ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet101g06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_192091.1| Oryza sativa (japonica cultivar-group), predic... 117 2e-23
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 117 2e-23
3dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic D... 117 2e-23
4dbj|AK110784.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 2e-23
5gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome... 62 1e-06
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 62 1e-06
7gb|AC165249.2| Mus musculus BAC clone RP24-157P13 from chromosom... 46 0.069
8gb|AC117677.9| Mus musculus chromosome 7, clone RP23-421G2, comp... 44 0.27
9gb|AC138618.5| Mus musculus BAC clone RP23-335D4 from chromosome... 44 0.27
10gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 44 0.27
11emb|AJ507169.1|HEC507169 Hepatitis C virus partial gene for poly... 44 0.27
12gb|AF050455.1| Zea mays gypsy/Ty3-type retrotransposon Tekay, co... 42 1.1
13gb|AY913771.1| Pseudomonas aeruginosa isolate PS 83 class 1 inte... 42 1.1
14gb|AC134842.3| Mus musculus BAC clone RP24-375P18 from chromosom... 42 1.1
15emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 1.1
16gb|AF123535.1| Zea mays alcohol dehydrogenase 1 (adh1) gene, adh... 42 1.1
17gb|AY560837.1| Pseudomonas aeruginosa class 1 integron In100, pa... 40 4.2
18gb|L06822.4|PLPDHOS Escherichia coli plasmid pSa, partial sequence 40 4.2
19gb|AY775051.1| Pseudomonas aeruginosa class 1 integron In102 int... 40 4.2
20gb|AC160982.5| Mus musculus BAC clone RP23-351J19 from chromosom... 40 4.2
21ref|XM_522325.1| PREDICTED: Pan troglodytes similar to Fibroblas... 40 4.2
22ref|XM_517209.1| PREDICTED: Pan troglodytes similar to RIKEN cDN... 40 4.2
23ref|NM_020996.1| Homo sapiens fibroblast growth factor 6 (FGF6),... 40 4.2
24gb|DQ219465.1| Pseudomonas aeruginosa In99 class 1 integron, par... 40 4.2
25gb|AF550679.1| Escherichia coli plasmid p1658/97, complete sequence 40 4.2
26gb|AY348316.1| Salmonella enterica subsp. enterica serovar Typhi... 40 4.2
27gb|AY152821.1| Escherichia coli class I integron integrase (intI... 40 4.2
28gb|AY740681.1| Aeromonas punctata class 1 integron In39, partial... 40 4.2
29gb|AY507153.1| Pseudomonas aeruginosa strain 4122 class I integr... 40 4.2
30gb|AY458016.1| Escherichia coli plasmid pC15-1a, complete sequence 40 4.2
31gb|AY033653.2| Pseudomonas aeruginosa isolate 96 plasmid pOZ176 ... 40 4.2
32gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 4.2
33gb|AY509609.1| Pseudomonas aeruginosa class I integron OXA-like ... 40 4.2
34gb|AE013203.1| Thermoanaerobacter tengcongensis MB4, section 230... 40 4.2
35gb|AY660529.1| Pseudomonas aeruginosa integron In163, complete s... 40 4.2
36gb|AC109627.8| Mus musculus chromosome 16, clone RP24-226M22, co... 40 4.2
37gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 4.2
38gb|AY557339.1| Acinetobacter baumannii strain 1-43 class I integ... 40 4.2
39gb|AY581424.1| Homo sapiens fibroblast growth factor 6 (FGF6) ge... 40 4.2
40gb|DQ174291.1| Acinetobacter haemolyticus strain 99-24854 type 1... 40 4.2
41gb|DQ089809.1| Pseudomonas aeruginosa class I integron In120 Aac... 40 4.2
42gb|AY913772.1| Pseudomonas aeruginosa isolate PS 158 class 1 int... 40 4.2
43gb|DQ153218.1| Klebsiella pneumoniae isolate YMC 03/10/U1702 cla... 40 4.2
44gb|DQ153217.1| Klebsiella pneumoniae isolate YMC 03/7/P267 class... 40 4.2
45gb|AY307114.1| Acinetobacter baumannii class 1 integron 6'-N-ace... 40 4.2
46gb|AY007784.1| Acinetobacter baumannii transposon IntAb74 aminog... 40 4.2
47gb|AY294333.1| Pseudomonas aeruginosa strain MB-7 class I integr... 40 4.2
48emb|AJ744860.1| uncultured bacterium pTB11 plasmid complete genome 40 4.2
49gb|AC146219.2| Pan troglodytes BAC clone CH251-284M11 from Y, co... 40 4.2
50gb|AY162283.2| Citrobacter freundii transposon class I integron ... 40 4.2
51emb|AJ628135.2| Pseudomonas aeruginosa Tn5051-like transposon an... 40 4.2
52gb|AY220520.1| Salmonella enterica subsp. enterica class 1 integ... 40 4.2
53gb|AF439786.3| Campylobacter jejuni isolate B7W3 integron INTI1 ... 40 4.2
54gb|AF439785.3| Campylobacter jejuni isolate B6W4 integron INTI1 ... 40 4.2
55gb|AF371964.1| Burkholderia cepacia class I integron beta-lactam... 40 4.2
56gb|AF450245.1| Mus musculus clone BAC199M11, complete sequence 40 4.2
57gb|DQ141317.1| Klebsiella pneumoniae class I integron aminoglyco... 40 4.2
58emb|AM040449.1| Klebsiella pneumoniae partial integron InK13 40 4.2
59emb|AJ609296.1| Klebsiella pneumoniae intI1 gene (partial), blaI... 40 4.2
60gb|AY922989.1| Acinetobacter baumannii isolate 6B(P) class I int... 40 4.2
61gb|AY219651.1| Klebsiella pneumoniae transposon class 3 integron... 40 4.2
62gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 4.2
63gb|AY139595.1| Uncultured bacterium plasmid-encoded class I inte... 40 4.2
64gb|AY139594.1| Uncultured bacterium plasmid-encoded class I inte... 40 4.2
65gb|AY139593.1| Uncultured bacterium plasmid-encoded class I inte... 40 4.2
66gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 4.2
67gb|AY259086.1| Escherichia coli plasmid pHSH2 encoded class 1 in... 40 4.2
68gb|AC073562.6| Mus musculus strain C57BL/6J chromosome 12 clone ... 40 4.2
69emb|Y18050.2|PAE18050 Pseudomonas aeruginosa intI1, blaVIM, aacA... 40 4.2
70emb|X98393.1|PACATAAC6 Pseudomonas aeruginosa plasmid genes, cat... 40 4.2
71emb|X63454.1|HSHST2 H.sapiens hst-2 (FGF-6) mRNA 40 4.2
72emb|X57075.1|HSFGF6 H.sapiens FGF6 gene 40 4.2
73gb|AY920928.1| Pseudomonas aeruginosa transposon Tn5393C TnpA (t... 40 4.2
74gb|AY702100.1| Pseudomonas aeruginosa class I integron 6'-N-amin... 40 4.2
75emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 4.2
76gb|DQ139279.1| Pseudomonas aeruginosa isolate PS99 class 1 integ... 40 4.2
77gb|DQ139276.1| Pseudomonas aeruginosa isolate PS109 class 1 inte... 40 4.2
78gb|AY123251.1| Salmonella enterica subsp. enterica serovar Typhi... 40 4.2
79emb|AJ621187.1| Morganella morganii subsp. morganii class 1 inte... 40 4.2
80emb|AJ620678.1| Pseudomonas aeruginosa intI1 gene (partial), bla... 40 4.2
81emb|AJ584652.2| Pseudomonas aeruginosa inti1 gene (partial), bla... 40 4.2
82emb|AJ581665.1|PAE581665 Pseudomonas aeruginosa insertion sequen... 40 4.2
83emb|AJ581664.1|PAE581664 Pseudomonas aeruginosa insertion sequen... 40 4.2
84emb|AJ515707.1|PAE515707 Pseudomonas aeruginosa tnpR gene (parti... 40 4.2
85emb|AJ487034.1|SEN487034 Salmonella enteritidis class 1 integron... 40 4.2
86emb|AJ439689.1|PPU439689 Pseudomonas putida partial pVA304 plasm... 40 4.2
87gb|AY987853.1| Klebsiella pneumoniae plasmid pMVH202 class 1 int... 40 4.2
88gb|AY970968.1| Escherichia coli plasmid pMVH202 class 1 integron... 40 4.2
89emb|AJ319747.1|ABA319747 Acinetobacter baumannii intI1 gene (par... 40 4.2
90emb|AJ311891.2|SIN311891 Salmonella enterica subsp. enterica ser... 40 4.2
91emb|AJ295229.1|PAE295229 Pseudomonas aeruginosa intI1 gene (part... 40 4.2
92emb|AJ291609.1|PAE291609 Pseudomonas aeruginosa intI1 gene (part... 40 4.2
93emb|AJ243491.1|ABA243491 Acinetobacter baumannii partial intI1 g... 40 4.2
94gb|AF445082.1| Acinetobacter baumannii integron class I integras... 40 4.2
95emb|AJ223604.1|PAE223604 Pseudomonas aeruginosa integron In 101 DNA 40 4.2
96emb|AJ009820.2|STY9820 Salmonella typhimurium plasmid pSEM parti... 40 4.2
97ref|NM_001029870.1| Homo sapiens similar to RIKEN cDNA 5730467H2... 40 4.2
98emb|AJ784805.1| Pseudomonas aeruginosa partial integron, isolate... 40 4.2
99emb|AJ784804.1| Pseudomonas aeruginosa partial integron, isolate... 40 4.2
100emb|AJ784256.1| Pseudomonas aeruginosa partial intI1 gene, blaVI... 40 4.2
101gb|DQ112222.1| Achromobacter denitrificans isolate YMC/HMC 23351... 40 4.2
102gb|AF369871.1| Acinetobacter genomosp. 3 class I integron DNA in... 40 4.2
103gb|AF470625.1| Mus musculus LIM-protein (Hlp) gene, complete cds 40 4.2
104dbj|BS000619.1| Pan troglodytes chromosome Y clone:PTB-493L21, c... 40 4.2
105dbj|BS000603.1| Pan troglodytes chromosome Y clone:PTB-616H14, c... 40 4.2
106gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 40 4.2
107gb|AF418284.1| Pseudomonas aeruginosa isolate YMC 95012105 class... 40 4.2
108dbj|AB219236.1| Vibrio cholerae O1 aar-3, aacA4, dfrA1 genes, co... 40 4.2
109dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 4.2
110gb|AC008012.8| Homo sapiens 12p13 BAC RPCI11-388F6 (Roswell Park... 40 4.2
111gb|DQ393784.1| Pseudomonas aeruginosa strain N2-1 class I integr... 40 4.2
112gb|DQ393781.1| Pseudomonas aeruginosa strain N2-15 class I integ... 40 4.2
113gb|AF315351.1|AF315351 Pseudomonas aeruginosa integron integrase... 40 4.2
114dbj|AK158081.1| Mus musculus adult inner ear cDNA, RIKEN full-le... 40 4.2
115gb|BC102475.1| Bos taurus B-cell CLL/lymphoma 7B, mRNA (cDNA clo... 40 4.2
116gb|AF322577.2|AF322577 Klebsiella pneumoniae plasmid pEKP0787-1 ... 40 4.2
117gb|AY912492.1| Escherichia coli class I integron chloramphenicol... 40 4.2
118gb|S45954.1| aminoglycoside 6'-N-acetyltransferase [Salmonella t... 40 4.2
119gb|DQ321671.1| Shigella sonnei plasmid pSS2852 multidrug-resista... 40 4.2
120gb|DQ370505.1| Acinetobacter baumannii strain P17 class 1 integr... 40 4.2
121gb|AF199025.3| Sinorhizobium medicae two component sensor protei... 40 4.2
122gb|AF355189.1| Pseudomonas aeruginosa integron In60 integrase In... 40 4.2
123gb|AF318077.1| Pseudomonas aeruginosa integron InAB1 aminoglycos... 40 4.2
124gb|AF315786.1| Pseudomonas aeruginosa class I integron integrase... 40 4.2
125gb|AY029772.1| Pseudomonas aeruginosa isolate YMC704 class I int... 40 4.2
126gb|AF282595.1| Klebsiella pneumoniae integron INTCZD37 DNA integ... 40 4.2
127gb|AF263520.1| Pseudomonas aeruginosa integron In58, partial seq... 40 4.2
128gb|AF207065.1| Klebsiella pneumoniae DNA integrase (int) gene, p... 40 4.2
129gb|AF202035.1| Enterobacter cloacae integron In14pr44/16 DNA int... 40 4.2
130gb|AF416297.1| Serratia marcescens class 3 integron, partial seq... 40 4.2
131gb|AF227505.1| Klebsiella pneumoniae plasmid pY2 class 1 integro... 40 4.2
132gb|AY065966.1| Pseudomonas putida class I integron DNA integrase... 40 4.2
133gb|AY878717.1| Escherichia coli plasmid pKO97, partial sequence 40 4.2
134gb|AF231133.1|AF231133 Pseudomonas aeruginosa INTI1 (intI1) gene... 40 4.2
135gb|AC104687.3| Homo sapiens BAC clone RP11-123J14 from 4, comple... 40 4.2
136gb|AY260546.3| Escherichia coli plasmid pAK33 insertion sequence... 40 4.2
137gb|AY038837.2| Acinetobacter baumannii type 1 integron IntI gene... 40 4.2
138gb|AF317511.1| Pseudomonas aeruginosa integron In80 class 1 DNA ... 40 4.2
139gb|AY136758.1| Salmonella typhimurium plasmid pSTI1 class I inte... 40 4.2
140gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 4.2
141gb|AF024602.1|AF024602 Pseudomonas aeruginosa integrase (tnpI) g... 40 4.2
142gb|AF043381.1|AF043381 Pseudomonas aeruginosa integrase (intI) g... 40 4.2
143gb|AF156486.1|AF156486 Klebsiella pneumoniae integron integrase ... 40 4.2
144dbj|AB188812.1| Pseudomonas aeruginosa class 1 integron intI1, b... 40 4.2
145gb|AY954726.1| Pseudomonas aeruginosa transposon class 1 integro... 40 4.2
146emb|AJ507182.1|HEC507182 Hepatitis C virus partial gene for poly... 40 4.2
147emb|X68227.1|ECPSAAAD E.coli plasmid pSa aadA2 gene for streptom... 40 4.2
148gb|AF188155.1|AF188155 Oxytricha nova clone 55 unknown protein g... 40 4.2
149gb|AY907717.1| Pseudomonas putida isolate YMC 98/2/665 class I i... 40 4.2
150gb|U90945.1|KOU90945 Klebsiella oxytoca plasmid pACM1 quaternary... 40 4.2
151emb|AJ697861.1| Gram-negative bacterium TR-59 aac6'-Ib gene for ... 40 4.2
152emb|AJ313334.1|ABA313334 Acinetobacter baumannii partial intI1 g... 40 4.2
153gb|AY887109.1| Providencia rettgeri class 1 integron, complete s... 40 4.2
154emb|CT571273.12| Mouse DNA sequence from clone RP23-48L21 on chr... 40 4.2
155emb|AM087410.1| Pseudomonas aeruginosa class 1 integron containi... 40 4.2
156emb|AM087408.1| Pseudomonas aeruginosa class 1 integron containi... 40 4.2
157emb|AM087404.1| Pseudomonas aeruginosa class 1 integron containi... 40 4.2
158emb|AM183120.1| Enterobacter cloacae partial integron In71 40 4.2
159gb|U59183.1|PAU59183 Pseudomonas aeruginosa integrase (int) gene... 40 4.2
160emb|AJ971343.1| Klebsiella pneumoniae partial pRBDHA plasmid 40 4.2
161emb|AM040709.1| Escherichia coli intI1 gene (partial), aac(6')1b... 40 4.2
162gb|AY686225.1| Achromobacter xylosoxidans class I integron DNA i... 40 4.2
163gb|DQ287356.1| Pseudomonas aeruginosa class I integron metallo-b... 40 4.2
164gb|AY866525.1| Pseudomonas aeruginosa class I integron integrase... 40 4.2
165ref|NM_001034775.1| Bos taurus B-cell CLL/lymphoma 7B (BCL7B), mRNA 40 4.2
166gb|AC161112.5| Mus musculus BAC clone RP24-468O24 from chromosom... 40 4.2
167gb|M11444.1|PLPPSASPR Plasmid pSa DNA region containing the Sp-R... 40 4.2
168dbj|AB070224.1| Serratia marcescens tniC, intI3, blaIMP, aac6'-I... 40 4.2 
>ref|NM_192091.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1938

