| Clone Name | baet100f09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 167 bits (84), Expect = 4e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 179 aaggggaggaccacttcgacagcgtgccggactcgctcgtgctcctcatcttcaacaagc 238 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| | Sbjct: 11586496 aaggggaggaccacttcgaccgcgtcccggactcgctcgtgctcctcatcttcaaccgcc 11586555 Query: 239 tcgcggacgcgcgctcgctcggccgctgctccgcggtctcgcgccgcttcaacgcgctcg 298 |||| |||||||||||||| || || ||||| || || || || |||||| |||||| Sbjct: 11586556 tcgccgacgcgcgctcgctggggcggtgctcggccgtgtccaagcggttcaactcgctcg 11586615 Query: 299 tcccgctcgtcgacgacgcctgcctccgcatcgaccgcgtcatc 342 | |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 11586616 tgccgctcgtggacgacgcctgcctccgcatcgaccgcgtcatc 11586659 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 132 aatgcagtcgaggcaccgggtgttcgccgaggacctgctcct 173 |||||||||||||||| |||||||||| |||||||||||||| Sbjct: 11586440 aatgcagtcgaggcacagggtgttcgcggaggacctgctcct 11586481 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 393 cctcctcaagaccgtgctcctggccgtgctcaagcccttcggccactgcgacgccgg 449 |||||||||| | |||| || |||||||||||||| ||||| |||||||||||||| Sbjct: 11586734 cctcctcaaggcgatgctgctcgccgtgctcaagccgttcgggcactgcgacgccgg 11586790 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccctcttcctct 31 |||||||||||||| || ||||||||||| Sbjct: 849112 caccaccaccaccaccatcctcttcctct 849140 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 cggcgtcatctccggcctcctcaa 401 ||||||||||||||||||| |||| Sbjct: 33056462 cggcgtcatctccggcctcatcaa 33056485 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 ccgcgtcatcgccgccgacgacgc 356 ||||||| |||||||||||||||| Sbjct: 15154619 ccgcgtcgtcgccgccgacgacgc 15154596
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 167 bits (84), Expect = 4e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 179 aaggggaggaccacttcgacagcgtgccggactcgctcgtgctcctcatcttcaacaagc 238 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| | Sbjct: 137068 aaggggaggaccacttcgaccgcgtcccggactcgctcgtgctcctcatcttcaaccgcc 137127 Query: 239 tcgcggacgcgcgctcgctcggccgctgctccgcggtctcgcgccgcttcaacgcgctcg 298 |||| |||||||||||||| || || ||||| || || || || |||||| |||||| Sbjct: 137128 tcgccgacgcgcgctcgctggggcggtgctcggccgtgtccaagcggttcaactcgctcg 137187 Query: 299 tcccgctcgtcgacgacgcctgcctccgcatcgaccgcgtcatc 342 | |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 137188 tgccgctcgtggacgacgcctgcctccgcatcgaccgcgtcatc 137231 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 132 aatgcagtcgaggcaccgggtgttcgccgaggacctgctcct 173 |||||||||||||||| |||||||||| |||||||||||||| Sbjct: 137012 aatgcagtcgaggcacagggtgttcgcggaggacctgctcct 137053 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 393 cctcctcaagaccgtgctcctggccgtgctcaagcccttcggccactgcgacgccgg 449 |||||||||| | |||| || |||||||||||||| ||||| |||||||||||||| Sbjct: 137306 cctcctcaaggcgatgctgctcgccgtgctcaagccgttcgggcactgcgacgccgg 137362
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 167 bits (84), Expect = 4e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 179 aaggggaggaccacttcgacagcgtgccggactcgctcgtgctcctcatcttcaacaagc 238 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| | Sbjct: 11583259 aaggggaggaccacttcgaccgcgtcccggactcgctcgtgctcctcatcttcaaccgcc 11583318 Query: 239 tcgcggacgcgcgctcgctcggccgctgctccgcggtctcgcgccgcttcaacgcgctcg 298 |||| |||||||||||||| || || ||||| || || || || |||||| |||||| Sbjct: 11583319 tcgccgacgcgcgctcgctggggcggtgctcggccgtgtccaagcggttcaactcgctcg 11583378 Query: 299 tcccgctcgtcgacgacgcctgcctccgcatcgaccgcgtcatc 342 | |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 11583379 tgccgctcgtggacgacgcctgcctccgcatcgaccgcgtcatc 11583422 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 132 aatgcagtcgaggcaccgggtgttcgccgaggacctgctcct 173 |||||||||||||||| |||||||||| |||||||||||||| Sbjct: 11583203 aatgcagtcgaggcacagggtgttcgcggaggacctgctcct 11583244 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 393 cctcctcaagaccgtgctcctggccgtgctcaagcccttcggccactgcgacgccgg 449 |||||||||| | |||| || |||||||||||||| ||||| |||||||||||||| Sbjct: 11583497 cctcctcaaggcgatgctgctcgccgtgctcaagccgttcgggcactgcgacgccgg 11583553 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccctcttcctct 31 |||||||||||||| || ||||||||||| Sbjct: 849110 caccaccaccaccaccatcctcttcctct 849138 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 cggcgtcatctccggcctcctcaa 401 ||||||||||||||||||| |||| Sbjct: 33146972 cggcgtcatctccggcctcatcaa 33146995 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 ccgcgtcatcgccgccgacgacgc 356 ||||||| |||||||||||||||| Sbjct: 15149153 ccgcgtcgtcgccgccgacgacgc 15149130
>dbj|AK071172.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081A12, full insert sequence Length = 1508 Score = 167 bits (84), Expect = 4e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 179 aaggggaggaccacttcgacagcgtgccggactcgctcgtgctcctcatcttcaacaagc 238 |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| | Sbjct: 142 aaggggaggaccacttcgaccgcgtcccggactcgctcgtgctcctcatcttcaaccgcc 201 Query: 239 tcgcggacgcgcgctcgctcggccgctgctccgcggtctcgcgccgcttcaacgcgctcg 298 |||| |||||||||||||| || || ||||| || || || || |||||| |||||| Sbjct: 202 tcgccgacgcgcgctcgctggggcggtgctcggccgtgtccaagcggttcaactcgctcg 261 Query: 299 tcccgctcgtcgacgacgcctgcctccgcatcgaccgcgtcatc 342 | |||||||| ||||||||||||||||||||||||||||||||| Sbjct: 262 tgccgctcgtggacgacgcctgcctccgcatcgaccgcgtcatc 305 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 132 aatgcagtcgaggcaccgggtgttcgccgaggacctgctcct 173 |||||||||||||||| |||||||||| |||||||||||||| Sbjct: 86 aatgcagtcgaggcacagggtgttcgcggaggacctgctcct 127 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 393 cctcctcaagaccgtgctcctggccgtgctcaagcccttcggccactgcgacgccgg 449 |||||||||| | |||| || |||||||||||||| ||||| |||||||||||||| Sbjct: 380 cctcctcaaggcgatgctgctcgccgtgctcaagccgttcgggcactgcgacgccgg 436
>ref|XM_475686.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1239 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 254 cgctcggccgctgctccgcggtctcgcgccgcttcaacgcgctcgtcccgctcgtcgac 312 ||||||||||||||||| ||||| ||||||||| ||| |||||||| ||||||||| Sbjct: 164 cgctcggccgctgctccctcgtctcccgccgcttccacgacctcgtccccctcgtcgac 222 Score = 40.1 bits (20), Expect = 6.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 187 gaccacttcgacagcgtgccggactcgctcgtgctcctcatcttcaac 234 |||||||||||| || | || ||| ||||| ||||| ||||||||||| Sbjct: 97 gaccacttcgaccgcctccccgacccgctcctgctcgtcatcttcaac 144
>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11, complete sequence Length = 162772 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 254 cgctcggccgctgctccgcggtctcgcgccgcttcaacgcgctcgtcccgctcgtcgac 312 ||||||||||||||||| ||||| ||||||||| ||| |||||||| ||||||||| Sbjct: 25693 cgctcggccgctgctccctcgtctcccgccgcttccacgacctcgtccccctcgtcgac 25751 Score = 40.1 bits (20), Expect = 6.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 187 gaccacttcgacagcgtgccggactcgctcgtgctcctcatcttcaac 234 |||||||||||| || | || ||| ||||| ||||| ||||||||||| Sbjct: 25626 gaccacttcgaccgcctccccgacccgctcctgctcgtcatcttcaac 25673
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 254 cgctcggccgctgctccgcggtctcgcgccgcttcaacgcgctcgtcccgctcgtcgac 312 ||||||||||||||||| ||||| ||||||||| ||| |||||||| ||||||||| Sbjct: 25083038 cgctcggccgctgctccctcgtctcccgccgcttccacgacctcgtccccctcgtcgac 25083096 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 203 tgccggactcgctcgtgctcctcatcttcaacaagctcgcggacgcgcgctcgctcggcc 262 ||||||||||||| ||||| | ||| ||||||| ||| ||| | |||||||||||||| Sbjct: 23945805 tgccggactcgcttgtgctggtgatcctcaacaatgtcgaggatgtgcgctcgctcggcc 23945746 Query: 263 gctgctccgc 272 | |||||||| Sbjct: 23945745 ggtgctccgc 23945736 Score = 40.1 bits (20), Expect = 6.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 187 gaccacttcgacagcgtgccggactcgctcgtgctcctcatcttcaac 234 |||||||||||| || | || ||| ||||| ||||| ||||||||||| Sbjct: 25082971 gaccacttcgaccgcctccccgacccgctcctgctcgtcatcttcaac 25083018 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaggcgagctgctgctgccg 85 |||||||||||||||||||| Sbjct: 1336015 gaggcgagctgctgctgccg 1335996 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaggcgagctgctgctgccg 85 |||||||||||||||||||| Sbjct: 1309630 gaggcgagctgctgctgccg 1309649
