>emb|AL954314.8| Zebrafish DNA sequence from clone XX-162M2 in linkage group 25,
             complete sequence
          Length = 81294

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 195   taccagaaaacgaactcctccatcaga 221
             |||||||||| ||||||||||||||||
Sbjct: 62518 taccagaaaatgaactcctccatcaga 62544

>gb|AC135019.3| Mus musculus BAC clone RP23-186D15 from 10, complete sequence
          Length = 189457

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 162    attctgccttgtcctgctgcct 183
              ||||||||||||||||||||||
Sbjct: 117991 attctgccttgtcctgctgcct 117970

>emb|AL139130.28| Human DNA sequence from clone RP11-139I14 on chromosome 1 Contains the
             3' end of the RHBG gene for Rhesus blood group B
             glycoprotein, a novel gene, the gene for transcriptional
             activator of the c-fos promoter (CROC4) and two CpG
             islands, complete sequence
          Length = 61145

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 63    ggtctctgtctgtcccctcct 83
             |||||||||||||||||||||
Sbjct: 52045 ggtctctgtctgtcccctcct 52025

>gb|AC011387.5| Homo sapiens chromosome 5 clone CTB-168B7, complete sequence
          Length = 164055

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 75     tcccctccttcttcctccctt 95
              |||||||||||||||||||||
Sbjct: 153231 tcccctccttcttcctccctt 153211

>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete
             sequence
          Length = 165394

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 349   tatattccgcacatgtgcagcaacc 373
             |||||| ||||||||||||||||||
Sbjct: 81384 tatattgcgcacatgtgcagcaacc 81360

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 349      tatattccgcacatgtgcagcaacc 373
                |||||| ||||||||||||||||||
Sbjct: 19453518 tatattgcgcacatgtgcagcaacc 19453494

>gb|AC016673.5| Homo sapiens BAC clone RP11-17N4 from 2, complete sequence
          Length = 185332

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 69     tgtctgtcccctccttcttcc 89
              |||||||||||||||||||||
Sbjct: 165182 tgtctgtcccctccttcttcc 165162

>emb|BX005279.12| Mouse DNA sequence from clone RP23-321B15 on chromosome X, complete
             sequence
          Length = 222627

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                          
Query: 67    tctgtctgtc-ccctccttcttcctccct 94
             |||||||||| ||||||||||||||||||
Sbjct: 76113 tctgtctgtctccctccttcttcctccct 76085

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 349      tatattccgcacatgtgcagcaacc 373
                |||||| ||||||||||||||||||
Sbjct: 19464794 tatattgcgcacatgtgcagcaacc 19464770

>ref|XM_466002.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 183

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 76  cccctccttcttcctccctt 95
           ||||||||||||||||||||
Sbjct: 155 cccctccttcttcctccctt 136

>gb|AC125328.4| Mus musculus BAC clone RP23-181J14 from chromosome 15, complete
             sequence
          Length = 199674

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   ccatgggaagtcaatgcttt 415
             ||||||||||||||||||||
Sbjct: 37080 ccatgggaagtcaatgcttt 37099

>gb|AC127695.3| Mus musculus BAC clone RP23-310B17 from 17, complete sequence
          Length = 172891

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 196   accagaaaacgaactcctccatca 219
             ||||||||| ||||||||||||||
Sbjct: 96232 accagaaaaggaactcctccatca 96209

>gb|AC151527.13| Medicago truncatula clone mth2-135i19, complete sequence
          Length = 132470

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 337   ttatcttcacattatattcc 356
             ||||||||||||||||||||
Sbjct: 10800 ttatcttcacattatattcc 10781

>gb|AC149636.14| Medicago truncatula clone mth2-180a12, complete sequence
          Length = 139348

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 337   ttatcttcacattatattcc 356
             ||||||||||||||||||||
Sbjct: 44257 ttatcttcacattatattcc 44238

>gb|AC069528.10| Homo sapiens 3 BAC RP11-329N15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163163

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     tcccctccttcttcctccct 94
              ||||||||||||||||||||
Sbjct: 135534 tcccctccttcttcctccct 135553

