ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet101g08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 52 7e-04
2emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4,... 52 7e-04
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 52 7e-04
4dbj|AK109377.3| Oryza sativa (japonica cultivar-group) cDNA clon... 52 7e-04
5dbj|AK119671.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 7e-04
6dbj|AK071276.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 7e-04
7emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 52 7e-04
8ref|XM_474319.1| Oryza sativa (japonica cultivar-group), predic... 46 0.041
9ref|XM_474288.1| Oryza sativa (japonica cultivar-group), predic... 46 0.041
10emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4,... 46 0.041
11emb|AL732346.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 46 0.041
12gb|AY593959.1| Oryza sativa (japonica cultivar-group) methylthio... 44 0.16
13ref|XM_482549.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.16
14ref|XM_474287.1| Oryza sativa (japonica cultivar-group), predic... 44 0.16
15gb|AY022951.1| Oryza sativa microsatellite MRG5276 containing (C... 44 0.16
16gb|AY022467.1| Oryza sativa microsatellite MRG4792 containing (A... 44 0.16
17ref|XM_746857.1| Aspergillus fumigatus Af293 MFS multidrug trans... 44 0.16
18emb|AJ786317.1| Streptomyces fradiae putative neomycin biosynthe... 44 0.16
19dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.16
20dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.16
21emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 44 0.16
22dbj|AK067649.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.16
23dbj|AK067255.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.16
24gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 0.64
25emb|AL662975.3|OSJN00180 Oryza sativa genomic DNA, chromosome 4,... 42 0.64
26gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glyco... 42 0.64
27dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 0.64
28dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 0.64
29gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipie... 42 0.64
30gb|AY489191.1| Triticum aestivum N-myristoyl transferase mRNA, c... 40 2.5
31gb|AC159627.2| Mus musculus BAC clone RP24-202P24 from chromosom... 40 2.5
32gb|DP000017.1| Sus scrofa target 1 genomic scaffold 40 2.5
33gb|AC092478.2| Sus scrofa clone RP44-360A14, complete sequence 40 2.5
34gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 2.5
35gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 2.5
36ref|XM_381292.1| Gibberella zeae PH-1 chromosome 1 hypothetical ... 40 2.5
37emb|AL391001.12| Human DNA sequence from clone RP11-477H21 on ch... 40 2.5
38emb|X96502.1|CRHSP70B C.reinhardtii hsp70b gene 40 2.5
39emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 2.5
40gb|AC163034.4| Mus musculus BAC clone RP23-394C13 from chromosom... 40 2.5
41gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytans... 40 2.5
42dbj|AK093508.1| Homo sapiens cDNA FLJ36189 fis, clone TESTI2027238 40 2.5
43dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 2.5
44gb|CP000264.1| Jannaschia sp. CCS1, complete genome 40 2.5
45dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
46dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
47dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
48dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.5
49dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 2.5
50gb|AE005041.1| Halobacterium sp. NRC-1 section 72 of 170 of the ... 40 2.5
51emb|AL731776.7| Mouse DNA sequence from clone RP23-58B9 on chrom... 40 2.5
52dbj|AK122171.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.5
53dbj|AK070066.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.5
54gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.5
55gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.5
56emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa... 40 2.5
57emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa... 40 2.5
58gb|AC148879.2| Chlamydomonas reinhardtii clone cr-36D8, complete... 40 2.5
59dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 2.5
60emb|AL954178.8| Mouse DNA sequence from clone RP23-21J10 on chro... 40 2.5
61emb|AL732571.8| Mouse DNA sequence from clone RP23-23D11 on chro... 40 2.5
62dbj|AB019147.1| Mus musculus gene for zinc finger transcription ... 40 2.5 
>emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17,
              complete sequence
          Length = 159894

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                    
Query: 32     cagatgtttctcaccgacaagtaccacgccctgctccc 69
              |||||||| |||||||||||||||||||| || |||||
Sbjct: 159607 cagatgttcctcaccgacaagtaccacgcgcttctccc 159570
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>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05,
             complete sequence
          Length = 164943

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 32    cagatgtttctcaccgacaagtaccacgccctgctccc 69
             |||||||| |||||||||||||||||||| || |||||
Sbjct: 54018 cagatgttcctcaccgacaagtaccacgcgcttctccc 53981
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 32       cagatgtttctcaccgacaagtaccacgccctgctccc 69
                |||||||| |||||||||||||||||||| || |||||
Sbjct: 34436533 cagatgttcctcaccgacaagtaccacgcgcttctccc 34436496



