ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet101a07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 692 bits (349), Expect = 0.0 Identities = 352/353 (99%) Strand = Plus / Plus Query: 16 tccagcattctcagaccgagtgagcctacttttgggagcacgcaacgcatggctcgcatg 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tccagcattctcagaccgagtgagcctacttttgggagcacgcaacgcatggctcgcatg 60 Query: 76 ggggcgtcggtgctttcgatcctgctcgcctcttgcgccctggcggcggcgagcttcgac 135 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggcgtcggtgctttcgatcctgctcgcctcttgcgccctggcggcggcgagcttcgac 120 Query: 136 aaggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctc 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aaggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctc 180 Query: 196 ctgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctc 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ctgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctc 240 Query: 256 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 300 Query: 316 gcctactacctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 368 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 301 gcctactacctgtcgtcgcagggtccgacgcacgacgagatcgacttcgagtt 353
>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein Length = 1187 Score = 297 bits (150), Expect = 1e-77 Identities = 275/312 (88%), Gaps = 6/312 (1%) Strand = Plus / Plus Query: 63 catggctcgcatgggggcgtcggtgctttcgatcctgctcgcctcttgcgccct---ggc 119 |||||||||||||| || ||||||||| |||||||||| || ||||| ||| | ||| Sbjct: 123 catggctcgcatggcggtgtcggtgctggcgatcctgctggcgtcttgtgccgttgcggc 182 Query: 120 ggcggcgagcttcgacaaggagttcgacgttacctggggtgacgggcgcggcaagatcct 179 |||||||||||||||||||||||||||| | || ||||| ||||| || || |||||||| Sbjct: 183 ggcggcgagcttcgacaaggagttcgacatcacgtggggcgacggccgtggaaagatcct 242 Query: 180 caacaacggccagctcctgacgctgggactggacaaggtctccggctccgggttccagtc 239 |||||| || ||||||||||| ||||| ||||||||| |||||| |||||||||||||| Sbjct: 243 caacaatgggcagctcctgaccctggggctggacaagacctccgggtccgggttccagtc 302 Query: 240 caagcacgagtacctcttcggcaagatcgacatgcagctcaagctcgtc-cccggcaac- 297 ||||| |||||||||||||||||||||||||||||| |||||||||||| || |||||| Sbjct: 303 caagcgcgagtacctcttcggcaagatcgacatgcaactcaagctcgtcgccgggcaact 362 Query: 298 tctgccggcaccgtaaccgcctactacctgtcg-tcgcaggggccgacgcacgacgagat 356 || ||||||||||| |||||||||||||||||| ||| |||| ||||||||||| |||| Sbjct: 363 tccgccggcaccgtcaccgcctactacctgtcgttcgatgggggcgacgcacgacaagat 422 Query: 357 cgacttcgagtt 368 |||||||||||| Sbjct: 423 cgacttcgagtt 434
>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full insert sequence Length = 566 Score = 254 bits (128), Expect = 2e-64 Identities = 206/232 (88%) Strand = Plus / Plus Query: 137 aggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctcc 196 ||||||||||| | |||||||| || || || |||||||||||| | | |||||||| | Sbjct: 196 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 255 Query: 197 tgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctct 256 ||||||| ||||||| | |||||||| |||||||||||||||||||||||||||| Sbjct: 256 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 315 Query: 257 tcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccg 316 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 316 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 375 Query: 317 cctactacctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 368 |||||||| |||||||||||||||||||||| || ||||||||||||||||| Sbjct: 376 cctactacttgtcgtcgcaggggccgacgcatgatgagatcgacttcgagtt 427
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 254 bits (128), Expect = 2e-64 Identities = 206/232 (88%) Strand = Plus / Plus Query: 137 aggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctcc 196 ||||||||||| | |||||||| || || || |||||||||||| | | |||||||| | Sbjct: 186 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 245 Query: 197 tgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctct 256 ||||||| ||||||| | |||||||| |||||||||||||||||||||||||||| Sbjct: 246 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 305 Query: 257 tcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccg 316 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 306 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 365 Query: 317 cctactacctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 368 |||||||| |||||||||||||||||||||| || ||||||||||||||||| Sbjct: 366 cctactacttgtcgtcgcaggggccgacgcatgatgagatcgacttcgagtt 417
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 218 bits (110), Expect = 1e-53 Identities = 140/150 (93%) Strand = Plus / Plus Query: 219 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 278 |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 265 ctccggctccggcttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 324 Query: 279 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 338 ||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||||||| Sbjct: 325 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacctgtcgtcgcaggg 384 Query: 339 gccgacgcacgacgagatcgacttcgagtt 368 | || ||||||||||||||||||||||||| Sbjct: 385 gacggcgcacgacgagatcgacttcgagtt 414
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 210 bits (106), Expect = 2e-51 Identities = 139/150 (92%) Strand = Plus / Plus Query: 219 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 278 |||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||| | Sbjct: 159 ctccggctccggcttccagtccaagaccgaatacctcttcggcaagatcgacatgcagat 218 Query: 279 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 338 ||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||||||| Sbjct: 219 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacctgtcgtcgcaggg 278 Query: 339 gccgacgcacgacgagatcgacttcgagtt 368 | || ||||||||||||||||||||||||| Sbjct: 279 gacggcgcacgacgagatcgacttcgagtt 308
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full insert sequence Length = 1101 Score = 198 bits (100), Expect = 9e-48 Identities = 189/216 (87%), Gaps = 2/216 (0%) Strand = Plus / Plus Query: 154 tggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactggac 213 ||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 194 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 253 Query: 214 aaggtc-tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacat 272 | |||| ||||||||||| |||||||||||| || ||||||| | |||| ||||||| Sbjct: 254 a-ggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacat 312 Query: 273 gcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtc 332 |||| |||||||||||||||||||||| ||||||||||| || ||| |||||||||||| Sbjct: 313 gcagatcaagctcgtccccggcaactccgccggcaccgtcgccaccttctacctgtcgtc 372 Query: 333 gcaggggccgacgcacgacgagatcgacttcgagtt 368 ||||||| || |||||||||||||||||||||||| Sbjct: 373 gcaggggtcgcagcacgacgagatcgacttcgagtt 408
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 194 bits (98), Expect = 1e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 219 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 278 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 261 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 320 Query: 279 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 338 ||||||||||||||||||||| ||||||||||| ||| ||| |||| ||||||||||||| Sbjct: 321 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcaggg 380 Query: 339 gccgacgcacgacgagatcgacttcgagtt 368 |||| ||||| ||||||||||||||||| Sbjct: 381 ttcgacccacgatgagatcgacttcgagtt 410
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 194 bits (98), Expect = 1e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 219 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 278 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 261 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 320 Query: 279 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 338 ||||||||||||||||||||| ||||||||||| ||| ||| |||| ||||||||||||| Sbjct: 321 caagctcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcaggg 380 Query: 339 gccgacgcacgacgagatcgacttcgagtt 368 |||| ||||| ||||||||||||||||| Sbjct: 381 ttcgacccacgatgagatcgacttcgagtt 410
