ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet100g06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete ... 894 0.0
2gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete ... 894 0.0
3gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete ... 894 0.0
4emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin 797 0.0
5emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clo... 765 0.0
6emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clo... 595 e-167
7gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, comple... 581 e-163
8emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clo... 545 e-152
9emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clo... 539 e-150
10emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clo... 351 1e-93
11gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, comple... 311 1e-81
12dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds 192 8e-46
13dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds 192 8e-46
14dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, compl... 113 6e-22
15emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene 80 8e-12
16emb|X70665.1|TAPURB1A T.aestivum mRNA for alpha1-thionin 80 8e-12
17emb|X96448.1|TAPURD1 T.aestivum Pur-D1 gene 80 8e-12
18gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precur... 80 8e-12
19dbj|D84390.1|WHTA1P Wheat gene for alpha-1 purothionin, exon1-3,... 80 8e-12
20dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, compl... 80 8e-12
21emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene 72 2e-09
22emb|Z13008.1|HVBHORD H.vulgare mRNA for beta-hordothionin 62 2e-06
23emb|X05901.1|HVTH1AR Barley mRNA for toxin alpha-hordothionin 58 3e-05
24gb|M23080.1|BLYHORA Hordeum vulgare alpha-hordothionin (Hth-1) g... 58 3e-05
25emb|X96446.1|TACSPUR1B T.aestivum Pur-B1 gene, cultivar Chinese ... 56 1e-04
26emb|X70666.1|TAPURD1A T.aestivum mRNA for alpha2-purothionin 56 1e-04
27gb|AC121276.9| Mus musculus chromosome 1, clone RP24-249B16, com... 42 1.7
28gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complet... 42 1.7
29ref|NG_005425.2| Homo sapiens PHF5A pseudogene 6 (LOC450250) on ... 40 6.7
30gb|AC133193.3| Mus musculus BAC clone RP23-396L1 from chromosome... 40 6.7
31gb|AC015712.10| Homo sapiens chromosome 15, clone RP11-66B24, co... 40 6.7
32emb|AL161899.21| Human DNA sequence from clone RP11-418I10 on ch... 40 6.7
33emb|AL139801.17| Human DNA sequence from clone RP11-247M1 on chr... 40 6.7
34emb|AL928931.15| Mouse DNA sequence from clone RP23-419H3 on chr... 40 6.7
35dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 40 6.7
36gb|AC026427.4| Homo sapiens chromosome 5 clone CTD-2193P3, compl... 40 6.7
37gb|AC097482.2| Homo sapiens BAC clone RP11-131L11 from 4, comple... 40 6.7
38gb|AC008518.3|AC008518 Homo sapiens chromosome 5 clone CTC-459I6... 40 6.7
39dbj|BS000023.1| Pan troglodytes chromosome 22 clone:PTB-018G23, ... 40 6.7
40emb|AL669974.6| Mouse DNA sequence from clone RP23-229E11 on chr... 40 6.7

>gb|M19048.1|BLYTHNC Barley leaf specific thionin mRNA, complete cds, clone pKG1940
          Length = 663

 Score =  894 bits (451), Expect = 0.0
 Identities = 463/467 (99%)
 Strand = Plus / Plus

                                                                       
Query: 21  tctcattctacttgagaaattaaggccaaccagccaaccatggcaaccaacaagagtatt 80
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5   tctcattctacttgagaaattaaggccaaccagccaaccatggcaaccaacaagagtatt 64

                                                                       
Query: 81  aagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  aagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaa 124

                                                                       
Query: 141 ggcaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgcc 200
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 125 gccaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgct 184

                                                                       
Query: 201 ggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaaca 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaaca 244

                                                                       
Query: 261 tgtcctagggactatcctaagctgaatcttctccctgaatccggtgaaccaaatgcgact 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tgtcctagggactatcctaagctgaatcttctccctgaatccggtgaaccaaatgcgact 304

                                                                       
Query: 321 gagtactgcacaattggatgcaggacttccgtttgtgacaacatggacaatgtttcccgt 380
           ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 305 gagtactgcacaattggatgccggacttccgtctgtgacaacatggacaatgtttcccgt 364

                                                                       
Query: 381 ggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaat 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaat 424

                                                          
Query: 441 gatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgg 487
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgg 471



to top

>gb|M19047.1|BLYTHNB Barley leaf specific thionin mRNA, complete cds, clone pKG1348
          Length = 608

 Score =  894 bits (451), Expect = 0.0
 Identities = 463/467 (99%)
 Strand = Plus / Plus

                                                                       
Query: 21  tctcattctacttgagaaattaaggccaaccagccaaccatggcaaccaacaagagtatt 80
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5   tctcattctacttgagaaattaaggccaaccagccaaccatggcaaccaacaagagtatt 64

