ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet101g06 |
|---|---|
| Clone Library Name | barley_pub |
>PRIO_TRIVU (P51780) Major prion protein precursor (PrP) (PrP27-30) (PrP33-35C)| (CD230 antigen) Length = 259 Score = 34.7 bits (78), Expect = 0.062 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 3/35 (8%) Frame = +1 Query: 76 PIPDPSSAWGTSRPARWPGSPGRP---RAPGWCSP 171 P P P W + R+PG PG P R PGW P Sbjct: 27 PKPRPGGGWNSGGSNRYPGQPGSPGGNRYPGWGHP 61
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 33.5 bits (75), Expect = 0.14 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Frame = -3 Query: 197 GPDQPDPAVGEHHP----GALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNEN 30 GP P A+G P G GRPG PG+R P + +GI G+K N Sbjct: 213 GPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRN 272 Query: 29 G 27 G Sbjct: 273 G 273 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/54 (27%), Positives = 22/54 (40%) Frame = -3 Query: 185 PDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 P PA PG G G+PG+ + P G I G+ + ++GS Sbjct: 416 PGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGS 469 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = -3 Query: 158 PGALGRPGDPGQRAGREVPHAEEGSG 81 PG G+PG+PG + P A G G Sbjct: 650 PGENGKPGEPGPKGDAGAPGAPGGKG 675 Score = 27.7 bits (60), Expect = 7.5 Identities = 17/57 (29%), Positives = 20/57 (35%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENG 27 G + PA PG +G G PG P G+G G K R E G Sbjct: 394 GKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERG 450 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 6/50 (12%) Frame = -3 Query: 158 PGALGRPGDPGQR--AGREVPHAEEG----SGIGRIKGIKERESARNENG 27 PG+ G+PG PG + +GR P G G+ G K + A +NG Sbjct: 545 PGSDGKPGPPGSQGESGRPGPPGPSGPRGQPGVMGFPGPKGNDGAPGKNG 594
>CO1A2_CANFA (O46392) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 33.5 bits (75), Expect = 0.14 Identities = 22/58 (37%), Positives = 25/58 (43%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 GP PD GE PG LG PG G +P +GI KG K R E G+ Sbjct: 613 GPPGPDGNKGE--PGVLGAPGTAGASGPGGLPGERGAAGIPGGKGEKGETGLRGEIGN 668 Score = 27.7 bits (60), Expect = 7.5 Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Frame = -3 Query: 197 GPDQPDPAVGEH-HPGALGRPGD---PGQRAGREVPHAEEGSGIGRIKGIKERESARNEN 30 GP P GE HPG GRPG+ G + R P G I+G + + + Sbjct: 133 GPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQP 192 Query: 29 GS 24 G+ Sbjct: 193 GA 194
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 33.5 bits (75), Expect = 0.14 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Frame = -3 Query: 197 GPDQPDPAVGEHHP----GALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNEN 30 GP P A+G P G GRPG PG+R P + +GI G+K N Sbjct: 212 GPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRN 271 Query: 29 G 27 G Sbjct: 272 G 272 Score = 28.5 bits (62), Expect = 4.4 Identities = 19/57 (33%), Positives = 20/57 (35%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENG 27 G + PA PG LG G PG P SG G K AR E G Sbjct: 393 GKGEMGPAGIPGAPGLLGARGPPGPAGANGAPGQRGPSGEPGKNGAKGEPGARGERG 449 Score = 27.7 bits (60), Expect = 7.5 Identities = 14/26 (53%), Positives = 17/26 (65%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQR 120 G D D + GE PGA G PG+PG+R Sbjct: 461 GEDGKDGSPGE--PGANGVPGNPGER 484 Score = 27.7 bits (60), Expect = 7.5 Identities = 16/54 (29%), Positives = 22/54 (40%) Frame = -3 Query: 185 PDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 P PA PG G G+PG+ + P A G GI + ++GS Sbjct: 415 PGPAGANGAPGQRGPSGEPGKNGAKGEPGARGERGEAGSPGIPGPKGEDGKDGS 468
>CO1A2_BOVIN (P02465) Collagen alpha-2(I) chain precursor| Length = 1364 Score = 32.7 bits (73), Expect = 0.23 Identities = 21/58 (36%), Positives = 25/58 (43%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 GP PD GE PG +G PG G +P +GI KG K R + GS Sbjct: 611 GPPGPDGNKGE--PGVVGAPGTAGPSGPSGLPGERGAAGIPGGKGEKGETGLRGDIGS 666 Score = 27.7 bits (60), Expect = 7.5 Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Frame = -3 Query: 197 GPDQPDPAVGEH-HPGALGRPGD---PGQRAGREVPHAEEGSGIGRIKGIKERESARNEN 30 GP P GE HPG GRPG+ G + R P G I+G + + + Sbjct: 131 GPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQP 190 Query: 29 GS 24 G+ Sbjct: 191 GA 192
>CO6A1_CHICK (P20785) Collagen alpha-1(VI) chain precursor| Length = 1019 Score = 32.3 bits (72), Expect = 0.31 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = -3 Query: 185 PDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 P P H G G+PG PGQ+ P G +G+K + +R E GS Sbjct: 257 PGPPGDPGHEGERGKPGLPGQKGDAGDPGRPGDMGPVGYQGMKGDKGSRGEKGS 310
>COKA1_MOUSE (Q923P0) Collagen alpha-1(XX) chain (Fragment)| Length = 765 Score = 32.3 bits (72), Expect = 0.31 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGS 84 P + P + HPG G PG PGQ G E P ++GS Sbjct: 526 PGRNGPPGQQGHPGPKGEPGPPGQ-TGPEGPGGQQGS 561
>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)| Length = 1262 Score = 32.0 bits (71), Expect = 0.40 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 3/60 (5%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRA--GREVPHAEEG-SGIGRIKGIKERESARNENG 27 G P P +PGA G PG+PG+ G P E G +G +G E R NG Sbjct: 411 GRGLPGPPGTSGNPGAKGTPGEPGKNGAKGDPGPKGERGENGTPGARGPPGEEGKRGANG 470 Score = 28.9 bits (63), Expect = 3.4 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Frame = -3 Query: 197 GPDQPDPAVGEHHP-GALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENG 27 GP P +G P G G PG PG+ R +P G + G+ + AR +G Sbjct: 212 GPPGPAGMIGPAGPPGKDGEPGRPGRNGDRGIPGLPGHKGHPGMPGMPGMKGARGFDG 269 Score = 28.1 bits (61), Expect = 5.8 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 6/50 (12%) Frame = -3 Query: 158 PGALGRPGDPGQRA--GREVPHAEEG----SGIGRIKGIKERESARNENG 27 PG+ G+PG PG + GR P G G+ G K E A +NG Sbjct: 544 PGSDGKPGPPGNQGEPGRSGPPGPAGPRGQPGVMGFPGPKGNEGAPGKNG 593 Score = 27.3 bits (59), Expect = 9.9 Identities = 22/76 (28%), Positives = 28/76 (36%) Frame = -3 Query: 290 ERLDPAPRLQRARVGQEMPXXXXXXXXXXXRGPDQPDPAVGEHHPGALGRPGDPGQRAGR 111 ER +P P+ Q G + P P + G+ G G PG PG GR Sbjct: 366 ERGEPGPQGQAGPPGPQGP-------------PGRAGSPGGKGEMGPSGIPGGPGPPGGR 412 Query: 110 EVPHAEEGSGIGRIKG 63 +P SG KG Sbjct: 413 GLPGPPGTSGNPGAKG 428
>STNB_CAEEL (P90761) Putative stoned B-like protein (Unc-41)| Length = 1657 Score = 32.0 bits (71), Expect = 0.40 Identities = 16/27 (59%), Positives = 18/27 (66%) Frame = +1 Query: 76 PIPDPSSAWGTSRPARWPGSPGRPRAP 156 P P+ SS+ GTS PAR P P RP AP Sbjct: 673 PTPEASSSTGTSAPARPP--PARPEAP 697
>MARCO_MOUSE (Q60754) Macrophage receptor MARCO (Macrophage receptor with| collagenous structure) Length = 518 Score = 31.6 bits (70), Expect = 0.52 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 6/63 (9%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESA------RNE 33 P P PA + GA GR G PG + + P ++ +G+ + G ++ A R E Sbjct: 167 PGLPGPAAEKGEKGAAGRDGTPGVQGPQGPPGSKGEAGLQGLTGAPGKQGATGAPGPRGE 226 Query: 32 NGS 24 GS Sbjct: 227 KGS 229
>COAA1_BOVIN (P23206) Collagen alpha-1(X) chain precursor| Length = 674 Score = 31.6 bits (70), Expect = 0.52 Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 7/63 (11%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQ-------RAGREVPHAEEGSGIGRIKGIKERESARN 36 P P PA HPG G PG PG + G P +G + G+ ++ R Sbjct: 62 PGPPGPAGPRGHPGPSGPPGKPGTGSPGPQGQPGLPGPPGPSATGKPGLPGLPGKQGERG 121 Query: 35 ENG 27 NG Sbjct: 122 LNG 124 Score = 28.1 bits (61), Expect = 5.8 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPG 126 GP P GE P +G+PG PG Sbjct: 247 GPSGPQGPPGEQGPEGIGKPGAPG 270