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 190 bits (96), Expect = 2e-45 Identities = 165/188 (87%) Strand = Plus / Minus Query: 137 aggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctcc 196 ||||||||||| | |||||||| || || || |||||||||||| | | |||||||| | Sbjct: 28774036 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 28773977 Query: 197 tgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctct 256 ||||||| ||||||| | |||||||| |||||||||||||||||||||||||||| Sbjct: 28773976 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 28773917 Query: 257 tcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccg 316 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 28773916 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 28773857 Query: 317 cctactac 324 |||||||| Sbjct: 28773856 cctactac 28773849 Score = 147 bits (74), Expect = 3e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 219 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 278 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 28749713 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 28749772 Query: 279 caagctcgtccccggcaactctgccggcaccgtaaccgcctactac 324 ||||||||||||||||||||| ||||||||||| ||| ||| |||| Sbjct: 28749773 caagctcgtccccggcaactccgccggcaccgtcaccaccttctac 28749818 Score = 141 bits (71), Expect = 2e-30 Identities = 139/159 (87%), Gaps = 2/159 (1%) Strand = Plus / Plus Query: 154 tggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactggac 213 ||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 28761428 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 28761487 Query: 214 aaggtc-tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacat 272 | |||| ||||||||||| |||||||||||| || ||||||| | |||| ||||||| Sbjct: 28761488 a-ggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacat 28761546 Query: 273 gcagctcaagctcgtccccggcaactctgccggcaccgt 311 |||| |||||||||||||||||||||| ||||||||||| Sbjct: 28761547 gcagatcaagctcgtccccggcaactccgccggcaccgt 28761585 Score = 69.9 bits (35), Expect = 5e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 326 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 368 |||||||||||||||||||||| || ||||||||||||||||| Sbjct: 28773772 tgtcgtcgcaggggccgacgcatgatgagatcgacttcgagtt 28773730 Score = 63.9 bits (32), Expect = 3e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 325 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 368 ||||||||||||||| || |||||||||||||||||||||||| Sbjct: 28761689 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagtt 28761732 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 326 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 368 ||||||||||||| |||| ||||| ||||||||||||||||| Sbjct: 28749954 tgtcgtcgcagggttcgacccacgatgagatcgacttcgagtt 28749996 Score = 46.1 bits (23), Expect = 0.079 Identities = 23/23 (100%) Strand = Plus / Plus Query: 346 cacgacgagatcgacttcgagtt 368 ||||||||||||||||||||||| Sbjct: 13230402 cacgacgagatcgacttcgagtt 13230424 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 292 ggcaactctgccggcaccgtaaccgcctactac 324 |||||||| ||||||||||| ||| |||||||| Sbjct: 13230243 ggcaactcggccggcaccgtcaccacctactac 13230275
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 190 bits (96), Expect = 2e-45 Identities = 165/188 (87%) Strand = Plus / Minus Query: 137 aggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaacggccagctcc 196 ||||||||||| | |||||||| || || || |||||||||||| | | |||||||| | Sbjct: 81811 aggagttcgacatcacctggggcgatggccgtggcaagatcctcgaggatggccagctgc 81752 Query: 197 tgacgctgggactggacaaggtctccggctccgggttccagtccaagcacgagtacctct 256 ||||||| ||||||| | |||||||| |||||||||||||||||||||||||||| Sbjct: 81751 tgacgctcacgctggacaggacgtccggctcagggttccagtccaagcacgagtacctct 81692 Query: 257 tcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccg 316 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 81691 acggcaagatcgacatgcagctcaagctcgtccccggcaactccgccggcaccgtcaccg 81632 Query: 317 cctactac 324 |||||||| Sbjct: 81631 cctactac 81624 Score = 147 bits (74), Expect = 3e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 219 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 278 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 57488 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 57547 Query: 279 caagctcgtccccggcaactctgccggcaccgtaaccgcctactac 324 ||||||||||||||||||||| ||||||||||| ||| ||| |||| Sbjct: 57548 caagctcgtccccggcaactccgccggcaccgtcaccaccttctac 57593 Score = 141 bits (71), Expect = 2e-30 Identities = 139/159 (87%), Gaps = 2/159 (1%) Strand = Plus / Plus Query: 154 tggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactggac 213 ||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 69203 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 69262 Query: 214 aaggtc-tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacat 272 | |||| ||||||||||| |||||||||||| || ||||||| | |||| ||||||| Sbjct: 69263 a-ggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacat 69321 Query: 273 gcagctcaagctcgtccccggcaactctgccggcaccgt 311 |||| |||||||||||||||||||||| ||||||||||| Sbjct: 69322 gcagatcaagctcgtccccggcaactccgccggcaccgt 69360 Score = 69.9 bits (35), Expect = 5e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 326 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 368 |||||||||||||||||||||| || ||||||||||||||||| Sbjct: 81547 tgtcgtcgcaggggccgacgcatgatgagatcgacttcgagtt 81505 Score = 63.9 bits (32), Expect = 3e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 325 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 368 ||||||||||||||| || |||||||||||||||||||||||| Sbjct: 69464 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagtt 69507 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 326 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 368 ||||||||||||| |||| ||||| ||||||||||||||||| Sbjct: 57729 tgtcgtcgcagggttcgacccacgatgagatcgacttcgagtt 57771
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 186 bits (94), Expect = 3e-44 Identities = 136/150 (90%) Strand = Plus / Plus Query: 219 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 278 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 153 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 212 Query: 279 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 338 |||| |||||||||||||||| ||||||||||| ||| ||| |||| ||||||||||||| Sbjct: 213 caagttcgtccccggcaactccgccggcaccgtcaccaccttctacttgtcgtcgcaggg 272 Query: 339 gccgacgcacgacgagatcgacttcgagtt 368 |||| ||||| ||||||||||||||||| Sbjct: 273 ttcgacccacgatgagatcgacttcgagtt 302
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 170 bits (86), Expect = 2e-39 Identities = 136/150 (90%), Gaps = 2/150 (1%) Strand = Plus / Plus Query: 220 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 279 ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 309 tccggctccgggttccagtcccggcacgagtacctgttcggcaagatcgacatgcagctg 368 Query: 280 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg- 338 ||| || || |||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 369 cggctggtgccgggcaactccgccggcaccgtcaccgcctactacctgtcgtcgcagggc 428 Query: 339 gccgacgcacgacgagatcgacttcgagtt 368 | || ||||||||||||||||||||||||| Sbjct: 429 ggcg-cgcacgacgagatcgacttcgagtt 457
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence Length = 1253 Score = 163 bits (82), Expect = 5e-37 Identities = 184/218 (84%) Strand = Plus / Plus Query: 151 acctggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactg 210 |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| || Sbjct: 204 acctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctgtccatg 263 Query: 211 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 270 |||| | ||||||||| || |||||||||||| | ||||||||| |||| ||||| Sbjct: 264 gacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgac 323 Query: 271 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcg 330 |||||||||||||||||||| || |||| ||||||||||| || ||| ||| || ||| Sbjct: 324 atgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctatctttcg 383 Query: 331 tcgcaggggccgacgcacgacgagatcgacttcgagtt 368 |||||||| || |||||||||||||||||||||||| Sbjct: 384 tcgcagggttcgcagcacgacgagatcgacttcgagtt 421
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete cds Length = 1221 Score = 163 bits (82), Expect = 5e-37 Identities = 184/218 (84%) Strand = Plus / Plus Query: 151 acctggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactg 210 |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| || Sbjct: 211 acctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctgtccatg 270 Query: 211 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 270 |||| | ||||||||| || |||||||||||| | ||||||||| |||| ||||| Sbjct: 271 gacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgac 330 Query: 271 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcg 330 |||||||||||||||||||| || |||| ||||||||||| || ||| ||| || ||| Sbjct: 331 atgcagctcaagctcgtcccgggggactccgccggcaccgtcgccaccttctatctttcg 390 Query: 331 tcgcaggggccgacgcacgacgagatcgacttcgagtt 368 |||||||| || |||||||||||||||||||||||| Sbjct: 391 tcgcagggttcgcagcacgacgagatcgacttcgagtt 428