                                                                       
Query: 81  aagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  aagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaa 124

                                                                       
Query: 141 ggcaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgcc 200
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 125 gccaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgct 184

                                                                       
Query: 201 ggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaaca 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaaca 244

                                                                       
Query: 261 tgtcctagggactatcctaagctgaatcttctccctgaatccggtgaaccaaatgcgact 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tgtcctagggactatcctaagctgaatcttctccctgaatccggtgaaccaaatgcgact 304

                                                                       
Query: 321 gagtactgcacaattggatgcaggacttccgtttgtgacaacatggacaatgtttcccgt 380
           ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 305 gagtactgcacaattggatgccggacttccgtctgtgacaacatggacaatgtttcccgt 364

                                                                       
Query: 381 ggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaat 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaat 424

                                                          
Query: 441 gatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgg 487
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgg 471



to top

>gb|M19046.1|BLYTHNA Barley leaf specific thionin mRNA, complete cds, clone pKG2872
          Length = 540

 Score =  894 bits (451), Expect = 0.0
 Identities = 463/467 (99%)
 Strand = Plus / Plus

                                                                       
Query: 21  tctcattctacttgagaaattaaggccaaccagccaaccatggcaaccaacaagagtatt 80
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5   tctcattctacttgagaaattaaggccaaccagccaaccatggcaaccaacaagagtatt 64

                                                                       
Query: 81  aagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaa 140
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  aagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaa 124

                                                                       
Query: 141 ggcaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgcc 200
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 125 gccaagagttgctgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgct 184

                                                                       
Query: 201 ggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaaca 260
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ggtggttcccgaccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaaca 244

                                                                       
Query: 261 tgtcctagggactatcctaagctgaatcttctccctgaatccggtgaaccaaatgcgact 320
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tgtcctagggactatcctaagctgaatcttctccctgaatccggtgaaccaaatgcgact 304

                                                                       
Query: 321 gagtactgcacaattggatgcaggacttccgtttgtgacaacatggacaatgtttcccgt 380
           ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 305 gagtactgcacaattggatgccggacttccgtctgtgacaacatggacaatgtttcccgt 364

                                                                       
Query: 381 ggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaat 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaat 424

                                                          
Query: 441 gatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgg 487
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgg 471



to top

>emb|AJ508712.1|HVU508712 Hordeum vulgare mRNA for putative thionin
          Length = 414

 Score =  797 bits (402), Expect = 0.0
 Identities = 411/414 (99%)
 Strand = Plus / Plus

                                                                       
Query: 60  atggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagtt 119
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagtt 60

                                                                       
Query: 120 ctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgc 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgc 120

                                                                       
Query: 180 tacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgt 239
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacaacgcctgccatttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgt 180

                                                                       
Query: 240 aaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaa 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaa 240

                                                                       
Query: 300 tccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtttgtgac 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 241 tccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtctgtgac 300

                                                                       
Query: 360 aacatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaac 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aacatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcagcaac 360

                                                                 
Query: 420 gcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcctaa 473
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 361 gcatgtgcccgtttctgtaatgatggtgatgtcattcagtctgttgaagcctaa 414



to top

>emb|X05589.1|HVTHIOR4 Barley mRNA for leaf-specific thionin (clone DG3)
          Length = 544

 Score =  765 bits (386), Expect = 0.0
 Identities = 395/398 (99%)
 Strand = Plus / Plus

                                                                       
Query: 90  gttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaaggcaagagt 149
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   gttatttgtgttctcatattgggtttagttctggagcaggtccaagtagaaggcaagagt 60

                                                                       
Query: 150 tgctgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgccggtggttcc 209
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 61  tgctgcaagaacacgacgggcagaaactgctacaacgcctgccgtttcgctggtggttcc 120

                                                                       
Query: 210 cgaccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaacatgtcctagg 269
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgaccagtctgcgcaactgcttgtggttgtaaaatcataagcggcccaacatgtcctagg 180

                                                                       
Query: 270 gactatcctaagctgaatcttctccctgaatccggtgaaccaaatgcgactgagtactgc 329
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gactatcctaagctgaatcttctccctgaatccggtgaaccaaatgcgactgagtactgc 240

                                                                       
Query: 330 acaattggatgcaggacttccgtttgtgacaacatggacaatgtttcccgtggccaagag 389
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 241 acaattggatgcaggacttccgtctgtgacaacatggacaatgtttcccgtggccaagag 300

                                                                       
Query: 390 atgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtgaa 449
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtgaa 360

                                                 
Query: 450 gtcattcagtctgttgaagcctaatcatgccttcttgg 487
           |||||||||||| |||||||||||||||||||||||||
Sbjct: 361 gtcattcagtctcttgaagcctaatcatgccttcttgg 398



to top

>emb|X05590.1|HVTHIOR5 Barley mRNA for leaf-specific thionin (clone DD3)
          Length = 491