>CO4A3_HUMAN (Q01955) Collagen alpha-3(IV) chain precursor (Goodpasture antigen)| Length = 1670 Score = 31.6 bits (70), Expect = 0.52 Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 1/58 (1%) Frame = -3 Query: 197 GPDQPDPAVGEH-HPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENG 27 GP D +G PGA+G PG PG P GI +KG + A+ E G Sbjct: 883 GPPGEDGVIGMMGFPGAIGPPGPPGNPG---TPGQRGSPGIPGVKGQRGTPGAKGEQG 937 Score = 29.3 bits (64), Expect = 2.6 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Frame = -3 Query: 197 GPDQPDPAVGEH-HPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIK 57 GP + +G+ PG G G+PG++ R VP G+ +KG+K Sbjct: 943 GPSEISHVIGDKGEPGLKGFAGNPGEKGNRGVP------GMPGLKGLK 984 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/30 (43%), Positives = 14/30 (46%) Frame = +1 Query: 82 PDPSSAWGTSRPARWPGSPGRPRAPGWCSP 171 P P G + P PGSPG P PG P Sbjct: 1088 PGPPGHLGPAGPEGAPGSPGSPGLPGKPGP 1117
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 31.2 bits (69), Expect = 0.68 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 4/61 (6%) Frame = -3 Query: 197 GPDQPDPAVGEHHP----GALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNEN 30 GP P A+G P G GRPG PG+R P + +G+ G+K N Sbjct: 212 GPPGPPGALGPAGPAGKDGESGRPGRPGERGLPGPPGIKGPAGMPGFPGMKGHRGFDGRN 271 Query: 29 G 27 G Sbjct: 272 G 272 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/57 (31%), Positives = 21/57 (36%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENG 27 G + PA PG +G G PG +P SG G K AR E G Sbjct: 393 GKGEMGPAGIPGAPGLIGARGPPGPAGTNGIPGTRGPSGEPGKNGAKGEPGARGERG 449
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 31.2 bits (69), Expect = 0.68 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 6/64 (9%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVP--HAEEG----SGIGRIKGIKERESARN 36 GP P +V E PG G G PG + + P + ++G G+ IKG + R Sbjct: 2088 GPPGPKVSVDEPGPGLSGEQGPPGLKGAKGEPGSNGDQGPKGDRGVPGIKGDRGEPGPRG 2147 Query: 35 ENGS 24 ++G+ Sbjct: 2148 QDGN 2151 Score = 29.3 bits (64), Expect = 2.6 Identities = 20/58 (34%), Positives = 23/58 (39%), Gaps = 1/58 (1%) Frame = -3 Query: 197 GPDQPDPAVGEH-HPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENG 27 GP A GE PGA GRPG PG+ P A G + G + R G Sbjct: 1287 GPPGSATAKGERGFPGADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRG 1344 Score = 27.3 bits (59), Expect = 9.9 Identities = 24/87 (27%), Positives = 30/87 (34%), Gaps = 2/87 (2%) Frame = -3 Query: 281 DPAPRLQRARVGQEMPXXXXXXXXXXXRGPDQPDPAVGEHHPGALGRPGDPGQR--AGRE 108 DP PR G M GP + A GE PG G PG PG + G Sbjct: 1384 DPGPRGPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPGE--PGLPGLPGSPGPQGPVGPP 1441 Query: 107 VPHAEEGSGIGRIKGIKERESARNENG 27 E+G G+ + + E G Sbjct: 1442 GKKGEKGDSEDGAPGLPGQPGSPGEQG 1468 Score = 27.3 bits (59), Expect = 9.9 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPG 126 P P +G PG GR GDPG Sbjct: 1349 PGAPGQVIGGEGPGLPGRKGDPG 1371
>MARCO_HUMAN (Q9UEW3) Macrophage receptor MARCO (Macrophage receptor with| collagenous structure) (Scavenger receptor class A member 2) Length = 520 Score = 31.2 bits (69), Expect = 0.68 Identities = 19/57 (33%), Positives = 24/57 (42%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENG 27 G P AVG HPGA G PG G +P + G +KG K + + G Sbjct: 307 GVPGPPGAVG--HPGAKGEPGSAGSPGRAGLPGSPGSPGATGLKGSKGDTGLQGQQG 361 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/45 (37%), Positives = 22/45 (48%) Frame = -3 Query: 161 HPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENG 27 H GA+G PG PG P AE+G+ KG R+ A +G Sbjct: 158 HKGAMGMPGAPGPPG----PPAEKGA-----KGAMGRDGATGPSG 193
>DPY5_CAEEL (P91285) Cuticle collagen dpy-5 (Protein dumpy-5)| Length = 284 Score = 30.8 bits (68), Expect = 0.89 Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 2/39 (5%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRA--GREVPHAEEG 87 GP D G+ PG GRPG PG R G EEG Sbjct: 197 GPPGRDGLTGKGQPGVAGRPGMPGPRGEPGNNGNPGEEG 235
>COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor| Length = 1603 Score = 30.8 bits (68), Expect = 0.89 Identities = 17/44 (38%), Positives = 23/44 (52%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKG 63 P QP P GE P +GRPG PGQ +P + G+ ++G Sbjct: 740 PGQPGPK-GEQGPEGVGRPGKPGQPG---LPGVQGPPGLKGVQG 779 Score = 28.9 bits (63), Expect = 3.4 Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 4/56 (7%) Frame = -3 Query: 281 DPAPRLQRARVGQE----MPXXXXXXXXXXXRGPDQPDPAVGEHHPGALGRPGDPG 126 DP Q+ + G++ MP GP P PA HPGA G G PG Sbjct: 1368 DPGAAGQKGQAGEKGRAGMPGGPGKSGSMGPVGP--PGPAGERGHPGAPGPSGSPG 1421
>OGFR_RAT (Q9QXY4) Opioid growth factor receptor (OGFr) (Zeta-type opioid| receptor) Length = 580 Score = 30.8 bits (68), Expect = 0.89 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEG 87 GP+ P+ VG P + P DP + G E P+++ G Sbjct: 485 GPEDPNSQVGLEDPNSQVGPEDPNSQVGPEDPNSQVG 521 Score = 30.0 bits (66), Expect = 1.5 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAE 93 GP+ P+ VG P + P DP + G E P+++ Sbjct: 503 GPEDPNSQVGPEDPNSQVGPEDPNSQVGPEDPNSQ 537
>COAA1_CHICK (P08125) Collagen alpha-1(X) chain precursor| Length = 674 Score = 30.8 bits (68), Expect = 0.89 Identities = 18/62 (29%), Positives = 26/62 (41%) Frame = -3 Query: 263 QRARVGQEMPXXXXXXXXXXXRGPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGS 84 Q+ +G +P +GP + G PG G PG PG + R +P A + Sbjct: 180 QKGEMGFGVPGRPGNRGLPGPQGPQGLPGSAGIGKPGENGLPGQPGMKGDRGLPGARGEA 239 Query: 83 GI 78 GI Sbjct: 240 GI 241
>COFA1_MOUSE (O35206) Collagen alpha-1(XV) chain precursor [Contains: Endostatin| (Endostatin-XV)] Length = 1367 Score = 30.8 bits (68), Expect = 0.89 Identities = 17/45 (37%), Positives = 23/45 (51%) Frame = -3 Query: 158 PGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 PG G PG+PG + P + SG +G+K + AR NGS Sbjct: 634 PGEDGAPGEPGPQGPEGQPGLDGASG---QQGMKGEKGARGPNGS 675
>HP20_TAMSI (Q06575) Hibernation-associated plasma protein HP-20 precursor| (Hibernator-specific blood complex, 20 kDa subunit) Length = 196 Score = 30.8 bits (68), Expect = 0.89 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQR 120 P P P PGA GRPGDPG + Sbjct: 36 PGVPGPRGPPGQPGAAGRPGDPGPK 60
>YK61_CAEEL (P34340) Putative cuticle collagen C29E4.1| Length = 305 Score = 30.4 bits (67), Expect = 1.2 Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%) Frame = -3 Query: 197 GPDQPDPAVGE-HHPGALGRPGDPGQRAGREVP--HAEEG 87 G D PD G + PGA+G+PG+PG +P H E G Sbjct: 193 GADGPDGMPGTAYFPGAVGQPGEPGWLGQPGLPGKHGEPG 232
>YEHW_ECOLI (P33359) Inner membrane ABC transporter permease protein yehW| Length = 243 Score = 30.4 bits (67), Expect = 1.2 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Frame = +3 Query: 36 IPRTLSFFYPLYPSYPRPLFGMGNFASCTLAR--IPGAAKGARVVLPDG-GIRLVRP 197 +P + F L+P PRP++ +FA+ LA + G + V++ G GI + RP Sbjct: 22 LPYSQPLFAALFPQLPRPVYQQESFAALALAHFWLVGISSLFAVIIGTGAGIAVTRP 78
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 30.4 bits (67), Expect = 1.2 Identities = 14/30 (46%), Positives = 16/30 (53%) Frame = +1 Query: 82 PDPSSAWGTSRPARWPGSPGRPRAPGWCSP 171 P P G + PA PG+PG P APG P Sbjct: 1026 PGPKGDRGETGPAGPPGAPGAPGAPGPVGP 1055
>COL13_CAEEL (P20631) Cuticle collagen 13 precursor| Length = 316 Score = 30.4 bits (67), Expect = 1.2 Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 2/66 (3%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREV--PHAEEGSGIGRIKGIKERESARNENGSW 21 P P PA PG G PG PGQ + P + +G G + A ++G Sbjct: 239 PGTPGPAGPPGSPGPAGAPGQPGQAGSSQPGGPGPQGDAGAPGAPGAPGQAGAPGQDGES 298 Query: 20 *WLGAC 3 GAC Sbjct: 299 GSEGAC 304 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVP 102 GP P A G+ P G PG PGQ G +P Sbjct: 176 GPPGPSGAPGQKGPS--GAPGAPGQSGGAALP 205
>COL12_CAEEL (P20630) Cuticle collagen 12 precursor| Length = 316 Score = 30.4 bits (67), Expect = 1.2 Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 2/66 (3%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREV--PHAEEGSGIGRIKGIKERESARNENGSW 21 P P PA PG G PG PGQ + P + +G G + A ++G Sbjct: 239 PGTPGPAGPPGSPGPAGAPGQPGQAGSSQPGGPGPQGDAGAPGAPGAPGQAGAPGQDGES 298 Query: 20 *WLGAC 3 GAC Sbjct: 299 GSEGAC 304 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/32 (43%), Positives = 16/32 (50%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVP 102 GP P A G+ P G PG PGQ G +P Sbjct: 176 GPPGPSGAPGQKGPS--GAPGAPGQSGGAALP 205
