| Clone Name | baet101a02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC137741.5| Homo sapiens chromosome 8, clone CTD-2059D3, complete sequence Length = 117100 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Minus Query: 93 caggccccgctgagccacacct 114 |||||||||||||||||||||| Sbjct: 16264 caggccccgctgagccacacct 16243
>dbj|AP006543.1| Homo sapiens genomic DNA, chromosome 8p12, clone: KB1250F11, complete sequence Length = 98657 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 caggccccgctgagccacacct 114 |||||||||||||||||||||| Sbjct: 56180 caggccccgctgagccacacct 56201
>dbj|AP006180.2| Homo sapiens genomic DNA, chromosome 8p12, clone: KB1746H11, complete sequence Length = 26842 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 93 caggccccgctgagccacacct 114 |||||||||||||||||||||| Sbjct: 3282 caggccccgctgagccacacct 3303
>gb|AC005348.1| Homo sapiens chromosome 5, BAC clone 118L13 (LBNL H176), complete sequence Length = 84132 Score = 42.1 bits (21), Expect = 0.76 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 cttcctcgtacccacagccac 158 ||||||||||||||||||||| Sbjct: 726 cttcctcgtacccacagccac 746
>gb|AY111915.1| Zea mays CL12505_1 mRNA sequence Length = 596 Score = 42.1 bits (21), Expect = 0.76 Identities = 24/25 (96%) Strand = Plus / Plus Query: 200 atccagcgattcaagaacaccatca 224 |||||||| |||||||||||||||| Sbjct: 249 atccagcgcttcaagaacaccatca 273
>emb|AL928601.6| Mouse DNA sequence from clone RP23-88B5 on chromosome 11, complete sequence Length = 55129 Score = 42.1 bits (21), Expect = 0.76 Identities = 21/21 (100%) Strand = Plus / Minus Query: 121 taagatacaccagcattcttc 141 ||||||||||||||||||||| Sbjct: 14591 taagatacaccagcattcttc 14571
>dbj|AK085199.1| Mus musculus 13 days embryo stomach cDNA, RIKEN full-length enriched library, clone:D530008E22 product:unclassifiable, full insert sequence Length = 2475 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ttctttctgctcacttccgt 78 |||||||||||||||||||| Sbjct: 2004 ttctttctgctcacttccgt 2023
>gb|AC119995.22| Mus musculus chromosome 3, clone RP24-120B18, complete sequence Length = 182140 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 59 ttctttctgctcacttccgt 78 |||||||||||||||||||| Sbjct: 27489 ttctttctgctcacttccgt 27470
>emb|AL691485.9| Mouse DNA sequence from clone RP23-26D14 on chromosome 3, complete sequence Length = 67491 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ttctttctgctcacttccgt 78 |||||||||||||||||||| Sbjct: 46564 ttctttctgctcacttccgt 46583 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,571,969 Number of Sequences: 3902068 Number of extensions: 1571969 Number of successful extensions: 25624 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 25615 Number of HSP's gapped (non-prelim): 9 length of query: 233 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 211 effective length of database: 17,147,199,772 effective search space: 3618059151892 effective search space used: 3618059151892 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)