ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet101g04 |
|---|---|
| Clone Library Name | barley_pub |
>DBP7_GIBZE (Q4HZ68) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)| Length = 744 Score = 78.6 bits (192), Expect = 6e-15 Identities = 45/125 (36%), Positives = 72/125 (57%), Gaps = 1/125 (0%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIP-VISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRARE 217 +D L K GL PT +Q+ IP +++ DA +Q+ TGSGKTLAYLLPIL + L + Sbjct: 162 VDELGKMGLERPTGIQNKVIPHMLTSSSDAFVQAETGSGKTLAYLLPILHRV-LLLSVKG 220 Query: 218 QGNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKN 397 + SG A++VAP+REL Q+ +EK++ P + + GG ++ ++ ++K Sbjct: 221 GAQIHRDSGAFAIIVAPTRELAKQVHTVLEKLIRPFPWLVSTAITGGESKKAEKARIRKG 280 Query: 398 KPIIV 412 +V Sbjct: 281 VNFLV 285
>DBP7_EMENI (Q5BGX6) ATP-dependent RNA helicase dbp7 (EC 3.6.1.-)| Length = 778 Score = 78.2 bits (191), Expect = 7e-15 Identities = 48/128 (37%), Positives = 77/128 (60%), Gaps = 7/128 (5%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIP-VISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGN 226 L K L +PT +Q ASI ++ + DA IQ+ TGSGKTLAYLLP++ I L RA+ +G+ Sbjct: 167 LTKLELKAPTAIQKASITQLLKEETDAFIQAETGSGKTLAYLLPLVQRIMALSRAKNEGD 226 Query: 227 SE------KRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEAL 388 ++ + SG+ A+++AP+REL QI +E +L + ++GG + ++ L Sbjct: 227 AKGDTSVHRDSGLFAIILAPTRELCKQISVVLEGLLRCAHWIVAGTVIGGEKKKSEKARL 286 Query: 389 KKNKPIIV 412 +K I+V Sbjct: 287 RKGLNILV 294
>PRP28_ASPOR (Q2UH00) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 803 Score = 75.1 bits (183), Expect = 6e-14 Identities = 46/124 (37%), Positives = 69/124 (55%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ +NK G PT +Q A+IP+ Q D + + TGSGKT ++LLP+L I L R ++ Sbjct: 379 MELVNKVGYKEPTPIQRAAIPIAMQSRDLIGVAVTGSGKTASFLLPLLVYIAELPRI-DE 437 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 K G A+V+AP+REL QI E +K P +V +VGG + Q +L+ Sbjct: 438 FEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTEPLGFNVV-SIVGGHSFEEQAYSLRNGA 496 Query: 401 PIIV 412 II+ Sbjct: 497 EIII 500
>YQFR_BACSU (P54475) Probable ATP-dependent RNA helicase yqfR (EC 3.6.1.-)| Length = 438 Score = 75.1 bits (183), Expect = 6e-14 Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 2/129 (1%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ID +++ G PT++Q IP + ++ + QS TG+GKT AYLLP+L++I P K Sbjct: 16 IDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLNKIDPAKDV--- 72 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQ--LVGGANRSRQEEALKK 394 ++ V+ AP+REL QI +E KI ++ ++ +GG ++ + + L K Sbjct: 73 --------VQVVITAPTRELANQIYQEALKITQGEEGSQIRSKCFIGGTDKQKSIDKL-K 123 Query: 395 NKPIIVVGT 421 +P +VVGT Sbjct: 124 IQPHLVVGT 132
>DDX31_HUMAN (Q9H8H2) Probable ATP-dependent RNA helicase DDX31 (EC 3.6.1.-)| (DEAD box protein 31) (Helicain) Length = 851 Score = 73.2 bits (178), Expect = 2e-13 Identities = 40/116 (34%), Positives = 68/116 (58%) Frame = +2 Query: 65 LTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSG 244 ++S T VQ SIPV+ + DA+++S TGSGKTLAY +P++ + + + ++ G Sbjct: 251 MSSMTSVQKQSIPVLLEGRDALVRSQTGSGKTLAYCIPVVQSLQAM-----ESKIQRSDG 305 Query: 245 IEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 A+V+ P+REL +Q V+K+L P + L+GG R ++ L+K I++ Sbjct: 306 PYALVLVPTRELALQSFDTVQKLLKPFTWIVPGVLMGGEKRKSEKARLRKGINILI 361
>DBP7_ASPFU (Q4WV71) ATP-dependent RNA helicase dbp7 (EC 3.6.1.-)| Length = 758 Score = 72.0 bits (175), Expect = 5e-13 Identities = 47/128 (36%), Positives = 73/128 (57%), Gaps = 7/128 (5%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIP-VISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGN 226 L K L +PT +Q ASI ++ + DA IQ+ TGSGKTLAYLLP++ I L + Q + Sbjct: 154 LTKLELKAPTAIQKASISQLLKEEGDAFIQAETGSGKTLAYLLPLVQRIMALSKPGAQTD 213 Query: 227 S------EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEAL 388 + + SG+ A+V+AP+REL QI +E +L + ++GG + ++ L Sbjct: 214 ATGQPIVHRDSGLFAIVLAPTRELCKQISVVLENLLRCAHWIVAGTVIGGEKKKSEKARL 273 Query: 389 KKNKPIIV 412 +K I+V Sbjct: 274 RKGLNILV 281
>SPB4_CANGA (Q6FKS8) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 617 Score = 71.6 bits (174), Expect = 7e-13 Identities = 47/131 (35%), Positives = 77/131 (58%), Gaps = 7/131 (5%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 +N G S T VQ+++IP+ ++ D V++S TGSGKT+A+++PIL +I + NS Sbjct: 22 INVSGFDSMTPVQASTIPMFAKNKDVVVESVTGSGKTIAFVIPILEKI----ISEGINNS 77 Query: 230 E-KRSGIEAVVVAPSRELGMQIVREVEKILG--PDDKRLVQ-QLVGGANRSRQEE---AL 388 + K+ ++++AP+REL MQI V L P+D+ ++ QLV G N + L Sbjct: 78 KFKKGHFYSLILAPTRELSMQIQNVVSSFLEHYPEDQYPIRSQLVVGTNEKSVRDDVNTL 137 Query: 389 KKNKPIIVVGT 421 +P I++GT Sbjct: 138 LDERPQILIGT 148
>VASA_DROME (P09052) ATP-dependent RNA helicase vasa (EC 3.6.1.-) (Antigen| Mab46F11) Length = 661 Score = 71.6 bits (174), Expect = 7e-13 Identities = 44/124 (35%), Positives = 65/124 (52%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ID +NK G PT +Q SIPVIS D + + TGSGKT A+LLPILS++ E Sbjct: 257 IDNVNKSGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKLLEDPHELEL 316 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 G + V+V+P+REL +QI E K + + + GG + Q E + + Sbjct: 317 GRP------QVVIVSPTRELAIQIFNEARK-FAFESYLKIGIVYGGTSFRHQNECITRGC 369 Query: 401 PIIV 412 +++ Sbjct: 370 HVVI 373
>SPB4_KLULA (Q6CN92) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 596 Score = 71.2 bits (173), Expect = 9e-13 Identities = 46/128 (35%), Positives = 78/128 (60%), Gaps = 8/128 (6%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSE--K 235 G + T VQ+++IP+ S D V++S TGSGKT+A+++PIL + +E+ NS K Sbjct: 26 GFETMTPVQASTIPLFSGNKDVVVESVTGSGKTIAFVIPILERL-----IKEEANSAKFK 80 Query: 236 RSGIEAVVVAPSRELGMQIVREVEKILG--PDDKRLV--QQLVGGANRSRQEE--ALKKN 397 +S +++++P+REL QI +E L PD+ + Q LVG ++ S +++ + N Sbjct: 81 KSHFHSLIISPTRELASQIHDVIEDFLKYYPDNLYPIRSQLLVGTSSASVRDDINSFTDN 140 Query: 398 KPIIVVGT 421 +P I+VGT Sbjct: 141 RPQILVGT 148
>PRP28_ASPFU (Q4WPE9) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 796 Score = 71.2 bits (173), Expect = 9e-13 Identities = 44/124 (35%), Positives = 68/124 (54%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ +++ G PT +Q A+IP+ Q D + + TGSGKT ++LLP+L I L R ++ Sbjct: 376 LELVDQVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYISELPRI-DE 434 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 K G A+V+AP+REL QI E K P +V +VGG + Q +L+ Sbjct: 435 FEWRKNDGPYAIVLAPTRELAQQIEIEARKFTQPLGFNVV-SIVGGHSFEEQAYSLRNGA 493 Query: 401 PIIV 412 II+ Sbjct: 494 EIII 497
>PRP28_NEUCR (Q7SEL0) Pre-mRNA splicing ATP-dependent RNA helicase prp-28 (EC| 3.6.1.-) Length = 728 Score = 71.2 bits (173), Expect = 9e-13 Identities = 47/124 (37%), Positives = 65/124 (52%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 +D + G PT +Q A+IP+ Q D + + TGSGKT A+LLP+L I L E Sbjct: 305 LDIVKNVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISELPPLTEY 364 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 K G A+++AP+REL QI E +K P +V +VGG + Q AL+ Sbjct: 365 ---NKNDGPYALILAPTRELVQQIESEAKKFATPLGFTVV-SIVGGHSLEEQAFALRNGA 420 Query: 401 PIIV 412 IIV Sbjct: 421 EIIV 424
>DBP7_NEUCR (Q7S873) ATP-dependent RNA helicase dbp-7 (EC 3.6.1.-)| Length = 814 Score = 70.5 bits (171), Expect = 2e-12 Identities = 42/122 (34%), Positives = 72/122 (59%), Gaps = 6/122 (4%) Frame = +2 Query: 65 LTSPTEVQSASIP-VISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSE--- 232 + +PT +Q +IP ++ + DA +Q+ TGSGKTLAYLLPI+ I L E G + Sbjct: 166 MKAPTAIQKNTIPQLVKEDSDAFLQAETGSGKTLAYLLPIVHRILALSH-NEDGTPKTTK 224 Query: 233 --KRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPI 406 + SG+ A+++AP+REL QI +EK+L + ++GG ++ ++ ++K I Sbjct: 225 VHRNSGLFAIILAPTRELCKQIAVVLEKVLRCAPWLVCTTVIGGESKKSEKARIRKGVNI 284 Query: 407 IV 412 ++ Sbjct: 285 LI 286
>DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (Helicase of 117.4 kDa) Length = 1032 Score = 70.1 bits (170), Expect = 2e-12 Identities = 45/124 (36%), Positives = 67/124 (54%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ L K G PT +Q+ +IP I D + + TGSGKT+A+LLP+ I +Q Sbjct: 384 LNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHI------MDQ 437 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + E+ G AV++ P+REL +QI +E +K R+V + GG S Q LK+ Sbjct: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVV-CVYGGTGISEQIAELKRGA 496 Query: 401 PIIV 412 IIV Sbjct: 497 EIIV 500
>DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 70.1 bits (170), Expect = 2e-12 Identities = 45/124 (36%), Positives = 67/124 (54%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ L K G PT +Q+ +IP I D + + TGSGKT+A+LLP+ I +Q Sbjct: 384 LNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHI------MDQ 437 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + E+ G AV++ P+REL +QI +E +K R+V + GG S Q LK+ Sbjct: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVV-CVYGGTGISEQIAELKRGA 496 Query: 401 PIIV 412 IIV Sbjct: 497 EIIV 500
>DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 70.1 bits (170), Expect = 2e-12 Identities = 45/124 (36%), Positives = 67/124 (54%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ L K G PT +Q+ +IP I D + + TGSGKT+A+LLP+ I +Q Sbjct: 384 LNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHI------MDQ 437 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + E+ G AV++ P+REL +QI +E +K R+V + GG S Q LK+ Sbjct: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVV-CVYGGTGISEQIAELKRGA 496 Query: 401 PIIV 412 IIV Sbjct: 497 EIIV 500
>DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (PRP5 homolog) Length = 1032 Score = 70.1 bits (170), Expect = 2e-12 Identities = 45/124 (36%), Positives = 67/124 (54%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ L K G PT +Q+ +IP I D + + TGSGKT+A+LLP+ I +Q Sbjct: 384 LNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHI------MDQ 437 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + E+ G AV++ P+REL +QI +E +K R+V + GG S Q LK+ Sbjct: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVV-CVYGGTGISEQIAELKRGA 496 Query: 401 PIIV 412 IIV Sbjct: 497 EIIV 500
>MAK5_ASPFU (Q4WMS3) ATP-dependent RNA helicase mak5 (EC 3.6.1.-)| Length = 777 Score = 69.7 bits (169), Expect = 3e-12 Identities = 47/130 (36%), Positives = 74/130 (56%), Gaps = 6/130 (4%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKR----ARE 217 L+K SPT VQ A IP I + HD + ++ TGSGKTLA+ +PIL KR A++ Sbjct: 216 LSKMKFGSPTSVQEACIPQILEGHDVIGKASTGSGKTLAFGIPILEHYLEKKRDDISAQK 275 Query: 218 QGNSEKRSGIEAVVVAPSRELGMQIVREVEKIL--GPDDKRLVQQLVGGANRSRQEEALK 391 + SEK S A++++P+REL Q+ + + +++ P + L GG + +Q+ L Sbjct: 276 EQMSEKDSTPIALILSPTRELAHQLSKHIGELIAQAPGVNARIALLTGGLSVQKQQRLL- 334 Query: 392 KNKPIIVVGT 421 + IV+GT Sbjct: 335 -SGADIVIGT 343
>DBP9_CANGA (Q6FUA6) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 595 Score = 69.7 bits (169), Expect = 3e-12 Identities = 43/129 (33%), Positives = 72/129 (55%), Gaps = 2/129 (1%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPV-ISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRARE 217 + + G T PT +QS +IP+ + ++ D + ++ TGSGKTLAYL+P++ I K++R Sbjct: 26 LQAIKGSGFTHPTLIQSHAIPLALEEKRDIIAKAATGSGKTLAYLIPVIQTILDYKKSRT 85 Query: 218 QGNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRL-VQQLVGGANRSRQEEALKK 394 G+ G +++ P+REL Q+ +EK++ K + V L + S L + Sbjct: 86 NGD---EPGTLGIIMVPTRELTQQVTAVLEKLIHYCSKDIKVLNLAADLSTSVLNTLLSE 142 Query: 395 NKPIIVVGT 421 N P I+VGT Sbjct: 143 N-PEIIVGT 150
>DBP10_DEBHA (Q6BL34) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 932 Score = 69.7 bits (169), Expect = 3e-12 Identities = 38/124 (30%), Positives = 68/124 (54%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 + ++K+G PT +Q +IP+I + D V + TGSGKT A+ LP++ ++ Sbjct: 109 LTNISKKGFKQPTPIQRKTIPLIMENRDVVGMARTGSGKTAAFTLPLVEKL--------- 159 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + R G+ A++++PSREL Q ++V++ D R + L+GG + Q ++ N Sbjct: 160 KSHSPRVGVRAIILSPSRELASQTFKQVKEFSKGTDLRSI-VLIGGDSLEEQFSSMMTNP 218 Query: 401 PIIV 412 +IV Sbjct: 219 DVIV 222
>DBP7_ASPOR (Q2UE66) ATP-dependent RNA helicase dbp7 (EC 3.6.1.-)| Length = 760 Score = 69.3 bits (168), Expect = 3e-12 Identities = 45/129 (34%), Positives = 71/129 (55%), Gaps = 8/129 (6%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIP-VISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGN 226 L K L +PT +Q AS+ ++ + DA IQ+ TGSGKTLAYLLP++ I + + Sbjct: 153 LTKLELKAPTGIQKASMSQLLKEDSDAFIQAETGSGKTLAYLLPLVQRIMTVSNPKNMST 212 Query: 227 SEK-------RSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEA 385 + K SG+ A+V+AP+REL QI +E +L + ++GG + ++ Sbjct: 213 NSKGEPIVHRDSGLFAIVLAPTRELCKQISVVLESLLRCAHWIVAGTVIGGEKKKSEKAR 272 Query: 386 LKKNKPIIV 412 L+K I+V Sbjct: 273 LRKGLNILV 281
>PRP28_YARLI (Q6C024) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 575 Score = 68.9 bits (167), Expect = 4e-12 Identities = 42/123 (34%), Positives = 70/123 (56%) Frame = +2 Query: 44 DRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQG 223 D +++ G PT +Q A+IP+ D + + TGSGKT ++L+P++S I L + E+ Sbjct: 176 DTISRMGYKEPTPIQRAAIPIALGIRDVIGVAETGSGKTASFLIPLISYICELPKLDER- 234 Query: 224 NSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKP 403 K +G +++AP+REL MQI E K P ++V +VGG + Q A+++ Sbjct: 235 --SKVNGPYGLILAPTRELAMQIKDEAVKFCAPLGFKVV-SVVGGYSAQEQALAVQEGAE 291 Query: 404 IIV 412 +IV Sbjct: 292 LIV 294
>PRP28_GIBZE (Q4I7F9) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 721 Score = 68.9 bits (167), Expect = 4e-12 Identities = 45/117 (38%), Positives = 61/117 (52%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G P+ +Q A+IP+ Q D + + TGSGKT A+LLP+L I L E K Sbjct: 307 GYKDPSPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISDLPPLDE---INKHD 363 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 G A+++AP+REL QI E K GP R+V +VGG Q L+ I+V Sbjct: 364 GPYALIMAPTRELVQQIETEARKFAGPLGFRVV-SIVGGHQIEEQAYNLRDGAEIVV 419
>DBP7_SCHPO (O60173) ATP-dependent RNA helicase dbp7 (EC 3.6.1.-)| Length = 709 Score = 68.9 bits (167), Expect = 4e-12 Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 3/126 (2%) Frame = +2 Query: 53 NKEGLTSPTEVQSASIPVI--SQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGN 226 NK +++PT +QS +P + + DA I++ TGSGKTLAYLLPI+ + L + Sbjct: 155 NKMNISAPTAIQSCCLPALLNTDDKDAFIEAQTGSGKTLAYLLPIVQRLIRLPK----NL 210 Query: 227 SEKRSGIEAVVVAPSRELGMQIVREVEKI-LGPDDKRLVQQLVGGANRSRQEEALKKNKP 403 + SGI AV++AP+REL QI K+ P +V V G + + E+A + Sbjct: 211 HTRTSGIYAVIMAPTRELCQQIYNVANKLNNNPLSHWIVSCNVIGGEKKKSEKARIRKGV 270 Query: 404 IIVVGT 421 I++GT Sbjct: 271 NILIGT 276
>MAK5_ASPOR (Q2UMY7) ATP-dependent RNA helicase mak5 (EC 3.6.1.-)| Length = 757 Score = 67.8 bits (164), Expect = 1e-11 Identities = 44/127 (34%), Positives = 70/127 (55%), Gaps = 3/127 (2%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 ++K T+PT VQ A IP I D + ++ TGSGKTLA+ +PIL R++ Q +S Sbjct: 199 ISKMKFTTPTSVQKACIPPILDGRDVIGKASTGSGKTLAFGIPILEYYLEKLRSKTQKDS 258 Query: 230 EKRSGIE-AVVVAPSRELGMQIVREVEKIL--GPDDKRLVQQLVGGANRSRQEEALKKNK 400 EK A+V++P+REL Q+ + + +++ P + L GG + +Q+ L Sbjct: 259 EKTETTPIALVLSPTRELAHQLAKHIGEVVSHAPGVNARIALLTGGLSLQKQQRVL--TN 316 Query: 401 PIIVVGT 421 IV+GT Sbjct: 317 ADIVIGT 323
>PRP5_CRYNE (Q5KME7) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1072 Score = 67.8 bits (164), Expect = 1e-11 Identities = 42/124 (33%), Positives = 68/124 (54%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 +D + +G +PT +Q+ +IP I D + + TGSGKT+A+LLP+ L+ R+Q Sbjct: 415 LDVIKHQGWETPTSIQAQAIPAIMSGRDVIGIAKTGSGKTVAFLLPM------LRHVRDQ 468 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 G AVV++P+REL QI +E + L + R VGG++ S A+KK Sbjct: 469 RPVSGSEGPIAVVMSPTRELASQIYKECQPFLKVLNIR-ASCCVGGSSISEDIAAMKKGA 527 Query: 401 PIIV 412 +++ Sbjct: 528 EVVI 531
>SPB4_ASHGO (Q750F8) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 599 Score = 67.8 bits (164), Expect = 1e-11 Identities = 42/128 (32%), Positives = 76/128 (59%), Gaps = 8/128 (6%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSE--K 235 G + T VQ+++IP+ ++ D V++S TGSGKT+A+++P+L + ++ NS K Sbjct: 26 GYETMTPVQASTIPLFARNKDVVVESVTGSGKTVAFVIPVLERV-----IQDDANSSKLK 80 Query: 236 RSGIEAVVVAPSRELGMQIVREVEKILG--PDDKRLVQ-QLVGGANRSRQEE---ALKKN 397 + ++++P+REL QI +E L PD + ++ QL+ G+N S + A ++ Sbjct: 81 KGHFHTIIISPTRELASQIQGVIEAFLTYYPDGEYPIKSQLLIGSNTSSVRDDVAAFLEH 140 Query: 398 KPIIVVGT 421 +P I+VGT Sbjct: 141 RPQILVGT 148
>SPB4_DEBHA (Q6BSM3) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 614 Score = 67.8 bits (164), Expect = 1e-11 Identities = 43/129 (33%), Positives = 77/129 (59%), Gaps = 9/129 (6%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEI-GPLKRAREQGNSE-- 232 G + T VQ+++IP+ S D V+++ TGSGKTLA+++P+L ++ L E+G + Sbjct: 29 GYPTMTPVQASTIPLFSGNKDVVVEAVTGSGKTLAFVIPVLQKLSNRLYNIDEEGENPEP 88 Query: 233 -KRSGIEAVVVAPSRELGMQIVREVEKILG--PDDKRLV--QQLVGGANRSRQE-EALKK 394 K+ + +++++P+REL QI +K+L P+DK + Q LVG + R++ + Sbjct: 89 VKKGHMLSIILSPTRELAKQIQTVFDKVLEYIPEDKATIKTQLLVGSLSSVREDIDYFLT 148 Query: 395 NKPIIVVGT 421 NK I++ T Sbjct: 149 NKTHILIAT 157
>DED1_CANGA (Q8TFK8) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 617 Score = 67.4 bits (163), Expect = 1e-11 Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 4/94 (4%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSE---IGPLKRA 211 ++ + T PT VQ S+P++S+ D + + TGSGKT +L P+LSE GP ++A Sbjct: 157 LENIKLARFTKPTPVQKYSVPIVSKGRDLMACAQTGSGKTGGFLFPVLSESFLTGPAEKA 216 Query: 212 REQGNSEKRSGI-EAVVVAPSRELGMQIVREVEK 310 G S +R AVV+AP+REL QI E +K Sbjct: 217 ANDGYSYQRKAFPTAVVMAPTRELATQIFDEAKK 250
>DBP3_EMENI (Q5AWA6) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 498 Score = 67.0 bits (162), Expect = 2e-11 Identities = 43/117 (36%), Positives = 64/117 (54%) Frame = +2 Query: 59 EGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKR 238 +G SPT +QSA+ P++ D + + TGSGKTLA+ LP L ++ LK +K Sbjct: 91 DGFASPTAIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKVLDLK------TKQKS 144 Query: 239 SGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 AVV++P+REL MQI ++ K D + V + GG + Q EALK ++ Sbjct: 145 CRPLAVVISPTRELAMQIYDQLVKFAEKVDIQ-VACIFGGVKKDEQREALKSAAVVV 200
>DDX3Y_MOUSE (Q62095) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) (DEAD-box RNA helicase DEAD2) (mDEAD2) (D1Pas1-related sequence 1) Length = 658 Score = 67.0 bits (162), Expect = 2e-11 Identities = 47/122 (38%), Positives = 69/122 (56%), Gaps = 7/122 (5%) Frame = +2 Query: 68 TSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEI---GP---LKRAREQGNS 229 T PT VQ +IP+I ++ D + + TGSGKT A+LLPILS+I GP LK +E G Sbjct: 200 TRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAMKENGRY 259 Query: 230 EKRSGIE-AVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPI 406 +R ++V+AP+REL +QI E K R + GGA+ +Q L++ + Sbjct: 260 GRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPC-VVYGGADTVQQIRDLERGCHL 318 Query: 407 IV 412 +V Sbjct: 319 LV 320