>dbj|AK072274.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008A21, full insert sequence Length = 3534 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 254 cgctcggccgctgctccgcggtctcgcgccgcttcaacgcgctcgtcccgctcgtcgac 312 ||||||||||||||||| ||||| ||||||||| ||| |||||||| ||||||||| Sbjct: 244 cgctcggccgctgctccctcgtctcccgccgcttccacgacctcgtccccctcgtcgac 302 Score = 40.1 bits (20), Expect = 6.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 187 gaccacttcgacagcgtgccggactcgctcgtgctcctcatcttcaac 234 |||||||||||| || | || ||| ||||| ||||| ||||||||||| Sbjct: 177 gaccacttcgaccgcctccccgacccgctcctgctcgtcatcttcaac 224
>dbj|AK068685.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013161L06, full insert sequence Length = 1878 Score = 54.0 bits (27), Expect = 4e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 254 cgctcggccgctgctccgcggtctcgcgccgcttcaacgcgctcgtcccgctcgtcgac 312 ||||||||||||||||| ||||| ||||||||| ||| |||||||| ||||||||| Sbjct: 244 cgctcggccgctgctccctcgtctcccgccgcttccacgacctcgtccccctcgtcgac 302 Score = 40.1 bits (20), Expect = 6.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 187 gaccacttcgacagcgtgccggactcgctcgtgctcctcatcttcaac 234 |||||||||||| || | || ||| ||||| ||||| ||||||||||| Sbjct: 177 gaccacttcgaccgcctccccgacccgctcctgctcgtcatcttcaac 224
>ref|XM_475458.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1056 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 203 tgccggactcgctcgtgctcctcatcttcaacaagctcgcggacgcgcgctcgctcggcc 262 ||||||||||||| ||||| | ||| ||||||| ||| ||| | |||||||||||||| Sbjct: 53 tgccggactcgcttgtgctggtgatcctcaacaatgtcgaggatgtgcgctcgctcggcc 112 Query: 263 gctgctccgc 272 | |||||||| Sbjct: 113 ggtgctccgc 122
>gb|BT018796.1| Zea mays clone EL01N0528A06.d mRNA sequence Length = 1774 Score = 52.0 bits (26), Expect = 0.002 Identities = 68/82 (82%) Strand = Plus / Plus Query: 187 gaccacttcgacagcgtgccggactcgctcgtgctcctcatcttcaacaagctcgcggac 246 |||||||| ||| || ||||||| |||||||| || || ||| | |||||| ||| |||| Sbjct: 550 gaccactttgactgcctgccggattcgctcgtcctgctgatcctgaacaaggtcgaggac 609 Query: 247 gcgcgctcgctcggccgctgct 268 | ||| ||||||||||| |||| Sbjct: 610 gtgcgatcgctcggccggtgct 631
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 203 tgccggactcgctcgtgctcctcatcttcaacaagctcgcggacgcgcgctcgctcggcc 262 ||||||||||||| ||||| | ||| ||||||| ||| ||| | |||||||||||||| Sbjct: 14294 tgccggactcgcttgtgctggtgatcctcaacaatgtcgaggatgtgcgctcgctcggcc 14235 Query: 263 gctgctccgc 272 | |||||||| Sbjct: 14234 ggtgctccgc 14225
>dbj|AK071818.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114L14, full insert sequence Length = 1794 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 203 tgccggactcgctcgtgctcctcatcttcaacaagctcgcggacgcgcgctcgctcggcc 262 ||||||||||||| ||||| | ||| ||||||| ||| ||| | |||||||||||||| Sbjct: 543 tgccggactcgcttgtgctggtgatcctcaacaatgtcgaggatgtgcgctcgctcggcc 602 Query: 263 gctgctccgc 272 | |||||||| Sbjct: 603 ggtgctccgc 612
>dbj|AB090819.1| Anopheles gambiae retrotransposon R6Ag3 DNA, complete sequence Length = 5289 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 212 cgctcgtgctcctcatcttcaaca 235 |||||||||||||||||||||||| Sbjct: 556 cgctcgtgctcctcatcttcaaca 533
>ref|NM_191413.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1191 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 274 gtctcgcgccgcttcaacgcgctcgtcccgctcgtcgac 312 |||||||| || ||| ||||||||||||| ||||||||| Sbjct: 127 gtctcgcggcggttccacgcgctcgtccccctcgtcgac 165
>gb|AC158993.2| Mus musculus BAC clone RP24-427N13 from chromosome 7, complete sequence Length = 179746 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacaccctcttc 27 |||||||||||||||| |||||||||| Sbjct: 12993 atcaccaccaccaccatcaccctcttc 13019 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 48753 atcaccaccaccaccaacacc 48733
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 454 aggcccgccggccacgcgcccgc 476 ||||||||||||||||||||||| Sbjct: 2373260 aggcccgccggccacgcgcccgc 2373238 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 336 cgtcatcgccgccgacgacgcgcccgcc 363 ||||| |||||||| ||||||||||||| Sbjct: 1670721 cgtcaccgccgccgccgacgcgcccgcc 1670694 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 ccgacgacgcgcccgccggc 366 |||||||||||||||||||| Sbjct: 1196912 ccgacgacgcgcccgccggc 1196931
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 327 catcgaccgcgtcatcgccgccgacga 353 ||||||||||| ||||||||||||||| Sbjct: 2694759 catcgaccgcggcatcgccgccgacga 2694785
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 454 aggcccgccggccacgcgcccgc 476 ||||||||||||||||||||||| Sbjct: 2011305 aggcccgccggccacgcgcccgc 2011327 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 ccgacgacgcgcccgccggc 366 |||||||||||||||||||| Sbjct: 1078396 ccgacgacgcgcccgccggc 1078415
>gb|AC079200.6| Homo sapiens chromosome 8, clone RP11-1058B24, complete sequence Length = 117978 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 39 acctcagctgctcctcctcctcc 61 ||||||||||||||||||||||| Sbjct: 64316 acctcagctgctcctcctcctcc 64338
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 342 cgccgccgacgacgcgcccgccggcccgcgc 372 ||||||||||||||| |||||| |||||||| Sbjct: 861892 cgccgccgacgacgcccccgcccgcccgcgc 861862
>gb|AY958432.1| Homo sapiens methionine sulfoxide reductase gene, complete cds, alternatively spliced Length = 379048 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 39 acctcagctgctcctcctcctcc 61 ||||||||||||||||||||||| Sbjct: 169702 acctcagctgctcctcctcctcc 169680
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 274 gtctcgcgccgcttcaacgcgctcgtcccgctcgtcgac 312 |||||||| || ||| ||||||||||||| ||||||||| Sbjct: 32504888 gtctcgcggcggttccacgcgctcgtccccctcgtcgac 32504850
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 410 tcctggccgtgctcaagcccttcggcc 436 ||||||||||||||||| ||||||||| Sbjct: 2749334 tcctggccgtgctcaagaccttcggcc 2749360
>gb|AC149055.6| Mus musculus BAC clone RP23-358K1 from chromosome 7, complete sequence Length = 215193 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacaccctcttc 27 |||||||||||||||| |||||||||| Sbjct: 17118 atcaccaccaccaccatcaccctcttc 17092
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 360 cgccggcccgcgccagcgcggcg 382 ||||||||||||||||||||||| Sbjct: 3260481 cgccggcccgcgccagcgcggcg 3260459 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 cgccggcccgcgccagcgcg 379 |||||||||||||||||||| Sbjct: 3828944 cgccggcccgcgccagcgcg 3828925 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 ccgccggcccgcgccagcgc 378 |||||||||||||||||||| Sbjct: 3294991 ccgccggcccgcgccagcgc 3294972
>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665A11 Length = 166421 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Minus Query: 274 gtctcgcgccgcttcaacgcgctcgtcccgctcgtcgac 312 |||||||| || ||| ||||||||||||| ||||||||| Sbjct: 92409 gtctcgcggcggttccacgcgctcgtccccctcgtcgac 92371
>dbj|AK061585.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-E07, full insert sequence Length = 1826 Score = 46.1 bits (23), Expect = 0.11 Identities = 35/39 (89%) Strand = Plus / Plus Query: 274 gtctcgcgccgcttcaacgcgctcgtcccgctcgtcgac 312 |||||||| || ||| ||||||||||||| ||||||||| Sbjct: 272 gtctcgcggcggttccacgcgctcgtccccctcgtcgac 310
>ref|XM_991887.1| PREDICTED: Mus musculus MAM domain containing glycosylphosphatidylinositol anchor 1 (Mdga1), mRNA Length = 7555 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacaccctcttcctc 30 |||||||||||||||| |||| |||||||| Sbjct: 4805 atcaccaccaccaccatcaccatcttcctc 4834
>ref|XM_900379.2| PREDICTED: Mus musculus MAM domain containing glycosylphosphatidylinositol anchor 1, transcript variant 3 (Mdga1), mRNA Length = 5575 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacaccctcttcctc 30 |||||||||||||||| |||| |||||||| Sbjct: 2825 atcaccaccaccaccatcaccatcttcctc 2854