>CO4A4_HUMAN (P53420) Collagen alpha-4(IV) chain precursor| Length = 1690 Score = 28.9 bits (63), Expect = 3.4 Identities = 18/47 (38%), Positives = 20/47 (42%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIK 57 GP P G P LG PG PG+R VP G +KG K Sbjct: 616 GPLGPPGKAGPVGPPGLGFPGPPGERGHPGVPGHPGVRGPDGLKGQK 662 Score = 25.4 bits (54), Expect(2) = 1.5 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +1 Query: 85 DPSSAWGTSRPARWPGSPGRP 147 DP+S +G P PGSPG P Sbjct: 1076 DPASHFGPPGPKGEPGSPGCP 1096 Score = 23.1 bits (48), Expect(2) = 1.5 Identities = 9/14 (64%), Positives = 9/14 (64%) Frame = +1 Query: 130 GSPGRPRAPGWCSP 171 GSPGRP PG P Sbjct: 1115 GSPGRPGPPGSSGP 1128
>CAF1_EPHMU (P18856) Collagen EMF1-alpha precursor (Fibrillar collagen)| (Fragment) Length = 547 Score = 30.0 bits (66), Expect = 1.5 Identities = 17/44 (38%), Positives = 20/44 (45%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKG 63 P P P PG LGRPG+ G + R P A G+ I G Sbjct: 70 PGPPGP------PGDLGRPGERGAKGVRGTPGAPGVDGVAGIAG 107
>CO8A1_RABIT (P14282) Collagen alpha-1(VIII) chain precursor (Endothelial| collagen) Length = 744 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 11/58 (18%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRA-----------GREVPHAEEGSGIGRIKGIK 57 GP P G PG G PG PG + G + P E+G G+ + G+K Sbjct: 197 GPPGPHGLPGIGKPGGPGLPGQPGAKGDRGPKGPPGPPGLQGPKGEKGFGMPGLPGLK 254
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Frame = -3 Query: 197 GPDQPDPAVGEH-HPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENG 27 GP P A+G G GRPG PG R P + +G+ G+K NG Sbjct: 60 GPPGPPGAIGPSGKDGESGRPGRPGPRGFPGPPGMKGPAGMPGFPGMKGHRGFDGRNG 117 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 6/50 (12%) Frame = -3 Query: 158 PGALGRPGDPGQR--AGREVPHAEEG----SGIGRIKGIKERESARNENG 27 PG+ G+PG PG + GR P G G+ G K + A +NG Sbjct: 389 PGSNGKPGPPGSQGETGRPGPPGSPGPRGQPGVMGFPGPKGNDGAPGKNG 438
>COL7_CAEEL (P18832) Cuticle collagen 7 precursor| Length = 316 Score = 30.0 bits (66), Expect = 1.5 Identities = 14/31 (45%), Positives = 15/31 (48%) Frame = +1 Query: 79 IPDPSSAWGTSRPARWPGSPGRPRAPGWCSP 171 +P PS A G P PG PG APG P Sbjct: 205 LPGPSGAPGPQGPPGAPGQPGSGNAPGPAGP 235 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 5/36 (13%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQ-----RAGREVP 102 P P PA PG G PG+PG + GR +P Sbjct: 171 PGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLP 206
>CUC2C_HAECO (P16252) Cuticle collagen 2C (Fragment)| Length = 210 Score = 30.0 bits (66), Expect = 1.5 Identities = 17/39 (43%), Positives = 20/39 (51%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSG 81 GP P+ A G HPGA G PG+ G R P A +G Sbjct: 139 GPPGPNGAPG--HPGAPGAPGEKGPRGQDGHPGAPGNAG 175 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEG 87 P + P + HPGA G G PGQ G+ P E G Sbjct: 156 PGEKGPRGQDGHPGAPGNAGHPGQ-PGQPGPPGERG 190 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/30 (43%), Positives = 14/30 (46%) Frame = +1 Query: 82 PDPSSAWGTSRPARWPGSPGRPRAPGWCSP 171 P P+ G P PG PG P APG P Sbjct: 132 PGPTGPEGPPGPNGAPGHPGAPGAPGEKGP 161
>CO8A1_MOUSE (Q00780) Collagen alpha-1(VIII) chain precursor| Length = 743 Score = 30.0 bits (66), Expect = 1.5 Identities = 18/58 (31%), Positives = 24/58 (41%), Gaps = 11/58 (18%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRA-----------GREVPHAEEGSGIGRIKGIK 57 GP P G PG G PG PG + G + P E+G G+ + G+K Sbjct: 197 GPPGPHGLPGIGKPGGPGLPGQPGAKGERGPKGPPGPPGLQGPKGEKGFGMPGLPGLK 254
>CO6A2_MOUSE (Q02788) Collagen alpha-2(VI) chain precursor| Length = 1029 Score = 30.0 bits (66), Expect = 1.5 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = -3 Query: 197 GPDQPDPAVGEHHP-GALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 GP P G+ G +G PG+PGQ+ + P E G KG+ + + E GS Sbjct: 266 GPHGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEGPIGFPGPKGVPGFKGEKGEFGS 324
>DPY7_CAEEL (P34688) Cuticle collagen dpy-7 precursor (Protein dumpy-7)| Length = 318 Score = 29.6 bits (65), Expect = 2.0 Identities = 18/34 (52%), Positives = 18/34 (52%), Gaps = 1/34 (2%) Frame = -3 Query: 161 HPGALGRPGDPGQRAGREVPHAEEG-SGIGRIKG 63 HPG GRPG PG R G P E G G IKG Sbjct: 169 HPGLPGRPGKPG-RVGDAGPQGEPGEQGEPGIKG 201
>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)| Length = 1027 Score = 29.6 bits (65), Expect = 2.0 Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 6/56 (10%) Frame = -3 Query: 158 PGALGRPGDPGQRA-----GREVPHAEEGS-GIGRIKGIKERESARNENGSW*WLG 9 PGA G PGD G+R G + P GS G I G+K + G W G Sbjct: 888 PGAAGPPGDRGERGEPGGQGVQGPVGAPGSQGPAGIMGMKGEAGGKGAKGDKGWTG 943
>COEA1_MOUSE (Q80X19) Collagen alpha-1(XIV) chain precursor| Length = 1797 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQR 120 GP P GE PG+ G PG PG R Sbjct: 1714 GPPGPAGPSGESRPGSPGPPGSPGPR 1739
>SSBP3_MOUSE (Q9D032) Single-stranded DNA-binding protein 3 (Sequence-specific| single-stranded-DNA-binding protein) (Lck-associated signal transducer) Length = 388 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = +3 Query: 18 SPTPILIPRTLSFFYPLYPSYPRPLFGMGNFASCTLARIPGAAKGARVVLPD 173 +P+ ++ P + F P Y PRP MGN + PG G + +LP+ Sbjct: 139 NPSSMMGPHSQPFMSPRYAGGPRPPIRMGN-------QPPGGVPGTQPLLPN 183
>SSBP3_HUMAN (Q9BWW4) Single-stranded DNA-binding protein 3 (Sequence-specific| single-stranded-DNA-binding protein) Length = 388 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = +3 Query: 18 SPTPILIPRTLSFFYPLYPSYPRPLFGMGNFASCTLARIPGAAKGARVVLPD 173 +P+ ++ P + F P Y PRP MGN + PG G + +LP+ Sbjct: 139 NPSSMMGPHSQPFMSPRYAGGPRPPIRMGN-------QPPGGVPGTQPLLPN 183
>SCAR3_MOUSE (Q8C850) Scavenger receptor class A member 3| Length = 606 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEG 87 P P P+ + PG G+ G PGQR G P E G Sbjct: 552 PGSPGPSGPQGKPGISGKTGSPGQR-GATGPKGEPG 586
>SCAR3_HUMAN (Q6AZY7) Scavenger receptor class A member 3 (Cellular stress| response gene protein) Length = 606 Score = 29.6 bits (65), Expect = 2.0 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEG 87 P P P+ + PG G+ G PGQR G P E G Sbjct: 552 PGSPGPSGPQGKPGIAGKTGSPGQR-GAMGPKGEPG 586
>HORN_HUMAN (Q86YZ3) Hornerin| Length = 2850 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Frame = -3 Query: 179 PAVGEHHPGALGRP--GDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGSW 21 P G+ G+ P G G +GR + GSG+G G ES+ ++ S+ Sbjct: 2536 PGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSY 2590 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Frame = -3 Query: 179 PAVGEHHPGALGRP--GDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGSW 21 P G+ G+ P G G +GR + GSG+G G ES+ ++ S+ Sbjct: 1596 PGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSY 1650 Score = 29.6 bits (65), Expect = 2.0 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Frame = -3 Query: 179 PAVGEHHPGALGRP--GDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGSW 21 P G+ G+ P G G +GR + GSG+G G ES+ ++ S+ Sbjct: 1126 PGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSY 1180 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/55 (27%), Positives = 24/55 (43%), Gaps = 2/55 (3%) Frame = -3 Query: 179 PAVGEHHPGALGRP--GDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGSW 21 P G+ G+ P G G +GR + G G+G G ES+ ++ S+ Sbjct: 2066 PGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSGQSSSY 2120
>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)| Length = 1362 Score = 29.6 bits (65), Expect = 2.0 Identities = 19/58 (32%), Positives = 25/58 (43%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 GP PD GE PG +G G PG +P +G+ KG K R + G+ Sbjct: 611 GPPGPDGNKGE--PGNVGPAGAPGPAGPGGIPGERGVAGVPGGKGEKGAPGLRGDTGA 666 Score = 27.7 bits (60), Expect = 7.5 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 4/49 (8%) Frame = -3 Query: 197 GPDQPDPAVGEH-HPGALGRPGD---PGQRAGREVPHAEEGSGIGRIKG 63 GP P GE HPG GRPG+ G + R P G I+G Sbjct: 132 GPPGPPGKAGEDGHPGKPGRPGERGVAGPQGARGFPGTPGPPGFKGIRG 180