>dbj|AB196976.1| Sagittaria pygmaea SpXTH3 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1273 Score = 147 bits (74), Expect = 3e-32 Identities = 131/150 (87%) Strand = Plus / Plus Query: 219 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 278 |||||||||||| |||||||||||| |||||||||||| ||||||| |||| |||||| | Sbjct: 322 ctccggctccggcttccagtccaagaacgagtacctctacggcaagctcgatatgcagat 381 Query: 279 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 338 |||||| || ||||| ||||| ||||||||||| ||| ||| |||||| ||||| ||||| Sbjct: 382 caagcttgtacccgggaactcagccggcaccgtcaccaccttctacctctcgtcccaggg 441 Query: 339 gccgacgcacgacgagatcgacttcgagtt 368 || | ||||||||||||||||||||||| Sbjct: 442 ccccaaccacgacgagatcgacttcgagtt 471
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 147 bits (74), Expect = 3e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 219 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 278 ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 150279 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagat 150338 Query: 279 caagctcgtccccggcaactctgccggcaccgtaaccgcctactac 324 ||||||||||||||||||||| ||||||||||| ||| ||| |||| Sbjct: 150339 caagctcgtccccggcaactccgccggcaccgtcaccaccttctac 150384 Score = 141 bits (71), Expect = 2e-30 Identities = 139/159 (87%), Gaps = 2/159 (1%) Strand = Plus / Plus Query: 154 tggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactggac 213 ||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 161994 tggggcgacggccgcggcaagatcctcggcaacggccagctcctgacgctgtcgctggac 162053 Query: 214 aaggtc-tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacat 272 | |||| ||||||||||| |||||||||||| || ||||||| | |||| ||||||| Sbjct: 162054 a-ggtcgtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacat 162112 Query: 273 gcagctcaagctcgtccccggcaactctgccggcaccgt 311 |||| |||||||||||||||||||||| ||||||||||| Sbjct: 162113 gcagatcaagctcgtccccggcaactccgccggcaccgt 162151 Score = 63.9 bits (32), Expect = 3e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 325 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 368 ||||||||||||||| || |||||||||||||||||||||||| Sbjct: 162255 ctgtcgtcgcaggggtcgcagcacgacgagatcgacttcgagtt 162298 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 326 tgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 368 ||||||||||||| |||| ||||| ||||||||||||||||| Sbjct: 150520 tgtcgtcgcagggttcgacccacgatgagatcgacttcgagtt 150562
>dbj|AB196977.1| Sagittaria pygmaea SpXTH4 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1181 Score = 131 bits (66), Expect = 2e-27 Identities = 198/242 (81%) Strand = Plus / Plus Query: 127 agcttcgacaaggagttcgacgttacctggggtgacgggcgcggcaagatcctcaacaac 186 |||||| |||| || |||||| | ||||||||||| || || || |||||||| |||||| Sbjct: 316 agcttcaacaacgatttcgacatcacctggggtgatggccgggggaagatcctaaacaac 375 Query: 187 ggccagctcctgacgctgggactggacaaggtctccggctccgggttccagtccaagcac 246 ||||||||||| | || |||||||| ||||||||| ||||| || || || || Sbjct: 376 ggccagctcctcagcctctccctggacaaaacctccggctcagggtttcaatctaaaaac 435 Query: 247 gagtacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggc 306 |||||||||| ||||| ||||||||||| || |||||||||||||||||||| || || Sbjct: 436 cagtacctctttggcaacatcgacatgcaactgaagctcgtccccggcaactcggctgga 495 Query: 307 accgtaaccgcctactacctgtcgtcgcaggggccgacgcacgacgagatcgacttcgag 366 || || |||||||| ||||| || || ||||| || || ||||||||||||||||| ||| Sbjct: 496 acggtcaccgcctattacctatcctcacagggccctacccacgacgagatcgactttgag 555 Query: 367 tt 368 || Sbjct: 556 tt 557
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 131 bits (66), Expect = 2e-27 Identities = 132/150 (88%), Gaps = 3/150 (2%) Strand = Plus / Plus Query: 220 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 279 |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| || Sbjct: 292 tccggctccgggttccagtccaagagcgagtacctgttcggcaagatcgacatgcagatc 351 Query: 280 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg- 338 ||||| || || |||||||| | ||||| || ||| ||| |||||||||||| ||||| Sbjct: 352 aagctggtgccaggcaactccg-tggcacggtcaccaccttctacctgtcgtcccagggc 410 Query: 339 gccgacgcacgacgagatcgacttcgagtt 368 | || ||||||||||||||||||||||||| Sbjct: 411 gacg-cgcacgacgagatcgacttcgagtt 439
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete cds Length = 1827 Score = 129 bits (65), Expect = 7e-27 Identities = 137/161 (85%) Strand = Plus / Plus Query: 151 acctggggtgacgggcgcggcaagatcctcaacaacggccagctcctgacgctgggactg 210 |||||||| ||||| ||||||||||||||| ||||||||||||||||||||||| || Sbjct: 94 acctggggcgacggccgcggcaagatcctcgacaacggccagctcctgacgctgtccatg 153 Query: 211 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 270 |||| | ||||||||| || |||||||||||| | ||||||||| |||| ||||| Sbjct: 154 gacaggtcctccggctcgggcttccagtccaaggcccagtacctctacggccgcttcgac 213 Query: 271 atgcagctcaagctcgtccccggcaactctgccggcaccgt 311 |||||||||||||||||||| || |||| ||||||||||| Sbjct: 214 atgcagctcaagctcgtcccgggggactccgccggcaccgt 254 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 328 tcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 368 ||||||||||| || |||||||||||||||||||||||| Sbjct: 396 tcgtcgcagggttcgcagcacgacgagatcgacttcgagtt 436
>gb|BT019084.1| Zea mays clone Contig673.F mRNA sequence Length = 977 Score = 123 bits (62), Expect = 4e-25 Identities = 133/154 (86%), Gaps = 2/154 (1%) Strand = Plus / Minus Query: 208 ctggacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatc 267 ||||||| || |||||| |||||||||||||||||| |||||||||| |||||||||||| Sbjct: 936 ctggacagggcctccgggtccgggttccagtccaaggacgagtacctgttcggcaagatc 877 Query: 268 gacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctg 327 || |||||| | ||||| || || |||||||| || |||||||| || ||| |||||| Sbjct: 876 gagatgcagatgaagctggtgcctggcaactcggcgggcaccgtgacgaccttgtacctg 817 Query: 328 tcgtcgcaggg-gccgacgcacgacgagatcgac 360 ||||||||||| | || ||||||||||||||||| Sbjct: 816 tcgtcgcagggcgacg-cgcacgacgagatcgac 784
>gb|AY106776.1| Zea mays PCO076978 mRNA sequence Length = 974 Score = 123 bits (62), Expect = 4e-25 Identities = 133/154 (86%), Gaps = 2/154 (1%) Strand = Plus / Plus Query: 208 ctggacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatc 267 ||||||| || |||||| |||||||||||||||||| |||||||||| |||||||||||| Sbjct: 268 ctggacagggcctccgggtccgggttccagtccaaggacgagtacctgttcggcaagatc 327 Query: 268 gacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctg 327 || |||||| | ||||| || || |||||||| || |||||||| || ||| |||||| Sbjct: 328 gagatgcagatgaagctggtgcctggcaactcggcgggcaccgtgacgaccttgtacctg 387 Query: 328 tcgtcgcaggg-gccgacgcacgacgagatcgac 360 ||||||||||| | || ||||||||||||||||| Sbjct: 388 tcgtcgcagggcgacg-cgcacgacgagatcgac 420
>dbj|AB196978.1| Sagittaria pygmaea SpXTH5 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1029 Score = 103 bits (52), Expect = 4e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 265 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 324 |||||||||||| ||||| ||||||| || ||||| ||||||||||| || ||||||||| Sbjct: 311 atcgacatgcagatcaaggtcgtccctggtaactccgccggcaccgtcacagcctactac 370 Query: 325 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 368 || || || ||||| |||||||||||||||||||||| ||||| Sbjct: 371 ctctcctcccagggaacgacgcacgacgagatcgactttgagtt 414
>ref|NM_118714.3| Arabidopsis thaliana XTR9 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 9); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G25820 (XTR9) mRNA, complete cds Length = 1089 Score = 99.6 bits (50), Expect = 6e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 211 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 270 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 221 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 280 Query: 271 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcg 330 ||| |||||||||| ||| | || |||||||| |||||||| |||||||||||||| ||| Sbjct: 281 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 340 Query: 331 tc 332 || Sbjct: 341 tc 342