>SPB42_CANAL (Q59NP8) ATP-dependent rRNA helicase SPB42 (EC 3.6.1.-)| Length = 631 Score = 67.0 bits (162), Expect = 2e-11 Identities = 44/136 (32%), Positives = 78/136 (57%), Gaps = 10/136 (7%) Frame = +2 Query: 44 DRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGP-LKRAREQ 220 + ++ G + T VQ+++IP++S D V+++ TGSGKTL++++P+L +I L + Sbjct: 23 EAISSMGYPTMTPVQASTIPLLSGNKDVVVEAVTGSGKTLSFVIPVLQKISDRLYKPDSD 82 Query: 221 GN---SEKRSGIEAVVVAPSRELGMQIVREVEKILG--PDDKRL---VQQLVGGANRSRQ 376 G+ KR + ++V++P+REL QI ++L P+DK Q LVG R+ Sbjct: 83 GDLPEPVKRGHMLSIVLSPTRELANQIQSVFNQVLQYLPEDKGTRINTQLLVGSIGNVRE 142 Query: 377 E-EALKKNKPIIVVGT 421 + N+P I++GT Sbjct: 143 DLNQFLTNQPQILIGT 158
>SPB41_CANAL (Q59N29) ATP-dependent rRNA helicase SPB41 (EC 3.6.1.-)| Length = 631 Score = 67.0 bits (162), Expect = 2e-11 Identities = 44/136 (32%), Positives = 78/136 (57%), Gaps = 10/136 (7%) Frame = +2 Query: 44 DRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGP-LKRAREQ 220 + ++ G + T VQ+++IP++S D V+++ TGSGKTL++++P+L +I L + Sbjct: 23 EAISSMGYPTMTPVQASTIPLLSGNKDVVVEAVTGSGKTLSFVIPVLQKISDRLYKPDSD 82 Query: 221 GN---SEKRSGIEAVVVAPSRELGMQIVREVEKILG--PDDKRL---VQQLVGGANRSRQ 376 G+ KR + ++V++P+REL QI ++L P+DK Q LVG R+ Sbjct: 83 GDLPEPVKRGHMLSIVLSPTRELANQIQSVFNQVLQYLPEDKGTRINTQLLVGSIGNVRE 142 Query: 377 E-EALKKNKPIIVVGT 421 + N+P I++GT Sbjct: 143 DLNQFLTNQPQILIGT 158
>SPB4_YEAST (P25808) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-) (Suppressor| of PAB1 protein 4) Length = 606 Score = 66.6 bits (161), Expect = 2e-11 Identities = 42/132 (31%), Positives = 77/132 (58%), Gaps = 8/132 (6%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L+ G + T VQ+++IP+++ D V+ S TGSGKT A+++P+L ++ +E+ N+ Sbjct: 22 LDVMGFETMTPVQASTIPMLAGNKDVVVDSVTGSGKTAAFVIPVLEKV-----VKEEANT 76 Query: 230 E--KRSGIEAVVVAPSRELGMQIVREVEKILG--PDDKRLVQ-QLVGGANRSRQEEALK- 391 K++ ++++AP+REL QI V L P D ++ QL+ G N + + + Sbjct: 77 SKFKKAHFHSLIIAPTRELSRQIESVVLSFLEHYPSDLFPIKCQLLVGTNEATVRDDVSN 136 Query: 392 --KNKPIIVVGT 421 +N+P I++GT Sbjct: 137 FLRNRPQILIGT 148
>DBP3_USTMA (Q4PDT1) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 585 Score = 66.6 bits (161), Expect = 2e-11 Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 2/126 (1%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L+ +G ++PT +Q+ PV+ Q D V + TGSGKT A+ LP L + + + G Sbjct: 174 LDSQGFSTPTPIQACCWPVLLQNKDVVGIAETGSGKTFAFGLPALQHLVTKHKVLDSGKK 233 Query: 230 E-KRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPI 406 + K + + +V+AP+REL +Q + K LG + L GG ++ Q L ++ P+ Sbjct: 234 KAKGAQVNVLVIAPTRELAIQTEENMAK-LGKSMGIGMICLYGGVSKQEQVRLLNQSPPV 292 Query: 407 -IVVGT 421 IVVGT Sbjct: 293 RIVVGT 298
>HAS1_ASPOR (Q2UUN6) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 596 Score = 66.2 bits (160), Expect = 3e-11 Identities = 39/117 (33%), Positives = 66/117 (56%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G + TEVQ +IP + D + + TGSGKTL++L+P + + L+ + R+ Sbjct: 138 GFETMTEVQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAIEMLSALR-------FKPRN 190 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 G A++V+P+REL +QI +V ++L + ++GGANR + E L K ++V Sbjct: 191 GTGAIIVSPTRELALQIFGQVRELLA-HHSQTYGIVIGGANRRAEAEKLMKGVNLLV 246
>SPB4_SCHPO (O74764) ATP-dependent rRNA helicase spb4 (EC 3.6.1.-)| Length = 606 Score = 66.2 bits (160), Expect = 3e-11 Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 8/129 (6%) Frame = +2 Query: 59 EGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKR 238 +G T VQ+ +IP+ + D V+++ TGSGKTLAYLLP ++ +R ++ Sbjct: 19 QGFKKMTPVQANAIPLFLKNKDLVVEAVTGSGKTLAYLLPCFDKV--TRRDTDE------ 70 Query: 239 SGIEAVVVAPSRELGMQIVREVEKILG--PDD----KRLVQQL-VGGANRSRQEEA-LKK 394 +G+ A++VAP+REL QI +++L PD K+LV + +GG + A ++ Sbjct: 71 TGLGALIVAPTRELATQIFNVTKELLAYQPDSLDGGKKLVADMYIGGKGTLTNDLASFRE 130 Query: 395 NKPIIVVGT 421 P +V+GT Sbjct: 131 KNPSVVIGT 139
>DRS1_DEBHA (Q6BTL5) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 771 Score = 66.2 bits (160), Expect = 3e-11 Identities = 45/124 (36%), Positives = 64/124 (51%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L++ G T P+ +QSA IP+ D V + TGSGKT AY++PI+ R Sbjct: 273 LSQLGYTKPSPIQSACIPIALLGKDIVAGAVTGSGKTAAYMIPIIE--------RLLYKP 324 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 K S +V+AP+REL +Q+ +V K +G L L G RQ+E K +P I Sbjct: 325 AKISSTRVIVLAPTRELAIQVC-DVGKKIGQFVNNLNFGLAVGGLNLRQQEQQLKTRPDI 383 Query: 410 VVGT 421 V+ T Sbjct: 384 VIAT 387
>DBP10_NEUCR (Q7S9J4) ATP-dependent RNA helicase dbp-10 (EC 3.6.1.-)| Length = 934 Score = 66.2 bits (160), Expect = 3e-11 Identities = 41/121 (33%), Positives = 71/121 (58%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 + ++G + PT +Q +IP+I +R D V + TGSGKT A+++P++ R +G+S Sbjct: 114 ITRKGFSVPTPIQRKAIPLILERKDVVGMARTGSGKTAAFVIPMIE--------RLKGHS 165 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 R G A++++PSREL +Q ++ V+++ D + V LVGG + Q + N II Sbjct: 166 -PRVGSRALIMSPSRELALQTLKVVKELGRGTDLKTV-LLVGGDSLEEQFGMMASNPDII 223 Query: 410 V 412 + Sbjct: 224 I 224
>AN3_XENLA (P24346) Putative ATP-dependent RNA helicase an3 (EC 3.6.1.-)| Length = 697 Score = 66.2 bits (160), Expect = 3e-11 Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 7/122 (5%) Frame = +2 Query: 68 TSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEI---GP---LKRAREQGNS 229 T PT VQ +IP+I ++ D + + TGSGKT A+LLPILS+I GP +K +E G Sbjct: 242 TRPTPVQKHAIPIIIEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGDAMKHLQENGRY 301 Query: 230 EKRSGIE-AVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPI 406 +R ++V+AP+REL +QI E K R + GGA+ +Q L++ + Sbjct: 302 GRRKQFPLSLVLAPTRELAVQIYEEARKFAYRSRVRPC-VVYGGADIGQQIRDLERGCHL 360 Query: 407 IV 412 +V Sbjct: 361 LV 362
>MS116_ASHGO (Q750Q4) ATP-dependent RNA helicase MSS116, mitochondrial precursor| (EC 3.6.1.-) Length = 658 Score = 66.2 bits (160), Expect = 3e-11 Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 4/130 (3%) Frame = +2 Query: 44 DRLNKEGLTSPTEVQSASI-PVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 + L G T VQ ++ P++ HD V ++ TG+GKTLA+L+P+ +R E Sbjct: 139 EMLQSRGFDKLTPVQQKTLKPILQTEHDVVARAKTGTGKTLAFLMPL------FQRLLEG 192 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRL---VQQLVGGANRSRQEEALK 391 SE ++AVV+AP+R+L QI E+ ++ + K ++GG++R+ +L+ Sbjct: 193 PPSE---NVKAVVIAPTRDLAAQIFNEINEMRNANRKLRRFNAVVMMGGSSRTETFRSLE 249 Query: 392 KNKPIIVVGT 421 + +P IVV T Sbjct: 250 RRRPNIVVAT 259
>PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1156 Score = 66.2 bits (160), Expect = 3e-11 Identities = 41/124 (33%), Positives = 66/124 (53%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 +D + + G ++PT +QS ++P I D + + TGSGKT+A+LLP+ I ++Q Sbjct: 488 LDVIKRLGYSAPTPIQSQAMPAIMSGRDIIGVAKTGSGKTMAFLLPMFRHI------KDQ 541 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 E G +++ P+REL +QI RE+ + R + GGA S Q +KK Sbjct: 542 RPVEPSEGPVGIIMTPTRELAVQIYREMRPFIKALGLR-AACVYGGAPISEQIAEMKKTA 600 Query: 401 PIIV 412 I+V Sbjct: 601 DIVV 604
>DBP10_YARLI (Q6C7X8) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 926 Score = 66.2 bits (160), Expect = 3e-11 Identities = 39/124 (31%), Positives = 66/124 (53%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 + + ++G PT +Q +IP++ + D V + TGSGKT A++LP+L ++ Sbjct: 114 LKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLEKLKV------- 166 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + G AV+++PSREL +Q ++ V+ D RL LVGG + Q + + N Sbjct: 167 --HSAKVGARAVILSPSRELALQTLKVVKDFSAGTDLRLA-MLVGGDSLEEQFKMMMSNP 223 Query: 401 PIIV 412 II+ Sbjct: 224 DIII 227
>DDX3X_HUMAN (O00571) ATP-dependent RNA helicase DDX3X (EC 3.6.1.-) (DEAD box| protein 3, X-chromosomal) (Helicase-like protein 2) (HLP2) (DEAD box, X isoform) Length = 661 Score = 65.9 bits (159), Expect = 4e-11 Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 7/122 (5%) Frame = +2 Query: 68 TSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEI---GP---LKRAREQGNS 229 T PT VQ +IP+I ++ D + + TGSGKT A+LLPILS+I GP L+ +E G Sbjct: 200 TRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRY 259 Query: 230 EKRSGIE-AVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPI 406 +R ++V+AP+REL +QI E K R + GGA+ +Q L++ + Sbjct: 260 GRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPC-VVYGGADIGQQIRDLERGCHL 318 Query: 407 IV 412 +V Sbjct: 319 LV 320
>ROK1_SCHPO (Q09775) ATP-dependent RNA helicase rok1 (EC 3.6.1.-)| Length = 481 Score = 65.9 bits (159), Expect = 4e-11 Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 1/127 (0%) Frame = +2 Query: 44 DRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQG 223 + L K+ +T T +Q +IP I + D + + TGSGKT+AYL PIL ++ Sbjct: 59 ENLKKQNITECTTIQRYAIPTIGSKRDLLACAPTGSGKTIAYLFPILQKL---------- 108 Query: 224 NSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALK-KNK 400 G A++VAP+REL QI R+ EK+ ++++ + +N QE+A K + K Sbjct: 109 QLHVPGGYRAIIVAPTRELCEQIYRQAEKLSFGTSLKIIE--LSKSNEKIQEKAPKLREK 166 Query: 401 PIIVVGT 421 + +GT Sbjct: 167 YDMCIGT 173
>PRP5_ASHGO (Q754U8) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 816 Score = 65.9 bits (159), Expect = 4e-11 Identities = 40/115 (34%), Positives = 62/115 (53%) Frame = +2 Query: 68 TSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGI 247 T PT +Q+ +IP I D + S TGSGKT++++LP+L +I K R G E +G Sbjct: 258 TVPTPIQAQAIPAIMSGRDVIGISKTGSGKTVSFILPLLRQI---KAQRPLGGDE--TGP 312 Query: 248 EAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 ++++P+REL +QI EV K D GG+ RQ +K+ I++ Sbjct: 313 LGLILSPTRELALQIHEEVTKFTSGDPSIRSLCCTGGSELKRQINDIKRGVEIVI 367
>PL10_MOUSE (P16381) Putative ATP-dependent RNA helicase Pl10 (EC 3.6.1.-)| Length = 660 Score = 65.9 bits (159), Expect = 4e-11 Identities = 46/122 (37%), Positives = 69/122 (56%), Gaps = 7/122 (5%) Frame = +2 Query: 68 TSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEI---GP---LKRAREQGNS 229 T PT VQ +IP+I ++ D + + TGSGKT A+LLPILS+I GP L+ +E G Sbjct: 200 TRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALRAMKENGKY 259 Query: 230 EKRSGIE-AVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPI 406 +R ++V+AP+REL +QI E K R + GGA+ +Q L++ + Sbjct: 260 GRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPC-VVYGGADIGQQIRDLERGCHL 318 Query: 407 IV 412 +V Sbjct: 319 LV 320
>DDX3Y_PANTR (Q6GVM6) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 660 Score = 65.9 bits (159), Expect = 4e-11 Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 7/122 (5%) Frame = +2 Query: 68 TSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEI---GP---LKRAREQGNS 229 T PT VQ +IP+I + D + + TGSGKT A+LLPILS+I GP LK +E G Sbjct: 199 TRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRY 258 Query: 230 EKRSGIE-AVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPI 406 +R ++V+AP+REL +QI E K R + GGA+ +Q L++ + Sbjct: 259 GRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPC-VVYGGADIGQQIRDLERGCHL 317 Query: 407 IV 412 +V Sbjct: 318 LV 319
>DDX3Y_HUMAN (O15523) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 660 Score = 65.9 bits (159), Expect = 4e-11 Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 7/122 (5%) Frame = +2 Query: 68 TSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEI---GP---LKRAREQGNS 229 T PT VQ +IP+I + D + + TGSGKT A+LLPILS+I GP LK +E G Sbjct: 199 TRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRY 258 Query: 230 EKRSGIE-AVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPI 406 +R ++V+AP+REL +QI E K R + GGA+ +Q L++ + Sbjct: 259 GRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPC-VVYGGADIGQQIRDLERGCHL 317 Query: 407 IV 412 +V Sbjct: 318 LV 319
>DDX3Y_PONPY (Q5RF43) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 658 Score = 65.9 bits (159), Expect = 4e-11 Identities = 47/122 (38%), Positives = 68/122 (55%), Gaps = 7/122 (5%) Frame = +2 Query: 68 TSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEI---GP---LKRAREQGNS 229 T PT VQ +IP+I + D + + TGSGKT A+LLPILS+I GP LK +E G Sbjct: 199 TRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRY 258 Query: 230 EKRSGIE-AVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPI 406 +R ++V+AP+REL +QI E K R + GGA+ +Q L++ + Sbjct: 259 GRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPC-VVYGGADIGQQIRDLERGCHL 317 Query: 407 IV 412 +V Sbjct: 318 LV 319
>HAS1_ASHGO (Q74Z73) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 504 Score = 65.9 bits (159), Expect = 4e-11 Identities = 41/121 (33%), Positives = 66/121 (54%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 + K G T T+VQ+ +IP + D + + TGSGKTLA+LLP + + LK Sbjct: 54 IGKMGFTKMTQVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPAIEMLHSLK-------F 106 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + R+G +V+ P+REL +QI V + L + ++GGANR ++ E L K ++ Sbjct: 107 KPRNGTGVIVITPTRELALQIF-GVARELMEFHSQTFGIVIGGANRRQEAEKLAKGVNLL 165 Query: 410 V 412 + Sbjct: 166 I 166
>PRP28_CRYNE (Q5KNF8) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 738 Score = 65.5 bits (158), Expect = 5e-11 Identities = 40/124 (32%), Positives = 66/124 (53%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 +D + + G P+ +Q +IP+ Q D + + TGSGKT A+++P+L IG L + Sbjct: 327 LDIIEEIGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVIPMLDYIGHLPPLND- 385 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + G A+++AP+REL QI E + P + V +VGG + Q+ AL+ Sbjct: 386 --DNRHLGPYALIMAPTRELAQQIETETRRFALPLGYKCV-SIVGGRSVEEQQFALRDGA 442 Query: 401 PIIV 412 II+ Sbjct: 443 EIII 446
>RRP3_SCHPO (Q9P6N8) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 465 Score = 65.5 bits (158), Expect = 5e-11 Identities = 46/122 (37%), Positives = 64/122 (52%) Frame = +2 Query: 56 KEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEK 235 K G +PT +Q +IPV+ + D + + TGSGKT A+ LP++ E+ Sbjct: 63 KLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQELW-----------NN 111 Query: 236 RSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVV 415 S AVV+AP+REL QI + E I G R V +VGG + Q AL K KP ++V Sbjct: 112 PSPFFAVVLAPTRELAYQISEQFEAIGGSIGVRSV-VIVGGMDMVTQAVALSK-KPHVLV 169 Query: 416 GT 421 T Sbjct: 170 CT 171
>DBP8_DEBHA (Q6BGU8) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 441 Score = 65.5 bits (158), Expect = 5e-11 Identities = 45/126 (35%), Positives = 68/126 (53%) Frame = +2 Query: 44 DRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQG 223 + LN + +PT +QSA IP I + HD + + TGSGKT+A+ P+L++ Sbjct: 14 EALNSMKIHTPTTIQSACIPKILKGHDCIGGAKTGSGKTIAFAAPMLTQW---------- 63 Query: 224 NSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKP 403 SE SGI +V+ P+REL +QI + LG V +VGG + +Q L++ +P Sbjct: 64 -SEDPSGIYGLVLTPTRELALQIAEQF-AALGSSMNIKVSVIVGGEDIVKQALELQR-RP 120 Query: 404 IIVVGT 421 VV T Sbjct: 121 HFVVAT 126
>DDX3X_MOUSE (Q62167) ATP-dependent RNA helicase DDX3X (EC 3.6.1.-) (DEAD box| protein 3, X-chromosomal) (DEAD box RNA helicase DEAD3) (mDEAD3) (Embryonic RNA helicase) (D1Pas1-related sequence 2) Length = 661 Score = 65.5 bits (158), Expect = 5e-11 Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 7/88 (7%) Frame = +2 Query: 68 TSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEI---GP---LKRAREQGNS 229 T PT VQ +IP+I ++ D + + TGSGKT A+LLPILS+I GP L+ +E G Sbjct: 200 TRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRY 259 Query: 230 EKRSGIE-AVVVAPSRELGMQIVREVEK 310 +R ++V+AP+REL +QI E K Sbjct: 260 GRRKQYPISLVLAPTRELAVQIYEEARK 287
>DBP10_KLULA (Q6CIR0) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 973 Score = 65.1 bits (157), Expect = 6e-11 Identities = 37/124 (29%), Positives = 66/124 (53%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 ++K+G PT +Q +IP+I Q+ D V + TGSGKT A++LP++ ++ Sbjct: 141 ISKKGFRQPTPIQRKTIPLILQKRDIVGMARTGSGKTAAFVLPMIEKL---------KTH 191 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + G+ AV+++PSREL +Q R ++ D R + L+ G + + + P + Sbjct: 192 SAKIGVRAVILSPSRELAIQTHRVFKEFSKGSDLRSI--LLTGGDSLEDQFGMMMGNPDV 249 Query: 410 VVGT 421 V+ T Sbjct: 250 VIAT 253
>DBP9_YEAST (Q06218) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-) (DEAD box| protein 9) Length = 594 Score = 65.1 bits (157), Expect = 6e-11 Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 1/121 (0%) Frame = +2 Query: 62 GLTSPTEVQSASIPV-ISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKR 238 G PT +QS +IP+ + Q+ D + ++ TGSGKTLAYL+P++ I K+ + G + Sbjct: 36 GFQYPTLIQSHAIPLALQQKRDIIAKAATGSGKTLAYLIPVIETILEYKKTIDNG---EE 92 Query: 239 SGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVG 418 +G +++ P+REL Q+ +EK++ K + + L ++P I+VG Sbjct: 93 NGTLGIILVPTRELAQQVYNVLEKLVLYCSKDIRTLNISSDMSDSVLSTLLMDQPEIIVG 152 Query: 419 T 421 T Sbjct: 153 T 153
>DBP9_CANAL (Q5A4P9) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 574 Score = 65.1 bits (157), Expect = 6e-11 Identities = 35/128 (27%), Positives = 73/128 (57%), Gaps = 1/128 (0%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPV-ISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRARE 217 + +++ G ++PT +QS++IP+ + ++ D + ++ TGSGKT AY +PI++ + Sbjct: 26 LQAIDQLGFSNPTLIQSSAIPLALEEKRDIIAKASTGSGKTAAYCIPIVNNL-------- 77 Query: 218 QGNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKN 397 + GI+++++ P+REL Q+ + VEK+L ++ + + + +L N Sbjct: 78 -LTDDSAQGIKSIILVPTRELSNQVFQFVEKLLTFSTNKINVLNLSSSYSDQVLNSLLVN 136 Query: 398 KPIIVVGT 421 KP I++ T Sbjct: 137 KPEIIIST 144
>PRP28_SCHPO (Q9Y7T7) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 662 Score = 65.1 bits (157), Expect = 6e-11 Identities = 45/121 (37%), Positives = 62/121 (51%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L K P+ +Q A+IPV+ QR D + + TGSGKT A+++P++ I L E S Sbjct: 264 LKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETGSGKTAAFIIPLIIAISKLPPLTE---S 320 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 G AVV+AP+REL QI E K P R V +VGG Q + + I+ Sbjct: 321 NMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLGFRCV-SVVGGHAFEEQSFQMSQGAHIV 379 Query: 410 V 412 V Sbjct: 380 V 380
>DBP3_ASPFU (Q4WH83) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 503 Score = 65.1 bits (157), Expect = 6e-11 Identities = 47/121 (38%), Positives = 67/121 (55%), Gaps = 3/121 (2%) Frame = +2 Query: 68 TSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEI---GPLKRAREQGNSEKR 238 +SPT +QSA+ P++ D + + TGSGKTLA+ LP + +I G +KR K Sbjct: 106 SSPTPIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCIKKILDSGKVKR--------KH 157 Query: 239 SGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVG 418 + AV+++P+REL MQI ++ K D R V + GG + Q EALK IVV Sbjct: 158 ARPAAVIISPTRELAMQIYDQLSKFGASVDIR-VTCIYGGVKKDEQREALK--TAAIVVA 214 Query: 419 T 421 T Sbjct: 215 T 215