 Score =  595 bits (300), Expect = e-167
 Identities = 309/312 (99%)
 Strand = Plus / Plus

                                                                       
Query: 176 ctgctacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtgg 235
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctgctacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtgg 60

                                                                       
Query: 236 ttgtaaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccc 295
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 61  ttgtaaaatcataagcggcccaacctgtcctagggactatcctaagctgaatcttctccc 120

                                                                       
Query: 296 tgaatccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtttg 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 121 tgaatccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtctg 180

                                                                       
Query: 356 tgacaacatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcag 415
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgacaacctggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcag 240

                                                                       
Query: 416 caacgcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcctaatc 475
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 caacgcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcctaatc 300

                       
Query: 476 atgccttcttgg 487
           ||||||||||||
Sbjct: 301 atgccttcttgg 312



to top

>gb|L36883.1|BLYBTH7T Hordeum vulgare thionin (BTH7) gene, complete cds
          Length = 2259

 Score =  581 bits (293), Expect = e-163
 Identities = 302/305 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    atcaatccaacgtaaccatttctcattctacttgagaaattaaggccaaccagccaacca 60
            ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1493 atcaatccaacgtaaccatatctcattctacatgagaaattaaggccaaccagccaacca 1552

                                                                        
Query: 61   tggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagttc 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1553 tggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagttc 1612

                                                                        
Query: 121  tggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgct 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1613 tggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgct 1672

                                                                        
Query: 181  acaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgta 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1673 acaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgta 1732

                                                                        
Query: 241  aaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaat 300
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1733 aaatcataagcggcccaacctgtcctagggactatcctaagctgaatcttctccctgaat 1792

                 
Query: 301  ccggt 305
            |||||
Sbjct: 1793 ccggt 1797



 Score =  222 bits (112), Expect = 8e-55
 Identities = 115/116 (99%)
 Strand = Plus / Plus

                                                                        
Query: 372  gtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 431
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 2054 gtttcccgtggccaagagatgaaatttgacatgggactctgcagcaacgcatgtgcccgt 2113

                                                                    
Query: 432  ttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgg 487
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2114 ttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttgg 2169



 Score =  131 bits (66), Expect = 2e-27
 Identities = 69/70 (98%)
 Strand = Plus / Plus

                                                                        
Query: 303  ggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtttgtgacaac 362
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1894 ggtgaaccaaatgtgactgagtactgcacaattggatgcaggacttccgtttgtgacaac 1953

                      
Query: 363  atggacaatg 372
            ||||||||||
Sbjct: 1954 atggacaatg 1963



to top

>emb|X05587.1|HVTHIOR2 Barley mRNA for leaf-specific thionin (clone DC4)
          Length = 658

 Score =  545 bits (275), Expect = e-152
 Identities = 414/459 (90%), Gaps = 1/459 (0%)
 Strand = Plus / Plus

                                                                       
Query: 37  aaattaaggccaaccagccaaccatggcaaccaacaagagtattaagagcgtggttattt 96
           ||||||| |||||  |||||||||||||| ||| ||||||||||||||| ||||| ||||
Sbjct: 3   aaattaaagccaagaagccaaccatggcacccagcaagagtattaagagtgtggtcattt 62

                                                                       
Query: 97  gtgttctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgca 156
           ||||||||||| ||||||||||||||||||||||||| || || || || ||||||||||
Sbjct: 63  gtgttctcatactgggtttagttctggagcaggtccaggtggagggaaaaagttgctgca 122

                                                                       
Query: 157 agaacacgacgggcagaaactgctacaacgcctgccgtttcgccggtggttcccgaccag 216
           || |||||   |  ||||||||||||||| | ||||||||||| ||||||||||| ||||
Sbjct: 123 aggacacgttagctagaaactgctacaacacttgccgtttcgcgggtggttcccgtccag 182

                                                                       
Query: 217 tctgcgcaactgcttgtggttgtaaaatcataagcggcccaacatgtcctagggactatc 276
           ||||||||  ||||||| |||||||||||||||| || |||| ||| ||||| |||||||
Sbjct: 183 tctgcgcaggtgcttgtcgttgtaaaatcataagtggtccaaaatgccctagtgactatc 242

                                                                       
Query: 277 ctaagctgaatcttctccctgaatccggtgaaccaaatgcgactgagtactgcacaattg 336
           |||| || ||||||||||||||||||||||||||| |||  ||| |||||||||| ||||
Sbjct: 243 ctaaacttaatcttctccctgaatccggtgaaccagatgtcactcagtactgcaccattg 302

                                                                       
Query: 337 gatgcaggacttccgtttgtgacaacatggacaatgtttcccgtggccaagagatgaaat 396
           ||||||||| ||| || |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 303 gatgcaggaattctgtctgtgacaacatggacaatgttttccgtggccaagagatgaaat 362

