ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baet101g09 |
|---|---|
| Clone Library Name | barley_pub |
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 65.9 bits (159), Expect = 6e-11 Identities = 39/104 (37%), Positives = 58/104 (55%), Gaps = 3/104 (2%) Frame = +1 Query: 166 RLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLP-GRPTGRFTNGYNLADVISQRL 342 + + AV+ FGDS+ D GNN+ L RPYGMD P G TGRF+NG +D IS+ L Sbjct: 121 KTIPAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYL 180 Query: 343 GFEMSPKPYL--SMLPHDKILLGLCKIGANYASGGSGILDTTGK 468 G + Y+ + ++++ G ++ASGG+G L T + Sbjct: 181 GVKEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQTSE 224
>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor| Length = 534 Score = 62.4 bits (150), Expect = 6e-10 Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 3/104 (2%) Frame = +1 Query: 166 RLVNAVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGR-PTGRFTNGYNLADVISQRL 342 + + AV+ FGDS+ D GNN+ L RPYGMD R TGRF+NG +D +++ + Sbjct: 200 KTIPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYM 259 Query: 343 GFEMSPKPYL--SMLPHDKILLGLCKIGANYASGGSGILDTTGK 468 G + YL + P+D + G ++ASGG+G TT + Sbjct: 260 GVKEIVPAYLDPKIQPNDLL------TGVSFASGGAGYNPTTSE 297
>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)| (Alpha-L-fucoside fucohydrolase 2) (Alpha-1,2-fucosidase) (AtFXG1) Length = 372 Score = 43.1 bits (100), Expect = 4e-04 Identities = 33/91 (36%), Positives = 45/91 (49%) Frame = +1 Query: 178 AVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYNLADVISQRLGFEMS 357 A++ FGDS D G L A +A P+G G P GR+ +G + D I++ LG Sbjct: 30 AIFNFGDSNSDTGG---LSAAFGQAGPPHGSSFFGSPAGRYCDGRLVIDFIAESLGL--- 83 Query: 358 PKPYLSMLPHDKILLGLCKIGANYASGGSGI 450 PYLS D + GAN+A+ GS I Sbjct: 84 --PYLSAF-LDSVGSNFSH-GANFATAGSPI 110
>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific| protein homolog) (Latex allergen Hev b 13) Length = 391 Score = 41.2 bits (95), Expect = 0.001 Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 1/96 (1%) Frame = +1 Query: 178 AVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYNLADVISQRLGFEMS 357 A++ FGDS D G P N PYG R TGR+++G + D I++ Sbjct: 34 AIFNFGDSNSDTGGKAAAFYPL---NPPYGETFFHRSTGRYSDGRLIIDFIAESFNL--- 87 Query: 358 PKPYLSMLPHDKILLGLCKIGANYASGGSGI-LDTT 462 PYLS P+ L K GA++A+ GS I L TT Sbjct: 88 --PYLS--PYLSSLGSNFKHGADFATAGSTIKLPTT 119
>LIP1_PHOLU (P40601) Lipase 1 precursor (EC 3.1.1.3) (Triacylglycerol lipase)| Length = 645 Score = 33.1 bits (74), Expect = 0.40 Identities = 33/95 (34%), Positives = 39/95 (41%), Gaps = 5/95 (5%) Frame = +1 Query: 175 NAVYVFGDSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNG-----YNLADVISQR 339 N +YVFGDSL D GNN GR T NG YN D I+Q+ Sbjct: 26 NNLYVFGDSLSDGGNN-------------------GRYTVDGINGTESKLYN--DFIAQQ 64 Query: 340 LGFEMSPKPYLSMLPHDKILLGLCKIGANYASGGS 444 LG E L+ K G NYA+GG+ Sbjct: 65 LGIE---------------LVNSKKGGTNYAAGGA 84
>STK36_MOUSE (Q69ZM6) Serine/threonine-protein kinase 36 (EC 2.7.11.1) (Fused| homolog) Length = 1268 Score = 32.7 bits (73), Expect = 0.53 Identities = 14/24 (58%), Positives = 16/24 (66%) Frame = +2 Query: 23 PLPLASYHSHSESLQQRPWRGALL 94 PL L Y S S+QQ+PW GALL Sbjct: 470 PLSLLRYSQESSSIQQQPWYGALL 493
>HIS8_METAC (Q8TUE9) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 367 Score = 30.8 bits (68), Expect = 2.0 Identities = 22/73 (30%), Positives = 36/73 (49%) Frame = +1 Query: 199 SLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYNLADVISQRLGFEMSPKPYLSM 378 S++ +G+N+ P+P+A R PG + L +V+S+ GF +S S Sbjct: 39 SIIKLGSNENPLGPSPKAVRALVETAPGANIYPSADARELREVLSKYTGFPVS-NIVASG 97 Query: 379 LPHDKILLGLCKI 417 D +L GLC+I Sbjct: 98 PGMDGLLDGLCRI 110
>HIS8_METMA (Q8PX17) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 368 Score = 29.6 bits (65), Expect = 4.4 Identities = 20/74 (27%), Positives = 37/74 (50%) Frame = +1 Query: 196 DSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYNLADVISQRLGFEMSPKPYLS 375 +S++ +G+N+ P+P+A + PG + + L + +S+ GF +S S Sbjct: 39 ESIIKLGSNENPLGPSPKAVKALIEAAPGANIYPSADAHELREALSKYTGFPVS-NIVAS 97 Query: 376 MLPHDKILLGLCKI 417 D +L GLC+I Sbjct: 98 GPGMDGLLDGLCRI 111
>KLF17_HUMAN (Q5JT82) Krueppel-like factor 17 (Zinc finger protein 393)| Length = 389 Score = 28.9 bits (63), Expect = 7.6 Identities = 23/71 (32%), Positives = 32/71 (45%) Frame = +1 Query: 193 GDSLVDVGNNDYLPAPAPRANRPYGMDLPGRPTGRFTNGYNLADVISQRLGFEMSPKPYL 372 G L+ VG + PR RP+G +L P G + ++S G P P L Sbjct: 129 GPQLMPVGEPNI-----PRVARPFGGNLRMPPNGLPVSASTGIPIMSHT-GNPPVPYPGL 182 Query: 373 SMLPHDKILLG 405 S +P D+ LLG Sbjct: 183 STVPSDETLLG 193
>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2| Length = 969 Score = 28.9 bits (63), Expect = 7.6 Identities = 13/26 (50%), Positives = 13/26 (50%) Frame = +1 Query: 211 VGNNDYLPAPAPRANRPYGMDLPGRP 288 VGNN Y PAP RP PG P Sbjct: 178 VGNNPYSSQPAPERERPAARPGPGGP 203
>AROE_NEIMU (P95389) Shikimate dehydrogenase (EC 1.1.1.25)| Length = 269 Score = 28.5 bits (62), Expect = 9.9 Identities = 15/31 (48%), Positives = 19/31 (61%) Frame = +1 Query: 280 GRPTGRFTNGYNLADVISQRLGFEMSPKPYL 372 G+ G T+G L D IS+RLG E+S K L Sbjct: 97 GKIRGDNTDGIGLTDDISKRLGVELSGKTVL 127 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,774,445 Number of Sequences: 219361 Number of extensions: 1008170 Number of successful extensions: 3400 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 3254 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3393 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