>PRP5_YEAST (P21372) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 849 Score = 64.7 bits (156), Expect = 8e-11 Identities = 39/114 (34%), Positives = 61/114 (53%) Frame = +2 Query: 71 SPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGIE 250 S T +QS ++P I D + S TGSGKT++YLLP+L ++ ++ S+ +G Sbjct: 278 SLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQV-----KAQRPLSKHETGPM 332 Query: 251 AVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 +++AP+REL +QI EV K D GG+ +Q LK+ I+V Sbjct: 333 GLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVV 386
>ROK1_YARLI (Q6CDS6) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 547 Score = 64.7 bits (156), Expect = 8e-11 Identities = 33/85 (38%), Positives = 52/85 (61%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L K T PT +Q SIP + D + + TGSGKT+AY +P++ +G +++G+ Sbjct: 126 LKKNKYTDPTPIQCESIPTMLNGRDLIACAPTGSGKTMAYSIPMVEMLG-----KKKGSK 180 Query: 230 EKRSGIEAVVVAPSRELGMQIVREV 304 + + GI+A+VVAP++EL QI V Sbjct: 181 DAKKGIKALVVAPTKELASQIFNAV 205
>DRS1_CANAL (Q5ACK7) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 613 Score = 64.7 bits (156), Expect = 8e-11 Identities = 41/118 (34%), Positives = 64/118 (54%) Frame = +2 Query: 68 TSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGI 247 T PT +QSASIP+ D V + TGSGKT AY++PI+ E+ + + Sbjct: 151 TKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPII----------ERLLYKPSTST 200 Query: 248 EAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 + +++ P+REL +Q+ +K+ + + VGG N +QEE L K +P IV+ T Sbjct: 201 KVIILTPTRELALQVYEFGKKLSHHVNNLNIGLAVGGLNLRQQEEQL-KTRPDIVIAT 257
>DDX53_HUMAN (Q86TM3) Probable ATP-dependent RNA helicase DDX53 (EC 3.6.1.-)| (DEAD box protein 53) (DEAD box protein CAGE) (Cancer-associated gene protein) Length = 631 Score = 64.7 bits (156), Expect = 8e-11 Identities = 40/117 (34%), Positives = 63/117 (53%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G+ PT +QS + P+I Q D ++ + TG+GKTL+YL+P + +REQ R+ Sbjct: 241 GILKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQ-----RN 295 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 G +V+ P+REL + + E K K + + GG NR+ Q E + K II+ Sbjct: 296 GPGMLVLTPTRELALHVEAECSKYSYKGLKSIC--IYGGRNRNGQIEDISKGVDIII 350
>DRS1_KLULA (Q6CJV1) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 748 Score = 64.3 bits (155), Expect = 1e-10 Identities = 47/125 (37%), Positives = 70/125 (56%), Gaps = 1/125 (0%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L G TSP+ +QSA+IP+ D + + TGSGKT A+++PI+ + L + ++ Sbjct: 248 LGSLGYTSPSPIQSAAIPIALLGKDIIAGAVTGSGKTAAFMIPIIERL--LYKPAHIAST 305 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQL-VGGANRSRQEEALKKNKPI 406 VV+ P+REL +Q V +V K +G L L VGG N +QE+AL K +P Sbjct: 306 ------RVVVLTPTRELAIQ-VADVGKNIGKFVNGLTFGLAVGGLNLRQQEQAL-KTRPD 357 Query: 407 IVVGT 421 IV+ T Sbjct: 358 IVIAT 362
>PRP5_CANGA (Q6FML5) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 816 Score = 64.3 bits (155), Expect = 1e-10 Identities = 42/114 (36%), Positives = 65/114 (57%) Frame = +2 Query: 71 SPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGIE 250 S T +Q+ +IP I D + S TGSGKT++YLLP++ + K+ R N E +G Sbjct: 274 SLTPIQTQTIPAIMSGRDVIGISKTGSGKTISYLLPMIRHVKAQKKLR---NGE--TGPI 328 Query: 251 AVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 AV+ AP+REL +QI EV+K++ D + GG++ +Q + LK I + Sbjct: 329 AVIFAPTRELAVQINEEVQKLISDLDISSI-CCTGGSDLKKQIDKLKTGVEIAI 381
>DDX46_BRARE (Q4TVV3) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1018 Score = 64.3 bits (155), Expect = 1e-10 Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 3/127 (2%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ L K PT +Q+ +IP I D + + TGSGKT+A+LLP+ I R Sbjct: 352 LNALKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHI---LDQRPV 408 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLV---GGANRSRQEEALK 391 G +E G AV++ P+REL +QI +E +K K L ++V GG S Q LK Sbjct: 409 GEAE---GPLAVIMTPTRELALQITKECKKF----SKSLALRVVCVYGGTGISEQIAELK 461 Query: 392 KNKPIIV 412 + IIV Sbjct: 462 RGAEIIV 468
>MAK5_CANAL (Q59ZH9) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-)| Length = 782 Score = 64.3 bits (155), Expect = 1e-10 Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 3/124 (2%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSE-IGPLKRAREQGN 226 L++ PT +Q +IP+ D + ++ TGSGKTLAY +PIL + I L ++ Sbjct: 212 LSQLDFKKPTPIQKETIPIALSGKDVIGKATTGSGKTLAYGIPILEKYIQSLNLIKQNNK 271 Query: 227 SEKRSGIEAVVVAPSRELGMQIVREVEKI--LGPDDKRLVQQLVGGANRSRQEEALKKNK 400 +K + ++ AP+REL Q+V + K+ P R + + GG + +Q+ L+ Sbjct: 272 DKKINHPTGIIFAPTRELAHQVVDHLNKLAKYSPLSTRGIVSITGGLSIQKQQRLLRHGP 331 Query: 401 PIIV 412 IIV Sbjct: 332 GIIV 335
>H669_METJA (Q58083) Probable ATP-dependent RNA helicase MJ0669 (EC 3.6.1.-)| Length = 367 Score = 64.3 bits (155), Expect = 1e-10 Identities = 38/128 (29%), Positives = 72/128 (56%), Gaps = 1/128 (0%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPV-ISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRARE 217 ++ + +G PT++Q IP+ ++ ++ V Q+ TGSGKT ++ +P++ + Sbjct: 18 LNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFAIPLIELVN------- 70 Query: 218 QGNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKN 397 + +GIEA+++ P+REL +Q+ E+E + G + + + ++ GG Q +ALK Sbjct: 71 -----ENNGIEAIILTPTRELAIQVADEIESLKGNKNLK-IAKIYGGKAIYPQIKALKNA 124 Query: 398 KPIIVVGT 421 IVVGT Sbjct: 125 N--IVVGT 130
>HAS1_NEUCR (Q7S2N9) ATP-dependent RNA helicase has-1 (EC 3.6.1.-)| Length = 578 Score = 64.3 bits (155), Expect = 1e-10 Identities = 40/117 (34%), Positives = 63/117 (53%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G T TE+Q IP + D + + TGSGKTLA+L+P + + L+ + R+ Sbjct: 126 GFTKMTEIQRRGIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLSSLR-------FKPRN 178 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 G A+VV P+REL +QI V + L + + ++GGANR + E L K +++ Sbjct: 179 GTGAIVVTPTRELALQIF-GVARELMKNHSQTYGVVIGGANRRAEAEKLGKGVNLLI 234
>HAS1_CANGA (Q6FIL3) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 494 Score = 64.3 bits (155), Expect = 1e-10 Identities = 39/121 (32%), Positives = 66/121 (54%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 + K G + T VQ+ +IP + D + + TGSGKTLA+LLP + + LK Sbjct: 44 IEKMGFSKMTPVQARTIPPLMAGRDVLGAAKTGSGKTLAFLLPTIELLHSLK-------F 96 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + R+G +++ P+REL +QI V +++ + ++GGANR ++ E L K ++ Sbjct: 97 KPRNGTGVIIITPTRELALQIFGVVRELM-EFHSQTFGIVIGGANRRQEAEKLMKGVNLL 155 Query: 410 V 412 V Sbjct: 156 V 156
>MAK5_NEUCR (Q7RZH4) ATP-dependent RNA helicase mak-5 (EC 3.6.1.-)| Length = 805 Score = 63.9 bits (154), Expect = 1e-10 Identities = 38/118 (32%), Positives = 65/118 (55%), Gaps = 1/118 (0%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 I + K + PT +QS +IP I HD + ++ TGSGKTLA+ +P++ R+Q Sbjct: 221 ISSIAKLRFSKPTVIQSKAIPEIMAGHDVIGKASTGSGKTLAFGIPVIESWLSAAETRKQ 280 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKIL-GPDDKRLVQQLVGGANRSRQEEALK 391 N E+R G A++++P+REL QI ++ + G + ++GG +Q+ L+ Sbjct: 281 -NKEERKGATALILSPTRELAQQIRDHLQALCKGLPTAPYICSVLGGMAVQKQKRQLQ 337
>DBP10_CANAL (Q5ANB2) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 908 Score = 63.9 bits (154), Expect = 1e-10 Identities = 41/123 (33%), Positives = 73/123 (59%), Gaps = 1/123 (0%) Frame = +2 Query: 56 KEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEK 235 K+G PT +Q +IP+I + D V + TGSGKT A++LP++ + ++R+ G Sbjct: 116 KKGYKQPTPIQRKTIPLIMEGRDVVGMARTGSGKTAAFVLPLIERL----KSRQPG---- 167 Query: 236 RSGIEAVVVAPSRELGMQIVREVEKIL-GPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 G+ AV+++PSREL +Q ++V++ G + + +V L+GG + ++ + KP I+ Sbjct: 168 --GVRAVILSPSRELALQTYKQVKEFSHGTNLQSIV--LIGG-DSLEEDFSKMMTKPDII 222 Query: 413 VGT 421 V T Sbjct: 223 VCT 225
>MAK5_EMENI (Q5BCI0) ATP-dependent RNA helicase mak5 (EC 3.6.1.-)| Length = 770 Score = 63.9 bits (154), Expect = 1e-10 Identities = 42/127 (33%), Positives = 70/127 (55%), Gaps = 3/127 (2%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L+K ++PT VQ + IP I HD + ++ TGSGKTLA+ LPIL +R + + Sbjct: 212 LSKLKFSTPTSVQKSCIPPILDGHDVIGKASTGSGKTLAFGLPILEHYLERERRKTIDSE 271 Query: 230 EKRSGIE-AVVVAPSRELGMQIVREVEKIL--GPDDKRLVQQLVGGANRSRQEEALKKNK 400 E++ I A++++P+REL Q+ + + ++ P L GG + +Q+ L+ Sbjct: 272 EEKEKIPIALILSPTRELAHQLQKHIYGLISNAPGVNARTALLTGGLSVQKQQRLLETAD 331 Query: 401 PIIVVGT 421 IV+GT Sbjct: 332 --IVIGT 336
>DDX23_PONPY (Q5RC67) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) Length = 820 Score = 63.5 bits (153), Expect = 2e-10 Identities = 42/124 (33%), Positives = 67/124 (54%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ ++K G PT +Q +IP+ Q D + + TGSGKT A+L+P+L I L + Sbjct: 403 LEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRI 462 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 S++ G A+++AP+REL QI E K P R V ++GG +R Q L+ Sbjct: 463 EESDQ--GPYAIILAPTRELAQQIEEETIKFGKPLGIRTV-AVIGGISREDQGFRLRMGC 519 Query: 401 PIIV 412 I++ Sbjct: 520 EIVI 523
>DDX23_HUMAN (Q9BUQ8) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-)| (DEAD box protein 23) (100 kDa U5 snRNP-specific protein) (U5-100kD) (PRP28 homolog) Length = 820 Score = 63.5 bits (153), Expect = 2e-10 Identities = 42/124 (33%), Positives = 67/124 (54%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ ++K G PT +Q +IP+ Q D + + TGSGKT A+L+P+L I L + Sbjct: 403 LEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRI 462 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 S++ G A+++AP+REL QI E K P R V ++GG +R Q L+ Sbjct: 463 EESDQ--GPYAIILAPTRELAQQIEEETIKFGKPLGIRTV-AVIGGISREDQGFRLRMGC 519 Query: 401 PIIV 412 I++ Sbjct: 520 EIVI 523
>SPB4_NEUCR (Q873H9) ATP-dependent rRNA helicase spb-4 (EC 3.6.1.-)| Length = 654 Score = 63.5 bits (153), Expect = 2e-10 Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 22/149 (14%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 +D L+ G T PT VQ + + + D V+++ TGSGKTLA+L+P++ + L R E Sbjct: 29 LDYLSSMGFTQPTPVQKSCLELFRGNKDVVVEAVTGSGKTLAFLIPVVEK---LLRGEEP 85 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKIL-------------GPDDKR--------L 337 KR+ ++ ++++P+REL QI + ++ D+KR + Sbjct: 86 A---KRNHVQGIIISPTRELATQIYNVLVSLVKFHEPSAEAISHAKSDEKRPTATQPVVV 142 Query: 338 VQQLVGGANRSRQE-EALKKNKPIIVVGT 421 Q LVGG ++ ++ + P +++GT Sbjct: 143 PQLLVGGTTKAAEDLGTFLRLSPNLLIGT 171
>DED1_ASHGO (Q75B50) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 623 Score = 63.5 bits (153), Expect = 2e-10 Identities = 43/129 (33%), Positives = 69/129 (53%), Gaps = 5/129 (3%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEI---GPLKRA 211 ++ + T PT VQ S+P++++ D + + TGSGKT +L P+LS+ GP Sbjct: 158 LENIKLARFTKPTPVQKYSVPIVAKGRDLMACAQTGSGKTGGFLFPVLSQSFSNGPASTP 217 Query: 212 REQGNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLV--GGANRSRQEEA 385 E G +++ AVV+AP+REL QI E +K + V+ V GGA+ +Q Sbjct: 218 DESGYYMRKAYPTAVVLAPTRELATQIFDEAKKF---TYRSWVKPCVVYGGADIRQQIRE 274 Query: 386 LKKNKPIIV 412 L++ +IV Sbjct: 275 LERGCDLIV 283
>DBP9_SCHPO (O60080) ATP-dependent RNA helicase dbp9 (EC 3.6.1.-)| Length = 595 Score = 63.5 bits (153), Expect = 2e-10 Identities = 41/124 (33%), Positives = 65/124 (52%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 ++K PT VQS +IP+ + D V Q+ TGSGKT AYL+PIL + +++ Sbjct: 29 IHKCEFEKPTSVQSETIPLALEGKDLVAQARTGSGKTAAYLIPILELL-----LKQKQID 83 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 E + GI A+++ P+REL Q+ +EK+ K + V + + L + P I Sbjct: 84 ENQRGIFALLLVPTRELAQQVYNVLEKLTAFCSKHIRFINVATNSSDTVQRPLLLDLPDI 143 Query: 410 VVGT 421 V+ T Sbjct: 144 VIAT 147
>DBP8_EMENI (Q5B3H7) ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)| Length = 525 Score = 63.5 bits (153), Expect = 2e-10 Identities = 42/127 (33%), Positives = 63/127 (49%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 + L + PT +Q A IP I + D + S TGSGKT+A+ +PIL Q Sbjct: 107 VGSLTTMAVRKPTAIQRACIPEILKGRDCIGGSRTGSGKTIAFSVPIL-----------Q 155 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 +E GI AV++ P+REL +QI +++ I P + V L+ G R + + Sbjct: 156 KWAEDPFGIFAVILTPTRELALQIFEQIKAISAPQSMKPV--LITGGTDMRSQAIELAGR 213 Query: 401 PIIVVGT 421 P +VV T Sbjct: 214 PHVVVAT 220
>PRP5_ASPFU (Q4WT99) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1211 Score = 63.5 bits (153), Expect = 2e-10 Identities = 42/124 (33%), Positives = 64/124 (51%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 +D + K G +PT +QS +IP I D + + TGSGKT+A+L+P+ I R+Q Sbjct: 587 LDVIQKLGYENPTSIQSQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHI------RDQ 640 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 E G +++ P+REL QI ++ + L + R V GGA Q LK+ Sbjct: 641 RPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAV-CAYGGAPIKDQIAELKRGA 699 Query: 401 PIIV 412 I+V Sbjct: 700 EIVV 703
>ROK1_ASPFU (Q4WRH5) ATP-dependent RNA helicase rok1 (EC 3.6.1.-)| Length = 739 Score = 63.5 bits (153), Expect = 2e-10 Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 14/105 (13%) Frame = +2 Query: 44 DRLNKEGLTSPTEVQSASIPVI--------------SQRHDAVIQSYTGSGKTLAYLLPI 181 + + ++G T PTEVQ ++P++ S D ++ + TGSGKTL++L+P+ Sbjct: 205 ENIAEQGFTVPTEVQLGTLPLLLGGFKASGNSKSAESIEPDLLVVAPTGSGKTLSFLIPV 264 Query: 182 LSEIGPLKRAREQGNSEKRSGIEAVVVAPSRELGMQIVREVEKIL 316 +++I R EK GI +V+VAP++EL QIV E K++ Sbjct: 265 INKI-----VRHHHEQEKERGIFSVIVAPTKELASQIVNEGRKLV 304
>DBP7_KLULA (Q6CK32) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)| Length = 740 Score = 63.5 bits (153), Expect = 2e-10 Identities = 48/129 (37%), Positives = 69/129 (53%), Gaps = 2/129 (1%) Frame = +2 Query: 41 IDRLN-KEGLTSPTEVQSASIPVISQ-RHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAR 214 + LN K ++ PT++Q IP Q ++D I + TGSGKTLA+LLPI I L + Sbjct: 161 VSHLNVKMKISKPTKIQKLVIPPFLQAQNDLFIHAQTGSGKTLAFLLPIFQSILSLGQ-- 218 Query: 215 EQGNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKK 394 N ++SG A+VV P+REL QI +V L LV L+ G R + E+A + Sbjct: 219 ---NITRQSGCFALVVTPTRELANQIY-QVTSELAQCCHFLVPCLLIGGERKKSEKARLR 274 Query: 395 NKPIIVVGT 421 ++GT Sbjct: 275 KGANFIIGT 283
>HAS1_YARLI (Q6C7D2) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 605 Score = 63.5 bits (153), Expect = 2e-10 Identities = 41/121 (33%), Positives = 66/121 (54%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L G + T VQ +IP + D + + TGSGKTLA+L+P + + LK Sbjct: 146 LKDMGFETMTPVQEKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLRKLK-------F 198 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + R+G +VV+P+REL +QI V + L + + + ++GG NR ++EE L K ++ Sbjct: 199 KPRNGTGVIVVSPTRELALQIY-GVARDLMANHSQTLGIVIGGNNRRQEEEKLNKGVNLL 257 Query: 410 V 412 V Sbjct: 258 V 258
>DBP10_GIBZE (Q4HZ42) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 897 Score = 63.2 bits (152), Expect = 2e-10 Identities = 39/121 (32%), Positives = 68/121 (56%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 + ++G + PT +Q +IP+I R D V + TGSGKT A+++P++ ++ RA Sbjct: 97 ITRKGFSVPTPIQRKAIPLILDRKDLVGMARTGSGKTAAFVIPMIEKL----RAH----- 147 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 R G A++++PSREL +Q ++ V++ D + V LVGG + Q + N I+ Sbjct: 148 SARFGTRALIMSPSRELAIQTLKVVKEFSRGTDLKCV-LLVGGDSLEEQFGYMAANPDIV 206 Query: 410 V 412 + Sbjct: 207 I 207
>DRS1_CANGA (Q6FW42) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 725 Score = 63.2 bits (152), Expect = 2e-10 Identities = 41/124 (33%), Positives = 63/124 (50%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L+ G P+ +QSA+IP+ D + + TGSGKT A+++PI+ R Sbjct: 221 LSNLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIE--------RLLYKP 272 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 K + +V+ P+REL +Q V +V K +G L L G RQ+E + K +P I Sbjct: 273 AKVASTRVIVLTPTRELAIQ-VADVGKKIGQFVSNLTFGLAVGGLNLRQQEQMLKTRPDI 331 Query: 410 VVGT 421 V+ T Sbjct: 332 VIAT 335
>DBP8_ASPOR (Q2UKX3) ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)| Length = 443 Score = 63.2 bits (152), Expect = 2e-10 Identities = 40/127 (31%), Positives = 63/127 (49%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 + L + PT +Q A IP I + D + S TGSGKT+A+ +PIL Q Sbjct: 25 VGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAFAVPIL-----------Q 73 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 ++ GI AVV+ P+REL +QI +++ I P + + L+ G R + + Sbjct: 74 KWAQDPFGIFAVVLTPTRELALQIYEQIKAISAPQSMKPL--LITGGTDMRSQALALSQR 131 Query: 401 PIIVVGT 421 P +V+ T Sbjct: 132 PHVVIAT 138
>DBP9_ASHGO (Q74ZC1) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 595 Score = 63.2 bits (152), Expect = 2e-10 Identities = 35/90 (38%), Positives = 58/90 (64%), Gaps = 1/90 (1%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPV-ISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGN 226 L G PT +QS++IP+ + Q+ D + ++ TGSGKTLAYL+P++ I L+ QG Sbjct: 31 LKSSGFHHPTLIQSSAIPLALEQKRDIIAKASTGSGKTLAYLIPVVQTI--LEHKSTQG- 87 Query: 227 SEKRSGIEAVVVAPSRELGMQIVREVEKIL 316 +++ +G VV+ P+REL Q+ +EK++ Sbjct: 88 ADRTTGTLGVVLVPTRELAQQVRVVLEKLV 117
>HAS1_YEAST (Q03532) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-) (Helicase| associated with SET1 protein 1) Length = 505 Score = 63.2 bits (152), Expect = 2e-10 Identities = 40/121 (33%), Positives = 66/121 (54%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 + K G T+ T VQ+ +IP + D + + TGSGKTLA+L+P + + LK Sbjct: 57 IEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSLK-------F 109 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + R+G +V+ P+REL +QI V + L + ++GGANR ++ E L K ++ Sbjct: 110 KPRNGTGIIVITPTRELALQIF-GVARELMEFHSQTFGIVIGGANRRQEAEKLMKGVNML 168 Query: 410 V 412 + Sbjct: 169 I 169
>ROK1_KLULA (Q6CSW1) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 579 Score = 63.2 bits (152), Expect = 2e-10 Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 5/132 (3%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ L + T PT +QS SIP++ D + + TGSGKTLA+L+P+L +I Sbjct: 145 LNNLIENNFTEPTPIQSESIPILLHERDMIACAPTGSGKTLAFLIPLLQQI--------- 195 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGP---DDKRLVQ--QLVGGANRSRQEEA 385 N + G++ ++++P++EL QI E K+ D KR +Q L + + + Sbjct: 196 INDKTTVGLKGLIISPTKELANQIFIECSKLANKIYLDKKRPLQVALLSKSLSSKLKNKV 255 Query: 386 LKKNKPIIVVGT 421 + ++K I++ T Sbjct: 256 ISEDKYDIIIST 267