>ref|XM_900398.2| PREDICTED: Mus musculus MAM domain containing glycosylphosphatidylinositol anchor 1, transcript variant 5 (Mdga1), mRNA Length = 7197 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacaccctcttcctc 30 |||||||||||||||| |||| |||||||| Sbjct: 4447 atcaccaccaccaccatcaccatcttcctc 4476
>ref|XM_193868.7| PREDICTED: Mus musculus MAM domain containing glycosylphosphatidylinositol anchor 1, transcript variant 1 (Mdga1), mRNA Length = 7566 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacaccctcttcctc 30 |||||||||||||||| |||| |||||||| Sbjct: 4816 atcaccaccaccaccatcaccatcttcctc 4845
>ref|XM_746696.1| Aspergillus fumigatus Af293 3-demethylubiquinone-9 3-methyltransferase (Afu4g10370) partial mRNA Length = 1038 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccctc 24 |||||||||||||||||||||| Sbjct: 258 caccaccaccaccaacaccctc 279
>emb|AL591789.1|SME591789 Sinorhizobium meliloti 1021 complete chromosome; segment 8/12 Length = 294800 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 41 ctcagctgctcctcctcctccgcgcg 66 |||||| ||||||||||||||||||| Sbjct: 207249 ctcagccgctcctcctcctccgcgcg 207274
>gb|AC154291.2| Mus musculus BAC clone RP23-447B21 from chromosome 17, complete sequence Length = 178703 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacaccctcttcctc 30 |||||||||||||||| |||| |||||||| Sbjct: 144101 atcaccaccaccaccatcaccatcttcctc 144072
>gb|BC056477.1| Mus musculus cDNA clone IMAGE:5686215, partial cds Length = 3117 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacaccctcttcctc 30 |||||||||||||||| |||| |||||||| Sbjct: 340 atcaccaccaccaccatcaccatcttcctc 369
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 gccggcccgcgccagcgcggcg 382 |||||||||||||||||||||| Sbjct: 156515 gccggcccgcgccagcgcggcg 156536
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 361 gccggcccgcgccagcgcggcg 382 |||||||||||||||||||||| Sbjct: 81603 gccggcccgcgccagcgcggcg 81582
>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12 Length = 349346 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 361 gccggcccgcgccagcgcggcg 382 |||||||||||||||||||||| Sbjct: 32121 gccggcccgcgccagcgcggcg 32142
>ref|NM_003403.3| Homo sapiens YY1 transcription factor (YY1), mRNA Length = 2592 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 248 cgcgctcgctcggccgctgctc 269 |||||||||||||||||||||| Sbjct: 271 cgcgctcgctcggccgctgctc 250
>gb|AC151294.3| Mus musculus BAC clone RP23-137I7 from chromosome 17, complete sequence Length = 206868 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacaccctcttcctc 30 |||||||||||||||| |||| |||||||| Sbjct: 25430 atcaccaccaccaccatcaccatcttcctc 25401
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Plus Query: 328 atcgaccgcgtcatcgccgccgacga 353 |||||||||| ||||||||||||||| Sbjct: 5802235 atcgaccgcggcatcgccgccgacga 5802260 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 291 cgcgctcgtcccgctcgtcgacgacgcc 318 |||||||| || |||||||||||||||| Sbjct: 2639280 cgcgctcggcctgctcgtcgacgacgcc 2639307
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Minus Query: 4 accaccaccaccaacaccctcttcctctac 33 ||||||||||||| |||||||| ||||||| Sbjct: 1115684 accaccaccaccaccaccctctacctctac 1115655
>emb|AL157871.5|CNS01RG9 Human chromosome 14 DNA sequence BAC R-638I2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 180688 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 248 cgcgctcgctcggccgctgctc 269 |||||||||||||||||||||| Sbjct: 47007 cgcgctcgctcggccgctgctc 46986
>gb|AF047455.1|AF047455 Homo sapiens YY1 gene, promoter region Length = 2193 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 248 cgcgctcgctcggccgctgctc 269 |||||||||||||||||||||| Sbjct: 1987 cgcgctcgctcggccgctgctc 1966
>gb|M77698.1|HUMKRP Homo sapiens GLI-Krupple related protein (YY1) mRNA, complete cds Length = 2353 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 248 cgcgctcgctcggccgctgctc 269 |||||||||||||||||||||| Sbjct: 31 cgcgctcgctcggccgctgctc 10
>gb|AC134236.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0056G13, complete sequence Length = 148011 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccctcttcctct 31 |||||||||||||| || ||||||||||| Sbjct: 5647 caccaccaccaccaccatcctcttcctct 5675
>ref|XM_629406.1| Dictyostelium discoideum hypothetical protein (DDB0219802), partial mRNA Length = 3504 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 1101 atcaccaccaccaccaacacc 1121
>ref|XM_483458.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1629 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 accgcgtcatcgccgccgacg 352 ||||||||||||||||||||| Sbjct: 338 accgcgtcatcgccgccgacg 358
>ref|XM_480199.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1291 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 441 cgacgccggcgccaggcccgccggc 465 |||||||||||||||||| |||||| Sbjct: 984 cgacgccggcgccaggccagccggc 960
>ref|XM_474052.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 456 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 ctcagctgctcctcctcctcc 61 ||||||||||||||||||||| Sbjct: 381 ctcagctgctcctcctcctcc 361
>ref|XM_471234.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1419 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 cgtcatcgccgccgacgacgc 356 ||||||||||||||||||||| Sbjct: 261 cgtcatcgccgccgacgacgc 241
>gb|AC125735.1| Leishmania major strain Friedlin chromosome 3, complete sequence Length = 384518 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccctcttcctct 31 |||||||||||||| |||||||| ||||| Sbjct: 203528 caccaccaccaccaccaccctctccctct 203556
>gb|BC076725.1| Xenopus laevis mannosidase, alpha, class 1A, member 2, mRNA (cDNA clone MGC:81228 IMAGE:6318975), complete cds Length = 3657 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 41 ctcagctgctcctcctcctcc 61 ||||||||||||||||||||| Sbjct: 826 ctcagctgctcctcctcctcc 806
>ref|XM_951134.1| Neurospora crassa OR74A hypothetical protein (NCU08784.1) partial mRNA Length = 1056 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 40 atcaccaccaccaccaacacc 60
>ref|XM_330900.1| Neurospora crassa OR74A hypothetical protein (NCU08784.1) partial mRNA Length = 1056 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 40 atcaccaccaccaccaacacc 60
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 462 cggccacgcgcccgccagcacgcgc 486 ||||||| ||||||||||||||||| Sbjct: 2015483 cggccactcgcccgccagcacgcgc 2015459
>gb|AC132235.3| Mus musculus BAC clone RP24-497H15 from chromosome 17, complete sequence Length = 180462 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 90905 atcaccaccaccaccaacacc 90925
>gb|BC059902.1| Mus musculus protein tyrosine phosphatase, non-receptor type 23, mRNA (cDNA clone IMAGE:6822680), partial cds Length = 4113 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccct 23 ||||||||||||||||||||| Sbjct: 1965 caccaccaccaccaacaccct 1985
>ref|XM_923609.2| PREDICTED: Mus musculus protein tyrosine phosphatase, non-receptor type 23, transcript variant 2 (Ptpn23), mRNA Length = 3062 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccct 23 ||||||||||||||||||||| Sbjct: 874 caccaccaccaccaacaccct 894
>ref|XM_923623.2| PREDICTED: Mus musculus protein tyrosine phosphatase, non-receptor type 23, transcript variant 5 (Ptpn23), mRNA Length = 5190 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccct 23 ||||||||||||||||||||| Sbjct: 3083 caccaccaccaccaacaccct 3103
>ref|XM_135197.8| PREDICTED: Mus musculus protein tyrosine phosphatase, non-receptor type 23, transcript variant 1 (Ptpn23), mRNA Length = 5346 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccct 23 ||||||||||||||||||||| Sbjct: 3239 caccaccaccaccaacaccct 3259
>ref|XM_001005288.1| PREDICTED: Mus musculus protein tyrosine phosphatase, non-receptor type 23, transcript variant 4 (Ptpn23), mRNA Length = 3062 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccct 23 ||||||||||||||||||||| Sbjct: 874 caccaccaccaccaacaccct 894