                                                                       
Query: 397 tcgacatgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtgaagtcattc 456
           ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 363 tcgacatgggactctgcagcaacgcatgtgcccgtttttgtaatgatggtgcagtcattc 422

                                                  
Query: 457 agtctgttgaagcctaatcatgccttcttg-gcatgatt 494
           |||||||||||||||||||||||||||||| ||||||||
Sbjct: 423 agtctgttgaagcctaatcatgccttcttgtgcatgatt 461



to top

>emb|X05576.1|HVTHIOR1 Barley mRNA for leaf-specific thionin (clone DB4)
          Length = 637

 Score =  539 bits (272), Expect = e-150
 Identities = 402/444 (90%), Gaps = 1/444 (0%)
 Strand = Plus / Plus

                                                                       
Query: 52  agccaaccatggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgg 111
           |||||||||||||| ||| ||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 11  agccaaccatggcacccagcaagagtattaagagtgtggtcatttgtgttctcatactgg 70

                                                                       
Query: 112 gtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggca 171
           |||||||||||||||||||||| || || || || |||||||||||| |||||   |  |
Sbjct: 71  gtttagttctggagcaggtccaggtggagggaaaaagttgctgcaaggacacgttagcta 130

                                                                       
Query: 172 gaaactgctacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgctt 231
           |||||||||||||| | |||| |||||| ||||||||||| ||||||||||||  |||||
Sbjct: 131 gaaactgctacaacacttgccatttcgcgggtggttcccgtccagtctgcgcaggtgctt 190

                                                                       
Query: 232 gtggttgtaaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttc 291
           || |||||||||||||||| || |||| ||| ||||| ||||||||||| ||||||||||
Sbjct: 191 gtcgttgtaaaatcataagtggtccaaaatgccctagtgactatcctaaactgaatcttc 250

                                                                       
Query: 292 tccctgaatccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccg 351
           |||||||||||||||||||| |||  ||  |||||||||| ||||||||||||| ||| |
Sbjct: 251 tccctgaatccggtgaaccagatgtcacgcagtactgcaccattggatgcaggaattctg 310

                                                                       
Query: 352 tttgtgacaacatggacaatgtttcccgtggccaagagatgaaattcgacatgggactct 411
           | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 311 tctgtgacaacatggacaatgttttccgtggccaagagatgaaattcgacatgggactct 370

                                                                       
Query: 412 gcagcaacgcatgtgcccgtttctgtaatgatggtgaagtcattcagtctgttgaagcct 471
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 371 gcagcaacgcatgtgcccgtttctgtaatgatggtgcagtcattcagtctgttgaagcct 430

                                   
Query: 472 aatcatgccttcttg-gcatgatt 494
           ||||||||||||||| ||||||||
Sbjct: 431 aatcatgccttcttgtgcatgatt 454



to top

>emb|X05588.1|HVTHIOR3 Barley mRNA for leaf-specific thionin (clone DF2)
          Length = 453

 Score =  351 bits (177), Expect = 1e-93
 Identities = 256/281 (91%), Gaps = 1/281 (0%)
 Strand = Plus / Plus

                                                                       
Query: 215 agtctgcgcaactgcttgtggttgtaaaatcataagcggcccaacatgtcctagggacta 274
           ||||||||||  ||||||| |||||||||||||||| || |||| ||| ||||| |||||
Sbjct: 1   agtctgcgcaggtgcttgtcgttgtaaaatcataagtggtccaaaatgccctagtgacta 60

                                                                       
Query: 275 tcctaagctgaatcttctccctgaatccggtgaaccaaatgcgactgagtactgcacaat 334
           |||||| || ||||||||||||||||||||||||||  |||  ||| |||||||||| ||
Sbjct: 61  tcctaaacttaatcttctccctgaatccggtgaacccgatgtcactcagtactgcaccat 120

                                                                       
Query: 335 tggatgcaggacttccgtttgtgacaacatggacaatgtttcccgtggccaagagatgaa 394
           ||||||||||| ||| || |||||||||||||||||||||| || |||||||||||||||
Sbjct: 121 tggatgcaggaattctgtctgtgacaacatggacaatgttttccatggccaagagatgaa 180

                                                                       
Query: 395 attcgacatgggactctgcagcaacgcatgtgcccgtttctgtaatgatggtgaagtcat 454
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 181 attcgacatgggactctgcagcaacgcatgtgcccgtttttgtaatgatggtgcagtcat 240

                                                    
Query: 455 tcagtctgttgaagcctaatcatgccttcttg-gcatgatt 494
           ||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 241 tcagtctgttgaatcctaatcatgccttcttgtgcatgatt 281



to top

>gb|L36882.1|BLYBTH6T Hordeum vulgare thionin (bth6) gene, complete cds
          Length = 2406