 Score = 46.1 bits (23), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 141      ccgccctcgccgcgcgcctcgggggcc 167
                |||||||||||||||||||||| ||||
Sbjct: 34198084 ccgccctcgccgcgcgcctcggcggcc 34198058



 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 141      ccgccctcgccgcgcgcctcgg 162
                ||||||||||||||||||||||
Sbjct: 34192262 ccgccctcgccgcgcgcctcgg 34192241



 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 136      cgacgccgccctcgccgcgcg 156
                |||||||||||||||||||||
Sbjct: 12107153 cgacgccgccctcgccgcgcg 12107133
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>dbj|AK109377.3| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-G02,
          full insert sequence
          Length = 1145

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                
Query: 32 cagatgtttctcaccgacaagtaccacgccctgctccc 69
          |||||||| |||||||||||||||||||| || |||||
Sbjct: 51 cagatgttcctcaccgacaagtaccacgcgcttctccc 88
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>dbj|AK119671.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-H08,
          full insert sequence
          Length = 1366

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                
Query: 32 cagatgtttctcaccgacaagtaccacgccctgctccc 69
          |||||||| |||||||||||||||||||| || |||||
Sbjct: 51 cagatgttcctcaccgacaagtaccacgcgcttctccc 88
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>dbj|AK071276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088F18,
          full insert sequence
          Length = 1365

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                
Query: 32 cagatgtttctcaccgacaagtaccacgccctgctccc 69
          |||||||| |||||||||||||||||||| || |||||
Sbjct: 52 cagatgttcctcaccgacaagtaccacgcgcttctccc 89
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>emb|AL732344.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0403D02, complete
             sequence
          Length = 138387

 Score = 52.0 bits (26), Expect = 7e-04
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 32    cagatgtttctcaccgacaagtaccacgccctgctccc 69
             |||||||| |||||||||||||||||||| || |||||
Sbjct: 57789 cagatgttcctcaccgacaagtaccacgcgcttctccc 57752
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>ref|XM_474319.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 966

 Score = 46.1 bits (23), Expect = 0.041
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                             
Query: 35 atgtttctcaccgacaagtaccacgccctgctccc 69
          ||||| |||||||||||||||||||| || |||||
Sbjct: 1  atgttcctcaccgacaagtaccacgcgcttctccc 35
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>ref|XM_474288.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1284

 Score = 46.1 bits (23), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 141 ccgccctcgccgcgcgcctcgggggcc 167
           |||||||||||||||||||||| ||||
Sbjct: 86  ccgccctcgccgcgcgcctcggcggcc 112
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>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12,
              complete sequence
          Length = 190432

 Score = 46.1 bits (23), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 141    ccgccctcgccgcgcgcctcgggggcc 167
              |||||||||||||||||||||| ||||
Sbjct: 109466 ccgccctcgccgcgcgcctcggcggcc 109440



 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 141    ccgccctcgccgcgcgcctcgg 162
              ||||||||||||||||||||||
Sbjct: 103644 ccgccctcgccgcgcgcctcgg 103623
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>emb|AL732346.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818H01, complete
             sequence
          Length = 101125

 Score = 46.1 bits (23), Expect = 0.041
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 141   ccgccctcgccgcgcgcctcgggggcc 167
             |||||||||||||||||||||| ||||
Sbjct: 48764 ccgccctcgccgcgcgcctcggcggcc 48738



 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 141   ccgccctcgccgcgcgcctcgg 162
             ||||||||||||||||||||||
Sbjct: 42942 ccgccctcgccgcgcgcctcgg 42921
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>gb|AY593959.1| Oryza sativa (japonica cultivar-group) methylthioribose kinase
           (MTK1) mRNA, complete cds
          Length = 1478

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 141 ccgccctcgccgcgcgcctcgg 162
           ||||||||||||||||||||||
Sbjct: 95  ccgccctcgccgcgcgcctcgg 116
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>ref|XM_482549.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1127

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 142 cgccctcgccgcgcgcctcggg 163
           ||||||||||||||||||||||
Sbjct: 381 cgccctcgccgcgcgcctcggg 402
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>ref|XM_474287.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1293