>gb|AY093183.1| Arabidopsis thaliana putative xyloglucan endo-1, 4-beta-D-glucanase (At4g25820) mRNA, complete cds Length = 1068 Score = 99.6 bits (50), Expect = 6e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 211 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 270 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 221 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 280 Query: 271 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcg 330 ||| |||||||||| ||| | || |||||||| |||||||| |||||||||||||| ||| Sbjct: 281 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 340 Query: 331 tc 332 || Sbjct: 341 tc 342
>gb|AF093672.1|AF093672 Arabidopsis thaliana xyloglucan endotransglycosylase (XTR9) mRNA, complete cds Length = 1100 Score = 99.6 bits (50), Expect = 6e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 211 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 270 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 210 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 269 Query: 271 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcg 330 ||| |||||||||| ||| | || |||||||| |||||||| |||||||||||||| ||| Sbjct: 270 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 329 Query: 331 tc 332 || Sbjct: 330 tc 331
>gb|BT003385.1| Arabidopsis thaliana putative xyloglucan endo-1, 4-beta-D-glucanase (At4g25820) mRNA, complete cds Length = 901 Score = 99.6 bits (50), Expect = 6e-18 Identities = 104/122 (85%) Strand = Plus / Plus Query: 211 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 270 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 169 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 228 Query: 271 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcg 330 ||| |||||||||| ||| | || |||||||| |||||||| |||||||||||||| ||| Sbjct: 229 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactacctatcg 288 Query: 331 tc 332 || Sbjct: 289 tc 290
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 93.7 bits (47), Expect = 4e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 278 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagg 337 ||||||||||| ||||| |||| ||||||||||| ||||||| |||||||||||||||| Sbjct: 275 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctacctgtcgtcgcaga 334 Query: 338 ggccgacgcacgacgagatcgacttcgagtt 368 || |||||||||||||||||||||||| Sbjct: 335 actcggagcacgacgagatcgacttcgagtt 365
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 93.7 bits (47), Expect = 4e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 278 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagg 337 ||||||||||| ||||| |||| ||||||||||| ||||||| |||||||||||||||| Sbjct: 272 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctacctgtcgtcgcaga 331 Query: 338 ggccgacgcacgacgagatcgacttcgagtt 368 || |||||||||||||||||||||||| Sbjct: 332 actcggagcacgacgagatcgacttcgagtt 362
>emb|AL161564.2|ATCHRIV64 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 64 Length = 196286 Score = 91.7 bits (46), Expect = 1e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 211 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 270 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 18979 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 19038 Query: 271 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 324 ||| |||||||||| ||| | || |||||||| |||||||| |||||||||||| Sbjct: 19039 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactac 19092
>emb|AL049480.1|ATF14M19 Arabidopsis thaliana DNA chromosome 4, BAC clone F14M19 (ESSA project) Length = 91228 Score = 91.7 bits (46), Expect = 1e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 211 gacaaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgac 270 ||||||||||||||||| || || || |||||| | |||||| | || || ||||||||| Sbjct: 27900 gacaaggtctccggctcaggttttcaatccaagaaggagtacttgtttggtaagatcgac 27959 Query: 271 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 324 ||| |||||||||| ||| | || |||||||| |||||||| |||||||||||| Sbjct: 27960 atgaagctcaagcttgtcgctggaaactctgctggcaccgtcaccgcctactac 28013
>dbj|AK058291.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E08, full insert sequence Length = 634 Score = 85.7 bits (43), Expect = 9e-14 Identities = 52/55 (94%) Strand = Plus / Plus Query: 219 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatg 273 ||||||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 251 ctccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatg 305
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 83.8 bits (42), Expect = 4e-13 Identities = 123/150 (82%) Strand = Plus / Plus Query: 219 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 278 ||||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 210 ctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagat 269 Query: 279 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 338 ||||||||||||||| | || ||||||| || || ||| ||||||| | ||| |||| Sbjct: 270 gaagctcgtccccggcgaatcgcccggcacggtcgccaccttctacctgacatcggaggg 329 Query: 339 gccgacgcacgacgagatcgacttcgagtt 368 ||||||||||||||||||||||||| Sbjct: 330 agatgcgcacgacgagatcgacttcgagtt 359
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 83.8 bits (42), Expect = 4e-13 Identities = 123/150 (82%) Strand = Plus / Plus Query: 219 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 278 ||||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 278 ctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagat 337 Query: 279 caagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggg 338 ||||||||||||||| | || ||||||| || || ||| ||||||| | ||| |||| Sbjct: 338 gaagctcgtccccggcgaatcgcccggcacggtcgccaccttctacctgacatcggaggg 397 Query: 339 gccgacgcacgacgagatcgacttcgagtt 368 ||||||||||||||||||||||||| Sbjct: 398 agatgcgcacgacgagatcgacttcgagtt 427
>gb|DQ100338.1| Eucalyptus globulus putative xyloglucan endotransglycosylase/hydrolase (XTH2) mRNA, partial cds Length = 936 Score = 81.8 bits (41), Expect = 1e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 296 actctgccggcaccgtaaccgcctactacctgtcgtcgcaggggccgacgcacgacgaga 355 |||| ||||||||||| ||||| |||||| |||| ||||| |||||||| |||||||||| Sbjct: 1 actccgccggcaccgtgaccgcttactacttgtcttcgcaagggccgactcacgacgaga 60 Query: 356 tcgacttcgagtt 368 | ||||||||||| Sbjct: 61 ttgacttcgagtt 73
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase Length = 1175 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 278 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagg 337 ||||||||||| |||| |||| |||||||| || ||||||| |||||||||||||||| Sbjct: 324 tcaagctcgtcggcggcgactccgccggcacagtcaccgccttctacctgtcgtcgcaga 383 Query: 338 ggccgacgcacgacgagatcgacttcgagtt 368 || |||||||||||||||||||||||| Sbjct: 384 actcggagcacgacgagatcgacttcgagtt 414
>gb|AF223420.1|AF223420 Asparagus officinalis xyloglucan endotransglycosylase XET2 (AoXET2) mRNA, complete cds Length = 1375 Score = 77.8 bits (39), Expect = 2e-11 Identities = 126/155 (81%) Strand = Plus / Plus Query: 214 aaggtctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatg 273 |||| ||| ||||| || ||| |||| | ||||||||| || || || |||||||| ||| Sbjct: 207 aaggcctcgggctcgggcttcgagtctacgcacgagtatctatttggtaagatcgatatg 266 Query: 274 cagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcg 333 ||||||||||| ||||| || || |||||||||||||| || || || || || || || Sbjct: 267 cagctcaagctggtccctggaaattctgccggcaccgttactgcttattatctttcatca 326 Query: 334 caggggccgacgcacgacgagatcgacttcgagtt 368 || ||||| || || || ||||||||||||||||| Sbjct: 327 caagggcctacccatgatgagatcgacttcgagtt 361
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds Length = 1088 Score = 77.8 bits (39), Expect = 2e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 278 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagg 337 ||||||||||| |||| |||| ||||||||||| ||||||| |||||||||||| ||| Sbjct: 285 tcaagctcgtcggcggcgactccgccggcaccgtcaccgccttctacctgtcgtcacaga 344 Query: 338 ggccgacgcacgacgagatcgacttcgagtt 368 || |||||||||||||||||||||||| Sbjct: 345 actcggagcacgacgagatcgacttcgagtt 375
>dbj|AB083025.1| Glycine max mRNA for syringolide-induced protein 19-1-5, complete cds Length = 1221 Score = 73.8 bits (37), Expect = 4e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 223 ggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctcaag 282 ||||| || ||||| |||||| |||| ||||| || ||||| || |||||||| ||||| Sbjct: 266 ggctcgggtttccaatccaagaacgaatacctttttggcaaaattgacatgcaactcaaa 325 Query: 283 ctcgtccccggcaactctgccggcaccgtaaccgcctacta 323 || ||||| ||||||||||| |||||||| || |||||||| Sbjct: 326 ctagtccctggcaactctgctggcaccgtcactgcctacta 366