>DED1_KLULA (Q6CLR3) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 627 Score = 62.8 bits (151), Expect = 3e-10 Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 4/94 (4%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSE---IGPLKRA 211 +D + T PT VQ S+P+++ D + + TGSGKT +L P+LSE GP Sbjct: 171 LDNIKLARFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESFSSGPASTP 230 Query: 212 REQGNSE-KRSGIEAVVVAPSRELGMQIVREVEK 310 GNS K+ AV++AP+REL QI E +K Sbjct: 231 EAAGNSYIKKVYPTAVILAPTRELATQIYDEAKK 264
>HAS1_KLULA (Q6CXB7) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 497 Score = 62.8 bits (151), Expect = 3e-10 Identities = 40/121 (33%), Positives = 65/121 (53%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 + K G T T VQ+ +IP + D + + TGSGKTLA+L+P + + LK Sbjct: 49 IGKMGFTQMTAVQTRTIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEMLHSLK-------F 101 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + R+G +V+ P+REL +QI V + L + ++GGANR ++ + L K I+ Sbjct: 102 KPRNGTGVIVITPTRELALQIF-GVARELMEFHSQTFGIVIGGANRRQEADKLMKGVNIL 160 Query: 410 V 412 + Sbjct: 161 I 161
>DBP7_ASHGO (Q754J2) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)| Length = 710 Score = 62.8 bits (151), Expect = 3e-10 Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 1/123 (0%) Frame = +2 Query: 56 KEGLTSPTEVQSASIP-VISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSE 232 K + PT++Q +IP V++ + D + + TGSGKTLA+LLP+L + L++ + Sbjct: 152 KMKIQKPTKIQKMAIPEVLNGKADLFLHAQTGSGKTLAFLLPVLQTLLSLEQ-----RID 206 Query: 233 KRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 + SG A++V P+REL QI V L LV L+ G R + E+A + + Sbjct: 207 RHSGCFAMIVTPTRELAAQIY-GVISTLAQCCHYLVPCLLVGGERKKSEKARLRKGANFI 265 Query: 413 VGT 421 VGT Sbjct: 266 VGT 268
>DBP10_SCHPO (Q09719) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 848 Score = 62.8 bits (151), Expect = 3e-10 Identities = 40/122 (32%), Positives = 67/122 (54%) Frame = +2 Query: 56 KEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEK 235 K+G +PT +Q +IP++ + D V + TGSGKT A+++P++ + ++ Sbjct: 86 KKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEHL---------KSTLA 136 Query: 236 RSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVV 415 S A++++P+REL +Q V+ V+ D R V +VGG + Q +L KP IVV Sbjct: 137 NSNTRALILSPNRELALQTVKVVKDFSKGTDLRSV-AIVGGVSLEEQ-FSLLSGKPDIVV 194 Query: 416 GT 421 T Sbjct: 195 AT 196
>HAS1_GIBZE (Q4IEK8) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 590 Score = 62.8 bits (151), Expect = 3e-10 Identities = 37/121 (30%), Positives = 64/121 (52%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 +N+ T TE+Q IP D + + TGSGKTLA+L+P++ + L+ Sbjct: 130 INEMKFTKMTEIQRRGIPPSLAGRDVLGAAKTGSGKTLAFLIPVIEMLSSLR-------F 182 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + R+G +VV+P+REL +QI +++ + ++GGANR + E L K ++ Sbjct: 183 KPRNGTGVIVVSPTRELALQIFGVARELMA-HHSQTYGIVIGGANRRAEAEKLAKGVNLL 241 Query: 410 V 412 + Sbjct: 242 I 242
>DBP8_CANAL (Q59PR3) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 440 Score = 62.8 bits (151), Expect = 3e-10 Identities = 43/126 (34%), Positives = 69/126 (54%) Frame = +2 Query: 44 DRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQG 223 + L+ + +PT +QSA IP I + HD + + TGSGKT+A+ P+L++ Sbjct: 14 ESLDAMKIYTPTAIQSACIPAILKGHDCIGGAKTGSGKTIAFAAPMLTQW---------- 63 Query: 224 NSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKP 403 SE GI +++ P+REL +QI + LG + V +VGG + +Q AL++ KP Sbjct: 64 -SEDPFGIFGLILTPTRELALQIAEQF-AALGANMNIKVAVVVGGEDFVQQTLALQR-KP 120 Query: 404 IIVVGT 421 V+ T Sbjct: 121 HFVIAT 126
>HAS1_USTMA (Q4P6N0) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 517 Score = 62.8 bits (151), Expect = 3e-10 Identities = 40/117 (34%), Positives = 65/117 (55%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G + TEVQ+ IP + D + + TGSGKTL++L+P + + LK + R+ Sbjct: 69 GFKTMTEVQARCIPPLMAGKDVLGAAQTGSGKTLSFLIPAIEMLHRLK-------FKPRN 121 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 G A++++P+REL +QI V K L + ++GGANR + + L+K +IV Sbjct: 122 GTGAIIISPTRELALQIF-GVAKELMAHHHQTFGIIMGGANRRAEADKLQKGVNLIV 177
>DED1_YEAST (P06634) ATP-dependent RNA helicase DED1 (EC 3.6.1.-) (DEAD box| protein 1) Length = 604 Score = 62.8 bits (151), Expect = 3e-10 Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 4/94 (4%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSE---IGPLKRA 211 ++ + T PT VQ S+P+++ D + + TGSGKT +L P+LSE GP + Sbjct: 154 LENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQP 213 Query: 212 REQGNSEKRSGI-EAVVVAPSRELGMQIVREVEK 310 QG+ +R AV++AP+REL QI E +K Sbjct: 214 ESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKK 247
>PRP5_CANAL (Q5ADL0) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 884 Score = 62.4 bits (150), Expect = 4e-10 Identities = 38/113 (33%), Positives = 62/113 (54%) Frame = +2 Query: 74 PTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGIEA 253 P+ +QS ++P I D + + TGSGKTL+Y+LP+L I ++Q S+ G Sbjct: 317 PSAIQSQALPTILSGRDVIGIAKTGSGKTLSYVLPMLRHI------QDQQFSKDNQGPIG 370 Query: 254 VVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 ++++P+REL +QI +E+ ++ V GG++ Q LKK IIV Sbjct: 371 LILSPTRELALQIEKEILNFTKRNNNLRVCCCYGGSSIENQINELKKGVEIIV 423
>HAS1_EMENI (Q5BBY1) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 609 Score = 62.4 bits (150), Expect = 4e-10 Identities = 37/121 (30%), Positives = 65/121 (53%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 + + G + TE+Q +IP + D + + TGSGKTLA+L+P + + L+ Sbjct: 143 IKEMGFETMTEIQQRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLSALR-------F 195 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + R+G +VV+P+REL +QI ++L + ++GGANR + E L K ++ Sbjct: 196 KPRNGTGVIVVSPTRELALQIFGVARELL-TAHSQTYGIVIGGANRRAEAEKLTKGVNLL 254 Query: 410 V 412 + Sbjct: 255 I 255
>MAK5_ASHGO (Q757I6) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-)| Length = 752 Score = 62.4 bits (150), Expect = 4e-10 Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 4/128 (3%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L++ G ++PTE+Q SIP HD + ++ TGSGKTLAY +PIL I R+ +S Sbjct: 195 LSRLGFSNPTEIQLQSIPKALDGHDIMGKASTGSGKTLAYGIPILEGI-----IRDDTDS 249 Query: 230 EKRSGIEAVVVAPSRELGMQI---VREVEKILGPDDKRLVQQLVGGANRSRQEEALK-KN 397 ++ P+REL Q+ +REV +L + + L GG + +QE LK K Sbjct: 250 RP----IGLIFTPTRELAHQVTDHLREVGALLVKRNPYSIMCLTGGLSIQKQERLLKYKG 305 Query: 398 KPIIVVGT 421 +VV T Sbjct: 306 SARVVVAT 313
>DBP7_CANGA (Q8TFL3) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)| Length = 715 Score = 62.4 bits (150), Expect = 4e-10 Identities = 46/126 (36%), Positives = 65/126 (51%), Gaps = 3/126 (2%) Frame = +2 Query: 53 NKEGLTSPTEVQSASIPVISQRHDAV---IQSYTGSGKTLAYLLPILSEIGPLKRAREQG 223 NK + T +Q IP I Q D I + TGSGKTLAYLLPI S I + Sbjct: 142 NKMRIQKSTSIQKVVIPQILQNADKTDFFIHAQTGSGKTLAYLLPIFSAILGM-----GD 196 Query: 224 NSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKP 403 + +++SG A+++AP+REL QI V +L LV L+ G R + E+A + Sbjct: 197 HIDRKSGCFALIIAPTRELASQIY-HVTTMLANCCHYLVPCLLIGGERKKSEKARLRKGC 255 Query: 404 IIVVGT 421 ++GT Sbjct: 256 NFIIGT 261
>PRP28_DEBHA (Q6BLU9) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 580 Score = 62.0 bits (149), Expect = 5e-10 Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 6/123 (4%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGP------LKRAREQG 223 G SPT +Q ASIP+ D V + TGSGKTLA+LLP+ S I L +++ Sbjct: 174 GYDSPTPIQRASIPLALNGRDIVGIAETGSGKTLAFLLPLFSYILSVDSNYLLYEHQQES 233 Query: 224 NSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKP 403 N K G+ ++AP+REL +QI +E K+ G V ++GG +++ Sbjct: 234 NFNKPLGL---ILAPTRELALQITKEA-KLFGDKLNLNVVTIIGGHQYEETVHSVRNGVH 289 Query: 404 IIV 412 I+V Sbjct: 290 IVV 292
>ROK1_ASPOR (Q2UQW3) ATP-dependent RNA helicase rok1 (EC 3.6.1.-)| Length = 725 Score = 62.0 bits (149), Expect = 5e-10 Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 13/104 (12%) Frame = +2 Query: 44 DRLNKEGLTSPTEVQSASIPVI-------------SQRHDAVIQSYTGSGKTLAYLLPIL 184 + + ++G T PTEVQ ++P++ D ++ + TGSGKTL++L+P++ Sbjct: 192 ENITEQGFTVPTEVQLGTLPLLLGDRTIGQSKTEEPVEPDLLVVAPTGSGKTLSFLIPVI 251 Query: 185 SEIGPLKRAREQGNSEKRSGIEAVVVAPSRELGMQIVREVEKIL 316 ++I R ++ GI AVVVAP++EL QIV E K++ Sbjct: 252 NKI-----VRHHHGQQEERGIFAVVVAPTKELASQIVNEGRKLV 290
>MAK5_YEAST (P38112) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-) (Maintenance| of killer protein 5) Length = 773 Score = 62.0 bits (149), Expect = 5e-10 Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 4/120 (3%) Frame = +2 Query: 74 PTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGIEA 253 PTE+Q SIPVI Q D + ++ TGSGKTLAY +PI+ ++ S+K + Sbjct: 194 PTEIQKKSIPVIMQGVDVMGKASTGSGKTLAYGIPIVEKL-------ISNFSQKNKKPIS 246 Query: 254 VVVAPSRELGMQIVREVEKILGP---DDKRLVQQLVGGANRSRQEEALK-KNKPIIVVGT 421 ++ P+REL Q+ ++KI P + + L GG + +Q+ LK N IV+ T Sbjct: 247 LIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLSIQKQQRLLKYDNSGQIVIAT 306
>DRS1_ASHGO (Q75F95) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 734 Score = 62.0 bits (149), Expect = 5e-10 Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 1/121 (0%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G T P+ +Q A+IP+ D + + TGSGKT A+++PI+ R K + Sbjct: 238 GYTKPSPIQGATIPIALLGKDVIAGAVTGSGKTAAFMIPIIE--------RLLYKPAKIA 289 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQL-VGGANRSRQEEALKKNKPIIVVG 418 +V+ P+REL +Q V +V K LG L L VGG N +QE+ALK +P IV+ Sbjct: 290 STRVLVLTPTRELAIQ-VADVGKKLGKFVSGLTFGLAVGGLNLRQQEQALKL-RPDIVIA 347 Query: 419 T 421 T Sbjct: 348 T 348
>HAS1_DEBHA (Q6BH93) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 568 Score = 62.0 bits (149), Expect = 5e-10 Identities = 37/117 (31%), Positives = 65/117 (55%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G + T+VQ+ +IP + D + + TGSGKTLA+L+P + + L+ + R+ Sbjct: 123 GFSKMTQVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLYSLR-------FKPRN 175 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 G VVV+P+REL +QI +++ + ++GGANR ++ E L K +++ Sbjct: 176 GTGVVVVSPTRELALQIFGVARELMA-HHSQTFGIVIGGANRRQEAEKLMKGVNLLI 231
>DRS1_YARLI (Q6CEB8) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 753 Score = 62.0 bits (149), Expect = 5e-10 Identities = 41/120 (34%), Positives = 61/120 (50%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G +PT +QS +IP+ D V + TGSGKT AY++P+L R S K + Sbjct: 271 GYQAPTPIQSRTIPIALMGKDLVAGAVTGSGKTAAYIIPVLE--------RLLYKSSKVA 322 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 + VV+ P+REL +Q+ +K+ VGG N QE+ L K +P +V+ T Sbjct: 323 ATKVVVLTPTRELSIQVADVGKKLAQYVSGVRFGLAVGGLNLRVQEQEL-KTRPEVVIAT 381
>SPB4_CRYNE (Q5KCY8) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 748 Score = 61.6 bits (148), Expect = 7e-10 Identities = 33/84 (39%), Positives = 50/84 (59%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 +D +N G + T VQ+ +IP + D V+++ TGSGKTLA+ +P+ L+R + Sbjct: 27 LDVINSMGFKNMTPVQAGTIPRAVKNQDCVVEAVTGSGKTLAFTIPV------LERLSRR 80 Query: 221 GNSEKRSGIEAVVVAPSRELGMQI 292 K+ I A+VVAP+REL QI Sbjct: 81 EEPYKKGEIAAIVVAPTRELATQI 104
>PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1186 Score = 61.6 bits (148), Expect = 7e-10 Identities = 40/124 (32%), Positives = 66/124 (53%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 +D +++ G ++PT +Q+ +IP I D + + TGSGKT+A+L+P+ I ++Q Sbjct: 566 LDVIDRLGYSAPTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHI------KDQ 619 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 E G +++ P+REL QI ++ + L + R V GGA Q LK+ Sbjct: 620 RPLENMEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAV-CAYGGAPIKDQIADLKRGA 678 Query: 401 PIIV 412 IIV Sbjct: 679 EIIV 682
>DBP8_ASPFU (Q4WXW1) ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)| Length = 526 Score = 61.6 bits (148), Expect = 7e-10 Identities = 40/127 (31%), Positives = 62/127 (48%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 + L + PT +Q A IP I + D + S TGSGKT+A+ +P+L Q Sbjct: 108 VGSLTTMAVRKPTAIQKACIPEILKGRDCIGGSRTGSGKTIAFSVPML-----------Q 156 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 +E GI VV+ P+REL +QI +++ I P + V L+ G R + + Sbjct: 157 KWAEDPFGIFGVVLTPTRELALQIFEQIKAISAPQSMKPV--LITGGTDMRPQAIALAGR 214 Query: 401 PIIVVGT 421 P +V+ T Sbjct: 215 PHVVIAT 221
>MAK5_SCHPO (O74393) ATP-dependent RNA helicase mak5 (EC 3.6.1.-)| Length = 648 Score = 61.6 bits (148), Expect = 7e-10 Identities = 44/124 (35%), Positives = 65/124 (52%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L+K G + P +QS IP S D + ++ TGSGKTLA+ +PIL A+ Sbjct: 137 LSKAGFSKPMPIQSLVIPEASIGFDIIGKADTGSGKTLAFGIPILEHCLRNVDAKY---- 192 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 ++A+VVAP+REL QI + E ++ P V + GG +Q+ L K+ P + Sbjct: 193 -----VQALVVAPTRELAHQICQHFE-LIKPSPNIRVMSITGGLAVQKQQRLLNKH-PHV 245 Query: 410 VVGT 421 VV T Sbjct: 246 VVAT 249
>DBP4_YEAST (P20448) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-) (DEAD box| protein 4) (Helicase CA4) (Helicase UF1) Length = 770 Score = 61.6 bits (148), Expect = 7e-10 Identities = 42/124 (33%), Positives = 68/124 (54%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L + TE+Q+ SIPV Q HD + + TGSGKTLA+L+P++ K RE+ Sbjct: 56 LRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIE-----KLYREKWT- 109 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + G+ A++++P+REL MQI + KI G ++GG + + E + + I Sbjct: 110 -EFDGLGALIISPTRELAMQIYEVLTKI-GSHTSFSAGLVIGGKDVKFELERISRIN--I 165 Query: 410 VVGT 421 ++GT Sbjct: 166 LIGT 169
>DBP10_USTMA (Q4P3W3) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 1154 Score = 61.6 bits (148), Expect = 7e-10 Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 13/133 (9%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQR--HDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEK 235 G T+PT +Q +IP I + D V + TGSGKTLAYL+P+++ R G Sbjct: 163 GFTTPTPIQRQAIPAIMSQPPRDVVGMARTGSGKTLAYLIPLIN--------RLNGRHSP 214 Query: 236 RSGIEAVVVAPSRELGMQIVREVEKIL---------GPDDK--RLVQQLVGGANRSRQEE 382 GI+++++ PSREL +QI+R ++I G D + + ++ G ++ Sbjct: 215 TFGIKSLILCPSRELAVQILRVGKEIARGWKADAGEGQDSRGEAIRWAIIVGGESLDEQF 274 Query: 383 ALKKNKPIIVVGT 421 + N P +V+ T Sbjct: 275 GIMSNNPDVVIAT 287
>DBP7_DEBHA (Q6BKH3) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)| Length = 798 Score = 61.6 bits (148), Expect = 7e-10 Identities = 36/115 (31%), Positives = 68/115 (59%), Gaps = 1/115 (0%) Frame = +2 Query: 71 SPTEVQSASIP-VISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGI 247 +PT+VQ + IP +I+ + D +++ TGSGKTL++LLPI ++ + E+ + SG+ Sbjct: 184 APTKVQRSVIPSLIATQRDLFVKAQTGSGKTLSFLLPIFHKL----MSEEKYKITRESGL 239 Query: 248 EAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 A+++ P+REL QI +E ++ + ++GG + ++ L+K I+V Sbjct: 240 FAIILVPTRELCTQIYGVLETLVRCHHHIVPGIVIGGEKKKSEKARLRKGVNILV 294
>PRP11_SCHPO (Q9P7C7) Pre-mRNA-processing ATP-dependent RNA helicase prp11 (EC| 3.6.1.-) Length = 1014 Score = 61.6 bits (148), Expect = 7e-10 Identities = 42/124 (33%), Positives = 64/124 (51%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 I +N G PT +Q+ +IP I+ D + + TGSGKT+A+LLP+ I ++Q Sbjct: 430 ISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHI------KDQ 483 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + G A+++ P+REL +QI RE + L + R GGA Q LK+ Sbjct: 484 RPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRAC-CAYGGAPIKDQIADLKRGA 542 Query: 401 PIIV 412 I+V Sbjct: 543 EIVV 546
>DBP7_YEAST (P36120) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-) (DEAD box| protein 7) Length = 742 Score = 61.6 bits (148), Expect = 7e-10 Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 3/122 (2%) Frame = +2 Query: 56 KEGLTSPTEVQSASIPVI---SQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGN 226 K + PT +Q +IP I + ++D I + TGSGKTL+YLLPI+S I + Sbjct: 161 KMRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTI-----LNMDTH 215 Query: 227 SEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPI 406 ++ SG A+V+AP+REL QI ++ + L+GG + ++ L+K Sbjct: 216 VDRTSGAFALVIAPTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNF 275 Query: 407 IV 412 I+ Sbjct: 276 II 277
>DBP9_KLULA (Q6CUI6) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 594 Score = 61.2 bits (147), Expect = 9e-10 Identities = 33/86 (38%), Positives = 56/86 (65%), Gaps = 1/86 (1%) Frame = +2 Query: 62 GLTSPTEVQSASIPV-ISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKR 238 G PT +QS++IP+ + ++ D + ++ TGSGKTLAYL+P++ I K+A +Q + Sbjct: 34 GFKHPTLIQSSAIPLALQEKRDIIAKASTGSGKTLAYLIPVIQTILDHKKA-DQNDEGAT 92 Query: 239 SGIEAVVVAPSRELGMQIVREVEKIL 316 G V++ P+REL Q++ VEK++ Sbjct: 93 LG---VILVPTRELAQQVLEVVEKLI 115
>HE64_TRYBB (Q26696) Putative DEAD-box RNA helicase HEL64 (EC 3.6.1.-)| Length = 568 Score = 61.2 bits (147), Expect = 9e-10 Identities = 42/124 (33%), Positives = 64/124 (51%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 + +L + T+PT VQ+ S PV+ D V + TGSGKTL +++P L+ I + R Sbjct: 114 LKKLTAQNFTAPTPVQAQSWPVLLSGRDLVGVAKTGSGKTLGFMVPALAHIAVQEPLR-- 171 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 G VV+AP+REL QI E +K++ D + GGA + Q L++ Sbjct: 172 ----SGDGPMVVVLAPTRELAQQIEEETKKVIPGD--VYCGCVYGGAPKGPQLGLLRRGV 225 Query: 401 PIIV 412 I+V Sbjct: 226 HILV 229
>DBP10_ASPOR (Q2UHC1) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 929 Score = 61.2 bits (147), Expect = 9e-10 Identities = 36/122 (29%), Positives = 68/122 (55%), Gaps = 1/122 (0%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 + ++G + PT +Q +IPVI D V + TGSGKT A+++P++ ++ + Sbjct: 104 ITRKGFSVPTPIQRKTIPVIMDGQDVVGMARTGSGKTAAFVIPMIEKL---------KSH 154 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKI-LGPDDKRLVQQLVGGANRSRQEEALKKNKPI 406 + G ++++PSREL +Q ++ V+++ G D K ++ LVGG + Q + N I Sbjct: 155 STKVGARGLILSPSRELALQTLKVVKELGKGTDLKSVL--LVGGDSLEEQFSLMAGNPDI 212 Query: 407 IV 412 ++ Sbjct: 213 VI 214
>Y425_MYCGE (P47664) Probable ATP-dependent RNA helicase MG425 (EC 3.6.1.-)| Length = 449 Score = 61.2 bits (147), Expect = 9e-10 Identities = 42/127 (33%), Positives = 67/127 (52%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 I+ LN + PT++Q SIP + ++ S TG+GKT A+ +PI+ ++ LK Sbjct: 15 IETLNALHINKPTKIQQISIPQFLSEKNLIVHSPTGTGKTAAFAIPIIEKL--LK----- 67 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 E ++ +V+AP+REL QI I R++ L+GG +Q + +K N Sbjct: 68 ---EDQTAKPTLVIAPTRELVEQIKTTFSNIAKNKKLRII-SLIGGVPAWKQIKKIKTN- 122 Query: 401 PIIVVGT 421 P I+VGT Sbjct: 123 PQIIVGT 129
>PIT_DROME (Q9VD51) Probable ATP-dependent RNA helicase pitchoune (EC 3.6.1.-)| Length = 680 Score = 61.2 bits (147), Expect = 9e-10 Identities = 38/121 (31%), Positives = 65/121 (53%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 + + G T TE+QS S+ + + D V + TGSGKTLA+L+P + I L+ Sbjct: 202 IKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLR-------F 254 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 R+G ++++P+REL MQ +++++ ++GG+NR + E L K I+ Sbjct: 255 MPRNGTGVIIISPTRELSMQTFGVLKELMA-HHHHTYGLVMGGSNRQVESEKLGKGINIL 313 Query: 410 V 412 V Sbjct: 314 V 314