>PRGR_RAT (Q63449) Progesterone receptor (PR)| Length = 923 Score = 29.6 bits (65), Expect = 2.0 Identities = 21/58 (36%), Positives = 26/58 (44%) Frame = +3 Query: 63 PLYPSYPRPLFGMGNFASCTLARIPGAAKGARVVLPDGGIRLVRPPTTAAELMLEAPG 236 PL S PR L GM + T A PGAA G ++P R P + + APG Sbjct: 235 PLLKSKPRALEGMCSGGGVT-ANAPGAAPGGVTLVPKEDSRFSAPRVSLEQDAPVAPG 291
>COEA1_HUMAN (Q05707) Collagen alpha-1(XIV) chain precursor (Undulin)| Length = 1796 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQR 120 GP P GE PG+ G PG PG R Sbjct: 1713 GPPGPAGPSGESRPGSPGPPGSPGPR 1738
>CO4A1_MOUSE (P02463) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 29.6 bits (65), Expect = 2.0 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 8/52 (15%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQ--------RAGREVPHAEEGSGIGRIKG 63 P P P + PG +GRPG PG+ G + E G G+ +KG Sbjct: 692 PGLPGPKGVDGLPGEIGRPGSPGRPGFNGLPGNPGPQGQKGEPGIGLPGLKG 743 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/56 (30%), Positives = 25/56 (44%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENG 27 P PA + PG+ G PG G++ + VP G G G K + ++ E G Sbjct: 1141 PGPTGPAGQKGEPGSDGIPGSAGEKGEQGVP----GRGFPGFPGSKGDKGSKGEVG 1192 Score = 27.3 bits (59), Expect = 9.9 Identities = 20/78 (25%), Positives = 27/78 (34%) Frame = -3 Query: 260 RARVGQEMPXXXXXXXXXXXRGPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSG 81 + G+ +P P P P PG GRPG PG++ P G G Sbjct: 635 KGEAGKVVPLPGPPGAAGLPGSPGFPGPQGDRGFPGTPGRPGIPGEKGAVGQP----GIG 690 Query: 80 IGRIKGIKERESARNENG 27 + G K + E G Sbjct: 691 FPGLPGPKGVDGLPGEIG 708
>CO4A5_HUMAN (P29400) Collagen alpha-5(IV) chain precursor| Length = 1685 Score = 29.3 bits (64), Expect = 2.6 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVP 102 P +P P G HPG G PG+ G+ +P Sbjct: 1145 PGEPGPVGGGGHPGQPGPPGEKGKPGQDGIP 1175 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/32 (43%), Positives = 18/32 (56%) Frame = -3 Query: 185 PDPAVGEHHPGALGRPGDPGQRAGREVPHAEE 90 P P + PGA G PG PG AG +P ++E Sbjct: 419 PGPPGLDGQPGAPGLPGPPGP-AGPHIPPSDE 449
>UL56_HHV2H (P28282) Protein UL56| Length = 235 Score = 29.3 bits (64), Expect = 2.6 Identities = 12/33 (36%), Positives = 16/33 (48%) Frame = +1 Query: 76 PIPDPSSAWGTSRPARWPGSPGRPRAPGWCSPT 174 P+ + + R AR S P+APGWC T Sbjct: 181 PLVNSRELYRAQRAARCASSSDTPQAPGWCGGT 213
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 29.3 bits (64), Expect = 2.6 Identities = 20/58 (34%), Positives = 24/58 (41%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 GP P A G PG PG PG + R P + G G+K + ENGS Sbjct: 198 GPPGPQGARG--FPGT---PGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGS 250 Score = 28.9 bits (63), Expect = 3.4 Identities = 14/31 (45%), Positives = 15/31 (48%) Frame = +1 Query: 82 PDPSSAWGTSRPARWPGSPGRPRAPGWCSPT 174 P P+ G PA PG PG P A G PT Sbjct: 281 PGPAGPPGPVGPAGGPGFPGAPGAKGEAGPT 311 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +1 Query: 82 PDPSSAWGTSRPARWPGSPGRPRAPG 159 P P G + PA PG+PG P PG Sbjct: 1118 PGPRGRSGETGPAGPPGNPGPPGPPG 1143
>COFA1_HUMAN (P39059) Collagen alpha-1(XV) chain precursor [Contains: Endostatin| (Endostatin-XV) (Restin) (Related to endostatin)] Length = 1388 Score = 29.3 bits (64), Expect = 2.6 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPG 126 GP P A G P GRPGDPG Sbjct: 1073 GPQGPPGAPGLPGPPGFGRPGDPG 1096
>COCA1_BOVIN (P25508) Collagen alpha-1(XII) chain (Fragments)| Length = 86 Score = 29.3 bits (64), Expect = 2.6 Identities = 17/37 (45%), Positives = 19/37 (51%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEG 87 GP P + GE PG GRPG PG G + P E G Sbjct: 7 GPPGPPGSAGEPGPG--GRPGFPG-TPGMQGPQGERG 40
>CO6A2_HUMAN (P12110) Collagen alpha-2(VI) chain precursor| Length = 1019 Score = 29.3 bits (64), Expect = 2.6 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%) Frame = -3 Query: 197 GPDQPDPAVGEHHP-GALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 GP P G+ G +G PG+PGQ+ + P E G KG+ + + E G+ Sbjct: 256 GPSGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEGPIGFPGPKGVPGFKGEKGEFGA 314
>CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor| Length = 1022 Score = 29.3 bits (64), Expect = 2.6 Identities = 22/60 (36%), Positives = 24/60 (40%) Frame = -3 Query: 290 ERLDPAPRLQRARVGQEMPXXXXXXXXXXXRGPDQPDPAVGEHHPGALGRPGDPGQRAGR 111 ER DP P R G+ GP P AVGE PG +G GDPG R Sbjct: 443 ERGDPGPEGPRGLPGEV--GNKGARGDQGLPGPRGPTGAVGE--PGNIGSRGDPGDLGPR 498 Score = 28.5 bits (62), Expect = 4.4 Identities = 23/73 (31%), Positives = 25/73 (34%), Gaps = 9/73 (12%) Frame = -3 Query: 278 PAPRLQRARVGQEMPXXXXXXXXXXXRGPDQPDPAVGEHHP-------GALGRPGDPGQR 120 P P+ R R G P +G P GE P G G PGDPG R Sbjct: 504 PGPKGDRGRPGFSYPGPRGPQGDKGEKGQPGPKGGRGELGPKGTQGTKGEKGEPGDPGPR 563 Query: 119 A--GREVPHAEEG 87 G P E G Sbjct: 564 GEPGTRGPPGEAG 576 Score = 28.1 bits (61), Expect = 5.8 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = -3 Query: 158 PGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIK 57 PG G PG PG++ +P G G KG K Sbjct: 378 PGRSGPPGPPGEKGSPGIPGNPGAQGPGGTKGRK 411
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 29.3 bits (64), Expect = 2.6 Identities = 20/58 (34%), Positives = 24/58 (41%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 GP PD GE PG +G G G +P +GI KG K R E G+ Sbjct: 613 GPPGPDGNKGE--PGVVGAVGTAGPSGPSGLPGERGAAGIPGGKGEKGEPGLRGEIGN 668 Score = 27.3 bits (59), Expect = 9.9 Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Frame = -3 Query: 197 GPDQPDPAVGEH-HPGALGRPGD---PGQRAGREVPHAEEGSGIGRIKGIKERESARNEN 30 GP P GE HPG GRPG+ G + R P G I+G + + + Sbjct: 133 GPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQP 192 Query: 29 GS 24 G+ Sbjct: 193 GA 194
>CO5A1_HUMAN (P20908) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 29.3 bits (64), Expect = 2.6 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 9/73 (12%) Frame = -3 Query: 278 PAPRLQRARVGQEMPXXXXXXXXXXXRGPDQPDPAVGEH----HPGALGRPGDPGQ---- 123 P P+ +R G+ P GP P G+ PG +G PGDPG Sbjct: 1302 PGPKGERGEKGESGPSGAA--------GPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEP 1353 Query: 122 -RAGREVPHAEEG 87 AG++ P ++G Sbjct: 1354 GPAGQDGPPGDKG 1366 Score = 29.3 bits (64), Expect = 2.6 Identities = 18/57 (31%), Positives = 26/57 (45%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENG 27 GP P +G +PGA+G G+PG+ +P G G G K + E+G Sbjct: 1267 GPQGPPGGIG--NPGAVGEKGEPGEAGEPGLP------GEGGPPGPKGERGEKGESG 1315 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/57 (26%), Positives = 25/57 (43%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 P P + PG G+ G PG++ G+ P + G +G+K + R G+ Sbjct: 750 PGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGT 806 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEG 87 P +P PA + PG G G+PGQ G P E G Sbjct: 1350 PGEPGPAGQDGPPGDKGDDGEPGQ-TGSPGPTGEPG 1384
>FGD1_HUMAN (P98174) FYVE, RhoGEF and PH domain-containing protein 1| (Faciogenital dysplasia 1 protein) (Zinc finger FYVE domain-containing protein 3) (Rho/Rac guanine nucleotide exchange factor FGD1) (Rho/Rac GEF) Length = 961 Score = 29.3 bits (64), Expect = 2.6 Identities = 18/65 (27%), Positives = 27/65 (41%) Frame = +3 Query: 21 PTPILIPRTLSFFYPLYPSYPRPLFGMGNFASCTLARIPGAAKGARVVLPDGGIRLVRPP 200 P P+++P+ S P P P G + C PG G +V D GI + P Sbjct: 239 PEPVMLPQPTS--QPPVPQLPE-----GEASRCLFLLAPGPRDGEKVPNRDSGIDSISSP 291 Query: 201 TTAAE 215 + + E Sbjct: 292 SNSEE 296
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 28.9 bits (63), Expect = 3.4 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 13/71 (18%) Frame = -3 Query: 197 GPDQPDPAVG-------EHHPGALGRPGDPGQR--AGREVPHAEEGS----GIGRIKGIK 57 G + P AVG + PG G PG+PGQ+ AG P GS G + G+K Sbjct: 834 GENGPTGAVGFAGPQGSDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLK 893 Query: 56 ERESARNENGS 24 + G+ Sbjct: 894 GGRGTQGPPGA 904 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/53 (30%), Positives = 22/53 (41%) Frame = -3 Query: 185 PDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENG 27 P P + HPG G PG+ G+ + VP G +G + R E G Sbjct: 668 PGPTGFQGHPGPPGPPGEGGKPGDQGVPGGPGAVGPLGPRGERGNPGERGEPG 720