 Score =  311 bits (157), Expect = 1e-81
 Identities = 268/305 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    atcaatccaacgtaaccatttctcattctacttgagaaattaaggccaaccagccaacca 60
            ||||||||||| || |||||||||||||| || |||||||||| |||||  |||||||||
Sbjct: 1472 atcaatccaacatagccatttctcattcttctggagaaattaaagccaagaagccaacca 1531

                                                                        
Query: 61   tggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggtttagttc 120
            ||||| ||| ||||||||||||||| ||||| ||||||||||||||| ||| ||||||||
Sbjct: 1532 tggcacccagcaagagtattaagagtgtggtcatttgtgttctcatactggttttagttc 1591

                                                                        
Query: 121  tggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaactgct 180
            ||||||||||||| || || || || |||||||||||| |||||   |  ||||||||||
Sbjct: 1592 tggagcaggtccaggtggagggaaaaagttgctgcaaggacacgttagctagaaactgct 1651

                                                                        
Query: 181  acaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggttgta 240
            ||||| | ||||||||||| ||||||||||| ||||||||||||  ||||||| ||||||
Sbjct: 1652 acaacacttgccgtttcgcgggtggttcccgtccagtctgcgcaggtgcttgtcgttgta 1711

                                                                        
Query: 241  aaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccctgaat 300
            |||||||||| || |||| ||| ||||| ||||||||||| |||||||||||||||||||
Sbjct: 1712 aaatcataagtggtccaaaatgccctagtgactatcctaaactgaatcttctccctgaat 1771

                 
Query: 301  ccggt 305
            |||||
Sbjct: 1772 ccggt 1776



 Score =  214 bits (108), Expect = 2e-52
 Identities = 121/124 (97%), Gaps = 1/124 (0%)
 Strand = Plus / Plus

                                                                        
Query: 372  gtttcccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 431
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2031 gttttccgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgt 2090

                                                                        
Query: 432  ttctgtaatgatggtgaagtcattcagtctgttgaagcctaatcatgccttcttg-gcat 490
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2091 ttctgtaatgatggtgcagtcattcagtctgttgaagcctaatcatgccttcttgtgcat 2150

                
Query: 491  gatt 494
            ||||
Sbjct: 2151 gatt 2154



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 61/70 (87%)
 Strand = Plus / Plus

                                                                        
Query: 303  ggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtttgtgacaac 362
            ||||||||| |||  ||| |||||||||| |||||||||| || ||| || |||||||||
Sbjct: 1868 ggtgaaccagatgtcactcagtactgcaccattggatgcacgaattctgtctgtgacaac 1927

                      
Query: 363  atggacaatg 372
            ||||||||||
Sbjct: 1928 atggacaatg 1937



to top

>dbj|AB072342.1| Avena sativa mRNA for thionin Asthi5, complete cds
          Length = 641

 Score =  192 bits (97), Expect = 8e-46
 Identities = 312/383 (81%), Gaps = 3/383 (0%)
 Strand = Plus / Plus

                                                                       
Query: 57  accatggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggttta 116
           ||||||||||||| |||  || ||||| | |||||  ||||||| ||| || | ||||||
Sbjct: 46  accatggcaaccaccaaaggtcttaagtgtgtggtgctttgtgtcctcgtactaggttta 105

                                                                       
Query: 117 gttctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaac 176
           ||||||| ||||||||| ||||| || ||||||||||||  || |||  | |  ||||||
Sbjct: 106 gttctggggcaggtccaggtagagggaaagagttgctgcccgagcacatctgcaagaaac 165

                                                                       
Query: 177 tgctacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgcttgtggt 236
           ||||| |||| |||||||||  |||||  |||||| |||  ||||||| ||  |||||| 
Sbjct: 166 tgctataacgtctgccgtttaaccggtacttcccggccacgctgcgcatctctttgtgga 225

                                                                       
Query: 237 tgtaaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttctccct 296
           ||||||||| ||  |||   ||||||||||   | |||| |||| ||| ||||||| | |
Sbjct: 226 tgtaaaatcgtagacgg---aacatgtcctgatggctattctaaactgcatcttctactt 282

                                                                       
Query: 297 gaatccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccgtttgt 356
           ||||||||||||||  |||  |||||||||||||| || ||||||| |||||||||||||
Sbjct: 283 gaatccggtgaaccggatgtcactgagtactgcaccataggatgcatgacttccgtttgt 342

                                                                       
Query: 357 gacaacatggacaatgtttcccgtggccaagagatgaaattcgacatgggactctgcagc 416
           ||||||||||||||||||   | |||||||||||||||| ||||||||  |||||||| |
Sbjct: 343 gacaacatggacaatgttattcatggccaagagatgaaaatcgacatgctactctgcaac 402

