>gb|AC168049.2| Mus musculus BAC clone RP23-246L6 from chromosome 10, complete sequence
          Length = 229657

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 73     tgcttcttccccttccttcccactcc 98
              |||||||| |||||||||||||||||
Sbjct: 184021 tgcttctttcccttccttcccactcc 183996

>gb|AC162939.6| Mus musculus BAC clone RP23-97G12 from chromosome 10, complete sequence
          Length = 247228

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 73    tgcttcttccccttccttcccactcc 98
             |||||||| |||||||||||||||||
Sbjct: 96698 tgcttctttcccttccttcccactcc 96673

>gb|AC005053.2| Homo sapiens BAC clone CTB-41D11 from 7, complete sequence
          Length = 120952

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 66     tccattctgcttcttccccttcctt 90
              ||||||||||||| |||||||||||
Sbjct: 117558 tccattctgcttcctccccttcctt 117534

>gb|AC182713.2| Populus trichocarpa clone Pop1-86K12, complete sequence
          Length = 33839

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 35    ctagctcgctcgctcgcccgcacacccgc 63
             ||||||||||||||||| ||| |||||||
Sbjct: 15995 ctagctcgctcgctcgctcgctcacccgc 16023

>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete
              sequence
          Length = 135510

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 74     gcttcttccccttccttccca 94
              |||||||||||||||||||||
Sbjct: 125838 gcttcttccccttccttccca 125858

>ref|NM_171822.2| Caenorhabditis elegans H18N23.2b (H18N23.2) mRNA, complete cds
          Length = 2206

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 78   cttccccttccttcccactcc 98
            |||||||||||||||||||||
Sbjct: 2112 cttccccttccttcccactcc 2132

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 74       gcttcttccccttccttccca 94
                |||||||||||||||||||||
Sbjct: 21208521 gcttcttccccttccttccca 21208501

>gb|AC006660.1| Caenorhabditis elegans fosmid H18N23, complete sequence
          Length = 8839

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 78   cttccccttccttcccactcc 98
            |||||||||||||||||||||
Sbjct: 3116 cttccccttccttcccactcc 3096

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 74       gcttcttccccttccttccca 94
                |||||||||||||||||||||
Sbjct: 21219785 gcttcttccccttccttccca 21219765

>emb|AL606933.4| Mouse DNA sequence from clone RP23-168M5 on chromosome 4, complete
              sequence
          Length = 197552

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 72     ctgcttcttccccttccttcc 92
              |||||||||||||||||||||
Sbjct: 143912 ctgcttcttccccttccttcc 143932

>gb|AC161194.14| Mus musculus chromosome 15, clone RP23-345C13, complete sequence
          Length = 193998

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 73     tgcttcttccccttccttcc 92
              ||||||||||||||||||||
Sbjct: 118008 tgcttcttccccttccttcc 117989

>gb|AY022155.1| Oryza sativa microsatellite MRG4480 containing (TC)X21, genomic
           sequence
          Length = 242

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 38  gctcgctcgctcgcccgcac 57
           ||||||||||||||||||||
Sbjct: 193 gctcgctcgctcgcccgcac 174

>gb|AC149235.1| Pan troglodytes chromosome X clone PTB-100E10 map human ortholog q28,
              complete sequence
          Length = 183411

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     attctgcttcttccccttcc 88
              ||||||||||||||||||||
Sbjct: 174110 attctgcttcttccccttcc 174129

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 38      gctcgctcgctcgcccgcac 57
               ||||||||||||||||||||
Sbjct: 5306999 gctcgctcgctcgcccgcac 5306980

>gb|AC125234.4| Mus musculus BAC clone RP23-14K16 from 13, complete sequence
          Length = 209715

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 75    cttcttccccttccttcccactcc 98
             |||||||||||||||||| |||||
Sbjct: 60457 cttcttccccttccttcctactcc 60480

>gb|AC146702.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0009J13, from chromosome 3, complete sequence
          Length = 147205

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    gctcgctcgctcgcccgcac 57
             ||||||||||||||||||||
Sbjct: 13167 gctcgctcgctcgcccgcac 13148

>gb|AC146581.1| Oryza sativa (japonica cultivar-group) Nipponbare strain chromosome 3
              clone OSJNBa0021H20, complete sequence
          Length = 133079

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 38     gctcgctcgctcgcccgcac 57
              ||||||||||||||||||||
Sbjct: 130401 gctcgctcgctcgcccgcac 130382

>gb|AC158296.6| Mus musculus chromosome 7, clone RP24-78M9, complete sequence
          Length = 201897

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     ttctgcttcttccccttcct 89
              ||||||||||||||||||||
Sbjct: 157584 ttctgcttcttccccttcct 157603

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 38      gctcgctcgctcgcccgcac 57
               ||||||||||||||||||||
Sbjct: 5306214 gctcgctcgctcgcccgcac 5306195

>emb|AL929555.20| Mouse DNA sequence from clone RP24-427F7 on chromosome 2, complete
             sequence
          Length = 155137

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 75    cttcttccccttccttcccactcc 98
             |||||||||||||||| |||||||
Sbjct: 79252 cttcttccccttcctttccactcc 79275

>gb|AC002523.1|AC002523 Homo sapiens Xq28 BACs 360 F12, GSHB-555C13, complete sequence
          Length = 228516

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    attctgcttcttccccttcc 88
             ||||||||||||||||||||
Sbjct: 64313 attctgcttcttccccttcc 64332

>gb|AC101874.8| Mus musculus chromosome 7, clone RP23-366A20, complete sequence
          Length = 179708

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    ttctgcttcttccccttcct 89
             ||||||||||||||||||||
Sbjct: 45182 ttctgcttcttccccttcct 45163

>dbj|AP002492.3| Homo sapiens genomic DNA, chromosome 11q clone:CTD-2172L23, complete
            sequence
          Length = 52000

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 68   cattctgcttcttccccttccttcccac 95
            ||||||||||| | ||||||||||||||
Sbjct: 3175 cattctgcttccttcccttccttcccac 3148

>emb|CT737164.2| Pan troglodytes chromosome X clone CH251-22G18 map Xq28, complete
             sequence
          Length = 159876

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    attctgcttcttccccttcc 88
             ||||||||||||||||||||
Sbjct: 70919 attctgcttcttccccttcc 70938

>gb|AC148012.5| Mus musculus BAC clone RP23-174D18 from 18, complete sequence
          Length = 226568

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 73    tgcttcttccccttccttcccact 96
             |||||||||||||||||| |||||
Sbjct: 70182 tgcttcttccccttccttgccact 70205


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,218,126
Number of Sequences: 3902068
Number of extensions: 1218126
Number of successful extensions: 102147
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 101848
Number of HSP's gapped (non-prelim): 296
length of query: 220
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 198
effective length of database: 17,147,199,772
effective search space: 3395145554856
effective search space used: 3395145554856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)