 Score =  117 bits (59), Expect = 2e-23
 Identities = 101/115 (87%)
 Strand = Plus / Plus

                                                                        
Query: 206  ggcggcggagctgatgctcgaggcgccggggcatttcctgaccgacgcgcgcgcgctgca 265
            |||||||||||||||||||||||||||||| || |||||  | |||||||||||||||| 
Sbjct: 1482 ggcggcggagctgatgctcgaggcgccgggccacttcctcgcggacgcgcgcgcgctgcg 1541

                                                                   
Query: 266  ggcggggcgccggatcgaggcgctcgcggctgacgaggagctcgagctcgggggc 320
            ||||||| |  |||||| ||||||||  || |||||||| |||||||||||||||
Sbjct: 1542 ggcggggggaaggatcgcggcgctcggcgccgacgaggacctcgagctcgggggc 1596
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  117 bits (59), Expect = 2e-23
 Identities = 101/115 (87%)
 Strand = Plus / Plus

                                                                            
Query: 206      ggcggcggagctgatgctcgaggcgccggggcatttcctgaccgacgcgcgcgcgctgca 265
                |||||||||||||||||||||||||||||| || |||||  | |||||||||||||||| 
Sbjct: 28282862 ggcggcggagctgatgctcgaggcgccgggccacttcctcgcggacgcgcgcgcgctgcg 28282921

