>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  229 bits (585), Expect(2) = 8e-63
 Identities = 114/115 (99%), Positives = 114/115 (99%)
 Frame = +2

Query: 92  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK 271
           MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK
Sbjct: 1   MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK 60

Query: 272 WKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFD 436
           WKGLAYDISDDQQDITRGKGIVDSLFQAPTG GTHEAVLSSYEYVSQGLRKYDFD
Sbjct: 61  WKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFD 115



 Score = 30.0 bits (66), Expect(2) = 8e-63
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = +1

Query: 436 HTMGGFYIAPAFM 474
           +TMGGFYIAPAFM
Sbjct: 116 NTMGGFYIAPAFM 128

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  199 bits (506), Expect(2) = 2e-53
 Identities = 102/117 (87%), Positives = 106/117 (90%), Gaps = 2/117 (1%)
 Frame = +2

Query: 92  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTD- 268
           MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSS  NRF VMA E +DE + TD 
Sbjct: 1   MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSNINRFKVMAKE-LDEGKQTDQ 59

Query: 269 -KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFD 436
            +WKGLAYDISDDQQDITRGKG VDSLFQAPTGDGTHEAVLSSYEY+SQGLR YDFD
Sbjct: 60  DRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFD 116



 Score = 28.9 bits (63), Expect(2) = 2e-53
 Identities = 11/13 (84%), Positives = 13/13 (100%)
 Frame = +1

Query: 436 HTMGGFYIAPAFM 474
           +TMGGFYIAP+FM
Sbjct: 117 NTMGGFYIAPSFM 129

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  170 bits (431), Expect = 2e-42
 Identities = 89/121 (73%), Positives = 103/121 (85%), Gaps = 6/121 (4%)
 Frame = +2

Query: 92  MAAAFSSTVGAPASTPT--NFLGKKLKK-QVTSAVNYHGKSSKAN-RFTVMAAENIDEKR 259
           MAAAFSSTVGAPASTPT  +FLGKKL K QV++AV YHGKSS +N RF  MAA+ +DE +
Sbjct: 1   MAAAFSSTVGAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETK 60

Query: 260 NTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDF 433
            TD  +WKGLAYDISDDQQDITRGKG+VD+LFQAP GDGTH AVLSSY+Y+SQG + Y+F
Sbjct: 61  QTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNF 120

Query: 434 D 436
           D
Sbjct: 121 D 121

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  159 bits (401), Expect(2) = 4e-40
 Identities = 85/119 (71%), Positives = 96/119 (80%), Gaps = 4/119 (3%)
 Frame = +2

Query: 92  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFT-VMAAEN-IDEKRNT 265
           MA+AFSSTVGAPASTPT FLGKK+K        YHG +   +R   VMAA+  +D+ + T
Sbjct: 1   MASAFSSTVGAPASTPTIFLGKKVKNY------YHGGNKMKSRVVRVMAAKKELDQGKQT 54

Query: 266 D--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFD 436
           D  +WKGLAYDISDDQQDITRGKGIVDSLFQAP GDGTHEA+LSSYEY+SQGLRKYDFD
Sbjct: 55  DADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFD 113



 Score = 25.0 bits (53), Expect(2) = 4e-40
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = +1

Query: 436 HTMGGFYIAPAFM 474
           +TM G YIAPAFM
Sbjct: 114 NTMDGLYIAPAFM 126

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  117 bits (294), Expect(2) = 2e-28
 Identities = 63/110 (57%), Positives = 77/110 (70%)
 Frame = +2

Query: 107 SSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLA 286
           S  V APAST   FLGKK    V +   +   + K+N    + A   D++ + D+W+GLA
Sbjct: 23  SGAVSAPAST---FLGKK----VVTVSRFAQSNKKSNGSFKVLAVKEDKQTDGDRWRGLA 75

Query: 287 YDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFD 436
           YD SDDQQDITRGKG+VDS+FQAP G GTH AVLSSYEYVSQGLR+Y+ D
Sbjct: 76  YDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLD 125



 Score = 26.9 bits (58), Expect(2) = 2e-28
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 412 GPAEVRLRHTMGGFYIAPAFM 474
           G  +  L + M GFYIAPAFM
Sbjct: 118 GLRQYNLDNMMDGFYIAPAFM 138

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  115 bits (288), Expect(2) = 7e-28
 Identities = 63/126 (50%), Positives = 83/126 (65%), Gaps = 11/126 (8%)
 Frame = +2

Query: 92  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSK----------ANRFTVMAAE 241
           MAAA+S TVGA    P +  G   +  +  +  + G S K          +  F ++A E
Sbjct: 1   MAAAYS-TVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQE 59