>HP27_TAMSI (Q06577) Hibernation-associated plasma protein HP-27 precursor| (Hibernator-specific blood complex, 27 kDa subunit) Length = 215 Score = 28.9 bits (63), Expect = 3.4 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +1 Query: 79 IPDPSSAWGTSRPARWPGSPGRPRAPGW 162 +P P G P PG+PG+P PGW Sbjct: 41 VPGPQGPPGMRGP---PGTPGKPGPPGW 65
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 28.9 bits (63), Expect = 3.4 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%) Frame = -3 Query: 197 GPDQPDPAVGEH----HPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNEN 30 GP P G++ +PG +G PGDPG G P ++G+ KG + + + Sbjct: 1249 GPPGPKGPTGDNGPKGNPGPVGFPGDPGP-PGEAGPRGQDGA-----KGDRGEDGEPGQP 1302 Query: 29 GS 24 GS Sbjct: 1303 GS 1304
>YHL1_EBV (P03181) Hypothetical protein BHLF1| Length = 660 Score = 28.9 bits (63), Expect = 3.4 Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 5/44 (11%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREV-----PHAEEGSG 81 GP PA PGA G P PG G V PH E GSG Sbjct: 555 GPTGGRPAA----PGAPGTPAAPGPGGGAAVPSGATPHPERGSG 594 Score = 28.9 bits (63), Expect = 3.4 Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 5/44 (11%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREV-----PHAEEGSG 81 GP PA PGA G P PG G V PH E GSG Sbjct: 430 GPTGGRPAA----PGAPGTPAAPGPGGGAAVPSGATPHPERGSG 469 Score = 28.9 bits (63), Expect = 3.4 Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 5/44 (11%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREV-----PHAEEGSG 81 GP PA PGA G P PG G V PH E GSG Sbjct: 305 GPTGGRPAA----PGAPGTPAAPGPGGGAAVPSGATPHPERGSG 344 Score = 28.9 bits (63), Expect = 3.4 Identities = 19/44 (43%), Positives = 19/44 (43%), Gaps = 5/44 (11%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREV-----PHAEEGSG 81 GP PA PGA G P PG G V PH E GSG Sbjct: 180 GPTGGRPAA----PGAPGTPAAPGPGGGAAVPSGATPHPERGSG 219
>HTPX_RHILO (Q98ET0) Probable protease htpX homolog (EC 3.4.24.-)| Length = 336 Score = 28.9 bits (63), Expect = 3.4 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +1 Query: 88 PSSAWGTSRPARWPGSPGRPRAPGW 162 PS WG + A P P RP+A W Sbjct: 300 PSGPWGQAPQAEQPAEPERPKANPW 324
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = -3 Query: 155 GALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 G G PG PG + R P + G G+K + ENGS Sbjct: 208 GFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGS 251 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +1 Query: 82 PDPSSAWGTSRPARWPGSPGRPRAPG 159 P P G + PA PG+PG P PG Sbjct: 1119 PGPRGRSGETGPAGPPGNPGPPGPPG 1144
>CO9A1_MOUSE (Q05722) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = -3 Query: 158 PGALGRPGDPGQRA-GREVPHAEEG-SGIGRIKGI 60 PGA+G PGDPG + G+ E+G G+ I G+ Sbjct: 854 PGAIGLPGDPGPASYGKNGRDGEQGPPGVAGIPGV 888
>CO5A1_MOUSE (O88207) Collagen alpha-1(V) chain precursor| Length = 1838 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/57 (26%), Positives = 25/57 (43%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 P P + PG G+ G PG++ G+ P + G +G+K + R G+ Sbjct: 750 PGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGT 806 Score = 28.5 bits (62), Expect = 4.4 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIG 75 GP P +G +PGA+G G+PG+ +P EG +G Sbjct: 1267 GPQGPPGGIG--NPGAVGEKGEPGEAGDPGLP--GEGGPLG 1303 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEG 87 P +P PA + PG G G+PGQ G P E G Sbjct: 1350 PGEPGPAGQDGPPGDKGDDGEPGQ-TGSPGPTGEPG 1384
>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor| Length = 1763 Score = 28.9 bits (63), Expect = 3.4 Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 8/55 (14%) Frame = -3 Query: 197 GPDQPDPAVG--------EHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIK 57 GP P P+ G E PG G GDPG+ R P +G + G+K Sbjct: 239 GPPGPVPSTGAKGTIIGPEGAPGMKGEKGDPGEAGPRGFPGTPGVAGQPGLPGMK 293 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/54 (27%), Positives = 26/54 (48%) Frame = -3 Query: 188 QPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENG 27 QP P PGA G PG PG + + +P G+ ++G+ + + ++G Sbjct: 380 QPGP------PGADGYPGPPGPQGPQGLPGGPGLPGLPGLEGLPGPKGEKGDSG 427
>UL49_BHV1C (P30022) Tegument protein UL49 homolog| Length = 258 Score = 28.9 bits (63), Expect = 3.4 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +1 Query: 82 PDPSSAWGTSRPARWPGSPGRPRAPGWCSPT 174 P ++A + RP + +P P+AP WC PT Sbjct: 136 PPGANAVASGRPLAFSAAPKTPKAP-WCGPT 165
>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1459 Score = 28.9 bits (63), Expect = 3.4 Identities = 14/31 (45%), Positives = 15/31 (48%) Frame = +1 Query: 82 PDPSSAWGTSRPARWPGSPGRPRAPGWCSPT 174 P P+ G PA PG PG P A G PT Sbjct: 322 PGPAGPPGPVGPAGGPGFPGAPGAKGEAGPT 352 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = -3 Query: 155 GALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 G G PG PG + R P + G G+K + ENGS Sbjct: 248 GFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGS 291
>CO9A1_RAT (P20850) Collagen alpha-1(IX) chain (Fragment)| Length = 325 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%) Frame = -3 Query: 158 PGALGRPGDPGQRA-GREVPHAEEG-SGIGRIKGI 60 PGA+G PGDPG + G+ E+G G+ I G+ Sbjct: 258 PGAIGLPGDPGPASYGKNGRDGEQGPPGVAGIPGV 292
>CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragments)| Length = 747 Score = 28.9 bits (63), Expect = 3.4 Identities = 14/31 (45%), Positives = 15/31 (48%) Frame = +1 Query: 82 PDPSSAWGTSRPARWPGSPGRPRAPGWCSPT 174 P P+ G PA PG PG P A G PT Sbjct: 165 PGPAGPPGPVGPAGGPGFPGAPGAKGEAGPT 195 Score = 27.7 bits (60), Expect = 7.5 Identities = 18/58 (31%), Positives = 24/58 (41%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 GP P A G PG PG PG + R P + G G+K + ++GS Sbjct: 82 GPPGPQGARG--FPGT---PGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGZBGS 134
>PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)| Length = 939 Score = 28.9 bits (63), Expect = 3.4 Identities = 21/58 (36%), Positives = 23/58 (39%) Frame = +3 Query: 63 PLYPSYPRPLFGMGNFASCTLARIPGAAKGARVVLPDGGIRLVRPPTTAAELMLEAPG 236 PL PRP G A A PG A G +P RL P + AE APG Sbjct: 245 PLLKGKPRPPAGPAAAAGAAPAA-PGTAPGGTAPVPKEDSRLPAPKGSLAEQDAPAPG 301
>CO6A1_MOUSE (Q04857) Collagen alpha-1(VI) chain precursor| Length = 1025 Score = 28.9 bits (63), Expect = 3.4 Identities = 16/54 (29%), Positives = 24/54 (44%) Frame = -3 Query: 185 PDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 P P + G G+PG PG++ P G +G+K + +R E GS Sbjct: 258 PGPRGDPGYEGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGS 311
>CO5A1_RAT (Q9JI03) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/57 (26%), Positives = 25/57 (43%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 P P + PG G+ G PG++ G+ P + G +G+K + R G+ Sbjct: 752 PGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGT 808 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIG 75 GP P +G +PGA+G G+PG+ +P EG +G Sbjct: 1269 GPQGPPGGIG--NPGAVGEKGEPGEAGEPGLP--GEGGPLG 1305 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEG 87 P +P PA + PG G G+PGQ G P E G Sbjct: 1352 PGEPGPAGQDGPPGDKGDDGEPGQ-TGSPGPTGEPG 1386
>CO5A1_CRILO (Q60467) Collagen alpha-1(V) chain precursor| Length = 1840 Score = 28.9 bits (63), Expect = 3.4 Identities = 15/57 (26%), Positives = 25/57 (43%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 P P + PG G+ G PG++ G+ P + G +G+K + R G+ Sbjct: 752 PGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRGVKGADGIRGLKGT 808 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIG 75 GP P +G +PGA+G G+PG+ +P EG +G Sbjct: 1269 GPQGPPGGIG--NPGAVGEKGEPGEAGEPGLP--GEGGPLG 1305 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEG 87 P +P PA + PG G G+PGQ G P E G Sbjct: 1352 PGEPGPAGQDGPPGDKGDDGEPGQ-TGSPGPTGEPG 1386