                                                                       
Query: 266      ggcggggcgccggatcgaggcgctcgcggctgacgaggagctcgagctcgggggc 320
                ||||||| |  |||||| ||||||||  || |||||||| |||||||||||||||
Sbjct: 28282922 ggcggggggaaggatcgcggcgctcggcgccgacgaggacctcgagctcgggggc 28282976
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>dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0478H03
          Length = 167560

 Score =  117 bits (59), Expect = 2e-23
 Identities = 101/115 (87%)
 Strand = Plus / Plus

                                                                          
Query: 206    ggcggcggagctgatgctcgaggcgccggggcatttcctgaccgacgcgcgcgcgctgca 265
              |||||||||||||||||||||||||||||| || |||||  | |||||||||||||||| 
Sbjct: 117369 ggcggcggagctgatgctcgaggcgccgggccacttcctcgcggacgcgcgcgcgctgcg 117428

                                                                     
Query: 266    ggcggggcgccggatcgaggcgctcgcggctgacgaggagctcgagctcgggggc 320
              ||||||| |  |||||| ||||||||  || |||||||| |||||||||||||||
Sbjct: 117429 ggcggggggaaggatcgcggcgctcggcgccgacgaggacctcgagctcgggggc 117483
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>dbj|AK110784.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-C05, full
           insert sequence
          Length = 796

 Score =  117 bits (59), Expect = 2e-23
 Identities = 101/115 (87%)
 Strand = Plus / Plus

                                                                       
Query: 206 ggcggcggagctgatgctcgaggcgccggggcatttcctgaccgacgcgcgcgcgctgca 265
           |||||||||||||||||||||||||||||| || |||||  | |||||||||||||||| 
Sbjct: 225 ggcggcggagctgatgctcgaggcgccgggccacttcctcgcggacgcgcgcgcgctgcg 284

                                                                  
Query: 266 ggcggggcgccggatcgaggcgctcgcggctgacgaggagctcgagctcgggggc 320
           ||||||| |  |||||| ||||||||  || |||||||| |||||||||||||||
Sbjct: 285 ggcggggggaaggatcgcggcgctcggcgccgacgaggacctcgagctcgggggc 339
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>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23,
              complete sequence
          Length = 191765

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                         
Query: 202    cgacggcggcggagctgatgctcgaggcgccggggcatttcctgaccgacgcgcgcgcg 260
              |||||||||||||||||||| | || |||||||| || |||||| | ||||||||||||
Sbjct: 154022 cgacggcggcggagctgatgatggacgcgccgggccacttcctggcggacgcgcgcgcg 153964
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Minus

                                                                           
Query: 202      cgacggcggcggagctgatgctcgaggcgccggggcatttcctgaccgacgcgcgcgcg 260
                |||||||||||||||||||| | || |||||||| || |||||| | ||||||||||||
Sbjct: 27279054 cgacggcggcggagctgatgatggacgcgccgggccacttcctggcggacgcgcgcgcg 27278996
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>gb|AC165249.2| Mus musculus BAC clone RP24-157P13 from chromosome 12, complete sequence
          Length = 193902

 Score = 46.1 bits (23), Expect = 0.069
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 48     ctctctttcttttatcccctttatcct 74
              ||||||||||||| |||||||||||||
Sbjct: 150024 ctctctttcttttctcccctttatcct 150050
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>gb|AC117677.9| Mus musculus chromosome 7, clone RP23-421G2, complete sequence
          Length = 249789

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 47     tctctctttcttttatcccctttatccttc 76
              |||||||||||||| |||||| ||||||||
Sbjct: 229874 tctctctttcttttttcccctctatccttc 229903
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>gb|AC138618.5| Mus musculus BAC clone RP23-335D4 from chromosome 7, complete sequence
          Length = 189419

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 47     tctctctttcttttatcccctttatccttc 76
              |||||||||||||| |||||| ||||||||
Sbjct: 134487 tctctctttcttttttcccctctatccttc 134458
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 150     ggcgccagggtggtgctccccgacggcggg 179
               |||| ||||||||||||| |||||||||||
Sbjct: 2627470 ggcgacagggtggtgctctccgacggcggg 2627499
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>emb|AJ507169.1|HEC507169 Hepatitis C virus partial gene for polyprotein, genomic RNA, isolate
            SR4
          Length = 1341

 Score = 44.1 bits (22), Expect = 0.27
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 191  caggcccccgacgacggcggcg 212
            ||||||||||||||||||||||
Sbjct: 1195 caggcccccgacgacggcggcg 1216
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>gb|AF050455.1| Zea mays gypsy/Ty3-type retrotransposon Tekay, complete sequence
          Length = 12118

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 32    tctcattcctcgcactctctc 52
             |||||||||||||||||||||
Sbjct: 10063 tctcattcctcgcactctctc 10083



 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 32  tctcattcctcgcactctctc 52
           |||||||||||||||||||||
Sbjct: 921 tctcattcctcgcactctctc 941
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>gb|AY913771.1| Pseudomonas aeruginosa isolate PS 83 class 1 integron, partial
            sequence
          Length = 2556

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 137  cggggcggccaagggcgccag 157
            |||||||||||||||||||||
Sbjct: 1496 cggggcggccaagggcgccag 1476
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>gb|AC134842.3| Mus musculus BAC clone RP24-375P18 from chromosome 14, complete sequence
          Length = 154676

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 49     tctctttcttttatccccttt 69
              |||||||||||||||||||||
Sbjct: 108638 tctctttcttttatccccttt 108618
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 278    gatcgaggcgctcgcggctga 298
              |||||||||||||||||||||
Sbjct: 866091 gatcgaggcgctcgcggctga 866111
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>gb|AF123535.1| Zea mays alcohol dehydrogenase 1 (adh1) gene, adh1-F allele, complete
            cds
          Length = 160480

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 32   tctcattcctcgcactctctc 52
            |||||||||||||||||||||
Sbjct: 6284 tctcattcctcgcactctctc 6264
to top
>gb|AY560837.1| Pseudomonas aeruginosa class 1 integron In100, partial sequence
          Length = 4003

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2056 ggggcggccaagggcgccag 2037
to top
>gb|L06822.4|PLPDHOS Escherichia coli plasmid pSa, partial sequence
          Length = 10953

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1995 ggggcggccaagggcgccag 1976
to top
>gb|AY775051.1| Pseudomonas aeruginosa class 1 integron In102 integrase (IntI1) gene,
            partial cds, aminoglycoside (6') N-acetyltransferase
            (aacA4), aminoglycoside (3') N-acetyltransferase (aacC1),
            and VIM-2 metallo beta-lactamase (blaVIM-2) genes,
            complete cds, and unknown gene
          Length = 2652

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1120 ggggcggccaagggcgccag 1101
to top
>gb|AC160982.5| Mus musculus BAC clone RP23-351J19 from chromosome 12, complete
            sequence
          Length = 231693

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 256  gcgcgctgcaggcggggcgc 275
            ||||||||||||||||||||
Sbjct: 1842 gcgcgctgcaggcggggcgc 1823
to top
>ref|XM_522325.1| PREDICTED: Pan troglodytes similar to Fibroblast growth factor-6
           precursor (FGF-6) (HBGF-6) (HST-2) (LOC466925), mRNA
          Length = 747

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 161 ggtgctccccgacggcgggatcag 184
           |||||||||||||||| |||||||
Sbjct: 297 ggtgctccccgacggccggatcag 320
to top
>ref|XM_517209.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA 5730467H21
           (LOC461234), mRNA
          Length = 2698

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  ttcctcgcactctctctttc 56
           ||||||||||||||||||||
Sbjct: 843 ttcctcgcactctctctttc 862
to top
>ref|NM_020996.1| Homo sapiens fibroblast growth factor 6 (FGF6), mRNA
          Length = 744

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 161 ggtgctccccgacggcgggatcag 184
           |||||||||||||||| |||||||
Sbjct: 341 ggtgctccccgacggccggatcag 364
to top
>gb|DQ219465.1| Pseudomonas aeruginosa In99 class 1 integron, partial sequence
          Length = 3805

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1733 ggggcggccaagggcgccag 1714
to top
>gb|AF550679.1| Escherichia coli plasmid p1658/97, complete sequence
          Length = 125491

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   ggggcggccaagggcgccag 157
             ||||||||||||||||||||
Sbjct: 83304 ggggcggccaagggcgccag 83323
to top
>gb|AY348316.1| Salmonella enterica subsp. enterica serovar Typhi class I integron
            DNA integrase (intI1) gene, partial cds; aminoglycoside
            acetyltransferase (aacA6'-Ib) and oxacillinase
            (blaOXA-1-like) genes, complete cds; quaternary ammonium
            compound (qacEdelta1) gene, partial cds; and unknown gene
          Length = 2736

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1150 ggggcggccaagggcgccag 1131
to top
>gb|AY152821.1| Escherichia coli class I integron integrase (intI) gene, partial
           cds; 6'-N-aminoglycoside acetyltransferase aac(6')-Ib
           (aac 6' Ib), blaVIM-1 (vim-1), and quartenary ammonium
           resistance protein (qacEdelta1) genes, complete cds; and
           sulfonamide resistance protein (sulI) gene, partial cds
          Length = 2521