                                  
Query: 417 aacgcatgtgcccgtttctgtaa 439
           || | |||||  |||||||||||
Sbjct: 403 aaagaatgtgttcgtttctgtaa 425



to top

>dbj|AB072341.1| Avena sativa mRNA for thionin Asthi4, complete cds
          Length = 678

 Score =  192 bits (97), Expect = 8e-46
 Identities = 259/313 (82%)
 Strand = Plus / Plus

                                                                       
Query: 52  agccaaccatggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgg 111
           ||||||||||||| || | |||| |||| ||||| |  ||||||||| | |||||  |||
Sbjct: 74  agccaaccatggccacaagcaagggtatcaagagtgctgttatttgtttcctcatgctgg 133

                                                                       
Query: 112 gtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggca 171
           |||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||  |
Sbjct: 134 gtttagttctggagcaggtccaggtagagggcaagagttgctgcaagagcacgacggcaa 193

                                                                       
Query: 172 gaaactgctacaacgcctgccgtttcgccggtggttcccgaccagtctgcgcaactgctt 231
            |||||||||||| | ||||||||| || |||| | | || ||||||||||||  | | |
Sbjct: 194 taaactgctacaatgtctgccgtttagctggtgctccgcgcccagtctgcgcaggtccat 253

                                                                       
Query: 232 gtggttgtaaaatcataagcggcccaacatgtcctagggactatcctaagctgaatcttc 291
           ||||||||||| || ||  ||   |||| ||||| || || |  ||||| | | ||||||
Sbjct: 254 gtggttgtaaactcttagacgttacaacttgtccaagtgattggcctaaacagcatcttc 313

                                                                       
Query: 292 tccctgaatccggtgaaccaaatgcgactgagtactgcacaattggatgcaggacttccg 351
           || |||||| ||||||| || ||||  ||||||||||||| |||||||||| ||||||||
Sbjct: 314 tctctgaatacggtgaagcagatgcagctgagtactgcactattggatgcatgacttccg 373

                        
Query: 352 tttgtgacaacat 364
           |||||||||||||
Sbjct: 374 tttgtgacaacat 386



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 378 cgtggccaagagatgaaattcgacatgggactctgcagcaacgcatgtgcccgtttctgt 437
           |||||||||||||||||  ||||||||  | |||||| ||||||||||| ||||||||||
Sbjct: 415 cgtggccaagagatgaacatcgacatgcaagtctgcaacaacgcatgtgtccgtttctgt 474

             
Query: 438 aa 439
           ||
Sbjct: 475 aa 476



to top

>dbj|AB072339.1| Avena sativa mRNA for leaf thionin Asthi2, complete cds
          Length = 616

 Score =  113 bits (57), Expect = 6e-22
 Identities = 114/133 (85%)
 Strand = Plus / Plus

                                                                       
Query: 54  ccaaccatggcaaccaacaagagtattaagagcgtggttatttgtgttctcatattgggt 113
           |||||||||| ||  | |||| || ||||||| ||||| |||||||||||  ||||||| 
Sbjct: 17  ccaaccatgggaagtatcaagggtcttaagagtgtggtcatttgtgttcttgtattgggg 76

                                                                       
Query: 114 ttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcaga 173
            ||||||||||||| ||||||||||| || ||||||||||||||| |||| ||||  |||
Sbjct: 77  atagttctggagcatgtccaagtagagggaaagagttgctgcaaggacaccacggcaaga 136

                        
Query: 174 aactgctacaacg 186
           |||||||||||||
Sbjct: 137 aactgctacaacg 149



to top

>emb|X96445.1|TAPURA1 T.aestivum Pur-A1 gene
          Length = 892

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                       
Query: 102 ctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaac 161
           |||||| |||| || |||||||| ||||| |||||||||||||||||||||||||||| |
Sbjct: 49  ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaagagc 108

                                   
Query: 162 acgacgggcagaaactgctacaac 185
           ||    || |||||||||||||||
Sbjct: 109 accctaggaagaaactgctacaac 132



to top

>emb|X70665.1|TAPURB1A T.aestivum mRNA for alpha1-thionin
          Length = 641

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                       
Query: 102 ctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaac 161
           |||||| |||| || |||||||| ||||| ||||||||||||||||||||||||| || |
Sbjct: 106 ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaggacc 165

                                   
Query: 162 acgacgggcagaaactgctacaac 185
           ||   ||| |||||||||||||||
Sbjct: 166 accctgggaagaaactgctacaac 189



to top

>emb|X96448.1|TAPURD1 T.aestivum Pur-D1 gene
          Length = 901

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                       
Query: 102 ctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaac 161
           |||||| |||| || |||||||| ||||| ||||||||||||||||||||||||| || |
Sbjct: 49  ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaggacc 108