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 219 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 278 ||||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 32995 ctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagat 32936 Query: 279 caagctcgtccccggc 294 ||||||||||||||| Sbjct: 32935 gaagctcgtccccggc 32920 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 344 cgcacgacgagatcgacttcgagtt 368 ||||||||||||||||||||||||| Sbjct: 32715 cgcacgacgagatcgacttcgagtt 32691
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 71.9 bits (36), Expect = 1e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 219 ctccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagct 278 ||||||||||||||||||||||||| || ||| |||||||||| || || |||| || | Sbjct: 30557287 ctccggctccgggttccagtccaaggaccagttcctcttcggcgagttcagcatggagat 30557228 Query: 279 caagctcgtccccggc 294 ||||||||||||||| Sbjct: 30557227 gaagctcgtccccggc 30557212 Score = 50.1 bits (25), Expect = 0.005 Identities = 25/25 (100%) Strand = Plus / Minus Query: 344 cgcacgacgagatcgacttcgagtt 368 ||||||||||||||||||||||||| Sbjct: 30557007 cgcacgacgagatcgacttcgagtt 30556983 Score = 40.1 bits (20), Expect = 4.9 Identities = 41/48 (85%) Strand = Plus / Minus Query: 264 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgt 311 |||||||||| | ||||||||||| ||| | |||| ||||||||||| Sbjct: 30508619 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgt 30508572
>ref|NM_125136.3| Arabidopsis thaliana XTR3 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 3); hydrolase, acting on glycosyl bonds AT5G57550 (XTR3) mRNA, complete cds Length = 1059 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 256 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 315 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 251 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 310 Query: 316 gcctactac 324 ||||||||| Sbjct: 311 gcctactac 319
>gb|AY143939.1| Arabidopsis thaliana At5g57550/MUA2_12 mRNA, complete cds Length = 855 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 256 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 315 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 214 ttcggaaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 273 Query: 316 gcctactac 324 ||||||||| Sbjct: 274 gcctactac 282
>gb|AY125495.1| Arabidopsis thaliana AT5g57550/MUA2_12 mRNA, complete cds Length = 1060 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 256 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 315 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 251 ttcggaaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 310 Query: 316 gcctactac 324 ||||||||| Sbjct: 311 gcctactac 319
>dbj|AB196975.1| Sagittaria pygmaea SpXTH2 mRNA for xyloglucan endotransglucosylase/hydrolase, partial cds Length = 708 Score = 65.9 bits (33), Expect = 9e-08 Identities = 75/89 (84%) Strand = Plus / Plus Query: 280 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagggg 339 ||||||||||| |||||||| || || ||||| ||| | | |||| |||| || || ||| Sbjct: 8 aagctcgtcccgggcaactccgctggtaccgttaccacattctacttgtcttcccaaggg 67 Query: 340 ccgacgcacgacgagatcgacttcgagtt 368 |||| ||||||||||||||||||||||| Sbjct: 68 ccgaatcacgacgagatcgacttcgagtt 96
>emb|BX833748.1|CNS0A0FK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL74ZH09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1025 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 256 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 315 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 228 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 287 Query: 316 gcctactac 324 ||||||||| Sbjct: 288 gcctactac 296
>dbj|AB011482.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MUA2 Length = 83478 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Minus Query: 256 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 315 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 37112 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 37053 Query: 316 gcctactac 324 ||||||||| Sbjct: 37052 gcctactac 37044
>gb|AF163823.1|AF163823 Arabidopsis thaliana endoxyloglucan transferase (XTR3) gene, complete cds Length = 2703 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 256 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 315 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 1331 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 1390 Query: 316 gcctactac 324 ||||||||| Sbjct: 1391 gcctactac 1399
>gb|U43485.1|ATU43485 Arabidopsis thaliana xyloglucan endotransglycosylase-related protein (XTR3) mRNA, 3' end, partial cds Length = 1017 Score = 65.9 bits (33), Expect = 9e-08 Identities = 60/69 (86%) Strand = Plus / Plus Query: 256 ttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaacc 315 ||||| || ||||||||||||||||| |||||||| || ||||| ||||| ||||| || Sbjct: 193 ttcgggaaaatcgacatgcagctcaaactcgtccctggaaactccgccggaaccgtcact 252 Query: 316 gcctactac 324 ||||||||| Sbjct: 253 gcctactac 261
>ref|NM_113277.1| Arabidopsis thaliana hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT3G23730 mRNA, complete cds Length = 1074 Score = 63.9 bits (32), Expect = 3e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 265 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 324 |||||||||||||| || |||||| |||| ||||| || || ||||| || ||||||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 385 Query: 325 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 368 |||| ||| | || || || ||||||||||| ||||| ||||| Sbjct: 386 ttgtcatcggaaggaccaacacacgacgagatagactttgagtt 429
>gb|AY084449.1| Arabidopsis thaliana clone 10852 mRNA, complete sequence Length = 1076 Score = 63.9 bits (32), Expect = 3e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 265 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 324 |||||||||||||| || |||||| |||| ||||| || || ||||| || ||||||||| Sbjct: 327 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 386 Query: 325 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 368 |||| ||| | || || || ||||||||||| ||||| ||||| Sbjct: 387 ttgtcatcggaaggaccaacacacgacgagatagactttgagtt 430
>dbj|AK175805.1| Arabidopsis thaliana mRNA for putative xyloglucan endotransglycosylase, complete cds, clone: RAFL22-40-A12 Length = 1084 Score = 63.9 bits (32), Expect = 3e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 265 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 324 |||||||||||||| || |||||| |||| ||||| || || ||||| || ||||||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 385 Query: 325 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 368 |||| ||| | || || || ||||||||||| ||||| ||||| Sbjct: 386 ttgtcatcggaaggaccaacacacgacgagatagactttgagtt 429
>dbj|AK175804.1| Arabidopsis thaliana mRNA for putative xyloglucan endotransglycosylase, complete cds, clone: RAFL22-40-A11 Length = 1084 Score = 63.9 bits (32), Expect = 3e-07 Identities = 86/104 (82%) Strand = Plus / Plus Query: 265 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 324 |||||||||||||| || |||||| |||| ||||| || || ||||| || ||||||||| Sbjct: 326 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 385 Query: 325 ctgtcgtcgcaggggccgacgcacgacgagatcgacttcgagtt 368 |||| ||| | || || || ||||||||||| ||||| ||||| Sbjct: 386 ttgtcatcggaaggaccaacacacgacgagatagactttgagtt 429
>gb|AY098522.1| Ananas comosus xyloglucan endotransglycosylase mRNA, partial cds Length = 742 Score = 63.9 bits (32), Expect = 3e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 289 cccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcaggggccgacgcac 348 ||||| || ||||| || ||||| ||| ||| |||| |||||||||| ||| ||| |||| Sbjct: 4 cccgggaattctgcggggaccgtcaccaccttctacttgtcgtcgcaagggtcgatgcac 63 Query: 349 gacgagatcgacttcgagtt 368 ||||||||||| |||||||| Sbjct: 64 gacgagatcgatttcgagtt 83
>gb|L22162.1|SOYMER5HOM Glycine max brassinosteroid-regulated protein mRNA, complete cds Length = 1063 Score = 60.0 bits (30), Expect = 5e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 271 atgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcg 330 ||||||||||||||||| ||||||||||||| ||||| || || || |||||| |||| Sbjct: 261 atgcagctcaagctcgttgccggcaactctgctggcactgtcactgcttactacttgtca 320 Query: 331 tcgcaggggccgacgcacgacgagatcgacttcgagtt 368 || || ||||| || || || ||||| || |||||||| Sbjct: 321 tcccaagggccaacacatgatgagattgatttcgagtt 358