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 945 ggggcggccaagggcgccag 926
to top
>gb|AY740681.1| Aeromonas punctata class 1 integron In39, partial sequence
          Length = 8346

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2154 ggggcggccaagggcgccag 2135
to top
>gb|AY507153.1| Pseudomonas aeruginosa strain 4122 class I integron, partial sequence
          Length = 7201

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 5371 ggggcggccaagggcgccag 5352
to top
>gb|AY458016.1| Escherichia coli plasmid pC15-1a, complete sequence
          Length = 92353

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   ggggcggccaagggcgccag 157
             ||||||||||||||||||||
Sbjct: 11631 ggggcggccaagggcgccag 11650
to top
>gb|AY033653.2| Pseudomonas aeruginosa isolate 96 plasmid pOZ176 class I integron DNA
            integrase (intI1) gene, partial cds, and aminoglycoside
            6'-N-acetyltransferase (aacA4), IMP-9
            metallo-beta-lactamase (blaIMP-9), aminoglycoside N
            (6')-acetyltransferase (aacA4), chloramphenicol
            acetyltransferase variant (catB8), and OXA-10
            beta-lactamase (blaOXA-10) genes, complete cds
          Length = 4474

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2680 ggggcggccaagggcgccag 2661



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1155 ggggcggccaagggcgccag 1136
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 251     cgcgcgcgcgctgcaggcggggcgccgg 278
               |||||||||||||||||||  |||||||
Sbjct: 2140502 cgcgcgcgcgctgcaggcgctgcgccgg 2140475
to top
>gb|AY509609.1| Pseudomonas aeruginosa class I integron OXA-like protein (blaOXA),
            6'-N-aminoglycoside acetyltransferase (aacA4), and VIM-4
            (blaVIM-4) genes, complete cds
          Length = 2756

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1641 ggggcggccaagggcgccag 1622
to top
>gb|AE013203.1| Thermoanaerobacter tengcongensis MB4, section 230 of 244 of the
            complete genome
          Length = 3909

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 49   tctctttcttttatcccctttatc 72
            ||||||||||||||| ||||||||
Sbjct: 3518 tctctttcttttatctcctttatc 3541
to top
>gb|AY660529.1| Pseudomonas aeruginosa integron In163, complete sequence
          Length = 3902

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 724 ggggcggccaagggcgccag 705
to top
>gb|AC109627.8| Mus musculus chromosome 16, clone RP24-226M22, complete sequence
          Length = 176288

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 39     cctcgcactctctctttcttttat 62
              |||| |||||||||||||||||||
Sbjct: 151656 cctctcactctctctttcttttat 151633
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 251     cgcgcgcgcgctgcaggcggggcgccgg 278
               |||||||||||||||||||  |||||||
Sbjct: 3525078 cgcgcgcgcgctgcaggcgctgcgccgg 3525051
to top
>gb|AY557339.1| Acinetobacter baumannii strain 1-43 class I integron Intw1
           aminoglycoside 6'-N-acetyltransferase (aacA4),
           chloramphenicol acetyltransferase (catB8), and
           aminoglycoside 3'-adenyltransferase (aadA1) genes,
           complete cds
          Length = 2496

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 881 ggggcggccaagggcgccag 862
to top
>gb|AY581424.1| Homo sapiens fibroblast growth factor 6 (FGF6) gene, complete cds
          Length = 15377

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 161  ggtgctccccgacggcgggatcag 184
            |||||||||||||||| |||||||
Sbjct: 2285 ggtgctccccgacggccggatcag 2308
to top
>gb|DQ174291.1| Acinetobacter haemolyticus strain 99-24854 type 1 integron rifampin
            ADP-ribosylating transferase (arr-3) and aminoglycoside
            6'-N-acetyltransferase (aacA4) genes, complete cds
          Length = 1395

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1327 ggggcggccaagggcgccag 1308
to top
>gb|DQ089809.1| Pseudomonas aeruginosa class I integron In120 Aac6'-Ib (aacA4),
           Bel-1 (bla(BEL1)), and Smr2 (smr2) genes, complete cds,
           and AadA5 (aadA5) gene, partial cds
          Length = 2445

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 946 ggggcggccaagggcgccag 927
to top
>gb|AY913772.1| Pseudomonas aeruginosa isolate PS 158 class 1 integron, partial
           sequence
          Length = 2591

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 933 ggggcggccaagggcgccag 914
to top
>gb|DQ153218.1| Klebsiella pneumoniae isolate YMC 03/10/U1702 class I integron DNA
            integrase IntI1 (intI1) gene, partial cds, AACA4
            (aac6'-I) and metallo-beta-lactamase VIM-2 (blaVIM-2)
            genes, complete cds, and unknown genes
          Length = 4133

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1170 ggggcggccaagggcgccag 1151
to top
>gb|DQ153217.1| Klebsiella pneumoniae isolate YMC 03/7/P267 class I integron DNA
            integrase IntI1 (intI1) gene, partial cds, AACA4
            (aac6'-I) and metallo-beta-lactamase VIM-2 (blaVIM-2)
            genes, complete cds, and unknown genes
          Length = 4023

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1178 ggggcggccaagggcgccag 1159
to top
>gb|AY307114.1| Acinetobacter baumannii class 1 integron 6'-N-acetyltransferase
           (aacA4), hypothetical protein, and OXA-20 (oxa-20)
           genes, complete cds
          Length = 2230

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 743 ggggcggccaagggcgccag 724
to top
>gb|AY007784.1| Acinetobacter baumannii transposon IntAb74 aminoglycoside
           6'-N-acetyltransferase Ib (aacA4) and oxacillinase
           (oxa-37) genes, complete cds, and unknown gene
          Length = 2051

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 622 ggggcggccaagggcgccag 603
to top
>gb|AY294333.1| Pseudomonas aeruginosa strain MB-7 class I integron, partial sequence
          Length = 2766

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2541 ggggcggccaagggcgccag 2522
to top
>emb|AJ744860.1| uncultured bacterium pTB11 plasmid complete genome
          Length = 68869

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   ggggcggccaagggcgccag 157
             ||||||||||||||||||||
Sbjct: 35811 ggggcggccaagggcgccag 35792
to top
>gb|AC146219.2| Pan troglodytes BAC clone CH251-284M11 from Y, complete sequence
          Length = 144446

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   gtcctgcacgctggccagga 132
             ||||||||||||||||||||
Sbjct: 82384 gtcctgcacgctggccagga 82403
to top
>gb|AY162283.2| Citrobacter freundii transposon class I integron In38 IntI1 integron
            integrase (intI1) gene, partial cds, aminoglycoside (6')
            N-acetyltransferase  AAC(6')-II (aacA4), beta-lactamase
            OXA-4 (bla(OXA-4)), quaternary ammonium compound
            resistance protein (qacEdelta1), dihydropteroate synthase
            (sul1), Orf513 (orf513), dihydrofolate reductase type
            IIIb (dfrA3b), and Orf105 (orf105) genes, complete cds,
            qacEdelta1 pseudogene, complete sequence, and
            dihydropteroate synthase (sul1) gene, partial cds
          Length = 7180

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1009 ggggcggccaagggcgccag 990
to top
>emb|AJ628135.2| Pseudomonas aeruginosa Tn5051-like transposon and class 1 integron
            InPSG, strain MV461
          Length = 4366

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 3724 ggggcggccaagggcgccag 3705
to top
>gb|AY220520.1| Salmonella enterica subsp. enterica class 1 integron DNA integrase
            IntI1 (intI1) gene, partial cds; AACA4 (aacA6'-Ib) and
            blaOXA-1-like genes, complete cds; QacEdelta1
            (qacEdelta1) gene, partial cds; and unknown gene
          Length = 2749

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1150 ggggcggccaagggcgccag 1131
to top
>gb|AF439786.3| Campylobacter jejuni isolate B7W3 integron INTI1 IntI1 gene, partial
            cds; aminoglycoside 6'-N-acetyltransferase (aacA4) gene,
            aac-(6')-Ib allele, complete cds; and unknown gene
          Length = 1057

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1027 ggggcggccaagggcgccag 1008
to top
>gb|AF439785.3| Campylobacter jejuni isolate B6W4 integron INTI1 IntI1 gene, partial
            cds; aminoglycoside 6'-N-acetyltransferase (aacA4) gene,
            aac-(6')-Ib allele, complete cds; and unknown gene
          Length = 1030

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1028 ggggcggccaagggcgccag 1009
to top
>gb|AF371964.1| Burkholderia cepacia class I integron beta-lactamase OXA family and
            aminoglycoside 6'-N-acetyltransferase type 1b genes,
            complete cds
          Length = 1653

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1585 ggggcggccaagggcgccag 1566
to top
>gb|AF450245.1| Mus musculus clone BAC199M11, complete sequence
          Length = 124254

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    gcgcgctgcaggcggggcgc 275
              ||||||||||||||||||||
Sbjct: 113006 gcgcgctgcaggcggggcgc 113025
to top
>gb|DQ141317.1| Klebsiella pneumoniae class I integron aminoglycoside
           6'-N-acetyltransferase (aacA4), chloramphenicol
           acetyltransferase (catB8), and aminoglycoside
           3'-adenyltransferase (aadA1) genes, complete cds
          Length = 2300