>HAS1_SCHPO (Q09916) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 578 Score = 61.2 bits (147), Expect = 9e-10 Identities = 37/121 (30%), Positives = 66/121 (54%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 + + G + TE+Q SIP + D + + TGSGKTLA+L+P + + LK Sbjct: 104 IKEMGFETMTEIQKRSIPPLLAGRDVLGAAKTGSGKTLAFLIPTIEMLYALK-------F 156 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + R+G ++++P+REL +QI +++L + ++GGANR + + L K ++ Sbjct: 157 KPRNGTGVIIISPTRELALQIFGVAKELL-KYHHQTFGIVIGGANRRAEADKLVKGVNLL 215 Query: 410 V 412 V Sbjct: 216 V 216
>DBP3_GIBZE (Q4IJH1) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 581 Score = 61.2 bits (147), Expect = 9e-10 Identities = 40/114 (35%), Positives = 58/114 (50%) Frame = +2 Query: 71 SPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGIE 250 +PT +QSAS P D + + TGSGKT+A+ LP + I LK + Sbjct: 183 APTPIQSASWPFTLSGRDVIGVAETGSGKTMAFALPCVEAISALKHKH----------TK 232 Query: 251 AVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 AVVV+P+REL MQ ++ + + + V L GGA++ Q L + IIV Sbjct: 233 AVVVSPTRELAMQTYEQMASVAALNRMKCV-CLYGGASKDDQRNLLNRGADIIV 285
>DBP3_ASPOR (Q2UMH8) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 498 Score = 61.2 bits (147), Expect = 9e-10 Identities = 41/107 (38%), Positives = 59/107 (55%) Frame = +2 Query: 71 SPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGIE 250 SPT +QSA+ P++ D + + TGSGKTLA+ LP L +I + +K Sbjct: 102 SPTSIQSATWPLLFAGRDVIGIAETGSGKTLAFGLPCLKKIQDSAMTK-----QKPYRPL 156 Query: 251 AVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALK 391 AV+++P+REL MQI ++ K G R V + GG + Q EALK Sbjct: 157 AVIISPTRELAMQIYDQLLKFSGSVGVR-VACVFGGVRKEEQREALK 202
>HAS1_ASPFU (Q4WQM4) ATP-dependent RNA helicase has1 (EC 3.6.1.-)| Length = 622 Score = 60.8 bits (146), Expect = 1e-09 Identities = 38/121 (31%), Positives = 65/121 (53%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 +N G + TE+Q +IP + D + + TGSGKTL++L+P + + L+ Sbjct: 155 INDMGFETMTEIQRRTIPPLLAGRDVLGAAKTGSGKTLSFLIPAVEMLSALR-------F 207 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + R+G +VV+P+REL +QI V + L + ++GGANR + E L K ++ Sbjct: 208 KPRNGTGVIVVSPTRELALQIF-GVARELCQYHSQTYGIVIGGANRRAEAEKLMKGVNLL 266 Query: 410 V 412 + Sbjct: 267 I 267
>MS116_YEAST (P15424) ATP-dependent RNA helicase MSS116, mitochondrial precursor| (EC 3.6.1.-) Length = 664 Score = 60.8 bits (146), Expect = 1e-09 Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 3/130 (2%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 I R+ GLT P + ++ + S+ HD + ++ TG+GKT A+L+PI + K Sbjct: 121 ITRMEFPGLT-PVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTK----- 174 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPD---DKRLVQQLVGGANRSRQEEALK 391 + + ++AV+VAP+R+L +QI EV+KI + K LVGG + + Sbjct: 175 --FDSQYMVKAVIVAPTRDLALQIEAEVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMN 232 Query: 392 KNKPIIVVGT 421 K +P IV+ T Sbjct: 233 KLRPNIVIAT 242
>DBP10_YEAST (Q12389) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-) (DEAD box| protein 10) Length = 995 Score = 60.8 bits (146), Expect = 1e-09 Identities = 35/127 (27%), Positives = 65/127 (51%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ + ++G PT +Q +IP+I Q D V + TGSGKT A++LP++ ++ Sbjct: 149 LNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVEKL--------- 199 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + + G AV+++PSREL MQ + + R V L+ G + ++ + Sbjct: 200 KSHSGKIGARAVILSPSRELAMQTFNVFKDFARGTELRSV--LLTGGDSLEEQFGMMMTN 257 Query: 401 PIIVVGT 421 P +++ T Sbjct: 258 PDVIIAT 264
>DBP8_GIBZE (Q4I662) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 547 Score = 60.8 bits (146), Expect = 1e-09 Identities = 40/127 (31%), Positives = 62/127 (48%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 + L + PT +Q IP I + D + S TGSGKT+A+ +PIL Q Sbjct: 128 VQSLENMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTMAFAVPIL-----------Q 176 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 SE + I AVV+ P+REL +QI + + I P + + LV G + R + + Sbjct: 177 KWSEDPTAIFAVVLTPTRELALQIFEQFKAISSPQSLKAI--LVTGGSDMRTQAIEIGKR 234 Query: 401 PIIVVGT 421 P +++ T Sbjct: 235 PHVIIAT 241
>PRP28_CANAL (Q59W52) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 581 Score = 60.8 bits (146), Expect = 1e-09 Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 1/88 (1%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 +++ G PT VQ ASIP+ ++ D V + TGSGKTLA+L+P+L+ I L Sbjct: 183 ISQLGYEEPTSVQRASIPLALKKRDVVGVAETGSGKTLAFLIPVLNYI--LSIDENYLKY 240 Query: 230 EKRSGIE-AVVVAPSRELGMQIVREVEK 310 EK S +++AP+REL +QI +E EK Sbjct: 241 EKISNEPVGLILAPTRELALQITKEAEK 268
>DBP10_ASPFU (Q8NJM2) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 869 Score = 60.8 bits (146), Expect = 1e-09 Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 1/120 (0%) Frame = +2 Query: 56 KEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEK 235 ++G + PT +Q +IPVI D V + TGSGKT A+++P++ ++ + Sbjct: 87 RKGFSVPTPIQRKTIPVIMDDQDVVGMARTGSGKTAAFVIPMIEKL---------KSHST 137 Query: 236 RSGIEAVVVAPSRELGMQIVREVEKI-LGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 + G +V++PSREL +Q ++ V+++ G D K ++ LVGG + Q + N II+ Sbjct: 138 KVGARGLVLSPSRELALQTLKVVKELGRGTDLKSVL--LVGGDSLEEQFAMIAGNPDIII 195
>MAK5_KLULA (Q6CTN7) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-)| Length = 796 Score = 60.5 bits (145), Expect = 2e-09 Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 3/113 (2%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G T PTE+Q SIP+ + H+ + ++ TGSGKTLAY +PI+ ++ + S RS Sbjct: 238 GFTRPTEIQLKSIPLALKGHNIMGKASTGSGKTLAYGIPIIEQL-------IKDTSNDRS 290 Query: 242 GIEAVVVAPSRELGMQIVREVEKI---LGPDDKRLVQQLVGGANRSRQEEALK 391 ++ P+REL Q+ ++K+ + +K + L GG + +QE LK Sbjct: 291 --IGLIFTPTRELAHQVTDHLQKVWTKMNKLNKYTILSLTGGLSIQKQERILK 341
>DB10_NICSY (P46942) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-)| Length = 607 Score = 60.5 bits (145), Expect = 2e-09 Identities = 39/124 (31%), Positives = 61/124 (49%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 + +++ G ++PT +Q+ S P+ Q D V + TGSGKTL YL+P + +Q Sbjct: 157 VREMHQAGFSAPTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLMPAFIHL-------QQ 209 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + G +V++P+REL QI E K G + L GGA + Q L + Sbjct: 210 RRKNPQLGPTILVLSPTRELATQIQAEAVK-FGKSSRISCTCLYGGAPKGPQLRELSRGV 268 Query: 401 PIIV 412 I+V Sbjct: 269 DIVV 272
>SRMB_ECOLI (P21507) ATP-dependent RNA helicase srmB (EC 3.6.1.-)| Length = 444 Score = 60.5 bits (145), Expect = 2e-09 Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 4/131 (3%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ L +G T PT +Q+A+IP D + + TG+GKT AYLLP L + R Sbjct: 16 LEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQHLLDFPR---- 71 Query: 221 GNSEKRSGIEAV-VVAPSRELGMQI---VREVEKILGPDDKRLVQQLVGGANRSRQEEAL 388 K+SG + ++ P+REL MQ+ RE+ K D + + GG E Sbjct: 72 ----KKSGPPRILILTPTRELAMQVSDHARELAKHTHLD----IATITGGVAYMNHAEVF 123 Query: 389 KKNKPIIVVGT 421 +N+ I+V T Sbjct: 124 SENQDIVVATT 134
>SPB4_EMENI (Q5B8F4) ATP-dependent rRNA helicase spb4 (EC 3.6.1.-)| Length = 638 Score = 60.5 bits (145), Expect = 2e-09 Identities = 30/92 (32%), Positives = 56/92 (60%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 +D ++ G T T VQ+++IP+ D V+++ TGSGKTL++L+P++ ++ L+ Sbjct: 26 LDAVSSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIPVVEKLLRLE----- 80 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKIL 316 K+ + A++V+P+REL QI + +L Sbjct: 81 -EPIKKHHVGAIIVSPTRELASQIYNVLTSLL 111
>DBP10_EMENI (Q5BFU7) ATP-dependent RNA helicase dbp10 (EC 3.6.1.-)| Length = 936 Score = 60.5 bits (145), Expect = 2e-09 Identities = 36/120 (30%), Positives = 68/120 (56%), Gaps = 1/120 (0%) Frame = +2 Query: 56 KEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEK 235 ++G + PT +Q +IPVI + D V + TGSGKT A+++P++ ++ + Sbjct: 108 RKGFSVPTPIQRKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEKL---------KSHST 158 Query: 236 RSGIEAVVVAPSRELGMQIVREVEKI-LGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 + G ++++PSREL +Q ++ V+++ G D K ++ LVGG + Q + N I++ Sbjct: 159 KFGARGLILSPSRELALQTLKVVKELGKGTDLKSVL--LVGGDSLEEQFGMMAGNPDIVI 216
>DDX54_MOUSE (Q8K4L0) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box| protein 54) Length = 874 Score = 60.1 bits (144), Expect = 2e-09 Identities = 40/119 (33%), Positives = 62/119 (52%) Frame = +2 Query: 56 KEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEK 235 K+G PT +Q +IPVI D V + TGSGKT +LLP+ + +AR Sbjct: 112 KKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERL----KAR-----SA 162 Query: 236 RSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 ++G A++++P+REL +Q ++ K LG ++GG Q AL +N II+ Sbjct: 163 QTGARALILSPTRELALQTMK-FTKELGKFTGLKTALILGGDKMEDQFAALHENPDIII 220
>DBPA_BACSU (P42305) ATP-dependent RNA helicase dbpA (EC 3.6.1.-)| Length = 479 Score = 60.1 bits (144), Expect = 2e-09 Identities = 40/120 (33%), Positives = 65/120 (54%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G T PT+VQ + IP +R D V++S TGSGKT ++ +P+ E N ++ Sbjct: 21 GYTEPTKVQQSVIPAALERKDLVVKSQTGSGKTASFGIPLC----------ELANWDENK 70 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 +A+++ P+REL +Q+ ++ I KR+ V G + +++A K K IVVGT Sbjct: 71 P-QALILTPTRELAVQVKEDITNI--GRFKRIKATAVFGKSSFDKQKAELKQKSHIVVGT 127
>DBP10_ASHGO (Q757U8) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 960 Score = 60.1 bits (144), Expect = 2e-09 Identities = 36/124 (29%), Positives = 64/124 (51%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 + ++++G PT +Q +IP+I Q+ D V + TGSGKT A++LP++ ++ Sbjct: 132 LGNISRKGFRQPTPIQRKTIPLILQQRDIVGMARTGSGKTAAFVLPLIEKL--------- 182 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + G A++++PSREL MQ + ++ + R V L GG Q + N Sbjct: 183 KMHSAKIGARAMILSPSRELAMQTHKVFKEFAKGSNLRSV-LLTGGDGLEDQFSMMMSNP 241 Query: 401 PIIV 412 +I+ Sbjct: 242 DVII 245
>PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 974 Score = 60.1 bits (144), Expect = 2e-09 Identities = 44/125 (35%), Positives = 64/125 (51%), Gaps = 4/125 (3%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 LN PT +Q+ +IP + D + + TGSGKTLA+LLP+L I R + ++ Sbjct: 393 LNDLRYDKPTSIQAQAIPAVMSGRDVISVAKTGSGKTLAFLLPMLRHI--KHRVGVETHT 450 Query: 230 EKRSGIEA----VVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKN 397 SG + V++ P+REL +QI R++ L + V GG+ Q ALKK Sbjct: 451 TTLSGASSHPLGVIITPTRELCVQIYRDLRPFLAALELTAV-CAYGGSPIKDQIAALKKG 509 Query: 398 KPIIV 412 IIV Sbjct: 510 THIIV 514
>ROK1_EMENI (Q5BET6) ATP-dependent RNA helicase rok1 (EC 3.6.1.-)| Length = 742 Score = 60.1 bits (144), Expect = 2e-09 Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 15/105 (14%) Frame = +2 Query: 44 DRLNKEGLTSPTEVQSASIPVI---------------SQRHDAVIQSYTGSGKTLAYLLP 178 + + ++G T PTEVQ S+P++ + D ++ + TGSGKTL++++P Sbjct: 202 ENIAEQGFTVPTEVQLGSLPLLLGNSAVPGGSSDSTSATEPDLLVVAPTGSGKTLSFMIP 261 Query: 179 ILSEIGPLKRAREQGNSEKRSGIEAVVVAPSRELGMQIVREVEKI 313 ++++I R + GI AVVVAP++EL QIV E K+ Sbjct: 262 VINKI-----VRHHHTHPEERGIFAVVVAPTKELASQIVNEGRKL 301
>PRP5_EMENI (Q5BDW4) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1173 Score = 60.1 bits (144), Expect = 2e-09 Identities = 41/124 (33%), Positives = 64/124 (51%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 +D ++K G S T +Q+ +IP I D + + TGSGKT+A+L+P+ I ++Q Sbjct: 553 LDVIDKLGFASLTSIQAQAIPAIMSGRDVIGVAKTGSGKTMAFLIPMFRHI------KDQ 606 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 E G +++ P+REL QI ++ + L + R V GGA Q LK+ Sbjct: 607 RPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAV-CAYGGAPIKDQIAELKRGA 665 Query: 401 PIIV 412 IIV Sbjct: 666 EIIV 669
>RRP3_ASPOR (Q2UNB7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 59.7 bits (143), Expect = 3e-09 Identities = 46/120 (38%), Positives = 61/120 (50%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G +PT +Q+ +IP+ Q D + + TGSGKT A+ LPIL Q +K S Sbjct: 71 GYKAPTAIQAEAIPLALQGRDLIGLAETGSGKTAAFALPIL-----------QALMDKPS 119 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 +V+AP+REL QI + E LG LVGG + Q AL K KP I+V T Sbjct: 120 SFFGLVLAPTRELAYQISQAFEG-LGSTISVRSTVLVGGMDMVSQSIALGK-KPHIIVAT 177
>RRP3_ASPFU (Q4WJE9) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 59.7 bits (143), Expect = 3e-09 Identities = 44/120 (36%), Positives = 59/120 (49%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G +PT +Q+ SIP+ Q D + + TGSGKT A+ LPIL Q E Sbjct: 71 GYKAPTPIQAESIPLALQGRDLIGLAETGSGKTAAFALPIL-----------QALMENPQ 119 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 +++AP+REL QI + E LG +VGG + Q AL K KP I+V T Sbjct: 120 SFFGLILAPTRELAFQISKSFES-LGSTINVRCAVIVGGMDMVSQSIALGK-KPHIIVAT 177
>DBP9_DEBHA (Q6BLM5) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 586 Score = 59.7 bits (143), Expect = 3e-09 Identities = 38/128 (29%), Positives = 73/128 (57%), Gaps = 1/128 (0%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPV-ISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRARE 217 + +++ G +PT +QS++IP+ I ++ D + ++ TGSGKT AY +PI+ + Sbjct: 33 LQAIDQLGFENPTLIQSSAIPLAIEEKRDIIAKASTGSGKTAAYSIPIIQNL-------L 85 Query: 218 QGNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKN 397 Q S +R I+++++ P+REL Q+ + +EK+L + ++ + + +L N Sbjct: 86 QDESTERE-IKSIILVPTRELSNQVSQFLEKLLIFCNSKIRLINISSNLSDQVINSLLIN 144 Query: 398 KPIIVVGT 421 KP I+V T Sbjct: 145 KPEIIVST 152
>DDX43_HUMAN (Q9NXZ2) Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)| (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen) Length = 648 Score = 59.7 bits (143), Expect = 3e-09 Identities = 39/124 (31%), Positives = 63/124 (50%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ + K G PT +QS + P++ Q D + + TG+GKTL YL+P G + + Sbjct: 254 MENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMP-----GFIHLVLQP 308 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 +R+ +V+ P+REL +Q+ E K + + + GG NR Q E LKK Sbjct: 309 SLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKGLRSVC--VYGGGNRDEQIEELKKGV 366 Query: 401 PIIV 412 II+ Sbjct: 367 DIII 370
>DBP8_YEAST (P38719) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-) (DEAD box| protein 8) Length = 431 Score = 59.7 bits (143), Expect = 3e-09 Identities = 42/119 (35%), Positives = 63/119 (52%) Frame = +2 Query: 65 LTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSG 244 +T PT +Q A IP I + D + + TGSGKT+A+ P+L++ SE SG Sbjct: 22 ITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGPMLTKW-----------SEDPSG 70 Query: 245 IEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 + VV+ P+REL MQI + LG V +VGG + +Q L++ KP ++ T Sbjct: 71 MFGVVLTPTRELAMQIAEQF-TALGSSMNIRVSVIVGGESIVQQALDLQR-KPHFIIAT 127
>DBP4_KLULA (Q6CRF4) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 770 Score = 59.7 bits (143), Expect = 3e-09 Identities = 39/115 (33%), Positives = 66/115 (57%) Frame = +2 Query: 77 TEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGIEAV 256 TE+Q SIP+ + HD + + TGSGKTLA+L+P++ K RE+ G+ A+ Sbjct: 65 TEIQRESIPLSLKGHDVLGAAKTGSGKTLAFLIPVIE-----KLYREKWTD--MDGLGAL 117 Query: 257 VVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 +++P+REL MQI + KI G ++GG + + ++E + + I++GT Sbjct: 118 IISPTRELAMQIYEVLSKI-GKHTTFSAGLVIGGKDVTFEKERISRIN--ILIGT 169
>MAK5_CRYNE (Q5KC99) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-)| Length = 772 Score = 59.7 bits (143), Expect = 3e-09 Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 16/131 (12%) Frame = +2 Query: 68 TSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGI 247 T+PT +QS +IP D V + TGSGKTLAY LPIL + G + ++GI Sbjct: 193 TAPTAIQSRAIPAGITGRDVVGVAETGSGKTLAYSLPILHYL--------LGQRKSKAGI 244 Query: 248 E----AVVVAPSRELGMQIVREVEKIL-----GPDDKR-------LVQQLVGGANRSRQE 379 + A+V+ P+REL +Q++ + +L PD ++ V +VGG + +Q+ Sbjct: 245 KRPLSALVLCPTRELALQVMDHLNALLKHALATPDGEKPQGPPRVSVGSVVGGLSAQKQK 304 Query: 380 EALKKNKPIIV 412 L++ +IV Sbjct: 305 RILERGCDVIV 315
>DBP9_USTMA (Q4P7M1) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 686 Score = 59.3 bits (142), Expect = 4e-09 Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 2/122 (1%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G PT +Q +IP+ D + ++ TGSGKTLAY LP+L ++ K A + ++ + Sbjct: 78 GYGIPTPIQQKAIPLALAGKDILARARTGSGKTLAYGLPLLQKVLDAKSAVAKSDANHQL 137 Query: 242 GIEAVVVAPSRELGMQIVREVEKILG--PDDKRLVQQLVGGANRSRQEEALKKNKPIIVV 415 A+V+ P+REL Q+ R + ++ DD RLV V + + L KP +V+ Sbjct: 138 -TRALVLVPTRELAEQVFRHLSVVIEYVRDDIRLVN--VAREASEKVQRLLLSEKPDVVI 194 Query: 416 GT 421 T Sbjct: 195 AT 196
>DDX39_HUMAN (O00148) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) (Nuclear RNA helicase URH49) Length = 427 Score = 59.3 bits (142), Expect = 4e-09 Identities = 39/120 (32%), Positives = 56/120 (46%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G P+EVQ IP D + Q+ +G GKT ++L L +I P+ Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPV-----------NG 111 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 + +V+ +REL QI +E E+ V GG + + EE LKKN P +VVGT Sbjct: 112 QVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGT 171
>DRS1_ASPFU (Q4WRV2) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 830 Score = 59.3 bits (142), Expect = 4e-09 Identities = 41/115 (35%), Positives = 58/115 (50%) Frame = +2 Query: 68 TSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGI 247 T+PT +Q +IPV D V + TGSGKT A+++PIL + L R R+ S Sbjct: 331 TTPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERL--LFRPRKVPTS------ 382 Query: 248 EAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 ++ P+REL +Q K+ D QLVGG + QE LKK +I+ Sbjct: 383 RVAILMPTRELAVQCYNVATKLATHTDITFC-QLVGGFSLREQENILKKRPDVII 436
>SPB4_ASPFU (Q4WYJ7) ATP-dependent rRNA helicase spb4 (EC 3.6.1.-)| Length = 640 Score = 59.3 bits (142), Expect = 4e-09 Identities = 28/92 (30%), Positives = 56/92 (60%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ ++ G T T VQ+++IP+ D V+++ TGSGKTL++L+P++ ++ L+ Sbjct: 26 LEAMSSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIPVVEKLLRLE----- 80 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKIL 316 K+ + A++++P+REL QI + +L Sbjct: 81 -EPIKKHHVGAIIISPTRELASQIYNVLSSLL 111
>HAS1_CRYNE (Q5KMN6) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 607 Score = 58.9 bits (141), Expect = 5e-09 Identities = 38/121 (31%), Positives = 65/121 (53%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 + + G + TEVQ+ +IP + D + + TGSGKT+A+L+P + + L+ Sbjct: 144 IERMGFETMTEVQARTIPPLLAGKDVLGAARTGSGKTMAFLIPSVELLSTLR-------F 196 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + +G ++++P+REL +QI V K L + L+GGANR + + L K +I Sbjct: 197 KPVNGTGVIIISPTRELALQIF-GVAKELMQGHSQTFGVLMGGANRKAEADKLVKGVNLI 255 Query: 410 V 412 V Sbjct: 256 V 256