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 280 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagggg 339 ||||||||| |||| |||| || |||||||| || |||| |||||||||||||||| Sbjct: 297 aagctcgtcggcggcgactccgcgggcaccgtcacggccttctacctgtcgtcgcagaac 356 Query: 340 ccgacgcacgacgagatcgacttcgagtt 368 || ||||||||||||||||| |||||| Sbjct: 357 tcggagcacgacgagatcgactccgagtt 385
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 56.0 bits (28), Expect = 8e-05 Identities = 88/108 (81%) Strand = Plus / Plus Query: 220 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 279 ||||||||||| ||| |||||||| | |||||||||||||| || || | | | | | Sbjct: 212 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 271 Query: 280 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctg 327 ||||||||| ||||||||| ||||||||||| ||| ||| ||||||| Sbjct: 272 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 319
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 281 agctcgtccccggcaactctgccggcaccgtaaccgcctactac 324 ||||||||||||||||||| ||||||||||| ||| ||| |||| Sbjct: 10358905 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 10358948 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 345 gcacgacgagatcgacttcgagtt 368 |||||||||||||||||||||||| Sbjct: 10359113 gcacgacgagatcgacttcgagtt 10359136
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 56.0 bits (28), Expect = 8e-05 Identities = 88/108 (81%) Strand = Plus / Plus Query: 220 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 279 ||||||||||| ||| |||||||| | |||||||||||||| || |||| | || | Sbjct: 221 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttcgaggtcaagatg 280 Query: 280 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctg 327 ||||||||| ||||||||| |||||||| || ||| ||| ||||||| Sbjct: 281 aagctcgtcgacggcaactccgccggcacagtcacctccttctacctg 328
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 281 agctcgtccccggcaactctgccggcaccgtaaccgcctactac 324 ||||||||||||||||||| ||||||||||| ||| ||| |||| Sbjct: 1327 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 1370 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 345 gcacgacgagatcgacttcgagtt 368 |||||||||||||||||||||||| Sbjct: 1535 gcacgacgagatcgacttcgagtt 1558
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 281 agctcgtccccggcaactctgccggcaccgtaaccgcctactac 324 ||||||||||||||||||| ||||||||||| ||| ||| |||| Sbjct: 124715 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 124758 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 345 gcacgacgagatcgacttcgagtt 368 |||||||||||||||||||||||| Sbjct: 124923 gcacgacgagatcgacttcgagtt 124946
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 278 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 324 ||||||||||| ||||| |||| ||||||||||| ||||||| |||| Sbjct: 113311 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 113357 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 345 gcacgacgagatcgacttcgagtt 368 |||||||||||||||||||||||| Sbjct: 113473 gcacgacgagatcgacttcgagtt 113496
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 278 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 324 ||||||||||| ||||| |||| ||||||||||| ||||||| |||| Sbjct: 12930 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 12976 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 345 gcacgacgagatcgacttcgagtt 368 |||||||||||||||||||||||| Sbjct: 13092 gcacgacgagatcgacttcgagtt 13115
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 278 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 324 ||||||||||| ||||| |||| ||||||||||| ||||||| |||| Sbjct: 19010113 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 19010159 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 345 gcacgacgagatcgacttcgagtt 368 |||||||||||||||||||||||| Sbjct: 19010275 gcacgacgagatcgacttcgagtt 19010298
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 54.0 bits (27), Expect = 3e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 278 tcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 324 ||||||||||| ||||| |||| ||||||||||| ||||||| |||| Sbjct: 19168762 tcaagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 19168808 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 345 gcacgacgagatcgacttcgagtt 368 |||||||||||||||||||||||| Sbjct: 19168924 gcacgacgagatcgacttcgagtt 19168947
>gb|BT020422.1| Arabidopsis thaliana At4g14130 mRNA, complete cds Length = 870 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 264 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 323 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 216 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 275 Query: 324 cctgtc 329 | |||| Sbjct: 276 cttgtc 281
>ref|NM_117490.2| Arabidopsis thaliana XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7); hydrolase, acting on glycosyl bonds / hydrolase, hydrolyzing O-glycosyl compounds AT4G14130 (XTR7) mRNA, complete cds Length = 1064 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 264 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 323 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 360 Query: 324 cctgtc 329 | |||| Sbjct: 361 cttgtc 366
>gb|AY045865.1| Arabidopsis thaliana putative xyloglucan endotransglycosylase-related protein XTR-7 (At4g14130) mRNA, complete cds Length = 1075 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 264 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 323 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 360 Query: 324 cctgtc 329 | |||| Sbjct: 361 cttgtc 366
>emb|BX841553.1|CNS09YH5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZA10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 975 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 264 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 323 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 279 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 338 Query: 324 cctgtc 329 | |||| Sbjct: 339 cttgtc 344
>gb|AY087282.1| Arabidopsis thaliana clone 33554 mRNA, complete sequence Length = 1060 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 264 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 323 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 301 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 360 Query: 324 cctgtc 329 | |||| Sbjct: 361 cttgtc 366
>gb|U43489.1|ATU43489 Arabidopsis thaliana xyloglucan endotransglycosylase-related protein (XTR7) mRNA, complete cds Length = 979 Score = 52.0 bits (26), Expect = 0.001 Identities = 56/66 (84%) Strand = Plus / Plus Query: 264 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 323 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 216 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 275 Query: 324 cctgtc 329 | |||| Sbjct: 276 cttgtc 281
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 50.1 bits (25), Expect = 0.005 Identities = 91/113 (80%) Strand = Plus / Plus Query: 220 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 279 ||||||||||| ||| | |||||| || |||||||||||||| || || | | | | | Sbjct: 229 tccggctccggcttcaaatccaagaacaagtacctcttcggcgagttcagcgtccggatg 288 Query: 280 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctgtcgtc 332 ||||||||| ||||||||| ||||||||||| ||| ||| ||| ||| |||| Sbjct: 289 aagctcgtcgacggcaactccgccggcaccgtcacctccttctatctgacgtc 341
>emb|Z97335.2|ATFCA0 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 0 Length = 200576 Score = 50.1 bits (25), Expect = 0.005 Identities = 52/61 (85%) Strand = Plus / Minus Query: 264 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 323 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 95873 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 95814 Query: 324 c 324 | Sbjct: 95813 c 95813
>emb|AL161538.2|ATCHRIV38 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 38 Length = 198944 Score = 50.1 bits (25), Expect = 0.005 Identities = 52/61 (85%) Strand = Plus / Minus Query: 264 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctacta 323 |||||| ||||||||||| || ||| |||| ||||| ||||||||||| || || ||||| Sbjct: 35421 gatcgatatgcagctcaaacttgtcgccggaaactcggccggcaccgtcactgcttacta 35362 Query: 324 c 324 | Sbjct: 35361 c 35361
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Plus Query: 280 aagctcgtccccggcaactctgccggcaccgt 311 |||||| ||||||||||||| ||||||||||| Sbjct: 328 aagctcatccccggcaactccgccggcaccgt 359
