| Clone Name | baet101g08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | STC_DROME (P40798) Protein shuttle craft | 29 | 3.0 | 2 | CAC1G_RAT (O54898) Voltage-dependent T-type calcium channel alph... | 28 | 8.6 | 3 | RIR1_HHV11 (P08543) Ribonucleoside-diphosphate reductase large c... | 28 | 8.6 |
|---|
>STC_DROME (P40798) Protein shuttle craft| Length = 1106 Score = 29.3 bits (64), Expect = 3.0 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +3 Query: 126 HPGSTPPSPRASGACCRCRH 185 H G PP P+ +G CRC H Sbjct: 658 HLGQCPPCPKQTGVKCRCGH 677
>CAC1G_RAT (O54898) Voltage-dependent T-type calcium channel alpha-1G subunit| (Voltage-gated calcium channel alpha subunit Cav3.1) Length = 2254 Score = 27.7 bits (60), Expect = 8.6 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = -3 Query: 196 RERGCRQRQQAPEARGEGGVEPGC 125 RE G R + P RGEGG P C Sbjct: 275 RENGMRSCRSVPTLRGEGGGGPPC 298
>RIR1_HHV11 (P08543) Ribonucleoside-diphosphate reductase large chain (EC| 1.17.4.1) (Ribonucleotide reductase) (136 kDa subunit) Length = 1137 Score = 27.7 bits (60), Expect = 8.6 Identities = 12/24 (50%), Positives = 13/24 (54%), Gaps = 2/24 (8%) Frame = +3 Query: 132 GSTPPSPRAS--GACCRCRHPRSR 197 G PP PR + G CC CR R R Sbjct: 148 GGPPPPPRFTLGGGCCSCRDTRRR 171 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.129 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,625,298 Number of Sequences: 219361 Number of extensions: 206798 Number of successful extensions: 411 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 409 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 411 length of database: 80,573,946 effective HSP length: 42 effective length of database: 71,360,784 effective search space used: 1712658816 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)