>ref|XM_001005285.1| PREDICTED: Mus musculus protein tyrosine phosphatase, non-receptor type 23, transcript variant 2 (Ptpn23), mRNA Length = 5190 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccct 23 ||||||||||||||||||||| Sbjct: 3083 caccaccaccaccaacaccct 3103
>ref|XM_001005289.1| PREDICTED: Mus musculus protein tyrosine phosphatase, non-receptor type 23, transcript variant 5 (Ptpn23), mRNA Length = 5346 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccct 23 ||||||||||||||||||||| Sbjct: 3239 caccaccaccaccaacaccct 3259
>gb|AC115900.11| Mus musculus chromosome 6, clone RP24-464A7, complete sequence Length = 175003 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 120906 atcaccaccaccaccaacacc 120926
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 ccgccggcccgcgccagcgcg 379 ||||||||||||||||||||| Sbjct: 3756609 ccgccggcccgcgccagcgcg 3756589
>gb|AC091519.16| Mus musculus strain 129/SvJ chromosome 2 clone mgs1-452h5, complete sequence Length = 229220 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 tcaccaccaccaccaacaccctctt 26 |||||||||||||||| |||||||| Sbjct: 85770 tcaccaccaccaccaaaaccctctt 85794
>gb|AC125359.4| Mus musculus BAC clone RP23-102I17 from chromosome 14, complete sequence Length = 192163 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 115478 atcaccaccaccaccaacacc 115458
>gb|AC124202.3| Mus musculus BAC clone RP23-337F21 from chromosome 14, complete sequence Length = 189556 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 19 accctcttcctctacccgcaa 39 ||||||||||||||||||||| Sbjct: 71470 accctcttcctctacccgcaa 71490
>emb|AL161636.21| Human DNA sequence from clone RP1-140J1 on chromosome 1 Contains a novel gene, two novel small proline rich proteins, a ribosomal protein, large, P0 (RPLP0) pseudogene, the LOR gene for loricri and the 3' end of the PGLYRPIalpha gene for peptidoglycan recognition protein-I-alpha, complete sequence Length = 137712 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 75537 atcaccaccaccaccaacacc 75517 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 75443 atcaccaccaccaccaacacc 75423 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 75349 atcaccaccaccaccaacacc 75329 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 75255 atcaccaccaccaccaacacc 75235 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 75161 atcaccaccaccaccaacacc 75141 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 75067 atcaccaccaccaccaacacc 75047 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 74973 atcaccaccaccaccaacacc 74953 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 74879 atcaccaccaccaccaacacc 74859 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 74785 atcaccaccaccaccaacacc 74765
>emb|AL022312.7|HS1104E15 Human DNA sequence from clone RP5-1104E15 on chromosome 22q12.3-13.1 Contains the MGAT3 gene for mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, the gene for a predicted protein, the ATF4 gene for activating transcription factor 4 (tax-responsive enhancer element B67) and the 5' end of the CACNA1I gene for voltage-dependent calcium channel, alpha 1I subunit. Contains ESTs, STSs, GSSs and five putative CpG islands, complete sequence Length = 112460 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 106401 atcaccaccaccaccaacacc 106381 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 106341 atcaccaccaccaccaacacc 106321
>emb|BX019640.1|CNS08NBG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA29DH10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 309 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 14 atcaccaccaccaccaacacc 34
>emb|BX020398.1|CNS08NWI Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA30AB08 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 390 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 6 atcaccaccaccaccaacacc 26
>emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0095E20, complete sequence Length = 138572 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 cgtcatcgccgccgacgacgc 356 ||||||||||||||||||||| Sbjct: 85021 cgtcatcgccgccgacgacgc 85001
>emb|AL606657.4|OSJN00101 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034I13, complete sequence Length = 123480 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 ctcagctgctcctcctcctcc 61 ||||||||||||||||||||| Sbjct: 89367 ctcagctgctcctcctcctcc 89387 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 ctcagctgctcctcctcctcc 61 ||||||||||||||||||||| Sbjct: 82569 ctcagctgctcctcctcctcc 82589
>emb|AJ441131.1|AGA441131 Anopheles gambiae BAC clone 8N20 Length = 129790 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 122023 atcaccaccaccaccaacacc 122003
>emb|AL845258.5| Mouse DNA sequence from clone RP23-315H12 on chromosome 2, complete sequence Length = 164324 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 tcaccaccaccaccaacaccctctt 26 |||||||||||||||| |||||||| Sbjct: 54111 tcaccaccaccaccaaaaccctctt 54087
>emb|X55687.1|LEEXTEN7 Tomato extensin mRNA (clones u1 and u2) Length = 231 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 12 atcaccaccaccaccaacacc 32
>ref|XM_680119.1| PREDICTED: Danio rerio similar to LIM domain only protein 7 (LOC557117), mRNA Length = 1070 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 87 atcaccaccaccaccaacacc 107
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 359 ccgccggcccgcgccagcgcggcgtcatc 387 |||| ||||||||| |||||||||||||| Sbjct: 26999 ccgcgggcccgcgcgagcgcggcgtcatc 27027
>emb|BX248304.8| Zebrafish DNA sequence from clone CH211-196K22 in linkage group 14, complete sequence Length = 218178 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 26022 atcaccaccaccaccaacacc 26042
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 ctcagctgctcctcctcctcc 61 ||||||||||||||||||||| Sbjct: 32472566 ctcagctgctcctcctcctcc 32472586 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 41 ctcagctgctcctcctcctcc 61 ||||||||||||||||||||| Sbjct: 32465768 ctcagctgctcctcctcctcc 32465788 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 336 cgtcatcgccgccgacgacgc 356 ||||||||||||||||||||| Sbjct: 2469119 cgtcatcgccgccgacgacgc 2469099
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 332 accgcgtcatcgccgccgacg 352 ||||||||||||||||||||| Sbjct: 26328151 accgcgtcatcgccgccgacg 26328131 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 441 cgacgccggcgccaggcccgccggc 465 |||||||||||||||||| |||||| Sbjct: 3487380 cgacgccggcgccaggccagccggc 3487404
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccctcttcctct 31 |||||||||||||| || ||||||||||| Sbjct: 144657 caccaccaccaccaccatcctcttcctct 144685
>dbj|AK173178.1| Mus musculus premature mRNA for mKIAA1471 protein Length = 3475 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccct 23 ||||||||||||||||||||| Sbjct: 1282 caccaccaccaccaacaccct 1302
>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1770_H02 Length = 170648 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 332 accgcgtcatcgccgccgacg 352 ||||||||||||||||||||| Sbjct: 57732 accgcgtcatcgccgccgacg 57712
>dbj|AP004698.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0498E12 Length = 153523 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 441 cgacgccggcgccaggcccgccggc 465 |||||||||||||||||| |||||| Sbjct: 120799 cgacgccggcgccaggccagccggc 120823
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0672D01 Length = 146954 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 441 cgacgccggcgccaggcccgccggc 465 |||||||||||||||||| |||||| Sbjct: 43097 cgacgccggcgccaggccagccggc 43121
>dbj|AK109080.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-H03, full insert sequence Length = 1291 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 441 cgacgccggcgccaggcccgccggc 465 |||||||||||||||||| |||||| Sbjct: 984 cgacgccggcgccaggccagccggc 960