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 704 ggggcggccaagggcgccag 685
to top
>emb|AM040449.1| Klebsiella pneumoniae partial integron InK13
          Length = 7540

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1711 ggggcggccaagggcgccag 1692
to top
>emb|AJ609296.1| Klebsiella pneumoniae intI1 gene (partial), blaIMP-4 gene, qacG2
            gene, aacA4 gene and catB3 gene
          Length = 3897

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 3099 ggggcggccaagggcgccag 3080
to top
>gb|AY922989.1| Acinetobacter baumannii isolate 6B(P) class I integron
           aminoglycoside 6'-N-acetyltransferase (aacA4),
           chloramphenicol acetyltransferase (catB8), and
           aminoglycoside 3'-adenyltransferase (aadA1) genes,
           complete cds
          Length = 2381

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 743 ggggcggccaagggcgccag 724
to top
>gb|AY219651.1| Klebsiella pneumoniae transposon class 3 integron IntI3 integrase
            (intI3), GES-1 extended-spectrum beta-lactamase
            (blaGES-1), and OXA/AAC(6')-Ib aminoglycoside
            6'-N-acetyltransferase (blaOXA/aac(6')-Ib) genes,
            complete cds; and putative replication protein RepC
            (repC) gene, partial cds
          Length = 3751

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2806 ggggcggccaagggcgccag 2787
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 252     gcgcgcgcgctgcaggcggg 271
               ||||||||||||||||||||
Sbjct: 4450574 gcgcgcgcgctgcaggcggg 4450555
to top
>gb|AY139595.1| Uncultured bacterium plasmid-encoded class I integron gene cassette
            array quarternary ammonium compound resistance protein
            (qacH), aminoglycoside-6'N-acetyltransferase (aacA4), and
            OrfE-like (orfE-like) genes, complete cds
          Length = 1565

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1235 ggggcggccaagggcgccag 1216
to top
>gb|AY139594.1| Uncultured bacterium plasmid-encoded class I integron gene cassette
            array aminoglycoside-2''-adenylyltransferase (aadB) and
            aminoglycoside-6'N-acetyltransferase (aacA4) genes,
            complete cds
          Length = 1383

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1315 ggggcggccaagggcgccag 1296
to top
>gb|AY139593.1| Uncultured bacterium plasmid-encoded class I integron gene cassette
           array aminoglycoside-3'N-acetyltransferase (aacA4) gene,
           complete cds
          Length = 792

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 724 ggggcggccaagggcgccag 705
to top
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 263     gcaggcggggcgccggatcgaggc 286
               |||||||||||||||| |||||||
Sbjct: 1463026 gcaggcggggcgccggctcgaggc 1463003
to top
>gb|AY259086.1| Escherichia coli plasmid pHSH2 encoded class 1 integron In37,
            complete sequence
          Length = 14872

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2249 ggggcggccaagggcgccag 2230
to top
>gb|AC073562.6| Mus musculus strain C57BL/6J chromosome 12 clone RP23-201H14,
            complete sequence
          Length = 235252

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 256  gcgcgctgcaggcggggcgc 275
            ||||||||||||||||||||
Sbjct: 2336 gcgcgctgcaggcggggcgc 2355
to top
>emb|Y18050.2|PAE18050 Pseudomonas aeruginosa intI1, blaVIM, aacA4, aphA15, aadA1 and
            qacEdelta1 genes
          Length = 6601

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 4735 ggggcggccaagggcgccag 4716
to top
>emb|X98393.1|PACATAAC6 Pseudomonas aeruginosa plasmid genes, cat, aac(6'), imp and tnpI
          Length = 3292

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2651 ggggcggccaagggcgccag 2632
to top
>emb|X63454.1|HSHST2 H.sapiens hst-2 (FGF-6) mRNA
          Length = 744

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 161 ggtgctccccgacggcgggatcag 184
           |||||||||||||||| |||||||
Sbjct: 341 ggtgctccccgacggccggatcag 364
to top
>emb|X57075.1|HSFGF6 H.sapiens FGF6 gene
          Length = 1032

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 161 ggtgctccccgacggcgggatcag 184
           |||||||||||||||| |||||||
Sbjct: 969 ggtgctccccgacggccggatcag 992
to top
>gb|AY920928.1| Pseudomonas aeruginosa transposon Tn5393C TnpA (tnpA) gene, partial
            cds; and integron In109 integrase (intI1) gene, complete
            sequence, GES-9 (bla(GES-9)) gene, complete cds,
            insertion sequence ISPa21, complete sequence, AAC(6')-Ib
            (aacA4) and AADB (aadB) genes, complete cds, insertion
            sequence ISPa21, complete sequence, and unknown gene
          Length = 8003

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 5667 ggggcggccaagggcgccag 5648
to top
>gb|AY702100.1| Pseudomonas aeruginosa class I integron 6'-N-aminoglycoside
           acetyltransferase (aacA4) and VIM-4 (blaVIM-4) genes,
           complete cds
          Length = 1753

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 636 ggggcggccaagggcgccag 617
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 251     cgcgcgcgcgctgcaggcggggcgccgg 278
               |||||||||||||||||||  |||||||
Sbjct: 3266307 cgcgcgcgcgctgcaggcgctgcgccgg 3266280
to top
>gb|DQ139279.1| Pseudomonas aeruginosa isolate PS99 class 1 integron, partial
            sequence
          Length = 1960

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1081 ggggcggccaagggcgccag 1062
to top
>gb|DQ139276.1| Pseudomonas aeruginosa isolate PS109 class 1 integron, partial
           sequence
          Length = 1909

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 683 ggggcggccaagggcgccag 664
to top
>gb|AY123251.1| Salmonella enterica subsp. enterica serovar Typhi R-plasmid pST2301
           class I integron aminoglycoside 6'-N-acetyltransferase
           (aacA4), chloramphenicol acetyltransferase (catB8),
           aminoglycoside 3'-adenyltransferase (aadA1),
           dihydrofolate reductase type I (dhfr1), aminoglycoside
           6'-n-acetyltransferase (aac6-II), and CARB-8
           beta-lactamase (blaCARB-8) genes, complete cds
          Length = 4686

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 767 ggggcggccaagggcgccag 748
to top
>emb|AJ621187.1| Morganella morganii subsp. morganii class 1 integron (In116)
          Length = 8861

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1711 ggggcggccaagggcgccag 1692
to top
>emb|AJ620678.1| Pseudomonas aeruginosa intI1 gene (partial), blaGIM-1 gene,
            aac(6')-1b gene, aadA1 gene (partial), is1394 gene, aadA1
            gene (partial), blaOXA-2 gene, qacEdelta1 gene and sul1
            gene (partial)
          Length = 5768

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2423 ggggcggccaagggcgccag 2404
to top
>emb|AJ584652.2| Pseudomonas aeruginosa inti1 gene (partial), blaIMP-16 gene,
            aac(6')-30/aac(6')-Ib' fused gene, aacA4 gene, aadA1
            gene, qacEdelta1 gene and sul1 gene (partial)
          Length = 4333

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2961 ggggcggccaagggcgccag 2942
to top
>emb|AJ581665.1|PAE581665 Pseudomonas aeruginosa insertion sequence ISPa7 transposon tnpA gene,
            intI1 gene, blaVIM gene, aacA4 gene, aphA15 gene, aadA1
            gene and qacEdelta1 gene (partial), isolate PPV-108
          Length = 6453

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 4587 ggggcggccaagggcgccag 4568
to top
>emb|AJ581664.1|PAE581664 Pseudomonas aeruginosa insertion sequence ISPa7 transposon tnpA gene,
            intI1 gene, blaVIM gene, aacA4 gene, aphA15 gene, aadA1
            gene and qacEdelta1 gene (partial), isolate TS-832035
          Length = 6601

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 4735 ggggcggccaagggcgccag 4716
to top
>emb|AJ515707.1|PAE515707 Pseudomonas aeruginosa tnpR gene (partial), urf2 pseudogene, intI1
            gene, blaVIM-2 gene, aacA4 gene, qacEdelta1 gene and sul1
            gene (partial)
          Length = 4855

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 3715 ggggcggccaagggcgccag 3696
to top
>emb|AJ487034.1|SEN487034 Salmonella enteritidis class 1 integron conatining aacA4 gene,
           aadA1 gene and catB2 gene
          Length = 2430

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 724 ggggcggccaagggcgccag 705
to top
>emb|AJ439689.1|PPU439689 Pseudomonas putida partial pVA304 plasmid containing class 1 integron
            In110
          Length = 2573

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1637 ggggcggccaagggcgccag 1618
to top
>gb|AY987853.1| Klebsiella pneumoniae plasmid pMVH202 class 1 integron In113 VIM-1
            metallo-beta-lactamase (blaVIM-1), aminoglycoside
            acetyltransferase (aacA4), dihydrofolate reductase
            (dfrII), aminoglycoside-3'-adenylyltransferase (aadA1),
            and chloramphenicol acetyltransferase (catB2) genes,
            complete cds
          Length = 3589