>dbj|AB196974.1| Sagittaria pygmaea SpXTH1 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1101 Score = 48.1 bits (24), Expect = 0.020 Identities = 24/24 (100%) Strand = Plus / Plus Query: 345 gcacgacgagatcgacttcgagtt 368 |||||||||||||||||||||||| Sbjct: 445 gcacgacgagatcgacttcgagtt 468
>dbj|AP000377.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MYM9 Length = 71178 Score = 48.1 bits (24), Expect = 0.020 Identities = 51/60 (85%) Strand = Plus / Plus Query: 265 atcgacatgcagctcaagctcgtccccggcaactctgccggcaccgtaaccgcctactac 324 |||||||||||||| || |||||| |||| ||||| || || ||||| || ||||||||| Sbjct: 24457 atcgacatgcagcttaaactcgtcgccggtaactccgctggaaccgtcactgcctactac 24516
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 48.1 bits (24), Expect = 0.020 Identities = 30/32 (93%) Strand = Plus / Plus Query: 280 aagctcgtccccggcaactctgccggcaccgt 311 |||||| ||||||||||||| ||||||||||| Sbjct: 353 aagctcatccccggcaactccgccggcaccgt 384
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 46.1 bits (23), Expect = 0.079 Identities = 41/47 (87%) Strand = Plus / Plus Query: 280 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacct 326 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| Sbjct: 284 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacct 330
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 46.1 bits (23), Expect = 0.079 Identities = 41/47 (87%) Strand = Plus / Plus Query: 280 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacct 326 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| Sbjct: 289 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacct 335
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.079 Identities = 41/47 (87%) Strand = Plus / Plus Query: 280 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacct 326 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| Sbjct: 8321957 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacct 8322003
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 46.1 bits (23), Expect = 0.079 Identities = 41/47 (87%) Strand = Plus / Plus Query: 280 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacct 326 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| Sbjct: 280 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacct 326
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 46.1 bits (23), Expect = 0.079 Identities = 23/23 (100%) Strand = Plus / Plus Query: 346 cacgacgagatcgacttcgagtt 368 ||||||||||||||||||||||| Sbjct: 147590 cacgacgagatcgacttcgagtt 147612 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 292 ggcaactctgccggcaccgtaaccgcctactac 324 |||||||| ||||||||||| ||| |||||||| Sbjct: 147431 ggcaactcggccggcaccgtcaccacctactac 147463
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 46.1 bits (23), Expect = 0.079 Identities = 41/47 (87%) Strand = Plus / Plus Query: 280 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacct 326 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| Sbjct: 62066 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacct 62112
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 46.1 bits (23), Expect = 0.079 Identities = 41/47 (87%) Strand = Plus / Plus Query: 280 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacct 326 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| Sbjct: 289 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacct 335
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full insert sequence Length = 1439 Score = 46.1 bits (23), Expect = 0.079 Identities = 23/23 (100%) Strand = Plus / Plus Query: 346 cacgacgagatcgacttcgagtt 368 ||||||||||||||||||||||| Sbjct: 643 cacgacgagatcgacttcgagtt 665 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 292 ggcaactctgccggcaccgtaaccgcctactac 324 |||||||| ||||||||||| ||| |||||||| Sbjct: 589 ggcaactcggccggcaccgtcaccacctactac 621
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 46.1 bits (23), Expect = 0.079 Identities = 41/47 (87%) Strand = Plus / Plus Query: 280 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacct 326 ||||||||| ||||||||| ||||||||||| ||| ||| |||||| Sbjct: 284 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacct 330
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 46.1 bits (23), Expect = 0.079 Identities = 41/47 (87%) Strand = Plus / Plus Query: 287 tccccggcaactctgccggcaccgtaaccgcctactacctgtcgtcg 333 |||| |||||||| || |||||||| ||| ||| ||||||||||||| Sbjct: 374 tcccgggcaactccgcgggcaccgtgacctccttctacctgtcgtcg 420
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Plus Query: 291 cggcaactctgccggcaccgtaaccgcctactacctgtcgtc 332 ||||||||| ||||||||||| ||| ||| ||||||| |||| Sbjct: 307 cggcaactccgccggcaccgtcacctccttctacctgacgtc 348
>gb|DQ382358.1| Glycine max clone pSXET1a xyloglucan endotransglycosylase precursor (XET1) mRNA, partial cds Length = 681 Score = 44.1 bits (22), Expect = 0.31 Identities = 61/74 (82%) Strand = Plus / Plus Query: 247 gagtacctcttcggcaagatcgacatgcagctcaagctcgtccccggcaactctgccggc 306 |||||| | ||||| || || ||||||||||||||||| || || || |||||||| || Sbjct: 354 gagtacttgttcggaaaaattgacatgcagctcaagcttgtgcctggtaactctgctgga 413 Query: 307 accgtaaccgccta 320 || ||||| ||||| Sbjct: 414 acagtaactgccta 427
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 44.1 bits (22), Expect = 0.31 Identities = 37/42 (88%) Strand = Plus / Plus Query: 291 cggcaactctgccggcaccgtaaccgcctactacctgtcgtc 332 ||||||||| ||||||||||| ||| ||| ||||||| |||| Sbjct: 295 cggcaactccgccggcaccgtcacctccttctacctgacgtc 336
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 44.1 bits (22), Expect = 0.31 Identities = 68/81 (83%), Gaps = 3/81 (3%) Strand = Plus / Plus Query: 291 cggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagg-ggccgacg--ca 347 ||||||||| ||||||||||| ||| ||| ||||||| |||| || || ||||| || Sbjct: 296 cggcaactccgccggcaccgtcacctccttctacctgacgtccggggagggcgacgggca 355 Query: 348 cgacgagatcgacttcgagtt 368 ||||||||||||| ||||||| Sbjct: 356 cgacgagatcgacatcgagtt 376
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 44.1 bits (22), Expect = 0.31 Identities = 68/81 (83%), Gaps = 3/81 (3%) Strand = Plus / Plus Query: 291 cggcaactctgccggcaccgtaaccgcctactacctgtcgtcgcagg-ggccgacg--ca 347 ||||||||| ||||||||||| ||| ||| ||||||| |||| || || ||||| || Sbjct: 296 cggcaactccgccggcaccgtcacctccttctacctgacgtccggggagggcgacgggca 355 Query: 348 cgacgagatcgacttcgagtt 368 ||||||||||||| ||||||| Sbjct: 356 cgacgagatcgacatcgagtt 376
>gb|AC128270.3| Rattus norvegicus 12 BAC CH230-48A22 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 236843 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 gctccgggttccagtccaagcacga 248 ||||||||||||||||| ||||||| Sbjct: 90144 gctccgggttccagtcccagcacga 90120
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 258 cggcaagatcgacatgcagctcaag 282 ||||||||||||||||||| ||||| Sbjct: 511026 cggcaagatcgacatgcagatcaag 511050
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 42.1 bits (21), Expect = 1.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 317 cctactacctgtcgtcgcaggggccgacgcacg 349 ||||||||||| |||||||||| ||||||||| Sbjct: 3516272 cctactacctgcggtcgcagggggcgacgcacg 3516304
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 gacgagatcgacttcgagtt 368 |||||||||||||||||||| Sbjct: 99415 gacgagatcgacttcgagtt 99434
>ref|XM_479512.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1287 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ggctcgcatgggggcgtcggtgct 89 ||||||||||||||||||| |||| Sbjct: 230 ggctcgcatgggggcgtcgctgct 253
>ref|XM_507412.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1167_G06.113 mRNA Length = 1304 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ggctcgcatgggggcgtcggtgct 89 ||||||||||||||||||| |||| Sbjct: 232 ggctcgcatgggggcgtcgctgct 255
>ref|XM_506566.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1167_G06.113 mRNA Length = 1291 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ggctcgcatgggggcgtcggtgct 89 ||||||||||||||||||| |||| Sbjct: 234 ggctcgcatgggggcgtcgctgct 257
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 40.1 bits (20), Expect = 4.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 264 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgt 311 |||||||||| | ||||||||||| ||| | |||| ||||||||||| Sbjct: 228 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgt 275
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gcgcggcaagatcctcaaca 184 |||||||||||||||||||| Sbjct: 578416 gcgcggcaagatcctcaaca 578435