>DDX49_HUMAN (Q9Y6V7) Probable ATP-dependent RNA helicase DDX49 (EC 3.6.1.-)| (DEAD box protein 49) Length = 483 Score = 58.9 bits (141), Expect = 5e-09 Identities = 43/127 (33%), Positives = 65/127 (51%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 +++ + GL PT VQ IP I + D + + TGSGKT A++LPIL ++ Sbjct: 14 VEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKL--------- 64 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 SE GI +V+ P+REL QI + ++LG +VGG + Q L + K Sbjct: 65 --SEDPYGIFCLVLTPTRELAYQIAEQF-RVLGKPLGLKDCIIVGGMDMVAQALELSR-K 120 Query: 401 PIIVVGT 421 P +V+ T Sbjct: 121 PHVVIAT 127
>DDX39_RAT (Q5U216) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) (Nuclear RNA helicase, DECD variant of DEAD box family) Length = 427 Score = 58.9 bits (141), Expect = 5e-09 Identities = 38/120 (31%), Positives = 56/120 (46%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G P+EVQ IP D + Q+ +G GKT ++L L +I P+ Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPI-----------NG 111 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 + +V+ +REL QI +E E+ V GG + + E+ LKKN P +VVGT Sbjct: 112 QVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGT 171
>RRP3_YARLI (Q6CH58) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 480 Score = 58.9 bits (141), Expect = 5e-09 Identities = 43/118 (36%), Positives = 58/118 (49%) Frame = +2 Query: 68 TSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGI 247 T PT +Q+ SIP + D + + TGSGKT A+ +P+L Q E + Sbjct: 85 TKPTPIQAQSIPYALEGRDIIGLAQTGSGKTAAFAIPVL-----------QSLYENPQPL 133 Query: 248 EAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 VV+AP+REL QI E + LG +VGG N Q AL K KP ++V T Sbjct: 134 YCVVLAPTRELAYQI-SETFEALGSAMGLRTAVVVGGMNMMTQAVALSK-KPHVIVAT 189
>DDX54_HUMAN (Q8TDD1) ATP-dependent RNA helicase DDX54 (EC 3.6.1.-) (DEAD box| protein 54) (ATP-dependent RNA helicase DP97) Length = 881 Score = 58.9 bits (141), Expect = 5e-09 Identities = 38/119 (31%), Positives = 59/119 (49%) Frame = +2 Query: 56 KEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEK 235 K+G PT +Q +IPVI D V + TGSGKT +LLP+ + Sbjct: 113 KKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERL---------KTHSA 163 Query: 236 RSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 ++G A++++P+REL +Q ++ K LG ++GG Q AL +N II+ Sbjct: 164 QTGARALILSPTRELALQTLK-FTKELGKFTGLKTALILGGDRMEDQFAALHENPDIII 221
>DDX49_MOUSE (Q4FZF3) Probable ATP-dependent RNA helicase DDX49 (EC 3.6.1.-)| (DEAD box protein 49) Length = 480 Score = 58.9 bits (141), Expect = 5e-09 Identities = 43/127 (33%), Positives = 65/127 (51%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 +++ + GL PT VQ IP I + D + + TGSGKT A++LPIL ++ Sbjct: 14 VEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKL--------- 64 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 SE GI +V+ P+REL QI + ++LG +VGG + Q L + K Sbjct: 65 --SEDPYGIFCLVLTPTRELAYQIAEQF-RVLGKPLGLKDCIIVGGMDMVAQALELSR-K 120 Query: 401 PIIVVGT 421 P +V+ T Sbjct: 121 PHVVIAT 127
>DBP7_CANAL (Q59S50) ATP-dependent RNA helicase DBP7 (EC 3.6.1.-)| Length = 727 Score = 58.9 bits (141), Expect = 5e-09 Identities = 37/114 (32%), Positives = 67/114 (58%), Gaps = 1/114 (0%) Frame = +2 Query: 74 PTEVQSASIP-VISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGIE 250 PT++Q IP +IS +D +++ TGSGKTLA++LPI ++ ++ + + N E SG+ Sbjct: 159 PTKIQQLVIPSLISTENDLFVKAQTGSGKTLAFVLPIFHKL--MRENKFKINRE--SGLF 214 Query: 251 AVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 A+++ P+REL QI +E + + ++GG + ++ L+K I+V Sbjct: 215 AIILTPTRELATQIYGVLETLTRCHHWIVPGIVIGGEKKKSEKARLRKGCNILV 268
>RRP3_NEUCR (Q7RY59) ATP-dependent rRNA helicase rrp-3 (EC 3.6.1.-)| Length = 515 Score = 58.9 bits (141), Expect = 5e-09 Identities = 44/120 (36%), Positives = 62/120 (51%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G +PT +Q SIP+ Q D + + TGSGKT A+ LPIL Q +K + Sbjct: 109 GYKNPTPIQEQSIPLALQNRDIIGIAETGSGKTAAFALPIL-----------QALLDKPA 157 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 + A+V+AP+REL QI + E LG ++GG + Q AL K KP ++V T Sbjct: 158 PLFALVLAPTRELAAQIAQAFE-ALGSLISLRCALILGGMDMVTQAIALGK-KPHVIVAT 215
>RHLB_IDILO (Q5QYF8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 425 Score = 58.5 bits (140), Expect = 6e-09 Identities = 37/124 (29%), Positives = 66/124 (53%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 ++ G T +Q+ S+PV D Q+ TG+GKTLA+LL + + + + + Sbjct: 24 ISSAGFEYCTPIQALSLPVALSNRDVAGQAQTGTGKTLAFLLATFNRL-----MQNESSE 78 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + SG A+++AP+REL +QI + + ++ ++ + GG Q+E L +P I Sbjct: 79 KTESGPRALIMAPTRELAIQIAHDADALIEHCGLKM-GVIYGGEGYEGQKEQLAA-QPDI 136 Query: 410 VVGT 421 +VGT Sbjct: 137 LVGT 140
>DRS1_ASPOR (Q2UQI6) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 820 Score = 58.5 bits (140), Expect = 6e-09 Identities = 41/115 (35%), Positives = 58/115 (50%) Frame = +2 Query: 68 TSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGI 247 T+PT +Q +IPV D V + TGSGKT A+++PIL + L R R+ S Sbjct: 323 TNPTPIQRKTIPVALLGKDIVGSAVTGSGKTAAFVVPILERL--LFRPRKVPTS------ 374 Query: 248 EAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 ++ P+REL +Q K+ D QLVGG + QE LKK +I+ Sbjct: 375 RVAILMPTRELAVQCYNVATKLATYTDITFC-QLVGGFSLREQENILKKRPDVII 428
>DDX39_MOUSE (Q8VDW0) ATP-dependent RNA helicase DDX39 (EC 3.6.1.-) (DEAD box| protein 39) Length = 427 Score = 58.5 bits (140), Expect = 6e-09 Identities = 38/120 (31%), Positives = 56/120 (46%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G P+EVQ IP D + Q+ +G GKT ++L L +I P+ Sbjct: 63 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPV-----------NG 111 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 + +V+ +REL QI +E E+ V GG + + E+ LKKN P +VVGT Sbjct: 112 QVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGT 171
>DBP10_CANGA (Q6FNA2) ATP-dependent RNA helicase DBP10 (EC 3.6.1.-)| Length = 969 Score = 58.5 bits (140), Expect = 6e-09 Identities = 35/124 (28%), Positives = 61/124 (49%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 ++K G PT +Q +IP+I Q D V + TGSGKT A++LP++ ++ Sbjct: 130 ISKRGFRQPTPIQRKTIPLILQNRDIVGMARTGSGKTAAFVLPMIEKL---------KTH 180 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + G A++++PSREL MQ ++ R V L+ G + + + P + Sbjct: 181 SSKIGARAIILSPSRELAMQTHSVFKEFSRGTHLRSV--LLTGGDSLEDQFGMMMTNPDV 238 Query: 410 VVGT 421 ++ T Sbjct: 239 IIAT 242
>UAP56_RAT (Q63413) Spliceosome RNA helicase Bat1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) Length = 428 Score = 58.5 bits (140), Expect = 6e-09 Identities = 39/120 (32%), Positives = 56/120 (46%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G P+EVQ IP D + Q+ +G GKT ++L L ++ P+ Sbjct: 64 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPV-----------TG 112 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 + +V+ +REL QI +E E+ V GG + + EE LKKN P IVVGT Sbjct: 113 QVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGT 172
>UAP56_PONPY (Q5RE47) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 58.5 bits (140), Expect = 6e-09 Identities = 39/120 (32%), Positives = 56/120 (46%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G P+EVQ IP D + Q+ +G GKT ++L L ++ P+ Sbjct: 64 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPV-----------TG 112 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 + +V+ +REL QI +E E+ V GG + + EE LKKN P IVVGT Sbjct: 113 QVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGT 172
>UAP56_PIG (Q29024) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 58.5 bits (140), Expect = 6e-09 Identities = 39/120 (32%), Positives = 56/120 (46%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G P+EVQ IP D + Q+ +G GKT ++L L ++ P+ Sbjct: 64 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPV-----------TG 112 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 + +V+ +REL QI +E E+ V GG + + EE LKKN P IVVGT Sbjct: 113 QVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGT 172
>UAP56_PANTR (P60024) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 58.5 bits (140), Expect = 6e-09 Identities = 39/120 (32%), Positives = 56/120 (46%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G P+EVQ IP D + Q+ +G GKT ++L L ++ P+ Sbjct: 64 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPV-----------TG 112 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 + +V+ +REL QI +E E+ V GG + + EE LKKN P IVVGT Sbjct: 113 QVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGT 172
>UAP56_MOUSE (Q9Z1N5) Spliceosome RNA helicase Bat1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) (HLA-B-associated transcript 1) Length = 428 Score = 58.5 bits (140), Expect = 6e-09 Identities = 39/120 (32%), Positives = 56/120 (46%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G P+EVQ IP D + Q+ +G GKT ++L L ++ P+ Sbjct: 64 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPV-----------TG 112 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 + +V+ +REL QI +E E+ V GG + + EE LKKN P IVVGT Sbjct: 113 QVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGT 172
>UAP56_MACMU (Q5TM17) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 58.5 bits (140), Expect = 6e-09 Identities = 39/120 (32%), Positives = 56/120 (46%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G P+EVQ IP D + Q+ +G GKT ++L L ++ P+ Sbjct: 64 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPV-----------TG 112 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 + +V+ +REL QI +E E+ V GG + + EE LKKN P IVVGT Sbjct: 113 QVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGT 172
>UAP56_HUMAN (Q13838) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) (ATP-dependent RNA helicase p47) (HLA-B-associated transcript-1) Length = 428 Score = 58.5 bits (140), Expect = 6e-09 Identities = 39/120 (32%), Positives = 56/120 (46%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G P+EVQ IP D + Q+ +G GKT ++L L ++ P+ Sbjct: 64 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPV-----------TG 112 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 + +V+ +REL QI +E E+ V GG + + EE LKKN P IVVGT Sbjct: 113 QVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGT 172
>UAP56_CANFA (Q5WR10) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 58.5 bits (140), Expect = 6e-09 Identities = 39/120 (32%), Positives = 56/120 (46%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G P+EVQ IP D + Q+ +G GKT ++L L ++ P+ Sbjct: 64 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPV-----------TG 112 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 + +V+ +REL QI +E E+ V GG + + EE LKKN P IVVGT Sbjct: 113 QVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGT 172
>ROK1_CANAL (Q9Y7C4) ATP-dependent RNA helicase CHR1 (EC 3.6.1.-)| Length = 578 Score = 58.5 bits (140), Expect = 6e-09 Identities = 30/80 (37%), Positives = 47/80 (58%) Frame = +2 Query: 74 PTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGIEA 253 PT +Q SIP+ D + + TGSGKTLA+L+P++ +I N K GI Sbjct: 154 PTPIQCESIPITLNNRDLIACAPTGSGKTLAFLIPLVQQI-------LSKNVSKNHGIRG 206 Query: 254 VVVAPSRELGMQIVREVEKI 313 ++++P+ EL +QI +E+E I Sbjct: 207 LIISPTNELAVQIFQELEII 226
>RHLB_VIBCH (Q9KV52) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 438 Score = 58.5 bits (140), Expect = 6e-09 Identities = 36/124 (29%), Positives = 63/124 (50%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ID L K+G T +Q+ ++PV+ D Q+ TG+GKTLA+L + + A + Sbjct: 21 IDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNHLLTTPAAEGR 80 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 ++ R A+++AP+REL +QI + E +L + GG + +Q L+ Sbjct: 81 AETQPR----AIIMAPTRELAIQIFNDAEPLLASTGLK-AALAYGGESYDKQLAKLQSGV 135 Query: 401 PIIV 412 I++ Sbjct: 136 DILI 139
>DEAD_HAEIN (P44586) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 613 Score = 58.5 bits (140), Expect = 6e-09 Identities = 37/117 (31%), Positives = 60/117 (51%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G +P+ +Q + IP + +D + + TGSGKT A+ LP+L++I P SEK Sbjct: 24 GFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFALPLLAQIDP---------SEKHP 74 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 + +V+AP+REL +Q+ E + + L GG Q ALK+ ++V Sbjct: 75 --QMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGGQRYDIQLRALKQGAQVVV 129
>MAK5_DEBHA (Q6BV58) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-)| Length = 790 Score = 58.2 bits (139), Expect = 8e-09 Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 2/115 (1%) Frame = +2 Query: 74 PTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGIEA 253 PT +Q +IP+ + D + ++ TGSGKTLAY +PIL E K A+ + + + Sbjct: 222 PTAIQKRTIPLAIEGKDVIGKAITGSGKTLAYGIPIL-ERHLQKMAKANQSKKVINPPTG 280 Query: 254 VVVAPSRELGMQIVREVEKI--LGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 ++ AP+REL Q+V + +I P + + + GG + +QE L I+V Sbjct: 281 IIFAPTRELAHQVVDHLNRIAKFTPLSQHGIVSITGGLSIQKQERLLSHGPGIVV 335
>DBP4_NEUCR (Q7RZ35) ATP-dependent RNA helicase dbp-4 (EC 3.6.1.-)| Length = 823 Score = 58.2 bits (139), Expect = 8e-09 Identities = 42/115 (36%), Positives = 69/115 (60%) Frame = +2 Query: 77 TEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGIEAV 256 T+VQ A+IP+ + D + + TGSGKTLA+L+P+L + L RAR + G+ A+ Sbjct: 81 TDVQRAAIPLALKGQDILGAARTGSGKTLAFLVPVLEK---LYRAR----WTEYDGLGAL 133 Query: 257 VVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 +++P+REL +QI + KI G + ++GG +S +EEA + + I+V T Sbjct: 134 IISPTRELAVQIFEVLRKI-GRNHSFSAGLVIGG--KSLKEEAERLGRMNILVCT 185
>SPB4_ASPOR (Q2UBZ5) ATP-dependent rRNA helicase spb4 (EC 3.6.1.-)| Length = 638 Score = 58.2 bits (139), Expect = 8e-09 Identities = 29/92 (31%), Positives = 56/92 (60%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ ++ G T T VQ+++IP+ D V+++ TGSGKTL++L+PI+ ++ L+ Sbjct: 26 LEAVSSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIPIVEKLLRLE----- 80 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKIL 316 K+ + A++++P+REL QI + +L Sbjct: 81 -EPIKKHHVGAIIISPTRELASQIYHVLLSLL 111
>MAK5_GIBZE (Q4IBS2) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-)| Length = 783 Score = 58.2 bits (139), Expect = 8e-09 Identities = 42/128 (32%), Positives = 70/128 (54%), Gaps = 1/128 (0%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 I + K PT++Q +IP I HD + ++ TGSGKTLA+ +P++ +EQ Sbjct: 227 ISAIAKLKFMKPTKIQKRTIPEIVAGHDVIGKAQTGSGKTLAFGIPMVER---WLEMQEQ 283 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKIL-GPDDKRLVQQLVGGANRSRQEEALKKN 397 G KR+G ++V++P+REL Q+ ++ + G V + GG + +Q+ L+K Sbjct: 284 G--VKRTGPMSLVLSPTRELAKQLGDHLKALCDGLPSAPYVCVVTGGLSILKQQRQLEKA 341 Query: 398 KPIIVVGT 421 IV+GT Sbjct: 342 D--IVIGT 347
>HAS1_CANAL (Q5AK59) ATP-dependent RNA helicase HAS1 (EC 3.6.1.-)| Length = 565 Score = 58.2 bits (139), Expect = 8e-09 Identities = 37/121 (30%), Positives = 65/121 (53%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 + + G T T+VQ+ +IP + D + + TGSGKTLA+L+P + + LK Sbjct: 123 IKEMGFTKMTKVQAKTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLYSLK-------I 175 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + R+G +++ P+REL +QI V + L + ++GGA+R ++ L K ++ Sbjct: 176 KPRNGTAVIIITPTRELALQIF-GVARELMQFHSQTCGIVIGGADRRQEATKLAKGVNLL 234 Query: 410 V 412 V Sbjct: 235 V 235
>RHLB_XYLFT (Q879Y6) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 543 Score = 58.2 bits (139), Expect = 8e-09 Identities = 36/121 (29%), Positives = 63/121 (52%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L + G T T +Q+ ++PV D Q+ TG+GKTLA+L+ +++ + + Sbjct: 24 LTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVVVNRLLSSPGLVNRNPE 83 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + R A+++AP+REL +QI + K G R + GG + RQ E L+K ++ Sbjct: 84 DPR----ALILAPTRELAIQIYNDAVKFGGNLGLRFA-LIYGGVDYDRQREMLRKGADVV 138 Query: 410 V 412 + Sbjct: 139 I 139
>EXP9_STRR6 (P0A4D8) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 58.2 bits (139), Expect = 8e-09 Identities = 37/121 (30%), Positives = 64/121 (52%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 + K G + +Q +IP+ + D + Q+ TG+GKT A+ LP L +I Sbjct: 16 IEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEKI-----------R 64 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + + I+A+V+AP+REL +Q E+ + G V+ + GG++ +Q +ALK I+ Sbjct: 65 TEEATIQALVIAPTRELAVQSQEELFR-FGRSKGVKVRSVYGGSSIEKQIKALKSGAHIV 123 Query: 410 V 412 V Sbjct: 124 V 124
>EXP9_STRPN (P0A4D7) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 58.2 bits (139), Expect = 8e-09 Identities = 37/121 (30%), Positives = 64/121 (52%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 + K G + +Q +IP+ + D + Q+ TG+GKT A+ LP L +I Sbjct: 16 IEKAGFVEASPIQEQTIPLALEGKDVIGQAQTGTGKTAAFGLPTLEKI-----------R 64 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + + I+A+V+AP+REL +Q E+ + G V+ + GG++ +Q +ALK I+ Sbjct: 65 TEEATIQALVIAPTRELAVQSQEELFR-FGRSKGVKVRSVYGGSSIEKQIKALKSGAHIV 123 Query: 410 V 412 V Sbjct: 124 V 124
>DRS1_YEAST (P32892) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-) (Deficiency| of ribosomal subunits protein 1) Length = 752 Score = 58.2 bits (139), Expect = 8e-09 Identities = 38/120 (31%), Positives = 61/120 (50%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G P+ +QSA+IP+ D + + TGSGKT A+++PI+ R K + Sbjct: 250 GYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIE--------RLLYKPAKIA 301 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 +V+ P+REL +Q V +V K + + L G RQ+E + K++P IV+ T Sbjct: 302 STRVIVLLPTRELAIQ-VADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRPDIVIAT 360
>ROK1_ASHGO (Q75AE1) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 569 Score = 57.8 bits (138), Expect = 1e-08 Identities = 29/91 (31%), Positives = 51/91 (56%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 + L + T PT +Q +IP+ Q D V + TGSGKTLA+L+P+L ++ Sbjct: 135 LSNLIENNFTEPTPIQCEAIPISLQNRDIVACAPTGSGKTLAFLIPLLQQV--------I 186 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKI 313 + +G++ ++++P++EL QI E K+ Sbjct: 187 SDKAVGTGVKGLIISPTKELANQIFDECSKL 217
>ROK1_DEBHA (Q6BP45) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 550 Score = 57.8 bits (138), Expect = 1e-08 Identities = 29/88 (32%), Positives = 50/88 (56%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 + L G T PT +Q +IP+ + D + + TGSGKTLA+L+P++ I + Sbjct: 126 LSNLIDAGFTEPTPIQDEAIPISLEGRDLIACAPTGSGKTLAFLIPLVQTI------LQS 179 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREV 304 + K GI ++++P+ EL +QI +E+ Sbjct: 180 NPNVKNYGIRGLIISPTNELAVQIFQEL 207