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1611 ggggcggccaagggcgccag 1592
to top
>gb|AY970968.1| Escherichia coli plasmid pMVH202 class 1 integron In113 VIM-1
            metallo-beta-lactamase (blaVIM-1), aminoglycoside
            acetyltransferase (aacA4), dihydrofolate reductase
            (dfrII), aminoglycoside-3'-adenylyltransferase (aadA1),
            and chloramphenicol acetyltransferase (catB2) genes,
            complete cds
          Length = 3589

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1611 ggggcggccaagggcgccag 1592
to top
>emb|AJ319747.1|ABA319747 Acinetobacter baumannii intI1 gene (partial), aacA4 gene, ORF,
           oxa-20 gene and qacEdelta1 gene (partial)
          Length = 2339

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 794 ggggcggccaagggcgccag 775
to top
>emb|AJ311891.2|SIN311891 Salmonella enterica subsp. enterica serovar Infantis plasmid pS21
            class I sulI-type integron (InS21)
          Length = 8861

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1711 ggggcggccaagggcgccag 1692
to top
>emb|AJ295229.1|PAE295229 Pseudomonas aeruginosa intI1 gene (partial), blaVIM-2 gene,
            aac(6')-Ib' gene, aadA1 gene, oxa2 gene and ORFD
          Length = 3783

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1693 ggggcggccaagggcgccag 1674
to top
>emb|AJ291609.1|PAE291609 Pseudomonas aeruginosa intI1 gene (partial), blaVIM-1 gene, aacA4
            gene, aph gene and aadA1 gene
          Length = 3464

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1698 ggggcggccaagggcgccag 1679
to top
>emb|AJ243491.1|ABA243491 Acinetobacter baumannii partial intI1 gene and blaIMP-2, aacA4 and
            aadA1 genes
          Length = 3027

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1980 ggggcggccaagggcgccag 1961
to top
>gb|AF445082.1| Acinetobacter baumannii integron class I integrase (intI),
            carbapenem-hydrolyzing beta-lactamase (blaIMP-4),
            quaternary ammonium compound resistance protein (qacG),
            aminoglycoside 6'-N-acetyltransferase (aacA4), and
            chloramphenicol acetyltransferase variant (catB3) genes,
            complete cds
          Length = 4171

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 3391 ggggcggccaagggcgccag 3372
to top
>emb|AJ223604.1|PAE223604 Pseudomonas aeruginosa integron In 101 DNA
          Length = 9581

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2973 ggggcggccaagggcgccag 2954
to top
>emb|AJ009820.2|STY9820 Salmonella typhimurium plasmid pSEM partial intI1 gene, aacC4 and
           aacC1 genes, ORF X and ORF X', aadA1a, qacEdelta1 and
           sul1 genes, ORF 5 and ORF 6 and partial tnpA gene
          Length = 6436

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 902 ggggcggccaagggcgccag 883
to top
>ref|NM_001029870.1| Homo sapiens similar to RIKEN cDNA 5730467H21 (LOC345079), mRNA
          Length = 2921

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   ttcctcgcactctctctttc 56
            ||||||||||||||||||||
Sbjct: 1068 ttcctcgcactctctctttc 1087
to top
>emb|AJ784805.1| Pseudomonas aeruginosa partial integron, isolate 86-10088
          Length = 3690

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1784 ggggcggccaagggcgccag 1765
to top
>emb|AJ784804.1| Pseudomonas aeruginosa partial integron, isolate 85-2394
          Length = 3690

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1784 ggggcggccaagggcgccag 1765
to top
>emb|AJ784256.1| Pseudomonas aeruginosa partial intI1 gene, blaVIM-1 gene, smr-2 gene,
            ORF1, aacA4 gene, pse-1 gene and partial qacEdelta1 gene
          Length = 4053

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2831 ggggcggccaagggcgccag 2812
to top
>gb|DQ112222.1| Achromobacter denitrificans isolate YMC/HMC 233516 class I integron,
            partial sequence
          Length = 8525

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 5344 ggggcggccaagggcgccag 5325



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 724 ggggcggccaagggcgccag 705
to top
>gb|AF369871.1| Acinetobacter genomosp. 3 class I integron DNA integrase IntI1
            (intI1) gene, partial cds; metallo-beta-lactamase VIM-2
            (blaVIM-2), aminoglycoside 6'-acetyltransferase type I
            (aacA6'-Ib), and aminoglycoside 3'-adenylyltransferase
            (aadA1) genes, complete cds; quaternary ammonium
            compound-resistance protein (qacEdelta1) gene, partial
            cds; and unknown genes
          Length = 4992

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2058 ggggcggccaagggcgccag 2039
to top
>gb|AF470625.1| Mus musculus LIM-protein (Hlp) gene, complete cds
          Length = 6224

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 gcgcgctgcaggcggggcgc 275
           ||||||||||||||||||||
Sbjct: 164 gcgcgctgcaggcggggcgc 145
to top
>dbj|BS000619.1| Pan troglodytes chromosome Y clone:PTB-493L21, complete sequences
          Length = 161970

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   gtcctgcacgctggccagga 132
             ||||||||||||||||||||
Sbjct: 36362 gtcctgcacgctggccagga 36381
to top
>dbj|BS000603.1| Pan troglodytes chromosome Y clone:PTB-616H14, complete sequences
          Length = 133913

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 113   gtcctgcacgctggccagga 132
             ||||||||||||||||||||
Sbjct: 10749 gtcctgcacgctggccagga 10768
to top
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 113      gtcctgcacgctggccagga 132
                ||||||||||||||||||||
Sbjct: 22543620 gtcctgcacgctggccagga 22543601
to top
>gb|AF418284.1| Pseudomonas aeruginosa isolate YMC 95012105 class I integron In107,
            partial sequence
          Length = 3818

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2771 ggggcggccaagggcgccag 2752
to top
>dbj|AB219236.1| Vibrio cholerae O1 aar-3, aacA4, dfrA1 genes, complete cds
          Length = 2483

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1327 ggggcggccaagggcgccag 1308
to top
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 143    ggccaagggcgccagggtggtgct 166
              ||||||||||||||| ||||||||
Sbjct: 358339 ggccaagggcgccagcgtggtgct 358362
to top
>gb|AC008012.8| Homo sapiens 12p13 BAC RPCI11-388F6 (Roswell Park Cancer Institute
             Human BAC Library) complete sequence
          Length = 170200

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 161   ggtgctccccgacggcgggatcag 184
             |||||||||||||||| |||||||
Sbjct: 59153 ggtgctccccgacggccggatcag 59176
to top
>gb|DQ393784.1| Pseudomonas aeruginosa strain N2-1 class I integron, partial sequence
          Length = 5144

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 4956 ggggcggccaagggcgccag 4937
to top
>gb|DQ393781.1| Pseudomonas aeruginosa strain N2-15 class I integron, partial
           sequence
          Length = 2962

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 874 ggggcggccaagggcgccag 855
to top
>gb|AF315351.1|AF315351 Pseudomonas aeruginosa integron integrase (int1) gene, partial cds;
            and beta-lactamase OXA-32 (bla oxa-32) and
            acetyltransferase (aacA4) genes, complete cds
          Length = 2193

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2154 ggggcggccaagggcgccag 2135
to top
>dbj|AK158081.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched
           library, clone:F930026P19 product:unclassifiable, full
           insert sequence
          Length = 3184

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 256 gcgcgctgcaggcggggcgc 275
           ||||||||||||||||||||
Sbjct: 676 gcgcgctgcaggcggggcgc 695
to top
>gb|BC102475.1| Bos taurus B-cell CLL/lymphoma 7B, mRNA (cDNA clone MGC:127448
           IMAGE:7950718), complete cds
          Length = 1621

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 aagggcgccagggtggtgct 166
           ||||||||||||||||||||
Sbjct: 643 aagggcgccagggtggtgct 624
to top
>gb|AF322577.2|AF322577 Klebsiella pneumoniae plasmid pEKP0787-1 integron In73 DNA integrase
            form delta 1 (intI1delta1), metallo-beta-lactamase IMP-8
            (blaIMP-8), aminoglycoside 6'-N-acetyltransferase
            (aac6'-Ib), chloramphenicol acetyltransferase (catB4),
            and ethidium bromide resistance protein qacE form delta1
            (qacEdelta1) genes, complete cds; and dihydropteroate
            synthase Sul1 (sul1) gene, partial cds
          Length = 4920

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 3523 ggggcggccaagggcgccag 3504
to top
>gb|AY912492.1| Escherichia coli class I integron chloramphenicol resistance protein
            cmlA1-variant-like gene, complete sequence, and
            aminoglycoside acetyltransferase AAC(6')-Ib (aacA4) gene,
            complete cds
          Length = 2360

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1618 ggggcggccaagggcgccag 1637
to top
>gb|S45954.1| aminoglycoside 6'-N-acetyltransferase [Salmonella typhimurium, S24,
            pST2, Plasmid, 1393 nt]
          Length = 1393