Query: 242 -NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGL 418
            + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP   GTH AV+SSY+Y+SQGL
Sbjct: 60  ISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGL 119

Query: 419 RKYDFD 436
           R+Y+ D
Sbjct: 120 RQYNLD 125



 Score = 27.3 bits (59), Expect(2) = 7e-28
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 412 GPAEVRLRHTMGGFYIAPAFM 474
           G  +  L + M GFYIAPAFM
Sbjct: 118 GLRQYNLDNNMDGFYIAPAFM 138

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  115 bits (288), Expect(2) = 7e-28
 Identities = 63/126 (50%), Positives = 83/126 (65%), Gaps = 11/126 (8%)
 Frame = +2

Query: 92  MAAAFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSK----------ANRFTVMAAE 241
           MAAA+S TVGA    P +  G   +  +  +  + G S K          +  F ++A E
Sbjct: 1   MAAAYS-TVGAVNRAPLSLNGSGARASLVPSTAFFGSSLKKSAAKFPKASSGNFKIVAQE 59

Query: 242 -NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGL 418
            + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP   GTH AV+SSY+Y+SQGL
Sbjct: 60  ISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGL 119

Query: 419 RKYDFD 436
           R+Y+ D
Sbjct: 120 RQYNLD 125



 Score = 27.3 bits (59), Expect(2) = 7e-28
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = +1

Query: 412 GPAEVRLRHTMGGFYIAPAFM 474
           G  +  L + M GFYIAPAFM
Sbjct: 118 GLRQYNLDNNMDGFYIAPAFM 138

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  117 bits (292), Expect(2) = 2e-27
 Identities = 63/112 (56%), Positives = 78/112 (69%), Gaps = 2/112 (1%)
 Frame = +2

Query: 107 SSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDK--WKG 280
           SS+   P+ST   FLG  LKK     VN    +SK +  ++    ++DE + TDK  WKG
Sbjct: 22  SSSASVPSST---FLGSSLKK-----VNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKG 73

Query: 281 LAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFD 436
           LA+D SDDQQDITRGKG VDSLFQAP G GTH A++SSYEY+S GLR+Y+FD
Sbjct: 74  LAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFD 125



 Score = 24.6 bits (52), Expect(2) = 2e-27
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 412 GPAEVRLRHTMGGFYIAPAFM 474
           G  +    + M G+YIAPAFM
Sbjct: 118 GLRQYNFDNNMDGYYIAPAFM 138

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  114 bits (284), Expect(2) = 6e-27
 Identities = 66/125 (52%), Positives = 78/125 (62%), Gaps = 16/125 (12%)
 Frame = +2

Query: 110 STVGAPASTP--------------TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENI 247
           ST+GA   TP              T F GK LKK     V+    ++K+ R  V    ++
Sbjct: 6   STIGAVNKTPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRI-VAEQIDV 64

Query: 248 DEKRNTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLR 421
           D K+ TD  +WKGL  D SDDQQDITRGKG+VDSLFQAPTG GTH AVL SYEYVSQGLR
Sbjct: 65  DPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLR 124

Query: 422 KYDFD 436
           +Y+ D
Sbjct: 125 QYNLD 129



 Score = 25.8 bits (55), Expect(2) = 6e-27
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +1

Query: 412 GPAEVRLRHTMGGFYIAPAFM 474
           G  +  L + + GFYIAPAFM
Sbjct: 122 GLRQYNLDNKLDGFYIAPAFM 142

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  110 bits (275), Expect(2) = 5e-26
 Identities = 62/116 (53%), Positives = 75/116 (64%), Gaps = 4/116 (3%)
 Frame = +2

Query: 101 AFSSTVGAPASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAE--NIDEKRNT--D 268
           + +++V   +   T F GK LKK     V+        NR   +AAE  + D K+ T  D
Sbjct: 17  SLNNSVAGTSVPSTAFFGKTLKKVYGKGVS---SPKVTNRSLRIAAEEKDADPKKQTYSD 73

Query: 269 KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFD 436
           +WKGL  D SDDQQDI RGKG+VDSLFQAPTG GTH AVL SYEYVSQGLR+Y+ D
Sbjct: 74  RWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMD 129



 Score = 26.2 bits (56), Expect(2) = 5e-26
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +1

Query: 412 GPAEVRLRHTMGGFYIAPAFM 474
           G  +  + +T+ GFYIAP+FM
Sbjct: 122 GLRQYNMDNTLDGFYIAPSFM 142

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  111 bits (277), Expect(2) = 3e-25
 Identities = 63/107 (58%), Positives = 75/107 (70%), Gaps = 3/107 (2%)
 Frame = +2