                                   
Query: 162 acgacgggcagaaactgctacaac 185
           ||   ||| |||||||||||||||
Sbjct: 109 accctgggaagaaactgctacaac 132



to top

>gb|AF004018.1|AF004018 Triticum aestivum beta purothionin precursor, mRNA, complete cds
          Length = 673

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                       
Query: 102 ctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaac 161
           |||||| |||| || |||||||| ||||| |||||||||||||||||||||||||||| |
Sbjct: 57  ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaagagc 116

                                   
Query: 162 acgacgggcagaaactgctacaac 185
           ||    || |||||||||||||||
Sbjct: 117 accctaggaagaaactgctacaac 140



to top

>dbj|D84390.1|WHTA1P Wheat gene for alpha-1 purothionin, exon1-3, complete cds
          Length = 915

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                       
Query: 102 ctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaac 161
           |||||| |||| || |||||||| ||||| ||||||||||||||||||||||||| || |
Sbjct: 94  ctcatactggggttggttctggaacaggtgcaagtagaaggcaagagttgctgcaggacc 153

                                   
Query: 162 acgacgggcagaaactgctacaac 185
           ||   ||| |||||||||||||||
Sbjct: 154 accctgggaagaaactgctacaac 177



to top

>dbj|AB072338.1| Avena sativa mRNA for leaf thionin Asthi1, complete cds
          Length = 677

 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 79  ttaagagcgtggttatttgtgttctcatattgggtttagttctggagcaggtccaagtag 138
           ||||||| || || |||||||| ||  |||||||  ||||||||||||||||||||||||
Sbjct: 43  ttaagagtgtagtcatttgtgtccttgtattggggatagttctggagcaggtccaagtag 102

                               
Query: 139 aaggcaagagttgctgcaag 158
           | || |||||||||||||||
Sbjct: 103 agggaaagagttgctgcaag 122



to top

>emb|X96449.1|SCPURR1 S.cereale Pur-R1 gene
          Length = 897

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                       
Query: 102 ctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaac 161
           |||||| |||| || |||||||| ||||| ||||||||||| |||||||||||||||| |
Sbjct: 49  ctcatactggggttggttctggaacaggtgcaagtagaaggaaagagttgctgcaagagc 108

                                   
Query: 162 acgacgggcagaaactgctacaac 185
           ||    || |||||||||||||||
Sbjct: 109 accctaggaagaaactgctacaac 132



to top

>emb|Z13008.1|HVBHORD H.vulgare mRNA for beta-hordothionin
          Length = 535

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                  
Query: 102 ctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgca 156
           |||||| |||| || |||||||| || || |||||||||||||||||||||||||
Sbjct: 73  ctcatactggggttggttctggaacatgtgcaagtagaaggcaagagttgctgca 127



to top

>emb|X05901.1|HVTH1AR Barley mRNA for toxin alpha-hordothionin
          Length = 569

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 117 gttctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaac 176
           ||||| || ||||| ||||||||||||||||||||||||| || |||    || ||||||
Sbjct: 39  gttctcgaacaggtgcaagtagaaggcaagagttgctgcaggagcaccctaggaagaaac 98

                    
Query: 177 tgctacaac 185
           |||||||||
Sbjct: 99  tgctacaac 107



to top

>gb|M23080.1|BLYHORA Hordeum vulgare alpha-hordothionin (Hth-1) gene, complete cds
          Length = 1805

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 59/69 (85%)
 Strand = Plus / Plus

                                                                       
Query: 117 gttctggagcaggtccaagtagaaggcaagagttgctgcaagaacacgacgggcagaaac 176
           ||||| || ||||| ||||||||||||||||||||||||| || |||    || ||||||
Sbjct: 417 gttctcgaacaggtgcaagtagaaggcaagagttgctgcaggagcaccctaggaagaaac 476

                    
Query: 177 tgctacaac 185
           |||||||||
Sbjct: 477 tgctacaac 485



to top

>emb|X96446.1|TACSPUR1B T.aestivum Pur-B1 gene, cultivar Chinese Spring
          Length = 888

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 70/84 (83%)
 Strand = Plus / Plus

                                                                       
Query: 102 ctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaac 161
           |||||| |||| || |||||||| ||| | || |||||||||||||| ||||||| || |
Sbjct: 49  ctcatactggggttggttctggaacagctgcaggtagaaggcaagagctgctgcaggagc 108

                                   
Query: 162 acgacgggcagaaactgctacaac 185
           ||   ||| |||||||||||||||
Sbjct: 109 accctgggaagaaactgctacaac 132



to top

>emb|X70666.1|TAPURD1A T.aestivum mRNA for alpha2-purothionin
          Length = 567

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 70/84 (83%)
 Strand = Plus / Plus

