||||||
Sbjct: 3775739 cccgccgcgtcctcaccggcctgctcc 3775713
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>gb|AC019257.3| Homo sapiens chromosome 8, clone RP11-439C15, complete sequence
          Length = 220201

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 60    ccctgctcctagccctcctcctg 82
             |||||||||| ||||||||||||
Sbjct: 73890 ccctgctcctcgccctcctcctg 73912
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>gb|AC006064.10| Homo sapiens 12 PAC RP5-940J5 (Roswell Park Cancer Institute Human PAC
             Library) complete sequence
          Length = 172571

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 35    tctccaccccgccccgtcc 53
             |||||||||||||||||||
Sbjct: 28000 tctccaccccgccccgtcc 27982
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>ref|XM_579974.1| PREDICTED: Rattus norvegicus LOC499526 (LOC499526), mRNA
          Length = 2218

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 71   gccctcctcctgctgcccc 89
            |||||||||||||||||||
Sbjct: 987  gccctcctcctgctgcccc 1005
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 45     gccccgtcctcaccgccct 63
              |||||||||||||||||||
Sbjct: 933199 gccccgtcctcaccgccct 933181
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>dbj|AK119740.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-F06, full
            insert sequence
          Length = 4317

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 70   agccctcctcctgctgccc 88
            |||||||||||||||||||
Sbjct: 1377 agccctcctcctgctgccc 1395
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>gb|AC138388.3| Mus musculus BAC clone RP23-455J6 from 10, complete sequence
          Length = 164600

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 75     tcctcctgctgccccctgg 93
              |||||||||||||||||||
Sbjct: 118129 tcctcctgctgccccctgg 118147
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>gb|AE003457.4| Drosophila melanogaster chromosome 2R, section 65 of 73 of the
            complete sequence
          Length = 307324

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 61   cctgctcctagccctcctcctgc 83
            ||||||||| |||||||||||||
Sbjct: 2955 cctgctcctggccctcctcctgc 2977
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>gb|AC111107.18| Mus musculus chromosome 5, clone RP23-195P3, complete sequence
          Length = 203785

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 63     tgctcctagccctcctcct 81
              |||||||||||||||||||
Sbjct: 163552 tgctcctagccctcctcct 163570
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 80     ctgctgccccctggcaatg 98
              |||||||||||||||||||
Sbjct: 671778 ctgctgccccctggcaatg 671796
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>emb|AL929079.14| Mouse DNA sequence from clone RP23-387F9 on chromosome 2, complete
             sequence
          Length = 120316

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 73    cctcctcctgctgccccct 91
             |||||||||||||||||||
Sbjct: 35913 cctcctcctgctgccccct 35895
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 45     gccccgtcctcaccgccct 63
              |||||||||||||||||||
Sbjct: 607902 gccccgtcctcaccgccct 607884
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>gb|AC004252.1|AC004252 Drosophila melanogaster (P1 DS09121 (D88)) DNA sequence, complete
            sequence
          Length = 59498

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 61   cctgctcctagccctcctcctgc 83
            ||||||||| |||||||||||||
Sbjct: 5002 cctgctcctggccctcctcctgc 4980
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>emb|BX897747.8| Zebrafish DNA sequence from clone DKEY-187J14 in linkage group 14,
             complete sequence
          Length = 217125

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 72    ccctcctcctgctgccccc 90
             |||||||||||||||||||
Sbjct: 95749 ccctcctcctgctgccccc 95767



 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 72    ccctcctcctgctgccccc 90
             |||||||||||||||||||
Sbjct: 95560 ccctcctcctgctgccccc 95578
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>gb|M36196.1|HUMSYB1A1 Human synaptobrevin 1 (SYB1) gene, exon 1
          Length = 727

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 35  tctccaccccgccccgtcc 53
           |||||||||||||||||||
Sbjct: 318 tctccaccccgccccgtcc 336
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>gb|AC015720.20| Homo sapiens chromosome 15, clone RP11-151H2, complete sequence
          Length = 174559

 Score = 38.2 bits (19), Expect = 5.4
 Identities = 29/31 (93%), Gaps = 1/31 (3%)
 Strand = Plus / Minus

                                            
Query: 33    cctctccaccccgccccgtcc-tcaccgccc 62
             |||| |||||||||||||||| |||||||||
Sbjct: 31532 cctcgccaccccgccccgtccttcaccgccc 31502


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 964,829
Number of Sequences: 3902068
Number of extensions: 964829
Number of successful extensions: 83776
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 83243
Number of HSP's gapped (non-prelim): 534
length of query: 118
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 97
effective length of database: 17,151,101,840
effective search space: 1663656878480
effective search space used: 1663656878480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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