Query: 119 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 289
           GA AS PT+ F G  LKK V S V  + K +  +   V A + I+E + T  D+WKGLAY
Sbjct: 22  GAGASAPTSAFFGTSLKKAVASRVP-NSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAY 80

Query: 290 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYD 430
           DISDDQQDITRGKG+VD LFQAP   GTH AV+SSYEY+S GLR+ D
Sbjct: 81  DISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLRQLD 127



 Score = 22.7 bits (47), Expect(2) = 3e-25
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 427 RLRHTMGGFYIAPAFM 474
           +L +   GFYIAPAF+
Sbjct: 125 QLDNIKDGFYIAPAFL 140

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  107 bits (268), Expect(2) = 1e-24
 Identities = 62/106 (58%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
 Frame = +2

Query: 122 APASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDIS 298
           A AS PT+ FLG  LKK           SS+    TV AAEN  E++NTDKW  LA D S
Sbjct: 23  AGASVPTSGFLGSSLKKHTNVRFP---SSSRTTSMTVKAAEN--EEKNTDKWAHLAKDFS 77

Query: 299 DDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFD 436
           DDQ DI RGKG+VDSLFQAP   GTH  + SS+EY SQGLRKYD D
Sbjct: 78  DDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDID 123



 Score = 23.9 bits (50), Expect(2) = 1e-24
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +1

Query: 442 MGGFYIAPAFM 474
           +G FYIAPAFM
Sbjct: 126 LGDFYIAPAFM 136

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  109 bits (272), Expect(2) = 1e-24
 Identities = 59/109 (54%), Positives = 79/109 (72%), Gaps = 3/109 (2%)
 Frame = +2

Query: 119 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNT--DKWKGLAY 289
           G  AS P++ F G  LKK ++S V  + K +  +   V A + I+E + T  D+W+GLAY
Sbjct: 22  GGGASGPSSAFFGTSLKKVISSRVP-NSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAY 80

Query: 290 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRKYDFD 436
           D+SDDQQDITRGKG+VDSLFQAP   GTH AV+SS++Y+S GLR+Y+FD
Sbjct: 81  DVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFD 129



 Score = 22.3 bits (46), Expect(2) = 1e-24
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = +1

Query: 448 GFYIAPAFM 474
           GFYIAPAF+
Sbjct: 134 GFYIAPAFL 142

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  106 bits (264), Expect(2) = 2e-24
 Identities = 60/127 (47%), Positives = 75/127 (59%), Gaps = 14/127 (11%)
 Frame = +2

Query: 98  AAFSSTVGAPASTP--------------TNFLGKKLKKQVTSAVNYHGKSSKANRFTVMA 235
           AA  ST+GA +  P              T F GK LKK     V+       +NR   + 
Sbjct: 2   AASVSTIGAASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVS---SPKVSNRNLRVV 58

Query: 236 AENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQG 415
           A+ +DE +  D+WKGL  + SDDQQDI RGKG+VDSLFQAPTG GTH A+++SYEYVSQ 
Sbjct: 59  AQEVDETKE-DRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQA 117

Query: 416 LRKYDFD 436
           L+ Y  D
Sbjct: 118 LKTYQLD 124



 Score = 25.0 bits (53), Expect(2) = 2e-24
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +1

Query: 427 RLRHTMGGFYIAPAFM 474
           +L + + GFYIAPAFM
Sbjct: 122 QLDNKLDGFYIAPAFM 137

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  107 bits (267), Expect(2) = 2e-24
 Identities = 61/127 (48%), Positives = 77/127 (60%), Gaps = 14/127 (11%)
 Frame = +2

Query: 98  AAFSSTVGAPASTPTN------------FLGKKLKKQVTSAVNYHGKSSK--ANRFTVMA 235
           AA  ST+GA   T  N            FLG +LK      V+    +SK     F ++A
Sbjct: 2   AATVSTIGAVNRTTLNNSNYGGLVPNSAFLGSRLK------VSSRFTTSKMVTGNFKIVA 55

Query: 236 AENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQG 415
            ++ +++   DKW+GLA+D SDDQQDITRGKG+ D LFQAP G GTH AVLSSYEY+S G
Sbjct: 56  EQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAG 115

Query: 416 LRKYDFD 436
           LR Y +D
Sbjct: 116 LRDYSYD 122



 Score = 23.9 bits (50), Expect(2) = 2e-24
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 436 HTMGGFYIAPAFM 474
           + + GFYIAPAFM
Sbjct: 123 NNVDGFYIAPAFM 135