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 141 ccgccctcgccgcgcgcctcgg 162
           ||||||||||||||||||||||
Sbjct: 95  ccgccctcgccgcgcgcctcgg 116
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>gb|AY022951.1| Oryza sativa microsatellite MRG5276 containing (CTG)X8, closest to
           marker R1427, genomic sequence
          Length = 224

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 141 ccgccctcgccgcgcgcctcgg 162
           ||||||||||||||||||||||
Sbjct: 48  ccgccctcgccgcgcgcctcgg 27
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>gb|AY022467.1| Oryza sativa microsatellite MRG4792 containing (AGC)X8, closest to
           marker R1427, genomic sequence
          Length = 224

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 141 ccgccctcgccgcgcgcctcgg 162
           ||||||||||||||||||||||
Sbjct: 179 ccgccctcgccgcgcgcctcgg 200
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>ref|XM_746857.1| Aspergillus fumigatus Af293 MFS multidrug transporter (Afu4g08740)
           partial mRNA
          Length = 2001

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 65  ctccccatccactccgcctccgccacccgg 94
           ||||||||||||||||| ||||||| ||||
Sbjct: 674 ctccccatccactccgcgtccgccaaccgg 645
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>emb|AJ786317.1| Streptomyces fradiae putative neomycin biosynthetic gene cluster,
             strain ATCC 10745
          Length = 42149

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 134   ttcgacgccgccctcgccgcgc 155
             ||||||||||||||||||||||
Sbjct: 38279 ttcgacgccgccctcgccgcgc 38300
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 142      cgccctcgccgcgcgcctcggg 163
                ||||||||||||||||||||||
Sbjct: 21028442 cgccctcgccgcgcgcctcggg 21028421
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>dbj|AP004666.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0431A03
          Length = 149500

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 142   cgccctcgccgcgcgcctcggg 163
             ||||||||||||||||||||||
Sbjct: 94617 cgccctcgccgcgcgcctcggg 94596
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 142    cgccctcgccgcgcgcctcgggggcc 167
              ||||||||||||||||||||| ||||
Sbjct: 675339 cgccctcgccgcgcgcctcggtggcc 675314
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>dbj|AK067649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114G08, full
           insert sequence
          Length = 1698

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 141 ccgccctcgccgcgcgcctcgg 162
           ||||||||||||||||||||||
Sbjct: 197 ccgccctcgccgcgcgcctcgg 218
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>dbj|AK067255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098I15, full
           insert sequence
          Length = 1127

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 142 cgccctcgccgcgcgcctcggg 163
           ||||||||||||||||||||||
Sbjct: 381 cgccctcgccgcgcgcctcggg 402
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 79      cgcctccgccacccgggcgtcccgc 103
               ||||||||||||||||||| |||||
Sbjct: 1919408 cgcctccgccacccgggcggcccgc 1919432
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>emb|AL662975.3|OSJN00180 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071G03,
             complete sequence
          Length = 135169

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 136   cgacgccgccctcgccgcgcg 156
             |||||||||||||||||||||
Sbjct: 35703 cgacgccgccctcgccgcgcg 35683
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>gb|AY899214.1| Streptomyces aizunensis strain NRRL B-11277 glycosyltransferase,
             polyketide synthase type Is, acyl transferase, membrane
             protein, ABC transporter, sugar dehydratase/epimerase,
             sugar epimerase, sugar nucleotidyltransferase, sugar
             dehydratase/epimerase, thioesterase, acyl CoA ligase,
             amine oxidase, phosphopantetheinyl transferase,
             transcriptional regulator,
             carboxylase/carboxyltransferase, amidinohydrolase, amide
             synthetase, 5-aminolevulinate synthase, and acyl CoA
             ligase genes, complete cds; and unknown gene
          Length = 161719

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 133   gttcgacgccgccctcgccgc 153
             |||||||||||||||||||||
Sbjct: 30773 gttcgacgccgccctcgccgc 30793
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 148     cgccgcgcgcctcgggggcct 168
               |||||||||||||||||||||
Sbjct: 7554398 cgccgcgcgcctcgggggcct 7554378
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 139     cgccgccctcgccgcgcgcctcggg 163
               ||||||||||||||||| |||||||
Sbjct: 5655963 cgccgccctcgccgcgcacctcggg 5655987