                                                                       
Query: 102 ctcatattgggtttagttctggagcaggtccaagtagaaggcaagagttgctgcaagaac 161
           |||||| |||| || |||||||| ||| | || |||||||||||||| ||||||| || |
Sbjct: 8   ctcatactggggttggttctggaacagctgcaggtagaaggcaagagctgctgcaggagc 67

                                   
Query: 162 acgacgggcagaaactgctacaac 185
           ||   ||| |||||||||||||||
Sbjct: 68  accctgggaagaaactgctacaac 91



to top

>gb|AC121276.9| Mus musculus chromosome 1, clone RP24-249B16, complete sequence
          Length = 212083

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 32    ttgagaaattaaggccaacca 52
             |||||||||||||||||||||
Sbjct: 89637 ttgagaaattaaggccaacca 89657



to top

>gb|AC009229.5| Homo sapiens BAC clone RP11-314C9 from 2, complete sequence
          Length = 209156

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 346   cttccgtttgtgacaacatggacaa 370
             ||||| |||||||||||||||||||
Sbjct: 87262 cttccatttgtgacaacatggacaa 87238



to top

>ref|NG_005425.2| Homo sapiens PHF5A pseudogene 6 (LOC450250) on chromosome 15
          Length = 1523

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 145 agagttgctgcaagaacacg 164
           ||||||||||||||||||||
Sbjct: 966 agagttgctgcaagaacacg 947



to top

>gb|AC133193.3| Mus musculus BAC clone RP23-396L1 from chromosome 2, complete sequence
          Length = 180931

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    tttctcattctacttgagaa 38
             ||||||||||||||||||||
Sbjct: 40187 tttctcattctacttgagaa 40168



to top

>gb|AC015712.10| Homo sapiens chromosome 15, clone RP11-66B24, complete sequence
          Length = 173428

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   agagttgctgcaagaacacg 164
             ||||||||||||||||||||
Sbjct: 54190 agagttgctgcaagaacacg 54209



to top

>emb|AL161899.21| Human DNA sequence from clone RP11-418I10 on chromosome 13, complete
              sequence
          Length = 159981

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     gcaaccaacaagagtattaa 82
              ||||||||||||||||||||
Sbjct: 131976 gcaaccaacaagagtattaa 131995



to top

>emb|AL139801.17| Human DNA sequence from clone RP11-247M1 on chromosome 13 Contains a
             novel FLJ21562 containing gene, a novel gene, a novel
             pseudogene and a CpG island, complete sequence
          Length = 145481

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    agaaattaaggccaaccagc 54
             ||||||||||||||||||||
Sbjct: 89195 agaaattaaggccaaccagc 89214



to top

>emb|AL928931.15| Mouse DNA sequence from clone RP23-419H3 on chromosome 2, complete
            sequence
          Length = 148740

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 19   tttctcattctacttgagaa 38
            ||||||||||||||||||||
Sbjct: 4869 tttctcattctacttgagaa 4888



to top

>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001
          Length = 2005935

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 48      aaccagccaaccatggcaac 67
               ||||||||||||||||||||
Sbjct: 1035649 aaccagccaaccatggcaac 1035668



to top

>gb|AC026427.4| Homo sapiens chromosome 5 clone CTD-2193P3, complete sequence
          Length = 175838

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     ttgtgttctcatattgggtt 114
              ||||||||||||||||||||
Sbjct: 112957 ttgtgttctcatattgggtt 112938



to top

>gb|AC097482.2| Homo sapiens BAC clone RP11-131L11 from 4, complete sequence
          Length = 160763

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    tcattctacttgagaaatta 42
             ||||||||||||||||||||
Sbjct: 11325 tcattctacttgagaaatta 11306



to top

>gb|AC008518.3|AC008518 Homo sapiens chromosome 5 clone CTC-459I6, complete sequence
          Length = 172551

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 95    ttgtgttctcatattgggtt 114
             ||||||||||||||||||||
Sbjct: 31663 ttgtgttctcatattgggtt 31644



to top

>dbj|BS000023.1| Pan troglodytes chromosome 22 clone:PTB-018G23, map 22, complete
             sequences
          Length = 135513

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 351   gtttgtgacaacatggacaa 370
             ||||||||||||||||||||
Sbjct: 53200 gtttgtgacaacatggacaa 53181



to top

>emb|AL669974.6| Mouse DNA sequence from clone RP23-229E11 on chromosome X, complete
             sequence
          Length = 188048

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 16    ccatttctcattctacttga 35
             ||||||||||||||||||||
Sbjct: 95564 ccatttctcattctacttga 95545


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,753,791
Number of Sequences: 3902068
Number of extensions: 3753791
Number of successful extensions: 65602
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65521
Number of HSP's gapped (non-prelim): 73
length of query: 494
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 472
effective length of database: 17,147,199,772
effective search space: 8093478292384
effective search space used: 8093478292384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top