>dbj|AK100297.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077B14, full insert sequence Length = 1629 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 332 accgcgtcatcgccgccgacg 352 ||||||||||||||||||||| Sbjct: 338 accgcgtcatcgccgccgacg 358
>dbj|AP001751.1| Homo sapiens genomic DNA, chromosome 21q, section 95/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 69790 atcaccaccaccaccaacacc 69810
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 360 cgccggcccgcgccagcgcggcgtc 384 ||||||| ||||||||||||||||| Sbjct: 3977452 cgccggcgcgcgccagcgcggcgtc 3977476 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 358 cccgccggcccgcgccagcgcggcg 382 |||||||||||||||| |||||||| Sbjct: 2361644 cccgccggcccgcgccggcgcggcg 2361620
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 359 ccgccggcccgcgccagcgcg 379 ||||||||||||||||||||| Sbjct: 3687848 ccgccggcccgcgccagcgcg 3687828
>gb|M92914.1|DROMASTM Drosophila virilis mastermind gene, complete cds Length = 5650 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 5375 atcaccaccaccaccaacacc 5395
>emb|AL772376.6| Mouse DNA sequence from clone RP23-30F6 on chromosome 4, complete sequence Length = 237323 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 216880 atcaccaccaccaccaacacc 216900
>gb|AC142104.4| Mus musculus BAC clone RP24-313C11 from 8, complete sequence Length = 157626 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 128092 atcaccaccaccaccaacacc 128112
>gb|AC141469.4| Mus musculus BAC clone RP24-439P5 from 5, complete sequence Length = 183468 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 50735 atcaccaccaccaccaacacc 50755
>gb|AC160104.2| Mus musculus BAC clone RP24-330A11 from chromosome 9, complete sequence Length = 223326 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 caccaccaccaccaacaccct 23 ||||||||||||||||||||| Sbjct: 138693 caccaccaccaccaacaccct 138673
>gb|U28645.1|PVU28645 Phaseolus vulgaris embryo-specific acidic transcriptional activator PvAlf mRNA, complete cds Length = 2492 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 3 caccaccaccaccaacaccctcttcctct 31 |||||||||||||| |||| ||||||||| Sbjct: 788 caccaccaccaccaccaccttcttcctct 760
>emb|AL845167.7| Mouse DNA sequence from clone RP23-36P16 on chromosome X, complete sequence Length = 162237 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 66773 atcaccaccaccaccaacacc 66793
>gb|L24487.1|SH1DNAPOLA Pseudorabies virus DNA polymerase gene, partial cds Length = 3144 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 359 ccgccggcccgcgccagcgcggcgtcatc 387 |||| ||||||||| |||||||||||||| Sbjct: 1394 ccgcgggcccgcgcgagcgcggcgtcatc 1422
>gb|M76671.1|TOMEXTENB L.esculentum extensin (class II) gene, complete cds Length = 1900 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 1222 atcaccaccaccaccaacacc 1242
>dbj|AP001046.1| Homo sapiens genomic DNA, chromosome 21, clone:KB43F12, MX1-D21S171 region, complete sequence Length = 158063 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacacc 21 ||||||||||||||||||||| Sbjct: 69790 atcaccaccaccaccaacacc 69810
>dbj|AB085836.1| Phaseolus vulgaris PvALF mRNA for abscisic acid insensitive 3-like factor, complete cds Length = 2455 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 3 caccaccaccaccaacaccctcttcctct 31 |||||||||||||| |||| ||||||||| Sbjct: 751 caccaccaccaccaccaccttcttcctct 723
>ref|XM_638616.1| Dictyostelium discoideum transforming acidic coiled-coil-containing protein (DDB0220500), partial mRNA Length = 4437 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacac 20 |||||||||||||||||||| Sbjct: 3813 atcaccaccaccaccaacac 3832
>ref|XM_636578.1| Dictyostelium discoideum hypothetical protein (DDB0205813), partial mRNA Length = 3690 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacac 20 |||||||||||||||||||| Sbjct: 732 atcaccaccaccaccaacac 751
>ref|XM_522616.1| PREDICTED: Pan troglodytes gap junction protein, alpha 3, 46kDa (connexin 46) (LOC467218), mRNA Length = 1308 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tcagctgctcctcctcctcc 61 |||||||||||||||||||| Sbjct: 346 tcagctgctcctcctcctcc 327
>ref|XM_475544.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 351 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaggcgagctgctgctgccg 85 |||||||||||||||||||| Sbjct: 51 gaggcgagctgctgctgccg 32
>ref|NM_185037.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2175 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 cggcgtcatctccggcctcctcaa 401 ||||||||||||||||||| |||| Sbjct: 315 cggcgtcatctccggcctcatcaa 338
>gb|BT017098.1| Zea mays clone EL01N0361G07.c mRNA sequence Length = 966 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tcaccaccaccaccaacacc 21 |||||||||||||||||||| Sbjct: 226 tcaccaccaccaccaacacc 245
>gb|AC079021.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0008A07, complete sequence Length = 135809 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaggcgagctgctgctgccg 85 |||||||||||||||||||| Sbjct: 130828 gaggcgagctgctgctgccg 130809 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gaggcgagctgctgctgccg 85 |||||||||||||||||||| Sbjct: 104443 gaggcgagctgctgctgccg 104462
>gb|U40410.1| Caenorhabditis elegans cosmid C54G7, complete sequence Length = 40270 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tcaccaccaccaccaacacc 21 |||||||||||||||||||| Sbjct: 24721 tcaccaccaccaccaacacc 24740
>gb|CP000081.1| Leishmania major chromosome 35, complete sequence Length = 2090491 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 ccgcgtcatcgccgccgacg 352 |||||||||||||||||||| Sbjct: 660572 ccgcgtcatcgccgccgacg 660553
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 354 cgcgcccgccggcccgcgcc 373 |||||||||||||||||||| Sbjct: 790796 cgcgcccgccggcccgcgcc 790815
>gb|AC145810.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0059C14, complete sequence Length = 142138 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 gcgcgctcgctcggccgctg 266 |||||||||||||||||||| Sbjct: 112930 gcgcgctcgctcggccgctg 112949
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 ccgacgacgcgcccgccggc 366 |||||||||||||||||||| Sbjct: 2065358 ccgacgacgcgcccgccggc 2065339
>gb|AC084156.2| Caenorhabditis elegans cosmid Y46E12BL, complete sequence Length = 46000 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tcaccaccaccaccaacacc 21 |||||||||||||||||||| Sbjct: 35863 tcaccaccaccaccaacacc 35844
>gb|AC104215.11| Mus musculus chromosome 7, clone RP23-44I18, complete sequence Length = 235147 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacac 20 |||||||||||||||||||| Sbjct: 145877 atcaccaccaccaccaacac 145896
>gb|AC095996.9| Rattus norvegicus 18 BAC CH230-13K4 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 54068 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccctcttcctc 30 |||||||||||||| |||| |||||||| Sbjct: 49869 caccaccaccaccaccaccttcttcctc 49896
>gb|AC146521.2| Oryza sativa chromosome 3 B1246D11 genomic sequence, complete sequence Length = 43277 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 333 ccgcgtcatcgccgccgacgacgc 356 ||||||| |||||||||||||||| Sbjct: 32448 ccgcgtcgtcgccgccgacgacgc 32471
>ref|XM_322365.1| Neurospora crassa OR74A predicted protein (NCU00280.1) partial mRNA Length = 2820 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 caacaagctcgcggacgcgc 250 |||||||||||||||||||| Sbjct: 912 caacaagctcgcggacgcgc 931
>gb|BC033818.1| Homo sapiens chromosome 20 open reading frame 102, mRNA (cDNA clone MGC:45439 IMAGE:5201150), complete cds Length = 1950 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 ggcccgccggccacgcgccc 474 |||||||||||||||||||| Sbjct: 263 ggcccgccggccacgcgccc 282
>ref|XM_952658.1| Neurospora crassa OR74A hypothetical protein (NCU00280.1) partial mRNA Length = 2820 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 caacaagctcgcggacgcgc 250 |||||||||||||||||||| Sbjct: 912 caacaagctcgcggacgcgc 931
>gb|AC120141.9| Mus musculus chromosome 5, clone RP24-285N11, complete sequence Length = 134166 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacac 20 |||||||||||||||||||| Sbjct: 68411 atcaccaccaccaccaacac 68430