>DBP9_GIBZE (Q4IJ56) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 615 Score = 57.8 bits (138), Expect = 1e-08 Identities = 38/127 (29%), Positives = 65/127 (51%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 + + ++ PT VQ +IP+ D + ++ GSGKT AY+LP+LS I LKR Sbjct: 52 LQAIAQQKFAKPTLVQRKAIPLALNGQDVLAKADCGSGKTAAYVLPLLSSI--LKRKA-- 107 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 ++ + A+++ P+REL Q+ + +E+ K + + S+ + AL N Sbjct: 108 --TDSTAFTTALILVPTRELADQVSKAIEQFASFCAKDISTAKLTDKVSSKVQRALLSNS 165 Query: 401 PIIVVGT 421 P IV+ T Sbjct: 166 PDIVIST 172
>DDX47_HUMAN (Q9H0S4) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 57.4 bits (137), Expect = 1e-08 Identities = 43/120 (35%), Positives = 61/120 (50%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G T PT++Q +IP+ Q D + + TGSGKT A+ LPIL+ + E Sbjct: 43 GWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNAL-----------LETPQ 91 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 + A+V+ P+REL QI + E LG +VGG + Q AL K KP I++ T Sbjct: 92 RLFALVLTPTRELAFQISEQFE-ALGSSIGVQSAVIVGGIDSMSQSLALAK-KPHIIIAT 149
>DBP1_YEAST (P24784) ATP-dependent RNA helicase DBP1 (EC 3.6.1.-) (DEAD box| protein 1) (Helicase CA1) Length = 617 Score = 57.4 bits (137), Expect = 1e-08 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 4/94 (4%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEI---GPLKRA 211 ++ + T PT VQ SIP++++ D + + TGSGKT +L P+ +E+ GP Sbjct: 166 MENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSGKTGGFLFPLFTELFRSGPSPVP 225 Query: 212 REQGNSEKRSGI-EAVVVAPSRELGMQIVREVEK 310 + + R G A+V+AP+REL QI E K Sbjct: 226 EKAQSFYSRKGYPSALVLAPTRELATQIFEEARK 259
>UAP56_CHICK (Q5ZHZ0) Spliceosome RNA helicase BAT1 (EC 3.6.1.-) (DEAD box| protein UAP56) (56 kDa U2AF65-associated protein) Length = 428 Score = 57.4 bits (137), Expect = 1e-08 Identities = 39/120 (32%), Positives = 55/120 (45%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G P+EVQ IP D + Q+ +G GKT ++L L ++ P+ Sbjct: 64 GFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPV-----------TG 112 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 + +V+ +REL QI +E E+ V GG + EE LKKN P IVVGT Sbjct: 113 QVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLAVKKDEEVLKKNCPHIVVGT 172
>DBP4_ASHGO (Q75C76) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 763 Score = 57.4 bits (137), Expect = 1e-08 Identities = 39/115 (33%), Positives = 64/115 (55%) Frame = +2 Query: 77 TEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGIEAV 256 T++Q A+IPV + HD + + TGSGKTLA+L+P+L ++ + G+ A+ Sbjct: 65 TDIQRAAIPVALKGHDVLGAAKTGSGKTLAFLVPVLEKL-------YHERWTELDGLGAL 117 Query: 257 VVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 V++P+REL MQI + KI G ++GG + + E + K I++GT Sbjct: 118 VISPTRELAMQIYEVLVKI-GKYMSFSAGLVIGGKDVKFEMERVSKIN--ILIGT 169
>PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helicase prp-5 (EC| 3.6.1.-) Length = 1194 Score = 57.4 bits (137), Expect = 1e-08 Identities = 38/124 (30%), Positives = 62/124 (50%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 +D + G PT +Q ++PVI D + + TGSGKT+A+ LP+ L+ ++Q Sbjct: 573 LDTIESLGFEKPTPIQMQALPVIMSGRDVIGVAKTGSGKTMAFALPM------LRHVKDQ 626 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 G A+++ P+REL QI +++ R+V G A + + E LK+ Sbjct: 627 DPVTGDDGAIALIMTPTRELCTQIYSDLQPFAKALKLRVVAAYGGNAIKDQIAE-LKRGA 685 Query: 401 PIIV 412 IIV Sbjct: 686 EIIV 689
>SPB4_YARLI (Q6C193) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 626 Score = 57.4 bits (137), Expect = 1e-08 Identities = 32/92 (34%), Positives = 55/92 (59%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ID + + G T T VQ++ IP+ + D ++++ TGSGKT+A+L+P++ + L +E Sbjct: 15 IDTMEQFGFTDMTPVQASVIPMFAGNKDVIVEAVTGSGKTIAFLVPLIQRM--LNLLKEG 72 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKIL 316 R + +VVV+P+REL Q ++ IL Sbjct: 73 PAVSGR--VYSVVVSPTRELARQTYEVLQSIL 102
>DBP8_KLULA (Q6CXW0) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 435 Score = 57.0 bits (136), Expect = 2e-08 Identities = 40/127 (31%), Positives = 64/127 (50%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ LN + PT +Q A IP I + D + + TGSGKT+A+ P+L++ Sbjct: 16 VEALNAMKIVQPTAIQKACIPEILKGRDCIGGANTGSGKTIAFAAPMLTKW--------- 66 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 SE G+ +V+ P+REL MQI + G V +VGG + +Q L+K + Sbjct: 67 --SEDPQGMFGIVLTPTRELAMQIAEQF-TAFGSAMNIRVAIVVGGESIVQQAIELQK-R 122 Query: 401 PIIVVGT 421 P ++ T Sbjct: 123 PHFIIAT 129
>DBP4_CANGA (Q6FPT7) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 765 Score = 57.0 bits (136), Expect = 2e-08 Identities = 42/124 (33%), Positives = 67/124 (54%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 LN+ T++Q SI Q HD + TGSGKTLA+L+P+L K RE+ Sbjct: 56 LNEASFIKMTDIQRDSIVTSLQGHDVFGTAKTGSGKTLAFLVPVLE-----KLYRERWT- 109 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + G+ A++++P+REL MQI + KI G + ++GG + + + E + K I Sbjct: 110 -EFDGLGALIISPTRELAMQIYEVLVKI-GSHTQFSAGLVIGGKDVNFELERIAKIN--I 165 Query: 410 VVGT 421 ++GT Sbjct: 166 LIGT 169
>RHLB_XYLFA (Q9PA24) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 543 Score = 57.0 bits (136), Expect = 2e-08 Identities = 35/121 (28%), Positives = 63/121 (52%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L + G T T +Q+ ++PV D Q+ TG+GKTLA+L+ +++ + + Sbjct: 24 LTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVVVNRLLSRPGLVNRNPE 83 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + R A+++AP+REL +QI + K G R + GG + +Q E L+K ++ Sbjct: 84 DPR----ALILAPTRELAIQIYNDAVKFGGNLGLRFA-LIYGGVDYDKQREMLRKGADVV 138 Query: 410 V 412 + Sbjct: 139 I 139
>DBP8_NEUCR (Q7RYZ7) ATP-dependent RNA helicase dbp-8 (EC 3.6.1.-)| Length = 626 Score = 57.0 bits (136), Expect = 2e-08 Identities = 41/127 (32%), Positives = 64/127 (50%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 + L + PT +Q IP I + D + S TGSGKT+A+ +PIL Q Sbjct: 207 VQSLANMAIKRPTGIQKGCIPEILKGRDCIGGSRTGSGKTVAFAVPIL-----------Q 255 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + S I V++ P+REL +QI+ +V + P + V + GGA+ +Q L K + Sbjct: 256 QWAANPSAIFGVILTPTRELALQIMEQVIALSQPHVLKAV-LITGGADMRKQAIDLAK-R 313 Query: 401 PIIVVGT 421 P +V+ T Sbjct: 314 PHLVIAT 320
>DDX18_HUMAN (Q9NVP1) ATP-dependent RNA helicase DDX18 (EC 3.6.1.-) (DEAD box| protein 18) (Myc-regulated DEAD box protein) (MrDb) Length = 670 Score = 56.6 bits (135), Expect = 2e-08 Identities = 37/121 (30%), Positives = 65/121 (53%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 + + G T+ TE+Q SI + + D + + TGSGKTLA+L+P + I L+ Sbjct: 194 IKEMGFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLR-------F 246 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 R+G ++++P+REL MQ +++++ ++GG+NRS + + L II Sbjct: 247 MPRNGTGVLILSPTRELAMQTFGVLKELM-THHVHTYGLIMGGSNRSAEAQKLGNGINII 305 Query: 410 V 412 V Sbjct: 306 V 306
>SPB4_GIBZE (Q4HVW2) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 637 Score = 56.6 bits (135), Expect = 2e-08 Identities = 31/91 (34%), Positives = 52/91 (57%) Frame = +2 Query: 44 DRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQG 223 D + G T VQ+A++P D V+++ TGSGKTLA+L+P++ ++ L Sbjct: 27 DAVATMGFDQMTPVQAATLPHFMGNKDVVVEAVTGSGKTLAFLIPLVQKLLRL------S 80 Query: 224 NSEKRSGIEAVVVAPSRELGMQIVREVEKIL 316 K+ + A++V+P+REL QI + K+L Sbjct: 81 EPTKKHHVAAIIVSPTRELAAQIHTVLMKLL 111
>DBP8_YARLI (Q6C799) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 442 Score = 56.6 bits (135), Expect = 2e-08 Identities = 40/126 (31%), Positives = 64/126 (50%) Frame = +2 Query: 44 DRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQG 223 + L+ +T P+ +Q A IP I + D + + TGSGKT+A+ P+L+E Sbjct: 14 ESLSNMAITKPSAIQKACIPQIMKGKDCIGGARTGSGKTIAFAAPMLAEW---------- 63 Query: 224 NSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKP 403 S+ GI +V+ P+REL +QI + LG + V + GG + +Q L+K P Sbjct: 64 -SKDPCGIFGLVLTPTRELAIQIAEQF-TALGANMNIRVALIYGGVDMVKQSLELQK-MP 120 Query: 404 IIVVGT 421 V+ T Sbjct: 121 HFVIAT 126
>DBP3_NEUCR (Q7S5R1) ATP-dependent RNA helicase dbp-3 (EC 3.6.1.-)| Length = 614 Score = 56.6 bits (135), Expect = 2e-08 Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 1/117 (0%) Frame = +2 Query: 68 TSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSG- 244 T+PT +QSAS P D + + TGSGKT+A+ LP + + R + + NS R+ Sbjct: 200 TNPTPIQSASWPFSLSGRDVIGIAETGSGKTMAFSLPCVESLA--SRPKPKFNSRDRTAH 257 Query: 245 IEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVV 415 AV+V+P+REL MQ + + V + GG++++ Q L KN + ++ Sbjct: 258 PRAVIVSPTRELAMQTHAALSGLASLVGLSAV-CIFGGSDKNEQRNLLYKNNGVDII 313
>DEAD_KLEPN (P33906) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 642 Score = 56.2 bits (134), Expect = 3e-08 Identities = 41/127 (32%), Positives = 62/127 (48%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ L G P+ +Q+ IP + D + + TGSGKT A+ LP+L+ I P RA Sbjct: 17 LEALTDLGYEKPSPIQAECIPHLLDGRDVLGMAQTGSGKTAAFSLPLLNNIDPELRAP-- 74 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + +V+AP+REL +Q+ + + V L GG Q AL++ Sbjct: 75 ---------QILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLRALRQG- 124 Query: 401 PIIVVGT 421 P IVVGT Sbjct: 125 PQIVVGT 131
>DDX18_MOUSE (Q8K363) ATP-dependent RNA helicase DDX18 (EC 3.6.1.-) (DEAD box| protein 18) Length = 660 Score = 56.2 bits (134), Expect = 3e-08 Identities = 37/121 (30%), Positives = 64/121 (52%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 + + G TE+Q SI + + D + + TGSGKTLA+L+P++ I LK Sbjct: 184 IEEMGFKRMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKLK-------F 236 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 R+G ++++P+REL MQ +++++ ++GG+NRS + + L II Sbjct: 237 MPRNGTGVLILSPTRELAMQTFGVLKELM-THHVHTYGLIMGGSNRSAEVQKLLNGINII 295 Query: 410 V 412 V Sbjct: 296 V 296
>DBP9_CRYNE (Q5K7L2) ATP-dependent RNA helicase DBP9 (EC 3.6.1.-)| Length = 627 Score = 56.2 bits (134), Expect = 3e-08 Identities = 35/116 (30%), Positives = 65/116 (56%) Frame = +2 Query: 74 PTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGIEA 253 PT VQ+ +IP++ + D + ++ TGSGKT AY++P + +I K ++E ++ A Sbjct: 44 PTLVQAKAIPLLLEGKDVLARARTGSGKTAAYIVPAVQKILEAKADLSPASAEYQA-TRA 102 Query: 254 VVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 +++ P++EL +Q+ + + D LVQ + A + + L +KP IV+ T Sbjct: 103 IILVPTKELALQVSSFTKNVTKYCD-GLVQCVDVAAGGASIQRVLLNDKPDIVIST 157
>DDX47_MOUSE (Q9CWX9) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 56.2 bits (134), Expect = 3e-08 Identities = 43/120 (35%), Positives = 60/120 (50%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G PT++Q +IP+ Q D + + TGSGKT A+ LPIL+ + E Sbjct: 43 GWAKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNAL-----------LETPQ 91 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 + A+V+ P+REL QI + E LG +VGG + Q AL K KP IV+ T Sbjct: 92 RLFALVLTPTRELAFQISEQFE-ALGSSIGVQCAVIVGGIDSMSQSLALAK-KPHIVIAT 149
>DBP8_CRYNE (Q5KPU1) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 619 Score = 56.2 bits (134), Expect = 3e-08 Identities = 42/127 (33%), Positives = 65/127 (51%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 I L + PTE+Q+A + I D + + TGSGKT+A+ LPI+ I AR+ Sbjct: 164 ITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPIVERI-----ARDP 218 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 G+ AVV+ P+REL Q+ E ++G +VGG + +Q + L+ + Sbjct: 219 ------FGVWAVVLTPTRELAYQL-SEQFLVIGKPLGLTTATIVGGMDMMKQAQELEA-R 270 Query: 401 PIIVVGT 421 P I+V T Sbjct: 271 PHIIVAT 277
>ROK1_GIBZE (Q4IPI1) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 693 Score = 56.2 bits (134), Expect = 3e-08 Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 13/103 (12%) Frame = +2 Query: 44 DRLNKEGLTSPTEVQSASIPVISQRH-------------DAVIQSYTGSGKTLAYLLPIL 184 D L +G PTEVQ S+P++ D + + TGSGKT+++L+P + Sbjct: 172 DNLVFQGYRVPTEVQMGSLPLLVHPQAALKDEDGLDGGVDFLAIAPTGSGKTISFLIPAI 231 Query: 185 SEIGPLKRAREQGNSEKRSGIEAVVVAPSRELGMQIVREVEKI 313 + I R R + N+ +EAV+VAP+REL QIV E +K+ Sbjct: 232 NNI---LRRRSEENTGNIHELEAVIVAPTRELVHQIVSEGQKL 271 Score = 28.9 bits (63), Expect = 5.2 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 8/83 (9%) Frame = +2 Query: 47 RLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKT------LAYLLPILSEI--GPL 202 R +EG + T IP + + + S +GKT +LL L + Sbjct: 572 RAGREGGIAVTFYTKEDIPFVKMVANVIAVSEKQAGKTGDEAGVQKWLLDALPNVRKADR 631 Query: 203 KRAREQGNSEKRSGIEAVVVAPS 271 K+ +E+GN +RSG+++ + + S Sbjct: 632 KKLKERGNEARRSGVKSKISSKS 654
>ROK1_YEAST (P45818) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-) (Rescuer of| KEM1 protein 1) Length = 564 Score = 56.2 bits (134), Expect = 3e-08 Identities = 29/91 (31%), Positives = 52/91 (57%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ L + G T PT +Q IPV D + TGSGKTLA+L+P++ +I Sbjct: 134 LNNLIENGFTEPTPIQCECIPVALNNRDVLACGPTGSGKTLAFLIPLVQQI--------- 184 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKI 313 + ++ +G++ ++++P++EL QI E K+ Sbjct: 185 IDDKQTAGLKGLIISPTKELANQIFIECFKL 215
>DRS1_SCHPO (Q09903) ATP-dependent RNA helicase drs1 (EC 3.6.1.-)| Length = 754 Score = 56.2 bits (134), Expect = 3e-08 Identities = 42/124 (33%), Positives = 64/124 (51%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L+ G PT++Q +IP+ D V + TGSGKT A+++PIL + L R + Sbjct: 274 LSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSGKTAAFIVPILERL--LYRPK----- 326 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 K +++ P+REL MQ KI D +V +GG + QE+ L+K +P I Sbjct: 327 -KVPTTRVLILCPTRELAMQCHSVATKIASFTD-IMVCLCIGGLSLKLQEQELRK-RPDI 383 Query: 410 VVGT 421 V+ T Sbjct: 384 VIAT 387
>RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 574 Score = 55.8 bits (133), Expect = 4e-08 Identities = 35/121 (28%), Positives = 64/121 (52%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L G T T +Q+ ++PV D Q+ TG+GKTLA+L+ +++ + ++ Sbjct: 24 LESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRLLNRPALADRKPE 83 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + R A+++AP+REL +QI ++ K G D + GG + +Q E L++ +I Sbjct: 84 DPR----ALILAPTRELAIQIHKDAVK-FGADLGLRFALVYGGVDYDKQRELLQQGVDVI 138 Query: 410 V 412 + Sbjct: 139 I 139
>MAK5_CANGA (Q6FY67) ATP-dependent RNA helicase MAK5 (EC 3.6.1.-)| Length = 733 Score = 55.8 bits (133), Expect = 4e-08 Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 3/120 (2%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 I+ L+ G T T +Q SIP + D + ++ TGSGKTLAY +PI+ ++ Sbjct: 167 INGLSNLGFTEMTPIQKLSIPAALEGKDIMGKASTGSGKTLAYGIPIIEKM--------- 217 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKI---LGPDDKRLVQQLVGGANRSRQEEALK 391 S+ ++ P+REL Q+ + ++ + L + ++ L GG + +QE LK Sbjct: 218 IKSKDNLRTNGIIFTPTRELAQQVTKHLQNVCSMLLKKNPYMILSLTGGLSIQKQERLLK 277
>RRP3_GIBZE (Q4IFI0) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 486 Score = 55.8 bits (133), Expect = 4e-08 Identities = 45/116 (38%), Positives = 58/116 (50%) Frame = +2 Query: 74 PTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGIEA 253 PT +Q SIPV Q D + + TGSGKT A+ LP+L Q +K + Sbjct: 83 PTPIQEKSIPVALQGRDIIGLAETGSGKTAAFALPVL-----------QALLDKPQPLFG 131 Query: 254 VVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 +V+AP+REL QI + E LG +VGG + Q AL K KP IVV T Sbjct: 132 LVLAPTRELATQIGQAFE-ALGSLISLRCAVIVGGLDMVPQAIALGK-KPHIVVAT 185
>SPB4_USTMA (Q4P9E5) ATP-dependent rRNA helicase SPB4 (EC 3.6.1.-)| Length = 767 Score = 55.8 bits (133), Expect = 4e-08 Identities = 31/101 (30%), Positives = 55/101 (54%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 + L+ G T VQ+++IP+ D V+++ TGSGKTLA+++P+L + + Sbjct: 40 VSLLSDLGFGQMTPVQASTIPLFVSHKDVVVEAVTGSGKTLAFVIPVLEMLA------RR 93 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQ 343 K+ + A++V+P+REL QI + + L + VQ Sbjct: 94 TTRLKKDEVGALIVSPTRELAEQIYKVLVMFLDAQNHAHVQ 134
>RHLB_XANAC (Q8PFZ3) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 571 Score = 55.8 bits (133), Expect = 4e-08 Identities = 36/121 (29%), Positives = 62/121 (51%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L G T T +Q+ ++PV D Q+ TG+GKTLA+L+ +++ + R Sbjct: 24 LESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRL----LIRPALAD 79 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 K A+++AP+REL +QI ++ K G D + GG + +Q E L++ +I Sbjct: 80 RKPEDPRALILAPTRELAIQIHKDAVK-FGADLGLRFALVYGGVDYDKQRELLQQGVDVI 138 Query: 410 V 412 + Sbjct: 139 I 139
>RHLB_XANCP (Q8P4D4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 573 Score = 55.8 bits (133), Expect = 4e-08 Identities = 36/121 (29%), Positives = 62/121 (51%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L G T T +Q+ ++PV D Q+ TG+GKTLA+L+ +++ + R Sbjct: 24 LESAGFTRCTPIQALTLPVALPGGDVAGQAQTGTGKTLAFLVAVMNRL----LIRPALAD 79 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 K A+++AP+REL +QI ++ K G D + GG + +Q E L++ +I Sbjct: 80 RKPEDPRALILAPTRELAIQIHKDAVK-FGADLGLRFALVYGGVDYDKQRELLQQGVDVI 138 Query: 410 V 412 + Sbjct: 139 I 139
>PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1227 Score = 55.5 bits (132), Expect = 5e-08 Identities = 38/124 (30%), Positives = 62/124 (50%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 +D ++ G PT +Q ++P + D + + TGSGKT+A+LLP+ I ++Q Sbjct: 609 LDVVDNLGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHI------KDQ 662 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + G +++ P+REL +QI ++ + L R V GGA Q LK+ Sbjct: 663 PPLKDTDGPIGLIMTPTRELAVQIHKDCKPFLKMMGLRAV-CAYGGAPIREQIAELKRGA 721 Query: 401 PIIV 412 IIV Sbjct: 722 EIIV 725
>RRP3_EMENI (Q5B5E7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 465 Score = 55.5 bits (132), Expect = 5e-08 Identities = 43/120 (35%), Positives = 60/120 (50%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G +PT +QS +IP+ + D + + TGSGKT A+ LP+L Q E Sbjct: 65 GYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFALPML-----------QALMEAPQ 113 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 + +V+AP+REL QI + E LG +VGG + Q AL K KP I+V T Sbjct: 114 TLFGLVLAPTRELAYQISQAFE-TLGSTIGVRCAVIVGGMDMVAQSIALGK-KPHIIVAT 171
>DDX52_RAT (Q99PT0) Probable ATP-dependent RNA helicase DDX52 (EC 3.6.1.-)| (DEAD box protein 52) (ATP-dependent RNA helicase ROK1-like) (rROK1L) Length = 598 Score = 55.5 bits (132), Expect = 5e-08 Identities = 31/84 (36%), Positives = 46/84 (54%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G PT +Q +IPV+ + + + TGSGKTLA+ +PIL ++ Sbjct: 185 GFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQL----------KQPTNK 234 Query: 242 GIEAVVVAPSRELGMQIVREVEKI 313 G A+V++P+REL QI RE+ KI Sbjct: 235 GFRALVISPTRELASQIHRELIKI 258