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score = 57.8 bits (138), Expect(2) = 5e-09
 Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
 Frame = +2

Query: 254 KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLRK 424
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ    
Sbjct: 37  RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS 96

Query: 425 YD 430
           ++
Sbjct: 97  FN 98



 Score = 21.2 bits (43), Expect(2) = 5e-09
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = +1

Query: 448 GFYIAPAFM 474
           GFYI+PAF+
Sbjct: 103 GFYISPAFL 111

>PTR2_CANAL (P46030) Peptide transporter PTR2|
          Length = 623

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 10/59 (16%)
 Frame = -1

Query: 369 PSPVGAWKSESTMPFPLVMSCW----SSEISYAR------PFHLSVFLFSSMFSAAMTV 223
           P+P+ AWK+ S         CW    + E++Y R          ++FL  S FSAA+++
Sbjct: 488 PAPITAWKASSLFILAAAGECWAYTTAYELAYTRSPPALKSLVYALFLVMSAFSAALSL 546

>RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae|
          Length = 209

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 21/85 (24%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
 Frame = +2

Query: 122 APASTPTNFLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISD 301
           +PA+ P+  +G+K++  V+   ++ G   K++   +   +    KR T ++ G  + +SD
Sbjct: 35  SPAADPSLMIGRKVEVPVS---DFTGNFRKSSTMVIFRVKECTGKRCTTEFIG--HKVSD 89

Query: 302 D--QQDITRGKGIVDSLFQAPTGDG 370
           D  ++ + R K  +D +  + T DG
Sbjct: 90  DTIRRMVRRRKERIDIIMPSKTKDG 114

>PTN13_MOUSE (Q64512) Tyrosine-protein phosphatase non-receptor type 13 (EC|
           3.1.3.48) (Protein tyrosine phosphatase PTP-BL)
           (Protein-tyrosine phosphatase RIP) (protein tyrosine
           phosphatase DPZPTP) (PTP36)
          Length = 2453

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +2

Query: 290 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRK 424
           D S   +D  RGKG+            THEA LS   +V++GL K
Sbjct: 195 DRSQAIRDRLRGKGLPTGRSSTSDALDTHEAPLSQQTFVNKGLSK 239

>RT107_YEAST (P38850) Regulator of Ty1 transposition protein 107|
          Length = 1070

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 14/53 (26%), Positives = 28/53 (52%)
 Frame = +2

Query: 200 KSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAP 358
           K  + +   +++ E++  K++TDK+  L   +SD+   I   K  V+S +  P
Sbjct: 688 KQGEESTGKLISTEDVTSKKDTDKFSHLFEGLSDNDDHINDEKPAVNSKYTTP 740

>CASZ1_MOUSE (Q9CWL2) Castor homolog 1 zinc finger protein (Castor-related|
           protein) (Fragment)
          Length = 255

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 68  QGRPSSTEMAAAFSSTVGAPASTPTNFLGKKLKKQV 175
           QG PS     +  +   G+PA  P+ FLGK +K  V
Sbjct: 52  QGNPSLESFLSIKTEAEGSPAGEPSPFLGKAVKALV 87

>DHOM_HELPJ (Q9ZL20) Homoserine dehydrogenase (EC 1.1.1.3) (HDH)|
          Length = 421

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 257 RNTDKWKGLAYDISDDQQDITRGKGI 334
           R+  K KG A++ISDD + +   KGI
Sbjct: 46  RDVKKHKGYAFEISDDLESVIEDKGI 71

>SWC3_ASHGO (Q758T8) SWR1-complex protein 3|
          Length = 688

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
 Frame = +2

Query: 98  AAFSSTVGAPASTPTNF-LGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKW 274
           A  SST GAP      F  G  + K  TSA+  HG  S+      + AE     R   K+
Sbjct: 434 ATLSSTDGAPPLNRRQFPCGIWVTKMQTSALEAHGAISEKGTTITIKAEEGTAPRQKRKY 493

Query: 275 KGLAYDISDDQQDI 316
                ++ D+ + +
Sbjct: 494 TKRKKEVEDEDKSM 507

>TRIPC_HUMAN (Q14669) Thyroid receptor-interacting protein 12 (TRIP12)|
          Length = 1992

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +1

Query: 49  AHPPLLARSTKQHRDGCCLLLHRRGSG 129
           A  P L RST+Q   G C    RRGSG
Sbjct: 315 AELPSLRRSTRQKTTGSCASTSRRGSG 341


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,545,110
Number of Sequences: 219361
Number of extensions: 1092100
Number of successful extensions: 4010
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 3853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4001
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)