ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet101f07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TPP2_RAT (Q64560) Tripeptidyl-peptidase 2 (EC 3.4.14.10) (Tripep... 28 8.3
2TPP2_HUMAN (P29144) Tripeptidyl-peptidase 2 (EC 3.4.14.10) (Trip... 28 8.3
3TPP2_MOUSE (Q64514) Tripeptidyl-peptidase 2 (EC 3.4.14.10) (Trip... 28 8.3
4U2AF2_CAEEL (P90978) Splicing factor U2AF 65 kDa subunit (U2 aux... 28 8.3

>TPP2_RAT (Q64560) Tripeptidyl-peptidase 2 (EC 3.4.14.10)|
            (Tripeptidyl-peptidase II) (TPP-II) (Tripeptidyl
            aminopeptidase)
          Length = 1248

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = -1

Query: 86   CVELVPLVGWTRCAAW 39
            C++L+ L+GWT CA++
Sbjct: 1217 CIQLMKLLGWTHCASF 1232



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>TPP2_HUMAN (P29144) Tripeptidyl-peptidase 2 (EC 3.4.14.10)|
            (Tripeptidyl-peptidase II) (TPP-II) (Tripeptidyl
            aminopeptidase)
          Length = 1248

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = -1

Query: 86   CVELVPLVGWTRCAAW 39
            C++L+ L+GWT CA++
Sbjct: 1217 CIQLMKLLGWTHCASF 1232



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>TPP2_MOUSE (Q64514) Tripeptidyl-peptidase 2 (EC 3.4.14.10)|
            (Tripeptidyl-peptidase II) (TPP-II) (Tripeptidyl
            aminopeptidase)
          Length = 1261

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 8/16 (50%), Positives = 14/16 (87%)
 Frame = -1

Query: 86   CVELVPLVGWTRCAAW 39
            C++L+ L+GWT CA++
Sbjct: 1230 CIQLMKLLGWTHCASF 1245



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>U2AF2_CAEEL (P90978) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor|
           65 kDa subunit) (U2 snRNP auxiliary factor large
           subunit) (U2AF65)
          Length = 496

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 69  RDELDARQGRQRNNGDQEGGRGGAEAD 149
           RD    R+ R R+ G++ GG GG + D
Sbjct: 67  RDRDTRRRSRSRDRGERRGGGGGGDRD 93


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.313    0.124    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,643,914
Number of Sequences: 219361
Number of extensions: 168082
Number of successful extensions: 467
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 80,573,946
effective HSP length: 52
effective length of database: 69,167,174
effective search space used: 1660012176
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
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