>ref|XM_586318.2| PREDICTED: Bos taurus similar to ninjurin 1 (LOC509375), mRNA Length = 1265 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 cctcagctgctcctcctcct 59 |||||||||||||||||||| Sbjct: 848 cctcagctgctcctcctcct 867
>ref|XM_705613.1| Candida albicans SC5314 putative exosome component Mtr3p (CaO19.168), mRNA Length = 876 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacac 20 |||||||||||||||||||| Sbjct: 79 atcaccaccaccaccaacac 98
>ref|XM_455475.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F08701g predicted mRNA Length = 1041 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 caccaacaccctcttcctct 31 |||||||||||||||||||| Sbjct: 389 caccaacaccctcttcctct 408
>ref|NM_080607.1| Homo sapiens chromosome 20 open reading frame 102 (C20orf102), mRNA Length = 1952 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 ggcccgccggccacgcgccc 474 |||||||||||||||||||| Sbjct: 324 ggcccgccggccacgcgccc 343
>gb|AC004417.1| Homo sapiens BAC clone CTA-325M7 from 7, complete sequence Length = 127514 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccc 22 |||||||||||||||||||| Sbjct: 122508 caccaccaccaccaacaccc 122527
>ref|XM_860887.1| PREDICTED: Canis familiaris similar to stromal cell derived factor receptor 1, transcript variant 3 (LOC609224), mRNA Length = 564 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 ggcccgccggccacgcgccc 474 |||||||||||||||||||| Sbjct: 77 ggcccgccggccacgcgccc 96
>ref|XM_860868.1| PREDICTED: Canis familiaris similar to stromal cell derived factor receptor 1, transcript variant 2 (LOC609224), mRNA Length = 609 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 ggcccgccggccacgcgccc 474 |||||||||||||||||||| Sbjct: 77 ggcccgccggccacgcgccc 96
>ref|XM_847473.1| PREDICTED: Canis familiaris similar to stromal cell derived factor receptor 1, transcript variant 1 (LOC609224), mRNA Length = 742 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 ggcccgccggccacgcgccc 474 |||||||||||||||||||| Sbjct: 77 ggcccgccggccacgcgccc 96
>ref|XM_838164.1| Leishmania major strain Friedlin hypothetical protein (LMJ_1081) partial mRNA Length = 1857 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 333 ccgcgtcatcgccgccgacg 352 |||||||||||||||||||| Sbjct: 1523 ccgcgtcatcgccgccgacg 1542
>gb|AC122414.4| Mus musculus BAC clone RP24-150D8 from chromosome 5, complete sequence Length = 186986 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacac 20 |||||||||||||||||||| Sbjct: 36214 atcaccaccaccaccaacac 36233
>ref|XM_800613.1| Trypanosoma cruzi strain CL Brener protein kinase (Tc00.1047053508205.30) partial mRNA Length = 1248 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 3 caccaccaccaccaacaccctcttcctc 30 |||||||||||||| |||||||||||| Sbjct: 1024 caccaccaccaccattaccctcttcctc 997
>ref|XM_802041.1| Trypanosoma cruzi strain CL Brener protein kinase (Tc00.1047053506123.30) partial mRNA Length = 1419 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 3 caccaccaccaccaacaccctcttcctc 30 |||||||||||||| |||||||||||| Sbjct: 1204 caccaccaccaccattaccctcttcctc 1177
>ref|XM_805805.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053509059.40) partial mRNA Length = 5583 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 3 caccaccaccaccaacac--cctcttcctct 31 |||||||||||||||||| ||||||||||| Sbjct: 33 caccaccaccaccaacactacctcttcctct 63
>gb|AC159814.2| Mus musculus BAC clone RP23-389H15 from chromosome 12, complete sequence Length = 209280 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 2 tcaccaccaccaccaacacc 21 |||||||||||||||||||| Sbjct: 21444 tcaccaccaccaccaacacc 21425
>gb|AC146013.2| Pan troglodytes BAC clone RP43-128F23 from 7, complete sequence Length = 191821 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tcaccaccaccaccaacacc 21 |||||||||||||||||||| Sbjct: 39401 tcaccaccaccaccaacacc 39420
>gb|AC104323.27| Mus musculus strain C57BL/6J chromosome 17 clone rp23-114o8 map 17, complete sequence Length = 202430 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 caccaccaccaccaacaccctctt 26 |||||||||||||| ||||||||| Sbjct: 174828 caccaccaccaccaccaccctctt 174805
>gb|AC163332.3| Mus musculus chromosome 15, clone RP24-344C17, complete sequence Length = 164408 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 caccaccaccaccaacaccc 22 |||||||||||||||||||| Sbjct: 9463 caccaccaccaccaacaccc 9444
>ref|NM_021954.2| Homo sapiens gap junction protein, alpha 3, 46kDa (connexin 46) (GJA3), mRNA Length = 1308 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tcagctgctcctcctcctcc 61 |||||||||||||||||||| Sbjct: 346 tcagctgctcctcctcctcc 327
>emb|AL596442.33| Human DNA sequence from clone RP11-302L19 on chromosome 6 Contains a novel gene, a ribosomal protein L12 (RPL12) and five CpG islands, complete sequence Length = 110817 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacaccctc 24 |||||||||||||||| ||||||| Sbjct: 76649 atcaccaccaccaccatcaccctc 76626
>emb|AL590133.32| Human DNA sequence from clone RP11-316M1 on chromosome 1 Contains the SETDB1 gene for SET domain, bifurcated 1, the LASS2 gene for LAG1 longevity assurance homolog 2 (S. cerevisiae), the ANXA9 gene for annexin A9, the gene for a novel protein (FLJ11280), the gene for TcD37 homolog (HTCD37), the BNIPL gene for BCL2/adenovirus E1B 19kD interacting protein like, the gene for a novel protein (FLJ20519), the gene for small protein effector 1 of Cdc42 (SPEC1), the gene for ALL1-fused gene from chromosome 1q (AF1Q), two novel genes, the 5' end of a novel gene (MGC29891) and two CpG islands, complete sequence Length = 192096 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 cggcgccaggcccgccggcc 466 |||||||||||||||||||| Sbjct: 60563 cggcgccaggcccgccggcc 60582
>emb|AL451084.19| Human DNA sequence from clone RP11-357H24 on chromosome 10 Contains the 3' end of the TCF7L2 gene for transcription factor 7-like 2 (T-cell specific, HMG-box), complete sequence Length = 183815 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacac 20 |||||||||||||||||||| Sbjct: 144107 atcaccaccaccaccaacac 144088
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 cgccggcccgcgccagcgcg 379 |||||||||||||||||||| Sbjct: 1236404 cgccggcccgcgccagcgcg 1236385
>emb|AL138688.27| Human DNA sequence from clone RP11-264J4 on chromosome 13 Contains the 3' end of the ZNF198 gene for zinc finger protein 198, a novel gene, the GJA3 gene for gap junction protein, alpha3, 46kD (connexin 46), a peptidylpropyl isomerase D (cylophilin D) (PPID) pseudogene, the GJB2 gene for gap junction protein beta 2, 26 kD (connexin 26) and 6 CpG islands, complete sequence Length = 127794 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tcagctgctcctcctcctcc 61 |||||||||||||||||||| Sbjct: 68476 tcagctgctcctcctcctcc 68495
>emb|AL109964.20|HS1118M15 Human DNA sequence from clone RP5-1118M15 on chromosome 20 Contains the 3' end of the CTNNBL1 gene for catenin beta like 1, the C20orf102 gene for a novel Immunoglobulin domain-containing protein and a CpG Island, complete sequence Length = 95851 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 ggcccgccggccacgcgccc 474 |||||||||||||||||||| Sbjct: 34180 ggcccgccggccacgcgccc 34199
>gb|AC092406.3| Papio anubis clone RP41-326L21, complete sequence Length = 192030 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacac 20 |||||||||||||||||||| Sbjct: 133331 atcaccaccaccaccaacac 133350
>gb|AC162857.5| Mus musculus chromosome 15, clone RP23-333C11, complete sequence Length = 224913 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 caccaccaccaccaacaccc 22 |||||||||||||||||||| Sbjct: 215470 caccaccaccaccaacaccc 215451
>ref|XM_966237.1| PREDICTED: Tribolium castaneum similar to CG11966-PA (LOC659973), mRNA Length = 1467 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccc 22 |||||||||||||||||||| Sbjct: 1158 caccaccaccaccaacaccc 1177