 Score = 42.1 bits (21), Expect = 0.64
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 135     tcgacgccgccctcgccgcgc 155
               |||||||||||||||||||||
Sbjct: 3308072 tcgacgccgccctcgccgcgc 3308052



 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 163     gggcctgctgccgctgccgg 182
               ||||||||||||||||||||
Sbjct: 3319831 gggcctgctgccgctgccgg 3319812
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>gb|AC167667.4| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940123D9, complete sequence
          Length = 121336

 Score = 42.1 bits (21), Expect = 0.64
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 138   acgccgccctcgccgcgcgcctcgg 162
             ||||||| |||||||||||||||||
Sbjct: 36598 acgccgctctcgccgcgcgcctcgg 36574
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>gb|AY489191.1| Triticum aestivum N-myristoyl transferase mRNA, complete cds
          Length = 1724

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 cgacgccgccctcgccgcgc 155
           ||||||||||||||||||||
Sbjct: 172 cgacgccgccctcgccgcgc 191
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>gb|AC159627.2| Mus musculus BAC clone RP24-202P24 from chromosome 12, complete
             sequence
          Length = 168305

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    ccacgccctgctccccatcc 74
             ||||||||||||||||||||
Sbjct: 82844 ccacgccctgctccccatcc 82863
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>gb|DP000017.1| Sus scrofa target 1 genomic scaffold
          Length = 1471440

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 65      ctccccatccactccgcctc 84
               ||||||||||||||||||||
Sbjct: 1250168 ctccccatccactccgcctc 1250149
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>gb|AC092478.2| Sus scrofa clone RP44-360A14, complete sequence
          Length = 161008

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     ctccccatccactccgcctc 84
              ||||||||||||||||||||
Sbjct: 111732 ctccccatccactccgcctc 111713
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 150    ccgcgcgcctcgggggcctg 169
              ||||||||||||||||||||
Sbjct: 123792 ccgcgcgcctcgggggcctg 123773
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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 163    gggcctgctgccgctgccgg 182
              ||||||||||||||||||||
Sbjct: 223914 gggcctgctgccgctgccgg 223895
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>ref|XM_381292.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01116.1)
           partial mRNA
          Length = 1092

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 168 tgctgccgctgccggcatccccgc 191
           |||||||||||||||||| |||||
Sbjct: 426 tgctgccgctgccggcattcccgc 449
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>emb|AL391001.12| Human DNA sequence from clone RP11-477H21 on chromosome 1 Contains part
              of the PBX1 gene for pre-B-cell leukemia transcription
              factor 1, complete sequence
          Length = 196730

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      ccccagcccacacaccacca 20
              ||||||||||||||||||||
Sbjct: 141552 ccccagcccacacaccacca 141533
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>emb|X96502.1|CRHSP70B C.reinhardtii hsp70b gene
          Length = 5598

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 103  caaggcggcgctgccggccg 122
            ||||||||||||||||||||
Sbjct: 4416 caaggcggcgctgccggccg 4435
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 164     ggcctgctgccgctgccggc 183
               ||||||||||||||||||||
Sbjct: 1686328 ggcctgctgccgctgccggc 1686309
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>gb|AC163034.4| Mus musculus BAC clone RP23-394C13 from chromosome 12, complete
             sequence
          Length = 187877

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 139   cgccgccctcgccgcgcgcc 158
             ||||||||||||||||||||
Sbjct: 87548 cgccgccctcgccgcgcgcc 87567
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>gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytansinoid antitumor agent
             ansamitocin biosynthetic gene cluster I, partial sequence
          Length = 82746

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   gttcgacgccgccctcgccg 152
             ||||||||||||||||||||
Sbjct: 62611 gttcgacgccgccctcgccg 62592



 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   gttcgacgccgccctcgccg 152
             ||||||||||||||||||||
Sbjct: 57670 gttcgacgccgccctcgccg 57651
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>dbj|AK093508.1| Homo sapiens cDNA FLJ36189 fis, clone TESTI2027238
          Length = 1864