>emb|AL645587.9| Mouse DNA sequence from clone RP23-171O15 on chromosome 13 Contains
             part of a novel gene, complete sequence
          Length = 150986

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   tacccgtaccagtaccagaa 202
             ||||||||||||||||||||
Sbjct: 97181 tacccgtaccagtaccagaa 97162

>emb|AL671973.13| Mouse DNA sequence from clone RP23-334J9 on chromosome 11 Contains a
             nucleolin (Ncl) pseudogene, complete sequence
          Length = 104321

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    gtctctgtctgtcccctcct 83
             ||||||||||||||||||||
Sbjct: 89952 gtctctgtctgtcccctcct 89933

>gb|AC097507.2| Homo sapiens BAC clone RP11-371E22 from 4, complete sequence
          Length = 167032

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    ctgcagtgcaacggcgccat 304
              ||||||||||||||||||||
Sbjct: 112032 ctgcagtgcaacggcgccat 112013

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 76       cccctccttcttcctccctt 95
                ||||||||||||||||||||
Sbjct: 19004537 cccctccttcttcctccctt 19004518

>gb|AC154849.2| Mus musculus BAC clone RP23-35P8 from chromosome 13, complete sequence
          Length = 200650

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     cctccttcttcctccctttg 97
              ||||||||||||||||||||
Sbjct: 181765 cctccttcttcctccctttg 181746

>gb|AC027290.31| Homo sapiens 12 BAC RP11-463O12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 177332

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 72    ctgtcccctccttcttcctccctt 95
             |||||||||||| |||||||||||
Sbjct: 11364 ctgtcccctcctccttcctccctt 11341

>gb|AC010149.8| Homo sapiens BAC clone RP11-395A23 from 2, complete sequence
          Length = 172132

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     tcccctccttcttcctccct 94
              ||||||||||||||||||||
Sbjct: 143576 tcccctccttcttcctccct 143595

>gb|AC068539.8| Homo sapiens BAC clone RP11-145M22 from 2, complete sequence
          Length = 80775

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 71    tctgtcccctccttcttcctccct 94
             ||||||||||||||||| ||||||
Sbjct: 29367 tctgtcccctccttcttgctccct 29390

>dbj|AP005842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0003H22
          Length = 68256

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    cccctccttcttcctccctt 95
             ||||||||||||||||||||
Sbjct: 59858 cccctccttcttcctccctt 59839

>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0047A17
          Length = 149142

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    cccctccttcttcctccctt 95
             ||||||||||||||||||||
Sbjct: 10058 cccctccttcttcctccctt 10039

>dbj|AP001827.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-236L10, complete
             sequence
          Length = 167639

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 77    ccctccttcttcctcccttt 96
             ||||||||||||||||||||
Sbjct: 69745 ccctccttcttcctcccttt 69764

>emb|AL935133.11| Mouse DNA sequence from clone RP23-70C14 on chromosome 2, complete
             sequence
          Length = 105813

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 75    tcccctccttcttcctccct 94
             ||||||||||||||||||||
Sbjct: 69448 tcccctccttcttcctccct 69467

>gb|AC127583.4| Mus musculus BAC clone RP24-121M11 from 13, complete sequence
          Length = 152618

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     cctccttcttcctccctttg 97
              ||||||||||||||||||||
Sbjct: 130808 cctccttcttcctccctttg 130827

>gb|AC122506.4| Mus musculus BAC clone RP24-426J4 from 15, complete sequence
          Length = 166555

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 396   ccatgggaagtcaatgcttt 415
             ||||||||||||||||||||
Sbjct: 88577 ccatgggaagtcaatgcttt 88558

>emb|AL844564.14| Mouse DNA sequence from clone RP23-400D4 on chromosome 11, complete
              sequence
          Length = 196136

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 77     ccctccttcttcctcccttt 96
              ||||||||||||||||||||
Sbjct: 172335 ccctccttcttcctcccttt 172354


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,552,137
Number of Sequences: 3902068
Number of extensions: 3552137
Number of successful extensions: 72623
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 72509
Number of HSP's gapped (non-prelim): 115
length of query: 450
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 428
effective length of database: 17,147,199,772
effective search space: 7339001502416
effective search space used: 7339001502416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)