>emb|Z46971.2|LMLAPGN Leishmania mexicana MBAP gene for membrane-bound acid phosphatase Length = 6824 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 caccaccaccaccaacaccctctt 26 |||||||||||||| ||||||||| Sbjct: 465 caccaccaccaccaccaccctctt 442
>emb|Z48001.1|TTNUSAINF T.thermophilus nusA/infB operon DNA Length = 5135 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 cgtcatcgccgccgacgacg 355 |||||||||||||||||||| Sbjct: 2671 cgtcatcgccgccgacgacg 2690
>gb|AE008830.1| Salmonella typhimurium LT2, section 134 of 220 of the complete genome Length = 20890 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 cccgcgccagcgcggcgtca 385 |||||||||||||||||||| Sbjct: 17639 cccgcgccagcgcggcgtca 17620
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 348 cgacgacgcgcccgccggcccgcgccagcgcg 379 |||||||| || ||||||||||| |||||||| Sbjct: 4151733 cgacgacgagcgcgccggcccgcaccagcgcg 4151764
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 caccaacaccctcttcctct 31 |||||||||||||||||||| Sbjct: 811500 caccaacaccctcttcctct 811519
>emb|BX538352.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 3/4 Length = 293050 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacac 20 |||||||||||||||||||| Sbjct: 177502 atcaccaccaccaccaacac 177483
>emb|AL627276.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 12/20 Length = 274050 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 cccgcgccagcgcggcgtca 385 |||||||||||||||||||| Sbjct: 158560 cccgcgccagcgcggcgtca 158541
>emb|CR857801.1| Pongo pygmaeus mRNA; cDNA DKFZp459C0762 (from clone DKFZp459C0762) Length = 2196 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 cggcgccaggcccgccggcc 466 |||||||||||||||||||| Sbjct: 29 cggcgccaggcccgccggcc 10
>gb|AC068413.11| Homo sapiens chromosome 8, clone RP11-273I9, complete sequence Length = 157865 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacaccctcttcctcta 32 |||||||||||||||| |||| || ||||||| Sbjct: 109128 atcaccaccaccaccaccaccatcctcctcta 109097
>emb|AL834410.1|HSM805494 Homo sapiens mRNA; cDNA DKFZp547M044 (from clone DKFZp547M044) Length = 1962 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 ggcccgccggccacgcgccc 474 |||||||||||||||||||| Sbjct: 306 ggcccgccggccacgcgccc 325
>dbj|AP006335.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT03N08, TM0292, complete sequence Length = 95495 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 accaccaccaccaacaccct 23 |||||||||||||||||||| Sbjct: 56685 accaccaccaccaacaccct 56666
>dbj|AK056177.1| Homo sapiens cDNA FLJ31615 fis, clone NT2RI2003011 Length = 1952 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 ggcccgccggccacgcgccc 474 |||||||||||||||||||| Sbjct: 324 ggcccgccggccacgcgccc 343
>gb|AF397033.1| Pisum sativum clone PsEXT3.29 root nodule extensin mRNA, partial cds Length = 563 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccc 22 |||||||||||||||||||| Sbjct: 86 caccaccaccaccaacaccc 105
>dbj|AK222303.1| Ciona intestinalis cDNA, clone:ciad096p21, full insert sequence Length = 3050 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 accctcttcctctacccgca 38 |||||||||||||||||||| Sbjct: 120 accctcttcctctacccgca 101
>gb|AC026801.7| Homo sapiens chromosome 5 clone CTD-2517O10, complete sequence Length = 177284 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 3 caccaccaccaccaacaccctcttcctc 30 |||||||||||||| ||||||| ||||| Sbjct: 105527 caccaccaccaccaccaccctcatcctc 105500
>gb|AC091733.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0048F08, from chromosome 3, complete sequence Length = 155790 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 333 ccgcgtcatcgccgccgacgacgc 356 ||||||| |||||||||||||||| Sbjct: 154 ccgcgtcgtcgccgccgacgacgc 177
>gb|AC011626.8| Homo sapiens chromosome 8, clone RP11-369K17, complete sequence Length = 184547 Score = 40.1 bits (20), Expect = 6.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacaccctcttcctcta 32 |||||||||||||||| |||| || ||||||| Sbjct: 173967 atcaccaccaccaccaccaccatcctcctcta 173998
>ref|XM_627731.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd6_3940), partial mRNA Length = 891 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacac 20 |||||||||||||||||||| Sbjct: 615 atcaccaccaccaccaacac 634
>gb|AC026724.3| Homo sapiens chromosome 5 clone CTD-2229I16, complete sequence Length = 156254 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tcaccaccaccaccaacacc 21 |||||||||||||||||||| Sbjct: 3347 tcaccaccaccaccaacacc 3366
>gb|BC111141.1| Bos taurus cDNA clone MGC:134510 IMAGE:8058206, complete cds Length = 1272 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 cctcagctgctcctcctcct 59 |||||||||||||||||||| Sbjct: 719 cctcagctgctcctcctcct 738
>gb|BC105267.1| Bos taurus cDNA clone MGC:128981 IMAGE:8120829, complete cds Length = 1968 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 455 ggcccgccggccacgcgccc 474 |||||||||||||||||||| Sbjct: 292 ggcccgccggccacgcgccc 311
>gb|DQ239904.1| Sus scrofa protein phosphatase 1 regulatory subunit 3D (PPP1R3D) gene, exon 1 and partial cds Length = 319 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 gcgcccgccggcccgcgcca 374 |||||||||||||||||||| Sbjct: 249 gcgcccgccggcccgcgcca 230
>gb|AC153557.8| Mus musculus 10 BAC RP23-203H20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 233640 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacaccctc 24 |||||||||||||||| ||||||| Sbjct: 121117 atcaccaccaccaccatcaccctc 121140
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 gcgcgctcgctcggccgctg 266 |||||||||||||||||||| Sbjct: 8814159 gcgcgctcgctcggccgctg 8814178
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gctgctcctcctcctccgcg 64 |||||||||||||||||||| Sbjct: 16980321 gctgctcctcctcctccgcg 16980302 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 tcgccgccgacgacgcgccc 360 |||||||||||||||||||| Sbjct: 7178115 tcgccgccgacgacgcgccc 7178134
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaggcgagctgctgctgccg 85 |||||||||||||||||||| Sbjct: 17332104 gaggcgagctgctgctgccg 17332085
>gb|AC130686.15| Homo sapiens chromosome 17, clone RP13-415G19, complete sequence Length = 208462 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccc 22 |||||||||||||||||||| Sbjct: 114661 caccaccaccaccaacaccc 114680
>emb|BX005183.9| Zebrafish DNA sequence from clone CH211-136A14 in linkage group 3, complete sequence Length = 168366 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tcaccaccaccaccaacacc 21 |||||||||||||||||||| Sbjct: 135213 tcaccaccaccaccaacacc 135232
>dbj|AB210806.1| Ciona intestinalis mRNA for zinc finger protein, complete cds, clone: cima853l09 Length = 3012 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 accctcttcctctacccgca 38 |||||||||||||||||||| Sbjct: 105 accctcttcctctacccgca 86
>gb|AC157599.3| Mus musculus BAC clone RP23-138L13 from chromosome 17, complete sequence Length = 185556 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacac 20 |||||||||||||||||||| Sbjct: 40423 atcaccaccaccaccaacac 40404
>gb|AC102408.10| Mus musculus chromosome 15, clone RP24-351C14, complete sequence Length = 190773 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccc 22 |||||||||||||||||||| Sbjct: 69783 caccaccaccaccaacaccc 69802
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 ccgctcgtcgacgacgcctg 320 |||||||||||||||||||| Sbjct: 1647917 ccgctcgtcgacgacgcctg 1647898
>gb|AE004865.1| Pseudomonas aeruginosa PAO1, section 426 of 529 of the complete genome Length = 10413 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgacgacgcgcccgccggcc 367 |||||||||||||||||||| Sbjct: 3065 cgacgacgcgcccgccggcc 3046
>gb|AC104321.7| Oryza sativa chromosome 3 BAC OSJNBa0052F07 genomic sequence, complete sequence Length = 139823 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 378 cggcgtcatctccggcctcctcaa 401 ||||||||||||||||||| |||| Sbjct: 66846 cggcgtcatctccggcctcatcaa 66823
>gb|AC025580.8| Homo sapiens chromosome 15 clone RP11-519G16 map 15q21.1, complete sequence Length = 200803 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 atcaccaccaccaccaacac 20 |||||||||||||||||||| Sbjct: 130355 atcaccaccaccaccaacac 130374