>gb|AC166334.8| Mus musculus chromosome 7, clone RP23-470P9, complete sequence Length = 171861 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 ggctccgggttccagtccaagcac 246 ||||||||||||||| |||||||| Sbjct: 108026 ggctccgggttccagcccaagcac 108003
>gb|AE009201.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 227 of 256 of the complete sequence Length = 11399 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 cggcgagcttcgacaaggagttcg 145 ||||||||||||||||||| |||| Sbjct: 4271 cggcgagcttcgacaaggatttcg 4294
>gb|AC157552.10| Mus musculus chromosome 7, clone RP23-89C10, complete sequence Length = 195587 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 223 ggctccgggttccagtccaagcac 246 ||||||||||||||| |||||||| Sbjct: 17463 ggctccgggttccagcccaagcac 17440
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 gacgagatcgacttcgagtt 368 |||||||||||||||||||| Sbjct: 944218 gacgagatcgacttcgagtt 944237
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gcgcggcaagatcctcaaca 184 |||||||||||||||||||| Sbjct: 1970047 gcgcggcaagatcctcaaca 1970028
>emb|X66125.1|OSPER O.sativa mRNA for peroxidase Length = 1287 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ggctcgcatgggggcgtcggtgct 89 ||||||||||||||||||| |||| Sbjct: 183 ggctcgcatgggggcgtcgctgct 206
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 40.1 bits (20), Expect = 4.9 Identities = 41/48 (85%) Strand = Plus / Minus Query: 264 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgt 311 |||||||||| | ||||||||||| ||| | |||| ||||||||||| Sbjct: 141996 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgt 141949
>emb|AJ421977.1|SMA421977 Stenotrophomonas maltophilia partial parE gene for topoisomerase IV, strain sm199 Length = 480 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gcgcggcaagatcctcaaca 184 |||||||||||||||||||| Sbjct: 129 gcgcggcaagatcctcaaca 148
>emb|AJ421975.1|SMA421975 Stenotrophomonas maltophilia partial parE gene for topoisomerase IV, strain sm8 Length = 480 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gcgcggcaagatcctcaaca 184 |||||||||||||||||||| Sbjct: 129 gcgcggcaagatcctcaaca 148
>emb|AJ421974.1|SMA421974 Stenotrophomonas maltophilia partial parE gene for topoisomerase IV, strain sm117 Length = 480 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gcgcggcaagatcctcaaca 184 |||||||||||||||||||| Sbjct: 129 gcgcggcaagatcctcaaca 148
>emb|AJ421973.1|SMA421973 Stenotrophomonas maltophilia partial parE gene for topoisomerase IV, strain sm98 Length = 480 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gcgcggcaagatcctcaaca 184 |||||||||||||||||||| Sbjct: 129 gcgcggcaagatcctcaaca 148
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gcgcggcaagatcctcaaca 184 |||||||||||||||||||| Sbjct: 636185 gcgcggcaagatcctcaaca 636204
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gcgcggcaagatcctcaaca 184 |||||||||||||||||||| Sbjct: 338395 gcgcggcaagatcctcaaca 338376
>gb|AE012271.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 179 of 460 of the complete genome Length = 10028 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gcgcggcaagatcctcaaca 184 |||||||||||||||||||| Sbjct: 1720 gcgcggcaagatcctcaaca 1701
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 cggcgagcttcgacaaggagttcg 145 ||||||||||||||||||| |||| Sbjct: 2519732 cggcgagcttcgacaaggatttcg 2519755
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 gcgcggcaagatcctcaaca 184 |||||||||||||||||||| Sbjct: 3067621 gcgcggcaagatcctcaaca 3067640
>gb|AF232237.1|AF232237 Agrobacterium tumefaciens SAICAR synthetase (purC) gene, partial cds; and TetR family bacterial regulatory protein (ameR), membrane fusion protein (ameA), multidrug efflux transporter RND family protein (ameB), and outer membrane protein (ameC) genes, complete cds Length = 7277 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 122 cggcgagcttcgacaaggagttcg 145 ||||||||||||||||||| |||| Sbjct: 119 cggcgagcttcgacaaggatttcg 142
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ggctcgcatgggggcgtcggtgct 89 ||||||||||||||||||| |||| Sbjct: 28620405 ggctcgcatgggggcgtcgctgct 28620428
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 gacgagatcgacttcgagtt 368 |||||||||||||||||||| Sbjct: 944216 gacgagatcgacttcgagtt 944235
>dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1167_G06 Length = 112386 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ggctcgcatgggggcgtcggtgct 89 ||||||||||||||||||| |||| Sbjct: 86363 ggctcgcatgggggcgtcgctgct 86386
>dbj|AK104710.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F01, full insert sequence Length = 1287 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ggctcgcatgggggcgtcggtgct 89 ||||||||||||||||||| |||| Sbjct: 230 ggctcgcatgggggcgtcgctgct 253
>dbj|AK099651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065F24, full insert sequence Length = 872 Score = 40.1 bits (20), Expect = 4.9 Identities = 41/48 (85%) Strand = Plus / Minus Query: 264 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgt 311 |||||||||| | ||||||||||| ||| | |||| ||||||||||| Sbjct: 323 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgt 276
>dbj|AK099382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069K12, full insert sequence Length = 1290 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ggctcgcatgggggcgtcggtgct 89 ||||||||||||||||||| |||| Sbjct: 233 ggctcgcatgggggcgtcgctgct 256
>dbj|AK073730.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058F24, full insert sequence Length = 1123 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 gacgagatcgacttcgagtt 368 |||||||||||||||||||| Sbjct: 355 gacgagatcgacttcgagtt 374
>dbj|AK073202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023C17, full insert sequence Length = 1303 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ggctcgcatgggggcgtcggtgct 89 ||||||||||||||||||| |||| Sbjct: 231 ggctcgcatgggggcgtcgctgct 254
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gcgcggcaagatcctcaaca 184 |||||||||||||||||||| Sbjct: 5273940 gcgcggcaagatcctcaaca 5273921
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full insert sequence Length = 1041 Score = 40.1 bits (20), Expect = 4.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 264 gatcgacatgcagctcaagctcgtccccggcaactctgccggcaccgt 311 |||||||||| | ||||||||||| ||| | |||| ||||||||||| Sbjct: 291 gatcgacatggacatcaagctcgtcgccgacgactccgccggcaccgt 338
>tpe|BN000640.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx111 gene for class III peroxidase 111 precursor, exons 1-4 Length = 1250 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ggctcgcatgggggcgtcggtgct 89 ||||||||||||||||||| |||| Sbjct: 162 ggctcgcatgggggcgtcgctgct 185
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gcgcggcaagatcctcaaca 184 |||||||||||||||||||| Sbjct: 5587812 gcgcggcaagatcctcaaca 5587793
>gb|AF014467.1|AF014467 Oryza sativa peroxidase (POX22.3) mRNA, complete cds Length = 1306 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 66 ggctcgcatgggggcgtcggtgct 89 ||||||||||||||||||| |||| Sbjct: 205 ggctcgcatgggggcgtcgctgct 228
>emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on chromosome 9, complete sequence Length = 192913 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ccatccagcattctcagacc 32 |||||||||||||||||||| Sbjct: 68495 ccatccagcattctcagacc 68514
>gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosome 9, complete sequence Length = 219361 Score = 40.1 bits (20), Expect = 4.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ccatccagcattctcagacc 32 |||||||||||||||||||| Sbjct: 56171 ccatccagcattctcagacc 56190
>gb|DQ279095.1| Rosa x borboniana xyloglucan endotransglucosylase hydrolase mRNA, complete cds Length = 1130 Score = 40.1 bits (20), Expect = 4.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 gcacgacgagatcgacttcgagtt 368 |||||| ||||||||||||||||| Sbjct: 353 gcacgatgagatcgacttcgagtt 376 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,922,003 Number of Sequences: 3902068 Number of extensions: 1922003 Number of successful extensions: 35641 Number of sequences better than 10.0: 135 Number of HSP's better than 10.0 without gapping: 136 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 34787 Number of HSP's gapped (non-prelim): 831 length of query: 368 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 346 effective length of database: 17,147,199,772 effective search space: 5932931121112 effective search space used: 5932931121112 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