>CO6A3_CHICK (P15989) Collagen alpha-3(VI) chain precursor| Length = 3137 Score = 28.5 bits (62), Expect = 4.4 Identities = 23/61 (37%), Positives = 25/61 (40%), Gaps = 4/61 (6%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSG----IGRIKGIKERESARNEN 30 GP P +G PG G G PG RAG P A G +GR KG R N Sbjct: 2233 GPQGPPGQIGT--PGIRGEQGIPGPRAGGGQPGAPGERGRIGPLGR-KGEPGNPGPRGPN 2289 Query: 29 G 27 G Sbjct: 2290 G 2290
>COAA1_HUMAN (Q03692) Collagen alpha-1(X) chain precursor| Length = 680 Score = 28.5 bits (62), Expect = 4.4 Identities = 12/23 (52%), Positives = 12/23 (52%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPG 126 P P PA HPG G PG PG Sbjct: 62 PGPPGPAGPRGHPGPSGPPGKPG 84
>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor| Length = 684 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/67 (26%), Positives = 23/67 (34%) Frame = -3 Query: 281 DPAPRLQRARVGQEMPXXXXXXXXXXXRGPDQPDPAVGEHHPGALGRPGDPGQRAGREVP 102 DP PR + G + +GP P G G G PG+PG +P Sbjct: 591 DPGPRGNQGDRGDKGAAGAGLDGPEGDQGPQGPQGVPGTSKDGQDGAPGEPGPPGDPGLP 650 Query: 101 HAEEGSG 81 A G Sbjct: 651 GAIGAQG 657 Score = 23.9 bits (50), Expect(2) = 7.2 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +1 Query: 127 PGSPGRPRAPGWCSPT 174 PG PG P PG+ PT Sbjct: 180 PGPPGPPGMPGFKGPT 195 Score = 22.3 bits (46), Expect(2) = 7.2 Identities = 10/22 (45%), Positives = 10/22 (45%) Frame = +1 Query: 82 PDPSSAWGTSRPARWPGSPGRP 147 P PS G P PG PG P Sbjct: 141 PGPSGLPGLPGPPGPPGPPGHP 162
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/54 (31%), Positives = 22/54 (40%) Frame = -3 Query: 188 QPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENG 27 QP PA + PG+ G G PGQ R +P G G + + A G Sbjct: 268 QPGPAGPKGEPGSPGENGAPGQMGPRGLPGERGRPGPSGPAGARGNDGAPGAAG 321 Score = 28.1 bits (61), Expect = 5.8 Identities = 13/28 (46%), Positives = 15/28 (53%) Frame = +1 Query: 88 PSSAWGTSRPARWPGSPGRPRAPGWCSP 171 P G + PA PG+PG P APG P Sbjct: 1021 PKGDRGETGPAGPPGAPGAPGAPGPVGP 1048 Score = 27.7 bits (60), Expect = 7.5 Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 4/42 (9%) Frame = -3 Query: 197 GPDQPDPAVGEHHP----GALGRPGDPGQRAGREVPHAEEGS 84 GP P G P G GRPG+PG AG P E+GS Sbjct: 885 GPPGPAGKZGSKGPRGETGPAGRPGEPGP-AGPPGPPGEKGS 925
>CONG_BOVIN (P23805) Conglutinin precursor| Length = 371 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = -3 Query: 197 GPDQPDPAVGEHHP-GALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKER 51 G P A+G P GA G PG G R A+ SG+ + +K+R Sbjct: 175 GVTGPSGAIGPQGPSGARGPPGLKGDRGDPGETGAKGESGLAEVNALKQR 224
>MEF2A_MOUSE (Q60929) Myocyte-specific enhancer factor 2A| Length = 498 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 3/61 (4%) Frame = -3 Query: 278 PAPRLQRARVGQEM---PXXXXXXXXXXXRGPDQPDPAVGEHHPGALGRPGDPGQRAGRE 108 P P+ + + QEM P G D+ DP H P LGRP + R Sbjct: 428 PPPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPANTEDRESPS 487 Query: 107 V 105 V Sbjct: 488 V 488
>RS8_ZYMMO (Q5NQ51) 30S ribosomal protein S8| Length = 131 Score = 28.5 bits (62), Expect = 4.4 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Frame = -3 Query: 179 PAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRI---KGIKERESARNEN 30 PA+ HH + +PG RE+P G GI + KG+ AR++N Sbjct: 71 PAI--HHLARVSKPGRRIYSGSRELPRVRNGLGITIVSTPKGVLSDAEARDQN 121
>CK021_HUMAN (Q9P2W6) Protein C11orf21| Length = 132 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 4/36 (11%) Frame = +1 Query: 82 PDPSSAWGTSRPARWPGSPGRP----RAPGWCSPTA 177 P SS G P RW G+PG P APG P A Sbjct: 24 PHLSSQSGVEPPDRWTGTPGWPSRDQEAPGSMMPPA 59
>YLS6_CAEEL (P34391) Putative cuticle collagen F09G8.6| Length = 278 Score = 28.5 bits (62), Expect = 4.4 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGS 84 P P PA + PGA G+ G PG AG E P + G+ Sbjct: 145 PGAPGPAGPDGQPGADGQGGAPGP-AGPEGPAGDAGA 180
>HYDL_STRCO (P42534) Putative polyketide hydroxylase (EC 1.14.13.-) (WhiE ORF| VIII) Length = 627 Score = 28.5 bits (62), Expect = 4.4 Identities = 14/38 (36%), Positives = 16/38 (42%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGS 84 GP P G PG G PG PG G + P G+ Sbjct: 417 GPGGPGGLGGPGGPGGTGGPGGPGGPGGPDGPRGAGGA 454
>EPN1_HUMAN (Q9Y6I3) Epsin-1 (EPS-15-interacting protein 1) (EH domain-binding| mitotic phosphoprotein) Length = 551 Score = 28.5 bits (62), Expect = 4.4 Identities = 11/27 (40%), Positives = 13/27 (48%) Frame = +1 Query: 76 PIPDPSSAWGTSRPARWPGSPGRPRAP 156 P+P + WG P G P RP AP Sbjct: 275 PVPPAADPWGGPAPTPASGDPWRPAAP 301
>M3K12_HUMAN (Q12852) Mitogen-activated protein kinase kinase kinase 12 (EC| 2.7.11.25) (Mixed lineage kinase) (Leucine-zipper protein kinase) (ZPK) (Dual leucine zipper bearing kinase) (DLK) (MAPK-upstream kinase) (MUK) Length = 859 Score = 28.5 bits (62), Expect = 4.4 Identities = 18/57 (31%), Positives = 22/57 (38%), Gaps = 5/57 (8%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGD-----PGQRAGREVPHAEEGSGIGRIKGIKERESAR 39 P P PA G+ P PG PG G P G G+G + +E S R Sbjct: 632 PGSPPPARGDTPPSEGSAPGSTSPDSPGGAKGEPPPPVGPGEGVGLLGTGREGTSGR 688
>HXA5_HUMAN (P20719) Homeobox protein Hox-A5 (Hox-1C)| Length = 270 Score = 28.5 bits (62), Expect = 4.4 Identities = 15/54 (27%), Positives = 18/54 (33%) Frame = -3 Query: 185 PDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 P P HH G G A H G+G G +E A +E S Sbjct: 108 PSPGSDSHHGGKNSLSNSSGASADAGSTHISSREGVGTASGAEEDAPASSEQAS 161
>COAA1_MOUSE (Q05306) Collagen alpha-1(X) chain precursor| Length = 680 Score = 28.1 bits (61), Expect = 5.8 Identities = 13/31 (41%), Positives = 15/31 (48%) Frame = +1 Query: 79 IPDPSSAWGTSRPARWPGSPGRPRAPGWCSP 171 +P A G PA PG PG P +PG P Sbjct: 315 LPGAPGAKGERGPAGHPGEPGLPGSPGNMGP 345
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.1 bits (61), Expect = 5.8 Identities = 13/26 (50%), Positives = 13/26 (50%) Frame = +1 Query: 82 PDPSSAWGTSRPARWPGSPGRPRAPG 159 P P G S PA PG PG P PG Sbjct: 1154 PGPRGRTGDSGPAGPPGPPGPPGPPG 1179 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 Query: 103 GTSRPARWPGSPGRPRAPGWCSP 171 G + PA PG+PG P APG P Sbjct: 1026 GETGPAGPPGAPGAPGAPGPVGP 1048
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 28.1 bits (61), Expect = 5.8 Identities = 13/26 (50%), Positives = 13/26 (50%) Frame = +1 Query: 82 PDPSSAWGTSRPARWPGSPGRPRAPG 159 P P G S PA PG PG P PG Sbjct: 1154 PGPRGRTGDSGPAGPPGPPGPPGPPG 1179 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 Query: 103 GTSRPARWPGSPGRPRAPGWCSP 171 G + PA PG+PG P APG P Sbjct: 1026 GETGPAGPPGAPGAPGAPGPVGP 1048
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 28.1 bits (61), Expect = 5.8 Identities = 17/54 (31%), Positives = 22/54 (40%) Frame = -3 Query: 185 PDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 P P + GA+G PG G +P +GI KG K R E G+ Sbjct: 621 PGPDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGKGEKGETGLRGEIGN 674 Score = 27.3 bits (59), Expect = 9.9 Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 4/62 (6%) Frame = -3 Query: 197 GPDQPDPAVGEH-HPGALGRPGD---PGQRAGREVPHAEEGSGIGRIKGIKERESARNEN 30 GP P GE HPG GRPG+ G + R P G I+G + + + Sbjct: 139 GPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQP 198 Query: 29 GS 24 G+ Sbjct: 199 GA 200
>CO1A2_MOUSE (Q01149) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 28.1 bits (61), Expect = 5.8 Identities = 16/54 (29%), Positives = 22/54 (40%) Frame = -3 Query: 185 PDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 P P + GA+G PG G +P +GI KG K R + G+ Sbjct: 621 PGPDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGKGEKGETGLRGDTGN 674 Score = 27.7 bits (60), Expect = 7.5 Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 4/42 (9%) Frame = -3 Query: 197 GPDQPDPAVGEHHP----GALGRPGDPGQRAGREVPHAEEGS 84 GP P AVG P G G PG+PGQ G P GS Sbjct: 103 GPRGPPGAVGAPGPQGFQGPAGEPGEPGQ-TGPAGPRGPAGS 143
>PEX6_ASHGO (Q74Z13) Peroxisomal biogenesis factor 6 (Peroxin-6)| Length = 1021 Score = 28.1 bits (61), Expect = 5.8 Identities = 18/49 (36%), Positives = 23/49 (46%) Frame = +3 Query: 108 FASCTLARIPGAAKGARVVLPDGGIRLVRPPTTAAELMLEAPGHFLTDA 254 FAS + G GARV L DG + A +L +P HF +DA Sbjct: 235 FASAAVLLRLGVTSGARVTLSDGATSRI-----AKVFVLLSPNHFDSDA 278