>DDX52_MOUSE (Q8K301) Probable ATP-dependent RNA helicase DDX52 (EC 3.6.1.-)| (DEAD box protein 52) (ATP-dependent RNA helicase ROK1-like) Length = 598 Score = 55.5 bits (132), Expect = 5e-08 Identities = 31/84 (36%), Positives = 46/84 (54%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G PT +Q +IPV+ + + + TGSGKTLA+ +PIL ++ Sbjct: 185 GFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQL----------KQPTNK 234 Query: 242 GIEAVVVAPSRELGMQIVREVEKI 313 G A+V++P+REL QI RE+ KI Sbjct: 235 GFRALVISPTRELASQIHRELIKI 258
>DBP8_ASHGO (Q756G5) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 435 Score = 55.5 bits (132), Expect = 5e-08 Identities = 41/126 (32%), Positives = 62/126 (49%) Frame = +2 Query: 44 DRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQG 223 + LN +T PT +Q A IP I D + + TGSGKT+A+ P+L++ Sbjct: 19 EALNSMKITQPTTIQKACIPEILAGRDCIGGAKTGSGKTIAFAAPMLTKW---------- 68 Query: 224 NSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKP 403 S G+ +V+ P+REL MQI + LG V +VGG + Q L++ KP Sbjct: 69 -SADPCGMFGIVLTPTRELAMQIAEQF-TALGSVMNIRVALVVGGEDIVSQALELQR-KP 125 Query: 404 IIVVGT 421 ++ T Sbjct: 126 HFIIAT 131
>DDX17_MOUSE (Q501J6) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)| (DEAD box protein 17) Length = 650 Score = 55.5 bits (132), Expect = 5e-08 Identities = 41/124 (33%), Positives = 59/124 (47%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 +D L + T PT +Q P+ D V + TGSGKTLAYLLP + I Q Sbjct: 104 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHI------NHQ 157 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 E+ G +V+AP+REL Q V++V G + + GGA + Q L++ Sbjct: 158 PYLERGDGPICLVLAPTRELAQQ-VQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV 216 Query: 401 PIIV 412 I + Sbjct: 217 EICI 220
>DDX17_HUMAN (Q92841) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)| (DEAD box protein 17) (RNA-dependent helicase p72) (DEAD box protein p72) Length = 650 Score = 55.5 bits (132), Expect = 5e-08 Identities = 41/124 (33%), Positives = 59/124 (47%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 +D L + T PT +Q P+ D V + TGSGKTLAYLLP + I Q Sbjct: 104 MDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHI------NHQ 157 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 E+ G +V+AP+REL Q V++V G + + GGA + Q L++ Sbjct: 158 PYLERGDGPICLVLAPTRELAQQ-VQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGV 216 Query: 401 PIIV 412 I + Sbjct: 217 EICI 220
>DEAD_BUCAP (Q8K9H6) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 55.5 bits (132), Expect = 5e-08 Identities = 41/127 (32%), Positives = 62/127 (48%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 I L+K G P+ +Q+A IP++ + D + + TGSGKT A+ LP+L + +A Sbjct: 18 IKSLSKMGYVKPSPIQAACIPLLLEGRDVLGMAQTGSGKTAAFSLPLLHNLNINLKAP-- 75 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + +V+AP+REL +Q+ V L GG Q AL++ Sbjct: 76 ---------QILVLAPTRELAVQVAEAFSDFSKYIMGIHVLPLYGGQRYEVQLRALRQG- 125 Query: 401 PIIVVGT 421 P IVVGT Sbjct: 126 PQIVVGT 132
>DEAD_BUCAI (P57453) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 55.5 bits (132), Expect = 5e-08 Identities = 40/127 (31%), Positives = 62/127 (48%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 I LN+ G P+ +Q++ IP++ + D + + TGSGKT A+ LP+L + +A Sbjct: 18 IQSLNEMGYVKPSPIQASCIPLLLEGRDVLGMAQTGSGKTAAFSLPLLHNLNINLKAP-- 75 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + +V+AP+REL +Q+ V L GG Q AL++ Sbjct: 76 ---------QILVLAPTRELAVQVAEAFSDFSKYMIGIHVLPLYGGQRYELQLRALRQG- 125 Query: 401 PIIVVGT 421 P IVVGT Sbjct: 126 PQIVVGT 132
>DDX52_HUMAN (Q9Y2R4) Probable ATP-dependent RNA helicase DDX52 (EC 3.6.1.-)| (DEAD box protein 52) (ATP-dependent RNA helicase ROK1-like) Length = 599 Score = 55.5 bits (132), Expect = 5e-08 Identities = 30/84 (35%), Positives = 46/84 (54%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G PT +Q +IPV+ + + + TGSGKTLA+ +PIL ++ Sbjct: 184 GFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQL----------KQPANK 233 Query: 242 GIEAVVVAPSRELGMQIVREVEKI 313 G A++++P+REL QI RE+ KI Sbjct: 234 GFRALIISPTRELASQIHRELIKI 257
>RRP3_USTMA (Q4P3U9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 551 Score = 55.5 bits (132), Expect = 5e-08 Identities = 42/127 (33%), Positives = 60/127 (47%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ G PT +Q +IP Q D + + TGSGKT A+ +PIL Q Sbjct: 116 VEACTNMGFKHPTPIQVKAIPEALQARDVIGLAQTGSGKTAAFTIPIL-----------Q 164 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + A V+AP+REL QI ++VE LG +VGG + Q AL K + Sbjct: 165 ALWDNPKPFFACVLAPTRELAYQISQQVE-ALGSTIGVRSATIVGGMDMMSQSIALSK-R 222 Query: 401 PIIVVGT 421 P ++V T Sbjct: 223 PHVIVAT 229
>DBP2_KLULA (Q6CIV2) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 554 Score = 55.5 bits (132), Expect = 5e-08 Identities = 38/124 (30%), Positives = 60/124 (48%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 +D + +EG PT +Q P+ D + + TGSGKTL+Y LP + I Q Sbjct: 125 LDEVKQEGFAKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHI------NAQ 178 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 G +V+AP+REL +QI +E K G + + GG +S+Q L++ Sbjct: 179 PLLSPGDGPIVLVLAPTRELAVQIQKECSK-FGASSRIRNTCVYGGVPKSQQIRDLQRGV 237 Query: 401 PIIV 412 I++ Sbjct: 238 EILI 241
>ROK1_CANGA (Q6FN65) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 565 Score = 55.5 bits (132), Expect = 5e-08 Identities = 30/91 (32%), Positives = 51/91 (56%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ L + T PT +Q +IP+ D + + TGSGKTLA+L+P+L +I K Sbjct: 136 LNNLIENHFTEPTPIQCEAIPLCLNGRDLLACAPTGSGKTLAFLIPLLQQIIEEKNF--- 192 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKI 313 SG++ ++++P++EL QI E K+ Sbjct: 193 ------SGVKGLIISPTKELATQIFNECVKL 217
>DEAD_SHIFL (P0A9P8) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 55.5 bits (132), Expect = 5e-08 Identities = 40/127 (31%), Positives = 61/127 (48%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ LN G P+ +Q+ IP + D + + TGSGKT A+ LP+L + P +A Sbjct: 17 LEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAP-- 74 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + +V+AP+REL +Q+ + V L GG Q AL++ Sbjct: 75 ---------QILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQG- 124 Query: 401 PIIVVGT 421 P IVVGT Sbjct: 125 PQIVVGT 131
>DEAD_ECOLI (P0A9P6) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 55.5 bits (132), Expect = 5e-08 Identities = 40/127 (31%), Positives = 61/127 (48%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ LN G P+ +Q+ IP + D + + TGSGKT A+ LP+L + P +A Sbjct: 17 LEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAP-- 74 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + +V+AP+REL +Q+ + V L GG Q AL++ Sbjct: 75 ---------QILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQG- 124 Query: 401 PIIVVGT 421 P IVVGT Sbjct: 125 PQIVVGT 131
>DEAD_ECOL6 (P0A9P7) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 55.5 bits (132), Expect = 5e-08 Identities = 40/127 (31%), Positives = 61/127 (48%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ LN G P+ +Q+ IP + D + + TGSGKT A+ LP+L + P +A Sbjct: 17 LEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAP-- 74 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + +V+AP+REL +Q+ + V L GG Q AL++ Sbjct: 75 ---------QILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQG- 124 Query: 401 PIIVVGT 421 P IVVGT Sbjct: 125 PQIVVGT 131
>DEAD_ECO57 (Q8XA87) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 55.5 bits (132), Expect = 5e-08 Identities = 40/127 (31%), Positives = 61/127 (48%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ LN G P+ +Q+ IP + D + + TGSGKT A+ LP+L + P +A Sbjct: 17 LEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAP-- 74 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 + +V+AP+REL +Q+ + V L GG Q AL++ Sbjct: 75 ---------QILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQG- 124 Query: 401 PIIVVGT 421 P IVVGT Sbjct: 125 PQIVVGT 131
>RRP3_CRYNE (Q5KBE2) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 484 Score = 55.5 bits (132), Expect = 5e-08 Identities = 42/120 (35%), Positives = 60/120 (50%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G P+++Q+ +IP + D + + TGSGKT A+ LPIL + E Sbjct: 57 GFKKPSDIQAEAIPHALEGKDIIGLAQTGSGKTAAFSLPILQTLW-----------ENPQ 105 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIVVGT 421 A+V+AP+REL QI ++V LG LVGG + Q AL K +P I+V T Sbjct: 106 PFFALVLAPTRELAYQISQQVTS-LGSGIGVRTAVLVGGMDMMSQSIALSK-RPHIIVAT 163
>DRS1_GIBZE (Q4I830) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 796 Score = 55.1 bits (131), Expect = 7e-08 Identities = 41/117 (35%), Positives = 57/117 (48%) Frame = +2 Query: 62 GLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRS 241 G T PT +Q+ SIP+ D V + TGSGKT A++LPIL + L R + K Sbjct: 275 GFTKPTPIQAKSIPIALMGKDVVGGAETGSGKTGAFILPILERL--LYRPK------KIP 326 Query: 242 GIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPIIV 412 VV+ P+REL +Q K+ D + VGG + QE LK +I+ Sbjct: 327 TTRVVVLLPTRELAIQCHAVATKLAAFTDIKFT-LAVGGLSLKAQELELKLRPDVII 382
>DDX4_RAT (Q64060) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (rVLG) Length = 713 Score = 55.1 bits (131), Expect = 7e-08 Identities = 33/89 (37%), Positives = 49/89 (55%) Frame = +2 Query: 44 DRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQG 223 + + K G T T VQ SIP++ D + + TGSGKT A+LLPIL+ + ++ Sbjct: 286 NNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHM--MRDGITAS 343 Query: 224 NSEKRSGIEAVVVAPSRELGMQIVREVEK 310 ++ E ++VAP+REL QI E K Sbjct: 344 RFKELQEPECIIVAPTRELINQIYLEARK 372
>DDX28_HUMAN (Q9NUL7) Probable ATP-dependent RNA helicase DDX28 (EC 3.6.1.-)| (Mitochondrial DEAD box protein 28) Length = 540 Score = 55.1 bits (131), Expect = 7e-08 Identities = 39/103 (37%), Positives = 54/103 (52%) Frame = +2 Query: 65 LTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSG 244 + PT VQS++IP + + V + TGSGKTL+YLLP+L + + +S Sbjct: 148 VVQPTTVQSSTIPSLLRGRHVVCAAETGSGKTLSYLLPLLQRL----LGQPSLDSLPIPA 203 Query: 245 IEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSR 373 +V+ PSREL Q VR V + LG LV+ L GG R Sbjct: 204 PRGLVLVPSRELAQQ-VRAVAQPLGRSLGLLVRDLEGGHGMRR 245
>DDX4_MOUSE (Q61496) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (Mvh) Length = 702 Score = 55.1 bits (131), Expect = 7e-08 Identities = 33/89 (37%), Positives = 49/89 (55%) Frame = +2 Query: 44 DRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQG 223 + + K G T T VQ SIP++ D + + TGSGKT A+LLPIL+ + ++ Sbjct: 274 NNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHM--MRDGITAS 331 Query: 224 NSEKRSGIEAVVVAPSRELGMQIVREVEK 310 ++ E ++VAP+REL QI E K Sbjct: 332 RFKELQEPECIIVAPTRELINQIYLEARK 360
>DBP8_SCHPO (Q9HGM5) ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)| Length = 453 Score = 55.1 bits (131), Expect = 7e-08 Identities = 43/127 (33%), Positives = 64/127 (50%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ID L + PT++Q I I + + + + TGSGKT A+ LPI+ + Sbjct: 19 IDTLKALAIYEPTDIQEGVIAQILEGRNCIGGAKTGSGKTAAFALPIIEKW--------- 69 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNK 400 S+ SGI A+++ P+REL +QI E LG + +VGG + RQ L K + Sbjct: 70 --SKDPSGIFALILTPTRELAIQI-DEQFAALGANLNLKHALIVGGMDMIRQSIDLSK-R 125 Query: 401 PIIVVGT 421 P +VV T Sbjct: 126 PHVVVAT 132
>DBP3_SCHPO (Q10202) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 578 Score = 55.1 bits (131), Expect = 7e-08 Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 4/126 (3%) Frame = +2 Query: 56 KEGLTS---PTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGN 226 +EGL + PT +Q+A+ P + D V + TGSGKT+A+ +P L + G Sbjct: 179 REGLKNYKEPTPIQAATWPYLLAGRDVVGIAETGSGKTVAFGIPALQYL--------NGL 230 Query: 227 SEKRSGIEAVVVAPSRELGMQIVREVEKIL-GPDDKRLVQQLVGGANRSRQEEALKKNKP 403 S+ +S +VV+P+REL +Q + ++ G + K +V + GGA +S Q A K Sbjct: 231 SDNKSVPRVLVVSPTRELAIQTYENLNSLIQGTNLKAVV--VYGGAPKSEQARAAKNAS- 287 Query: 404 IIVVGT 421 +++GT Sbjct: 288 -VIIGT 292
>DBP8_CANGA (Q6FQZ0) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 437 Score = 55.1 bits (131), Expect = 7e-08 Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 1/128 (0%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQ 220 ++ L+ + +PT +QS IP I + D + + TGSGKT+A+ P+L++ Sbjct: 21 VESLDAMRIRTPTAIQSGCIPEILKGRDCIGGAKTGSGKTIAFAGPMLTQW--------- 71 Query: 221 GNSEKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALK-KN 397 SE +G+ +V+ P+REL MQI + LG V +VGG S ++AL+ + Sbjct: 72 --SEDPTGMFGIVLTPTRELAMQIAEQF-TALGSYMNIRVALVVGG--ESIVDQALQLQR 126 Query: 398 KPIIVVGT 421 KP ++ T Sbjct: 127 KPHFIIAT 134
>DDX4_HUMAN (Q9NQI0) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) Length = 724 Score = 54.7 bits (130), Expect = 9e-08 Identities = 34/89 (38%), Positives = 48/89 (53%) Frame = +2 Query: 44 DRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQG 223 + + K G T T VQ SIP+I D + + TGSGKT A+LLPIL+ + + Sbjct: 301 NNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHM--MHDGITAS 358 Query: 224 NSEKRSGIEAVVVAPSRELGMQIVREVEK 310 ++ E ++VAP+REL QI E K Sbjct: 359 RFKELQEPECIIVAPTRELVNQIYLEARK 387
>DDX41_MOUSE (Q91VN6) Probable ATP-dependent RNA helicase DDX41 (EC 3.6.1.-)| (DEAD box protein 41) Length = 622 Score = 54.7 bits (130), Expect = 9e-08 Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 5/126 (3%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L K+G+ PT +Q IP I D + ++TGSGKTL + LP++ + L++ + S Sbjct: 196 LKKKGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI--MFCLEQEKRLPFS 253 Query: 230 EKRSGIEAVVVAPSRELGMQ---IVREVEKILGPDDKRLVQ--QLVGGANRSRQEEALKK 394 KR G +++ PSREL Q I+ ++L D L++ +GG + Q E ++ Sbjct: 254 -KREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRH 312 Query: 395 NKPIIV 412 ++V Sbjct: 313 GVHMMV 318
>DBP4_DEBHA (Q6BXG0) ATP-dependent RNA helicase DBP4 (EC 3.6.1.-)| Length = 766 Score = 54.7 bits (130), Expect = 9e-08 Identities = 36/124 (29%), Positives = 65/124 (52%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L + S T++Q +IP+ + D + + TGSGKTLA+L+P + + + Sbjct: 61 LKEASFASLTDIQKKTIPISLKGEDVMGTAKTGSGKTLAFLIPTIESL-------IRNKI 113 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 + G+ A++++P+REL +QI + KI G + + GG + ++E + K I Sbjct: 114 TEYDGLAALIISPTRELAVQIFEVLVKI-GKHNNFSAGLVTGGKDVKYEKERVSKMN--I 170 Query: 410 VVGT 421 +VGT Sbjct: 171 LVGT 174
>ROK1_NEUCR (Q7SFC8) ATP-dependent RNA helicase rok-1 (EC 3.6.1.-)| Length = 781 Score = 54.7 bits (130), Expect = 9e-08 Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 24/143 (16%) Frame = +2 Query: 44 DRLNKEGLTSPTEVQSASIPV------------------ISQRHDAVIQSYTGSGKTLAY 169 D + ++G PTEVQ S+P+ + + D + + TGSGKT+++ Sbjct: 197 DNITRQGFRVPTEVQMGSLPLQLRPEMALEKATDVEDVKVEKGIDFLGVAPTGSGKTISF 256 Query: 170 LLPILSEIGPLKRAREQGNSEKRSGI-EAVVVAPSRELGMQIVREVEKILGPDDKRLV-- 340 L+P + I +KR E E + +A+VVAP+REL QIV E K+ R+V Sbjct: 257 LIPAIDAI--IKRRAEDYTPETDEHVLQAIVVAPTRELASQIVNEGRKLAIGTGVRVVLM 314 Query: 341 ---QQLVGGANRSRQEEALKKNK 400 +LV +N + E K + Sbjct: 315 KRTLRLVAESNEQEETEQEAKEE 337
>DED1_DEBHA (Q6BU54) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 630 Score = 54.7 bits (130), Expect = 9e-08 Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 4/94 (4%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEI---GPLKRA 211 ++ + T PT VQ S+P+++ D + + TGSGKT +L P+LSE GP + Sbjct: 168 VENVKLSRFTKPTPVQKYSVPIVAAGRDLMACAQTGSGKTGGFLFPVLSESYMNGPAEVP 227 Query: 212 REQGN-SEKRSGIEAVVVAPSRELGMQIVREVEK 310 G S + A+V+AP+REL QI E +K Sbjct: 228 ETAGAFSSHKVYPTALVMAPTRELVSQIFDEAKK 261
>PRP28_KLULA (Q6CT49) Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 539 Score = 54.7 bits (130), Expect = 9e-08 Identities = 32/80 (40%), Positives = 47/80 (58%) Frame = +2 Query: 74 PTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNSEKRSGIEA 253 PT +Q ++IP + D + + TGSGKTLA+LLPIL ++ + + K G A Sbjct: 161 PTSIQRSTIPNVINNRDFIGVASTGSGKTLAFLLPILIKLHGIP---PLNSITKHDGPLA 217 Query: 254 VVVAPSRELGMQIVREVEKI 313 +V+AP+REL QI E + I Sbjct: 218 LVLAPTRELAQQIQHEGQSI 237
>DDX4_PIG (Q6GWX0) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (VASA-like protein) Length = 722 Score = 54.7 bits (130), Expect = 9e-08 Identities = 34/89 (38%), Positives = 48/89 (53%) Frame = +2 Query: 44 DRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQG 223 + + K G T T VQ SIP+I D + + TGSGKT A+LLPIL+ + + Sbjct: 299 NNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHM--MHDGITAS 356 Query: 224 NSEKRSGIEAVVVAPSRELGMQIVREVEK 310 ++ E ++VAP+REL QI E K Sbjct: 357 RFKELQEPECIIVAPTRELVNQIYLEARK 385
>DED1_SCHPO (O13370) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 636 Score = 54.7 bits (130), Expect = 9e-08 Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 7/97 (7%) Frame = +2 Query: 41 IDRLNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILS---EIGPLKRA 211 + + G T PT VQ SIP+++ D + + TGSGKT +L PILS + GP Sbjct: 181 LQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFPILSLAFDKGPAAVP 240 Query: 212 REQ----GNSEKRSGIEAVVVAPSRELGMQIVREVEK 310 +Q G +++ +++AP+REL QI E K Sbjct: 241 VDQDAGMGYRPRKAYPTTLILAPTRELVCQIHEESRK 277
>SRMB_HAEIN (P44701) ATP-dependent RNA helicase srmB homolog (EC 3.6.1.-)| Length = 439 Score = 54.7 bits (130), Expect = 9e-08 Identities = 34/121 (28%), Positives = 56/121 (46%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L K+G + PT +Q +IP + D + + TG+GKT A+LLP L + R Sbjct: 19 LEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPALQHLLDYPR------- 71 Query: 230 EKRSGIEAVVVAPSRELGMQIVREVEKILGPDDKRLVQQLVGGANRSRQEEALKKNKPII 409 K +V+ P+REL MQ+ + E+ L + + GG + N+ ++ Sbjct: 72 RKPGPPRILVLTPTRELAMQVAEQAEE-LAQFTHLNIATITGGVAYQNHGDVFNTNQDLV 130 Query: 410 V 412 V Sbjct: 131 V 131
>DDX41_HUMAN (Q9UJV9) Probable ATP-dependent RNA helicase DDX41 (EC 3.6.1.-)| (DEAD box protein 41) (DEAD box protein abstrakt homolog) Length = 622 Score = 54.3 bits (129), Expect = 1e-07 Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 5/126 (3%) Frame = +2 Query: 50 LNKEGLTSPTEVQSASIPVISQRHDAVIQSYTGSGKTLAYLLPILSEIGPLKRAREQGNS 229 L K+G+ PT +Q IP I D + ++TGSGKTL + LP++ + L++ + S Sbjct: 196 LKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI--MFCLEQEKRLPFS 253 Query: 230 EKRSGIEAVVVAPSRELGMQ---IVREVEKILGPDDKRLVQ--QLVGGANRSRQEEALKK 394 KR G +++ PSREL Q I+ ++L D L++ +GG + Q E ++ Sbjct: 254 -KREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRH 312 Query: 395 NKPIIV 412 ++V Sbjct: 313 GVHMMV 318 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,699,487 Number of Sequences: 219361 Number of extensions: 864461 Number of successful extensions: 3772 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 3400 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3462 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