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  ccccagcccacacaccacca 20
          ||||||||||||||||||||
Sbjct: 13 ccccagcccacacaccacca 32
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 92     cgggcgtcccgcaaggcggcgctg 115
              |||||| |||||||||||||||||
Sbjct: 840117 cgggcggcccgcaaggcggcgctg 840140
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>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     ccatccactccgcctccgcc 88
              ||||||||||||||||||||
Sbjct: 280275 ccatccactccgcctccgcc 280294
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12,
              complete sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    cgacgccgccctcgccgcgc 155
              ||||||||||||||||||||
Sbjct: 464039 cgacgccgccctcgccgcgc 464058
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    cgacgccgccctcgccgcgc 155
              ||||||||||||||||||||
Sbjct: 416922 cgacgccgccctcgccgcgc 416941
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 139      cgccgccctcgccgcgcgcctcgg 162
                ||||||||||||||| ||||||||
Sbjct: 22264739 cgccgccctcgccgcccgcctcgg 22264762
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>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1267B06
          Length = 156989

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 139   cgccgccctcgccgcgcgcctcgg 162
             ||||||||||||||| ||||||||
Sbjct: 23383 cgccgccctcgccgcccgcctcgg 23406
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 137     gacgccgccctcgccgcgcg 156
               ||||||||||||||||||||
Sbjct: 6998626 gacgccgccctcgccgcgcg 6998645
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>gb|AE005041.1| Halobacterium sp. NRC-1 section 72 of 170 of the complete genome
          Length = 13759

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 8     ccacacaccaccagcgagcc 27
             ||||||||||||||||||||
Sbjct: 12201 ccacacaccaccagcgagcc 12182
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>emb|AL731776.7| Mouse DNA sequence from clone RP23-58B9 on chromosome X, complete
              sequence
          Length = 237321

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     gccctgctccccatccactc 78
              ||||||||||||||||||||
Sbjct: 158940 gccctgctccccatccactc 158921
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>dbj|AK122171.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033148F16, full
           insert sequence
          Length = 2464

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 cgacgccgccctcgccgcgc 155
           ||||||||||||||||||||
Sbjct: 359 cgacgccgccctcgccgcgc 378
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>dbj|AK070066.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040N16, full
           insert sequence
          Length = 938

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 139 cgccgccctcgccgcgcgcctcgg 162
           ||||||||||||||| ||||||||
Sbjct: 343 cgccgccctcgccgcccgcctcgg 366
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    cgacgccgccctcgccgcgc 155
              ||||||||||||||||||||
Sbjct: 416922 cgacgccgccctcgccgcgc 416941
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    cgacgccgccctcgccgcgc 155
              ||||||||||||||||||||
Sbjct: 464039 cgacgccgccctcgccgcgc 464058
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>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from
              chromosome 11 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 164143

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 136    cgacgccgccctcgccgcgc 155
              ||||||||||||||||||||
Sbjct: 124240 cgacgccgccctcgccgcgc 124259
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>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 141089

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   cgacgccgccctcgccgcgc 155
             ||||||||||||||||||||
Sbjct: 82733 cgacgccgccctcgccgcgc 82714
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>gb|AC148879.2| Chlamydomonas reinhardtii clone cr-36D8, complete sequence
          Length = 53591

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  ggggcctgctgccgctgccg 181
            ||||||||||||||||||||
Sbjct: 1700 ggggcctgctgccgctgccg 1681
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     ccgcctccgccacccgggcg 97
              ||||||||||||||||||||
Sbjct: 410205 ccgcctccgccacccgggcg 410186
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>emb|AL954178.8| Mouse DNA sequence from clone RP23-21J10 on chromosome X, complete
             sequence
          Length = 103135

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    gccctgctccccatccactc 78
             ||||||||||||||||||||
Sbjct: 72637 gccctgctccccatccactc 72656
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>emb|AL732571.8| Mouse DNA sequence from clone RP23-23D11 on chromosome 4, complete
              sequence
          Length = 214061

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 55     ccacgccctgctccccatccactc 78
              |||| |||||||||||||||||||
Sbjct: 195939 ccaccccctgctccccatccactc 195962
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>dbj|AB019147.1| Mus musculus gene for zinc finger transcription factor Sp4, partial
            cds
          Length = 4515

 Score = 40.1 bits (20), Expect = 2.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 139  cgccgccctcgccgcgcgcc 158
            ||||||||||||||||||||
Sbjct: 3696 cgccgccctcgccgcgcgcc 3715


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,523,124
Number of Sequences: 3902068
Number of extensions: 1523124
Number of successful extensions: 159953
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 156055
Number of HSP's gapped (non-prelim): 3898
length of query: 201
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 179
effective length of database: 17,147,199,772
effective search space: 3069348759188
effective search space used: 3069348759188
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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