>IF2_STRAW (Q82K53) Translation initiation factor IF-2| Length = 1046 Score = 28.1 bits (61), Expect = 5.8 Identities = 17/46 (36%), Positives = 19/46 (41%) Frame = -3 Query: 170 GEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNE 33 G PG GRPG PG R G + G R G K + R E Sbjct: 387 GGGRPGFGGRPGGPGGRGGTQGAFGRPGGPARR--GRKSKRQRRQE 430
>CO4A6_HUMAN (Q14031) Collagen alpha-6(IV) chain precursor| Length = 1691 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = -3 Query: 161 HPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIK 57 +PG LG PG PGQ+ + P GS KG+K Sbjct: 141 YPGLLGPPGLPGQKGSKGDPVLAPGS----FKGMK 171
>CO4A1_CAEEL (P17139) Collagen alpha-1(IV) chain precursor| Length = 1759 Score = 28.1 bits (61), Expect = 5.8 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%) Frame = -3 Query: 158 PGALGRPGDPGQRAGRE----VPHAEEGSGIGRIKGIKERESARNENG 27 PG+ G+PG PGQ+ GRE P +G+ ++G + + ENG Sbjct: 1145 PGSPGQPGYPGQQ-GREGEKGYPGIPGENGLPGLRGQDGQPGLKGENG 1191
>CO9A3_CHICK (P32017) Collagen alpha-3(IX) chain precursor| Length = 675 Score = 28.1 bits (61), Expect = 5.8 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGI 60 GP D GE PG G PG PG + P A +G+ + G+ Sbjct: 37 GPSGKDGIDGE--PGPSGLPGPPGPKGAPGKPGAAGEAGLPGLPGV 80
>CO9A1_CHICK (P12106) Collagen alpha-1(IX) chain precursor| Length = 920 Score = 28.1 bits (61), Expect = 5.8 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 3/47 (6%) Frame = -3 Query: 155 GALGRPGDPGQR---AGREVPHAEEGSGIGRIKGIKERESARNENGS 24 G++G PGDPG R R +P E G +G++ + A GS Sbjct: 701 GSVGNPGDPGSRGPEGSRGLPGMEGPRGAPGPRGLQGEQGAPGLPGS 747 Score = 27.7 bits (60), Expect = 7.5 Identities = 9/17 (52%), Positives = 12/17 (70%) Frame = +1 Query: 127 PGSPGRPRAPGWCSPTA 177 PG PG P PG+C P++ Sbjct: 887 PGPPGPPGPPGYCEPSS 903
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2| Length = 1033 Score = 28.1 bits (61), Expect = 5.8 Identities = 17/46 (36%), Positives = 19/46 (41%) Frame = -3 Query: 170 GEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNE 33 G PG GRPG PG R G + G R G K + R E Sbjct: 374 GGGRPGFGGRPGGPGGRGGTQGAFGRPGGPARR--GRKSKRQRRQE 417 Score = 28.1 bits (61), Expect = 5.8 Identities = 14/28 (50%), Positives = 15/28 (53%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAG 114 GP +P P G PG GRPG G R G Sbjct: 313 GP-RPGPGGGGRGPGGAGRPGGGGGRPG 339
>COL2_CAEEL (P17656) Cuticle collagen 2 precursor| Length = 301 Score = 28.1 bits (61), Expect = 5.8 Identities = 16/41 (39%), Positives = 16/41 (39%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIG 75 GP P PA G G G PG G P A E G G Sbjct: 178 GPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPG 218
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 28.1 bits (61), Expect = 5.8 Identities = 13/25 (52%), Positives = 13/25 (52%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQR 120 P P P H G GRPG PGQR Sbjct: 877 PGFPGPKGPPGHQGKDGRPGHPGQR 901
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIG 75 GP++ G PG G G+PG+ V EEG G+G Sbjct: 1021 GPERGQAGRGLRGPGPRGGLGEPGR---GHVGRGEEGRGVG 1058
>MEF2A_HUMAN (Q02078) Myocyte-specific enhancer factor 2A (Serum response| factor-like protein 1) Length = 507 Score = 27.7 bits (60), Expect = 7.5 Identities = 18/61 (29%), Positives = 23/61 (37%), Gaps = 3/61 (4%) Frame = -3 Query: 278 PAPRLQRARVGQEM---PXXXXXXXXXXXRGPDQPDPAVGEHHPGALGRPGDPGQRAGRE 108 P P+ + + QEM P G D+ DP H P LGRP + R Sbjct: 437 PQPQPPQPQPRQEMGRSPVDSLSSSSSSYDGSDREDPRGDFHSPIVLGRPPNTEDRESPS 496 Query: 107 V 105 V Sbjct: 497 V 497
>IF2_MYCTU (P65131) Translation initiation factor IF-2| Length = 900 Score = 27.7 bits (60), Expect = 7.5 Identities = 26/78 (33%), Positives = 28/78 (35%), Gaps = 6/78 (7%) Frame = -3 Query: 278 PAPRLQRARVGQEMPXXXXXXXXXXXRGPDQPDPAVG---EHHPGAL---GRPGDPGQRA 117 PAPR AR G P P +P AVG PGA GRPG PG Sbjct: 171 PAPRPGTARPGVPRPGASPGSM------PPRPGGAVGGARPPRPGAPRPGGRPGAPGAGR 224 Query: 116 GREVPHAEEGSGIGRIKG 63 G G+G G Sbjct: 225 SDAGGGNYRGGGVGAAPG 242
>IF2_MYCBO (P65132) Translation initiation factor IF-2| Length = 900 Score = 27.7 bits (60), Expect = 7.5 Identities = 26/78 (33%), Positives = 28/78 (35%), Gaps = 6/78 (7%) Frame = -3 Query: 278 PAPRLQRARVGQEMPXXXXXXXXXXXRGPDQPDPAVG---EHHPGAL---GRPGDPGQRA 117 PAPR AR G P P +P AVG PGA GRPG PG Sbjct: 171 PAPRPGTARPGVPRPGASPGSM------PPRPGGAVGGARPPRPGAPRPGGRPGAPGAGR 224 Query: 116 GREVPHAEEGSGIGRIKG 63 G G+G G Sbjct: 225 SDAGGGNYRGGGVGAAPG 242
>NDF2_MOUSE (Q62414) Neurogenic differentiation factor 2 (NeuroD2)| (NeuroD-related factor) (NDRF) Length = 383 Score = 27.7 bits (60), Expect = 7.5 Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 2/56 (3%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVPH--AEEGSGIGRIKGIKERESARNE 33 P QP PA G PG R G E+P E G + G +E E E Sbjct: 37 PPQPPPAPGSGAPGPARAAKPVSLRGGEEIPEPTLAEVKEEGELGGEEEEEEEEEE 92
>IWS1_XENTR (Q505H7) IWS1-like protein| Length = 909 Score = 27.7 bits (60), Expect = 7.5 Identities = 17/40 (42%), Positives = 19/40 (47%) Frame = -3 Query: 143 RPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 RPGDPG A VP + R K E ESAR + S Sbjct: 832 RPGDPGFCARARVPLPSNKDYVVRPKWNVEMESARYQGSS 871
>YQ33_CAEEL (Q09233) Putative cuticle collagen C09G5.3| Length = 283 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = +1 Query: 82 PDPSSAWGTSRPARWPGSPGRPRAPG 159 P S A G P PG+PGRP PG Sbjct: 174 PGKSGAPGGKGPQGPPGTPGRPGQPG 199
>YXWK_CAEEL (Q21184) Putative cuticle collagen F55C10.3| Length = 266 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGRE 108 P P+ +PGA G PG PGQ A E Sbjct: 150 PGNKGPSGPNGNPGAPGAPGQPGQDAPSE 178 Score = 27.7 bits (60), Expect = 7.5 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +1 Query: 103 GTSRPARWPGSPGRPRAPG 159 G + PA PG PGRP PG Sbjct: 70 GAAGPAGTPGKPGRPGKPG 88
>SQT1_CAEEL (P12114) Cuticle collagen sqt-1 (Protein squat-1) (Protein| roller-5) Length = 324 Score = 27.7 bits (60), Expect = 7.5 Identities = 16/56 (28%), Positives = 23/56 (41%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENG 27 P P G +G PG PG++ GR+ H G G +G + +NG Sbjct: 204 PGHPGEQGSSGQIGKIGEPGPPGEK-GRDAEHPIGGPGPKGPRGDQGPTGPAGQNG 258
>CO4A5_CANFA (Q28247) Collagen alpha-5(IV) chain precursor| Length = 1691 Score = 27.7 bits (60), Expect = 7.5 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%) Frame = -3 Query: 194 PDQPDPAVG--EHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIK 57 P P PA+ + +PG G PG PG + +P E G+ GIK Sbjct: 1240 PGSPGPALEGPKGNPGPQGPPGRPGPTGFQGLPGPEGPRGLPGNGGIK 1287 Score = 27.3 bits (59), Expect = 9.9 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 8/64 (12%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGD---PGQ-----RAGREVPHAEEGSGIGRIKGIKERESAR 39 P +P P G PG G PG+ PGQ AG++ + G GI G+ + Sbjct: 1145 PGEPGPVGGGGRPGPPGPPGEKGNPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGLSGQK 1204 Query: 38 NENG 27 + G Sbjct: 1205 GDGG 1208
>CJ095_HUMAN (Q9H7T3) Protein C10orf95| Length = 257 Score = 27.7 bits (60), Expect = 7.5 Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%) Frame = +1 Query: 76 PIPDPSSA-WGTSRPARWPGSPGRPRAPGWCSPT 174 P P P+S RP RWP + R R G C P+ Sbjct: 134 PAPPPASRDCRCRRPRRWPRAGRRGRRAGACKPS 167
>CO9A1_HUMAN (P20849) Collagen alpha-1(IX) chain precursor| Length = 921 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Frame = -3 Query: 158 PGALGRPGDPGQRA-GREVPHAEEG-SGIGRIKGI 60 PGA+G PGDPG + G+ E G G+ I G+ Sbjct: 854 PGAIGLPGDPGPASYGKNGRDGERGPPGLAGIPGV 888 Score = 27.7 bits (60), Expect = 7.5 Identities = 12/23 (52%), Positives = 13/23 (56%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPG 126 P P PA PGA G+PG PG Sbjct: 301 PGPPGPAGEPGKPGAPGKPGTPG 323