>gb|AC098691.2| Homo sapiens chromosome 1 clone RP11-509K22, complete sequence Length = 166885 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 ccgccggcccgcgccagcgc 378 |||||||||||||||||||| Sbjct: 70006 ccgccggcccgcgccagcgc 69987
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 cccgcgccagcgcggcgtca 385 |||||||||||||||||||| Sbjct: 2823092 cccgcgccagcgcggcgtca 2823073
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 cgtcatcgccgccgacgacg 355 |||||||||||||||||||| Sbjct: 663630 cgtcatcgccgccgacgacg 663611
>dbj|AP003620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H06 Length = 142832 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaggcgagctgctgctgccg 85 |||||||||||||||||||| Sbjct: 68697 gaggcgagctgctgctgccg 68678
>dbj|AP005393.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0488D02 Length = 154537 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gctgctcctcctcctccgcg 64 |||||||||||||||||||| Sbjct: 110134 gctgctcctcctcctccgcg 110115
>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1381_H04 Length = 130961 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 tcgccgccgacgacgcgccc 360 |||||||||||||||||||| Sbjct: 30220 tcgccgccgacgacgcgccc 30239
>dbj|AP004756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0592C05 Length = 150478 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 tcgccgccgacgacgcgccc 360 |||||||||||||||||||| Sbjct: 130194 tcgccgccgacgacgcgccc 130213
>dbj|AK120586.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013140B05, full insert sequence Length = 1760 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 gctgctcctcctcctccgcg 64 |||||||||||||||||||| Sbjct: 463 gctgctcctcctcctccgcg 482
>ref|XM_317034.2| Anopheles gambiae str. PEST ENSANGP00000019277 (ENSANGG00000016788), partial mRNA Length = 2889 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccc 22 |||||||||||||||||||| Sbjct: 99 caccaccaccaccaacaccc 118
>emb|AJ339000.1|HSA339000 Homo sapiens genomic sequence surrounding NotI site, clone NL1-ZL20C Length = 797 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 cggcgccaggcccgccggcc 466 |||||||||||||||||||| Sbjct: 66 cggcgccaggcccgccggcc 47
>emb|AJ339582.1|HSA339582 Homo sapiens genomic sequence surrounding NotI site, clone NL1-ZM20C Length = 750 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 cggcgccaggcccgccggcc 466 |||||||||||||||||||| Sbjct: 66 cggcgccaggcccgccggcc 47
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 427 cccttcggccactgcgacgccggc 450 |||||||||| ||||||||||||| Sbjct: 29119 cccttcggccgctgcgacgccggc 29142
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 368 cgcgccagcgcggcgtcatctccg 391 |||||||| ||||||||||||||| Sbjct: 1022984 cgcgccagagcggcgtcatctccg 1023007
>dbj|AK065724.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013041I23, full insert sequence Length = 2316 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gaggcgagctgctgctgccg 85 |||||||||||||||||||| Sbjct: 131 gaggcgagctgctgctgccg 112
>dbj|AK064790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000C06, full insert sequence Length = 2309 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 378 cggcgtcatctccggcctcctcaa 401 ||||||||||||||||||| |||| Sbjct: 325 cggcgtcatctccggcctcatcaa 348
>dbj|AK064738.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-C12, full insert sequence Length = 848 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 tcgccgccgacgacgcgccc 360 |||||||||||||||||||| Sbjct: 196 tcgccgccgacgacgcgccc 177
>gb|AC153868.3| Mus musculus BAC RP23-384D16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 211603 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tcagctgctcctcctcctcc 61 |||||||||||||||||||| Sbjct: 151799 tcagctgctcctcctcctcc 151818
>gb|AC153578.4| Mus musculus 6 BAC RP23-218P2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 228417 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tcagctgctcctcctcctcc 61 |||||||||||||||||||| Sbjct: 73218 tcagctgctcctcctcctcc 73237
>gb|AF075290.1|AF075290 Homo sapiens gap-junction protein alpha 3 (GJA3) gene, complete cds Length = 1308 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 tcagctgctcctcctcctcc 61 |||||||||||||||||||| Sbjct: 346 tcagctgctcctcctcctcc 327
>gb|AF128999.1|AF128999 Salmonella typhimurium SitA (sitA), SitB (sitB), SitC (sitC), and SitD (sitD) genes, complete cds Length = 4000 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 cccgcgccagcgcggcgtca 385 |||||||||||||||||||| Sbjct: 1608 cccgcgccagcgcggcgtca 1589
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 cccgcgccagcgcggcgtca 385 |||||||||||||||||||| Sbjct: 2846417 cccgcgccagcgcggcgtca 2846398
>emb|AJ430034.1|HSA430034 Homo sapiens partial MUC4 gene for mucin 4, exons 5-25 Length = 25773 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 atcaccaccaccaccaacac 20 |||||||||||||||||||| Sbjct: 5347 atcaccaccaccaccaacac 5328
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 366 cccgcgccagcgcggcgtca 385 |||||||||||||||||||| Sbjct: 2962084 cccgcgccagcgcggcgtca 2962065
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 ccgacgacgcgcccgccggc 366 |||||||||||||||||||| Sbjct: 907394 ccgacgacgcgcccgccggc 907413
>ref|NM_001038082.1| Bos taurus similar to ninjurin 1 (MGC134510), mRNA Length = 1272 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 cctcagctgctcctcctcct 59 |||||||||||||||||||| Sbjct: 719 cctcagctgctcctcctcct 738
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 gcgcgctcgctcggccgctg 266 |||||||||||||||||||| Sbjct: 8884922 gcgcgctcgctcggccgctg 8884941
>emb|CT025540.12| Mouse DNA sequence from clone RP24-280B23 on chromosome 12, complete sequence Length = 199060 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 tcaccaccaccaccaacacc 21 |||||||||||||||||||| Sbjct: 32827 tcaccaccaccaccaacacc 32846
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 cgtcatcgccgccgacgacg 355 |||||||||||||||||||| Sbjct: 334175 cgtcatcgccgccgacgacg 334156
>gb|AF051690.1|AF051690 Pseudomonas aeruginosa iron-uptake factor (piuC), hydroxamate-type ferrisiderophore receptor (piuA), and iron-uptake factor (piuB) genes, complete cds Length = 7701 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 cgacgacgcgcccgccggcc 367 |||||||||||||||||||| Sbjct: 5272 cgacgacgcgcccgccggcc 5291
>emb|CT025573.9| Mouse DNA sequence from clone RP24-274P18 on chromosome 17, complete sequence Length = 210893 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 caccaccaccaccaacaccctctt 26 |||||||||||||| ||||||||| Sbjct: 149281 caccaccaccaccaccaccctctt 149304
>dbj|AP006686.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT18K09, TM0380, complete sequence Length = 88931 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 accaccaccaccaacaccct 23 |||||||||||||||||||| Sbjct: 84565 accaccaccaccaacaccct 84584
>dbj|AP006147.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT36E18, TM0288, complete sequence Length = 112234 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 caccaccaccaacaccctct 25 |||||||||||||||||||| Sbjct: 21775 caccaccaccaacaccctct 21756
>emb|AL845449.4| Mouse DNA sequence from clone RP23-211M20 on chromosome 2, complete sequence Length = 226324 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 aatcctccagtcgagaatgc 136 |||||||||||||||||||| Sbjct: 98294 aatcctccagtcgagaatgc 98313 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,119,777 Number of Sequences: 3902068 Number of extensions: 5119777 Number of successful extensions: 281839 Number of sequences better than 10.0: 220 Number of HSP's better than 10.0 without gapping: 231 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 271827 Number of HSP's gapped (non-prelim): 9749 length of query: 491 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 469 effective length of database: 17,147,199,772 effective search space: 8042036693068 effective search space used: 8042036693068 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)