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1314 ggggcggccaagggcgccag 1295
to top
>gb|DQ321671.1| Shigella sonnei plasmid pSS2852 multidrug-resistance class 1
           integron, complete sequence
          Length = 2426

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 749 ggggcggccaagggcgccag 730
to top
>gb|DQ370505.1| Acinetobacter baumannii strain P17 class 1 integron
           6'-N-aminoglycoside acetyltransferase (aacA4),
           3-n-aminoglycoside acetyltransferase (aac(3)-Ia), and
           aminoglycoside adenyltransferase AAD(3') (aadA1a) genes,
           complete cds, and unknown genes
          Length = 3182

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 743 ggggcggccaagggcgccag 724
to top
>gb|AF199025.3| Sinorhizobium medicae two component sensor protein A (tcsA) gene,
            partial cds; and two component regulator protein A
            (tcrA), fused sensor regulator protein R (fsrR), low pH
            inducible protein A (lpiA), acid virulence protein B
            (acvB), and two component regulator protein B (tcrB)
            genes, complete cds
          Length = 8015

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 275  ccggatcgaggcgctcgcggctga 298
            |||| |||||||||||||||||||
Sbjct: 1661 ccggttcgaggcgctcgcggctga 1684
to top
>gb|AF355189.1| Pseudomonas aeruginosa integron In60 integrase IntI1 (intI1),
            aminoglycoside 3-N-acetyltransferase/aminoglycoside
            6'-N-acetyltransferase fusion protein
            (aac(3)-Ib/aac(6')-Ib), and beta-lactamase GES-1
            (blages-1) genes, complete cds
          Length = 3525

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2487 ggggcggccaagggcgccag 2468
to top
>gb|AF318077.1| Pseudomonas aeruginosa integron InAB1 aminoglycoside
            6'-N-acetyltransferase (aacC4), metallo-beta-lactamase
            (blaIMP-7), and aminoglycoside 3-N-acetyltransferase
            (aacC1) genes, complete cds
          Length = 2651

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1119 ggggcggccaagggcgccag 1100
to top
>gb|AF315786.1| Pseudomonas aeruginosa class I integron integrase (intI1) gene,
            partial cds; and aminoglycoside acetyltransferase
            (aac(6')-Ib) and restricted-spectrum beta-lactamase
            OXA-35 (bla) genes, complete cds
          Length = 2222

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1281 ggggcggccaagggcgccag 1262
to top
>gb|AY029772.1| Pseudomonas aeruginosa isolate YMC704 class I integron, partial
            sequence
          Length = 5623

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1323 ggggcggccaagggcgccag 1304
to top
>gb|AF282595.1| Klebsiella pneumoniae integron INTCZD37 DNA integrase gene, partial
           cds; 6'-N-aminoglycoside acetyltransferase (aac(6')-Ib),
           3-N-aminoglycoside acetyltransferase (aac(3)-Ia),
           aminoglycoside adenyltransferase AAD(3') (aadA1a), and
           quaternary ammonium compound-resistance protein
           (qacEdelta1) genes, complete cds; and unknown genes
          Length = 3753

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 872 ggggcggccaagggcgccag 853
to top
>gb|AF263520.1| Pseudomonas aeruginosa integron In58, partial sequence
          Length = 5648

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 3988 ggggcggccaagggcgccag 3969
to top
>gb|AF207065.1| Klebsiella pneumoniae DNA integrase (int) gene, partial cds;
           aminoglycoside 6'-N-acetyltransferase (aacC4) and
           aminoglycoside 3'-N-acetyltransferase (aac(3')-I) genes,
           complete cds; and ethidium bromide-resistance protein
           (qacdelta1) gene, partial cds
          Length = 1660

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 872 ggggcggccaagggcgccag 853
to top
>gb|AF202035.1| Enterobacter cloacae integron In14pr44/16 DNA integrase (int) gene,
           partial cds; aminoglycoside 6'-N-acetyltransferase
           (aacC4) gene, complete cds; and quaternary ammonium
           compound-resistance protein (qacEdelta1) gene, partial
           cds
          Length = 1082

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 872 ggggcggccaagggcgccag 853
to top
>gb|AF416297.1| Serratia marcescens class 3 integron, partial sequence
          Length = 3940

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 3352 ggggcggccaagggcgccag 3333
to top
>gb|AF227505.1| Klebsiella pneumoniae plasmid pY2 class 1 integron aminoglycoside
           6'-N-acetyltransferase (aac(6')-Ib), beta-lactamase
           (oxa-1), and streptomycin 3''-adenyltransferase (aadA2)
           genes, complete cds
          Length = 2785

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 898 ggggcggccaagggcgccag 879
to top
>gb|AY065966.1| Pseudomonas putida class I integron DNA integrase (intI1) gene,
            partial cds; aminoglycoside acetyltransferase (aacA6'-Ib)
            and metallo-beta-lactamase (blaVIM-2) genes, complete
            cds; and unknown genes
          Length = 4495

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1192 ggggcggccaagggcgccag 1173
to top
>gb|AY878717.1| Escherichia coli plasmid pKO97, partial sequence
          Length = 9634

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1182 ggggcggccaagggcgccag 1163
to top
>gb|AF231133.1|AF231133 Pseudomonas aeruginosa INTI1 (intI1) gene, partial cds; and
            AAC(6')-Ib (aac(6')-Ib) and OXA-28 (oxa-28) genes,
            complete cds
          Length = 2254

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1313 ggggcggccaagggcgccag 1294
to top
>gb|AC104687.3| Homo sapiens BAC clone RP11-123J14 from 4, complete sequence
          Length = 176662

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    ttcctcgcactctctctttc 56
             ||||||||||||||||||||
Sbjct: 48540 ttcctcgcactctctctttc 48521
to top
>gb|AY260546.3| Escherichia coli plasmid pAK33 insertion sequence IS26 transposase
            (tnpA) gene, complete cds; AphA1-IAB (aphA7) gene,
            complete cds; insertion sequence IS26 transposase (tnpA)
            gene, complete cds; transposon class 1 integron In111,
            complete sequence; and insertion sequence IS6100
            transposase (tnpA) gene, complete cds
          Length = 10538

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 4422 ggggcggccaagggcgccag 4403
to top
>gb|AY038837.2| Acinetobacter baumannii type 1 integron IntI gene, partial cds;
            rifampin ADP-ribosylating transferase (arr-3),
            aminoglycoside 6'-N-acetyltransferase (aacA4), quaternary
            ammonium-compound resistance protein (qacEdelta1), and
            diphydropterorate synthase (sul1) genes, complete cds;
            and unknown gene
          Length = 3604

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1748 ggggcggccaagggcgccag 1729
to top
>gb|AF317511.1| Pseudomonas aeruginosa integron In80 class 1 DNA integrase (intI1)
            gene, partial cds; and metallo-beta-lactamase (blaVIM-1),
            aminoglycoside 6'-N-acetyltransferase type II enzyme
            (aac6'-Ib'), aminoglycoside 6'-N-acetyltransferase type
            II enzyme (aac6'-Ib'), and OXA-like protein (blaOXA)
            genes, complete cds
          Length = 3237

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2337 ggggcggccaagggcgccag 2318



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1698 ggggcggccaagggcgccag 1679
to top
>gb|AY136758.1| Salmonella typhimurium plasmid pSTI1 class I integron integrase
           (intI1) gene, partial cds; aminoglycoside
           6-N-acetyltransferase type Ib11 (aac(6')-Ib) gene,
           complete cds; and unknown gene
          Length = 1366

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 995 ggggcggccaagggcgccag 976
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 256     gcgcgctgcaggcggggcgc 275
               ||||||||||||||||||||
Sbjct: 3553524 gcgcgctgcaggcggggcgc 3553543



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 241     tcctgaccgacgcgcgcgcgctgc 264
               ||||||||||||||| ||||||||
Sbjct: 1321789 tcctgaccgacgcgctcgcgctgc 1321812
to top
>gb|AF024602.1|AF024602 Pseudomonas aeruginosa integrase (tnpI) gene, partial cds; AacA4
            protein (aacA4), beta-lactamase (oxa-20), genes, complete
            cds; resolvase (tnpR) pseudogene, partial sequence;
            streptomycin resistance protein A (strA), and
            streptomycin resistance protein B (strB) genes, complete
            cds
          Length = 3997

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1204 ggggcggccaagggcgccag 1185
to top
>gb|AF043381.1|AF043381 Pseudomonas aeruginosa integrase (intI) gene, partial cds;
           aminoglycoside 6'-N-acetyltransferase (aac(6')-Ib9) and
           beta-lactamase (bla oxa-19) genes, complete cds; and
           qacEdelta1 gene, partial cds
          Length = 1976

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 911 ggggcggccaagggcgccag 892
to top
>gb|AF156486.1|AF156486 Klebsiella pneumoniae integron integrase INTI1 (intI1),
            beta-lactamase GES-1 (ges-1), aminoglycoside
            6'-N-acetyltransferase type II AAC6'Ib (aac(6')-Ib'),
            dihydrofolate reductase DHFRXVb (dhfrXVb),
            chloramphenicol transporter CMLA4 (cmlA4), and
            streptomycin 3''-adenylyltransferase AADA2 (aadA2) genes,
            complete cds
          Length = 5863