>RAIN_MOUSE (Q3U0S6) Ras-interacting protein 1 (Rain)| Length = 961 Score = 27.7 bits (60), Expect = 7.5 Identities = 19/79 (24%), Positives = 26/79 (32%), Gaps = 8/79 (10%) Frame = -3 Query: 275 APRLQRARVGQEMPXXXXXXXXXXXRG--------PDQPDPAVGEHHPGALGRPGDPGQR 120 +PR Q A++G+ P G P P P V GA+ G Sbjct: 27 SPRKQLAKLGRRWPSAASVKSSSSDTGSRSSEPLPPPPPPPHVELRRVGAVKAAGGASGS 86 Query: 119 AGREVPHAEEGSGIGRIKG 63 + + GSG G G Sbjct: 87 RAKRISQLFRGSGAGGAGG 105
>CO4A2_CAEEL (P17140) Collagen alpha-2(IV) chain precursor (Lethal protein 2)| Length = 1758 Score = 27.7 bits (60), Expect = 7.5 Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGS----GIGRI 69 P P P+ + +PG G GD G AG P E GS GIG I Sbjct: 178 PGLPGPSGRDGYPGEKGDRGDTG-NAGPRGPPGEAGSPGNPGIGSI 222 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/44 (29%), Positives = 18/44 (40%) Frame = -3 Query: 158 PGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENG 27 PG G PG PG + +P G G + G+ + E G Sbjct: 936 PGLPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGLNGPKGEPG 979
>TRP_DROME (P19334) Transient receptor potential protein| Length = 1275 Score = 27.7 bits (60), Expect = 7.5 Identities = 16/55 (29%), Positives = 22/55 (40%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNE 33 G +P P G P A G PG+ ++ P G + K ESA+ E Sbjct: 1031 GDQKPTPGAGAPKPQAAGTISKPGESQKKDAPAPPTKPGDTKPAAPKPGESAKPE 1085
>COL14_CAEEL (P18834) Cuticle collagen 14| Length = 345 Score = 27.7 bits (60), Expect = 7.5 Identities = 15/28 (53%), Positives = 16/28 (57%) Frame = -3 Query: 155 GALGRPGDPGQRAGREVPHAEEGSGIGR 72 GA GRPG PGQ G P E G G G+ Sbjct: 274 GAPGRPGPPGQ-PGPAGPPGENGKGGGQ 300
>COEA1_CHICK (P32018) Collagen alpha-1(XIV) chain precursor (Undulin)| Length = 1888 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = +1 Query: 88 PSSAWGTSRPARWPGSPGRPRAPG 159 PS + T A PG PGRP APG Sbjct: 1653 PSQSVSTRTIAGPPGEPGRPGAPG 1676
>NKX61_MOUSE (Q99MA9) Homeobox protein Nkx-6.1| Length = 365 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/37 (35%), Positives = 16/37 (43%), Gaps = 8/37 (21%) Frame = -3 Query: 185 PDPAVGEHHPGALGRP--------GDPGQRAGREVPH 99 P P +G H+PG L P G P Q+ PH Sbjct: 60 PSPPLGSHNPGGLKPPAAGGLSSLGSPPQQLSAATPH 96
>COBA2_HUMAN (P13942) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 27.3 bits (59), Expect = 9.9 Identities = 19/58 (32%), Positives = 27/58 (46%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 GP D G +PG +G PGDPG G P ++G+ KG + + + GS Sbjct: 1255 GPQGDDGPKG--NPGPVGFPGDPGP-PGEGGPRGQDGA-----KGDRGEDGEPGQPGS 1304 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 1/58 (1%) Frame = -3 Query: 197 GPDQPDPAVG-EHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENG 27 G D P G E PG G G G + P G+ I+G+K + + E+G Sbjct: 685 GSDGPPGHPGKEGPPGTKGNQGPSGPQGPLGYPGPRGVKGVDGIRGLKGHKGEKGEDG 742
>CO8A1_HUMAN (P27658) Collagen alpha-1(VIII) chain precursor (Endothelial| collagen) Length = 744 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 11/58 (18%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRA-----------GREVPHAEEGSGIGRIKGIK 57 GP P G PG G PG PG + G P ++G G+ G+K Sbjct: 197 GPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVK 254
>CO1A2_RANCA (O42350) Collagen alpha-2(I) chain precursor| Length = 1355 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/54 (27%), Positives = 23/54 (42%) Frame = -3 Query: 185 PDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENGS 24 P A + HPG GRPG+ G + G+ KGI+ + + G+ Sbjct: 129 PGKAGEDGHPGKSGRPGERGPVGPQGARGFPGTPGLPGFKGIRGHTGSDGQKGA 182
>CL43_BOVIN (P42916) Collectin-43 precursor (CL-43) (43 kDa collectin)| Length = 321 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGR 111 GP P A+G PG G GDPG++ R Sbjct: 133 GPQGPSGAMGP--PGLKGDRGDPGEKGAR 159
>M3K12_MOUSE (Q60700) Mitogen-activated protein kinase kinase kinase 12 (EC| 2.7.11.25) (Mixed lineage kinase) (Leucine-zipper protein kinase) (ZPK) (Dual leucine zipper bearing kinase) (DLK) (MAPK-upstream kinase) (MUK) Length = 888 Score = 27.3 bits (59), Expect = 9.9 Identities = 17/60 (28%), Positives = 22/60 (36%), Gaps = 5/60 (8%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGD-----PGQRAGREVPHAEEGSGIGRIKGIKERESARNEN 30 P P P G+ P PG PG G P G G+G + +E + R N Sbjct: 665 PGSPPPPQGDTPPSEGSAPGSTSPDSPGGAKGEPPPPVGPGEGVGLLGTGREGTAGRGGN 724
>CO9A2_CHICK (P12108) Collagen alpha-2(IX) chain precursor| Length = 677 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = +1 Query: 103 GTSRPARWPGSPGRPRAPGWCSPTA 177 G A PGSPG PG+C P A Sbjct: 642 GVPGDAGRPGSPGPAGLPGFCEPAA 666
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 Query: 103 GTSRPARWPGSPGRPRAPGWCSP 171 G + PA PG+PG P APG P Sbjct: 1037 GETGPAGPPGAPGAPGAPGPVGP 1059
>COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-3) (Protein| dumpy-15) Length = 296 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/23 (52%), Positives = 12/23 (52%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPG 126 P P PA PG GRPG PG Sbjct: 99 PGPPGPAGAPGKPGKPGRPGAPG 121
>COL19_CAEEL (P18835) Cuticle collagen 19 precursor| Length = 289 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/26 (46%), Positives = 13/26 (50%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQR 120 GP + P PGA GRPG G R Sbjct: 178 GPGEQGPQGDAGRPGAAGRPGPAGPR 203
>COBA1_MOUSE (Q61245) Collagen alpha-1(XI) chain precursor| Length = 1804 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = -3 Query: 197 GPDQPDPAVGEHHPGALGRPGDPGQRAGREVPHAEEGSG 81 GP D G +PG +G PGDPG G P ++G G Sbjct: 1295 GPPGDDGPKG--NPGPVGFPGDPGP-PGEPGPAGQDGVG 1330
>C1QC_HUMAN (P02747) Complement C1q subcomponent subunit C precursor| Length = 245 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = -3 Query: 158 PGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENG 27 PG G PG PG+ +P + GI I GI+ + + E G Sbjct: 36 PGMPGLPGAPGKDGYDGLPGPKGEPGIPAIPGIRGPKGQKGEPG 79
>COBA1_HUMAN (P12107) Collagen alpha-1(XI) chain precursor| Length = 1806 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = -3 Query: 158 PGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENG 27 PG GRPG G R P A+ G + G+ + R E G Sbjct: 576 PGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERG 619
>COBA1_BOVIN (Q28083) Collagen alpha-1(XI) chain precursor (Fragment)| Length = 911 Score = 27.3 bits (59), Expect = 9.9 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = -3 Query: 158 PGALGRPGDPGQRAGREVPHAEEGSGIGRIKGIKERESARNENG 27 PG GRPG G R P A+ G + G+ + R E G Sbjct: 343 PGKRGRPGADGGRGMPGEPGAKGDRGFDGLPGLPGDKGHRGERG 386
>TMBI1_MOUSE (Q8BJZ3) Transmembrane BAX inhibitor motif-containing protein 1| (RECS1 protein) (Responsive to centrifugal force and shear stress gene 1 protein) Length = 309 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +3 Query: 15 PSPTPILIPRTLSFFYPLYPSYPRPLFG 98 P P P L YP YP+YP+P +G Sbjct: 21 PPPGGYGQPSVLPGGYPAYPAYPQPGYG 48
>EXOC2_ARATH (Q8S3U9) Exocyst complex component 2 (Exocyst complex component| Sec5) Length = 1090 Score = 27.3 bits (59), Expect = 9.9 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%) Frame = -3 Query: 137 GDPGQRAGREVPHAEEGSGIGRIKGIKERESARNE-NGSW 21 GD RE+ + G+G GR ++E+ AR E +G+W Sbjct: 88 GDDDLEREREIGGSSGGAGRGRGSDVREKGRARKEDDGAW 127
>CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 27.3 bits (59), Expect = 9.9 Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 8/53 (15%) Frame = -3 Query: 194 PDQPDPAVGEHHPGALGRPGDPGQRAGREVP--------HAEEGSGIGRIKGI 60 P P P + PG +G PG PG+ +P E G G+ +KG+ Sbjct: 692 PGPPGPKGVDGLPGDMGPPGTPGRPGFNGLPGNPGVQGQKGEPGVGLPGLKGL 744 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,817,678 Number of Sequences: 219361 Number of extensions: 675208 Number of successful extensions: 6969 Number of sequences better than 10.0: 134 Number of HSP's better than 10.0 without gapping: 2981 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6441 length of database: 80,573,946 effective HSP length: 82 effective length of database: 62,586,344 effective search space used: 1502072256 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