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2844 ggggcggccaagggcgccag 2825
to top
>dbj|AB188812.1| Pseudomonas aeruginosa class 1 integron intI1, blaIMP-6, aacA4,
            aadA1, blaOXA-2 genes for DNA integrase,
            metallo-beta-lactamase IMP-6, aminoglycoside modifying
            enzyme, aminoglycoside modifying enzyme, beta-lactamase
            OXA-2, partial and complete cds
          Length = 3911

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2070 ggggcggccaagggcgccag 2051
to top
>gb|AY954726.1| Pseudomonas aeruginosa transposon class 1 integron IN103 integrase
            (intI1) gene, partial cds, and 6'-N-aminoglycoside
            acetyltransferase Il (aacA7), VIM-2
            metallo-beta-lactamase (blaVIM-2), and
            6'-N-aminoglycoside acetyltransferase Ib' (aacA4) genes,
            complete cds
          Length = 2620

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2592 ggggcggccaagggcgccag 2573
to top
>emb|AJ507182.1|HEC507182 Hepatitis C virus partial gene for polyprotein, genomic RNA, isolate
            NR6
          Length = 1341

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 191  caggcccccgacgacggcgg 210
            ||||||||||||||||||||
Sbjct: 1195 caggcccccgacgacggcgg 1214
to top
>emb|X68227.1|ECPSAAAD E.coli plasmid pSa aadA2 gene for streptomycin resistance
          Length = 1198

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 132 ggggcggccaagggcgccag 113
to top
>gb|AF188155.1|AF188155 Oxytricha nova clone 55 unknown protein gene, complete cds
          Length = 1424

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 51   tctttcttttatccccttta 70
            ||||||||||||||||||||
Sbjct: 1207 tctttcttttatccccttta 1188
to top
>gb|AY907717.1| Pseudomonas putida isolate YMC 98/2/665 class I integron DNA
            integrase (intI1) gene, partial cds, aminoglycoside
            6'-acetyltransferase type I (aacA6'-I),
            metallo-beta-lactamase VIM-2 (blaVIM-2), aminoglycoside
            6'-acetyltransferase type Ib (aacA6'-Ib), oxacillinase
            (blaOXA-2), and quaternary ammonium compound-resistance
            protein (qac) genes, complete cds, quaternary ammonium
            compound-resistance protein (qacEdelta1) gene, partial
            cds, and unknown genes
          Length = 5325

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2960 ggggcggccaagggcgccag 2941



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1100 ggggcggccaagggcgccag 1081
to top
>gb|U90945.1|KOU90945 Klebsiella oxytoca plasmid pACM1 quaternary ammonium compound
            transporter protein (qacE delta 1) gene, partial cds;
            3''-0-adenyltransferase (ant(3'')-Ia), 3-N-aminoglycoside
            acetyltransferase (aac(3)-Ia), and 6'-N-aminoglycoside
            acetyltransferase (aac(6')-Ib) genes, complete cds; DNA
            integrase (intI1) gene, partial cds; and unknown genes
          Length = 4196

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2581 ggggcggccaagggcgccag 2600
to top
>emb|AJ697861.1| Gram-negative bacterium TR-59 aac6'-Ib gene for aminoglycoside
           6-N-acetyltransferase
          Length = 811

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 773 ggggcggccaagggcgccag 754
to top
>emb|AJ313334.1|ABA313334 Acinetobacter baumannii partial intI1 gene for class I integron DNA
           integrase and aacA4 gene for aminoglycoside
           6'-N-acetyltransferase
          Length = 939

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 818 ggggcggccaagggcgccag 799
to top
>gb|AY887109.1| Providencia rettgeri class 1 integron, complete sequence
          Length = 3762

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 837 ggggcggccaagggcgccag 818
to top
>emb|CT571273.12| Mouse DNA sequence from clone RP23-48L21 on chromosome 16, complete
             sequence
          Length = 142519

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    cctcgcactctctctttcttttat 62
             |||| |||||||||||||||||||
Sbjct: 33931 cctctcactctctctttcttttat 33954
to top
>emb|AM087410.1| Pseudomonas aeruginosa class 1 integron containing blaVIM-4 and aacA4
            gene cassettes
          Length = 1671

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1638 ggggcggccaagggcgccag 1619
to top
>emb|AM087408.1| Pseudomonas aeruginosa class 1 integron containing blaVIM-2 and aacA4
            gene cassettes
          Length = 1623

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1580 ggggcggccaagggcgccag 1561
to top
>emb|AM087404.1| Pseudomonas aeruginosa class 1 integron containing aacA4 and
           blaVIM-2 gene cassettes
          Length = 1630

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 724 ggggcggccaagggcgccag 705
to top
>emb|AM183120.1| Enterobacter cloacae partial integron In71
          Length = 3446

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2057 ggggcggccaagggcgccag 2038
to top
>gb|U59183.1|PAU59183 Pseudomonas aeruginosa integrase (int) gene, partial cds; and
           aminoglycoside 6'-N-acetyltransferase (aac(6')-Ib) and
           beta-lactamase (bla oxa-13) genes, complete cds
          Length = 1972

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 907 ggggcggccaagggcgccag 888
to top
>emb|AJ971343.1| Klebsiella pneumoniae partial pRBDHA plasmid
          Length = 25625

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1023 ggggcggccaagggcgccag 1004
to top
>emb|AM040709.1| Escherichia coli intI1 gene (partial), aac(6')1b gene, blaOXA-2
           gene, ORFD, qacEdelta1 gene, sul1 gene, ORF513,
           blaCTX-M-2 gene, ORF3 (partial), qacEdelta1 gene and
           sul1 gene (partial)
          Length = 8499

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 805 ggggcggccaagggcgccag 786
to top
>gb|AY686225.1| Achromobacter xylosoxidans class I integron DNA integrase (intI1)
            gene, partial cds, aminoglycoside 6'-acetyltransferase
            type I (aacA6'-Ib), aminoglycoside 6'-acetyltransferase
            type I (aacA6'-Ib), metallo-beta-lactamase VIM-2
            (blaVIM-2), and aminoglycoside 6'-acetyltransferase type
            I (aacA6'-Ib) genes, complete cds, and quaternary
            ammonium compound-resistance protein (qacEdelta) gene,
            partial cds
          Length = 3436

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 3341 ggggcggccaagggcgccag 3322



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1793 ggggcggccaagggcgccag 1774



 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1154 ggggcggccaagggcgccag 1135
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>gb|DQ287356.1| Pseudomonas aeruginosa class I integron metallo-beta-lactamase VIM-2
            (blaVIM-2), quaternary ammonium compound-resistance
            protein (qac), aminoglycoside (6') N-acetyltransferase
            (aacA4), chloramphenicol acetyltransferase (catB3),
            oxacillinase (blaOXA-30), and 3'-aminoglycoside
            adenyltransferase (aadA1) genes, complete cds
          Length = 4954

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 2220 ggggcggccaagggcgccag 2201
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>gb|AY866525.1| Pseudomonas aeruginosa class I integron integrase I (intI) gene,
            partial cds, metallo-beta-lactamase VIM-4 (blaVIM-4),
            6'-N-aminoglycoside acetyltransferase (aacA4), and
            beta-lactamase OXA-35 (blaOXA-35) genes, complete cds,
            and QacEdelta1 (qacEdelta1) gene, partial cds
          Length = 3459

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 1898 ggggcggccaagggcgccag 1879
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>ref|NM_001034775.1| Bos taurus B-cell CLL/lymphoma 7B (BCL7B), mRNA
          Length = 1621

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 aagggcgccagggtggtgct 166
           ||||||||||||||||||||
Sbjct: 643 aagggcgccagggtggtgct 624
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>gb|AC161112.5| Mus musculus BAC clone RP24-468O24 from chromosome 12, complete sequence
          Length = 217434

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 256    gcgcgctgcaggcggggcgc 275
              ||||||||||||||||||||
Sbjct: 110262 gcgcgctgcaggcggggcgc 110243
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>gb|M11444.1|PLPPSASPR Plasmid pSa DNA region containing the Sp-R gene of pSa
          Length = 1447

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 138 ggggcggccaagggcgccag 157
           ||||||||||||||||||||
Sbjct: 375 ggggcggccaagggcgccag 356
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>dbj|AB070224.1| Serratia marcescens tniC, intI3, blaIMP, aac6'-Ib, parA, blaTEM
            genes, partial and complete cds
          Length = 7534

 Score = 40.1 bits (20), Expect = 4.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 138  ggggcggccaagggcgccag 157
            ||||||||||||||||||||
Sbjct: 3031 ggggcggccaagggcgccag 3012


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,972,639
Number of Sequences: 3902068
Number of extensions: 2972639
Number of successful extensions: 104039
Number of sequences better than 10.0: 168
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102395
Number of HSP's gapped (non-prelim): 1644
length of query: 322
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 300
effective length of database: 17,147,199,772
effective search space: 5144159931600
effective search space used: 5144159931600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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