ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet100f05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, trac... 35 0.12
2TAUB_YERPS (Q664P8) Taurine import ATP-binding protein tauB (EC ... 32 0.99
3TAUB_YERPE (Q8ZJD0) Taurine import ATP-binding protein tauB (EC ... 32 0.99
4CPN_DROME (Q02910) Calphotin 29 6.4
5GPDA_MYCTU (P95113) Glycerol-3-phosphate dehydrogenase [NAD(P)+]... 28 8.4
6GPDA_MYCBO (P59961) Glycerol-3-phosphate dehydrogenase [NAD(P)+]... 28 8.4
7PTFBC_HAEIN (P44714) PTS system fructose-specific EIIBC componen... 28 8.4

>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 10/52 (19%)
 Frame = +1

Query: 16   AGSTSPSLPGLA--CLVARSQIPTTC--------SSPPAFFPTTGAEKQASP 141
            AGST P++PG+A   L  RS +P T         S PP   PTT A  +A P
Sbjct: 1679 AGSTEPTVPGVATSTLPTRSALPGTTGSLGTWRPSQPPTLAPTTMATSRARP 1730



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>TAUB_YERPS (Q664P8) Taurine import ATP-binding protein tauB (EC 3.6.3.36)|
          Length = 255

 Score = 31.6 bits (70), Expect = 0.99
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = -1

Query: 194 GSSQSQRRLTALFVVGIWGLACFSAPVVGKNAGGEEQVVGI 72
           G S+ QRR+TAL ++   GLA F    + + +GG  Q VGI
Sbjct: 99  GMSKEQRRVTALKMLNRVGLAGFEHHFIWQLSGGMRQRVGI 139



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>TAUB_YERPE (Q8ZJD0) Taurine import ATP-binding protein tauB (EC 3.6.3.36)|
          Length = 255

 Score = 31.6 bits (70), Expect = 0.99
 Identities = 18/41 (43%), Positives = 25/41 (60%)
 Frame = -1

Query: 194 GSSQSQRRLTALFVVGIWGLACFSAPVVGKNAGGEEQVVGI 72
           G S+ QRR+TAL ++   GLA F    + + +GG  Q VGI
Sbjct: 99  GMSKEQRRVTALKMLNRVGLAGFEHHFIWQLSGGMRQRVGI 139



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>CPN_DROME (Q02910) Calphotin|
          Length = 864

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = +1

Query: 22  STSPSLPGLACLVARSQIP--TTCSSPPAFFPTTGAEKQASPQIPTTKRAVNXXXXXXXP 195
           +T+P  P LA +VA SQ+   T  ++PP   P    E  A P +  T    +       P
Sbjct: 294 TTAPETPALAPVVAESQVAANTVVATPPT--PAPEPETIAPPVVAETPEVASVAVAETTP 351

Query: 196 *I*P 207
            + P
Sbjct: 352 PVVP 355



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>GPDA_MYCTU (P95113) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 334

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 22/83 (26%), Positives = 31/83 (37%)
 Frame = +3

Query: 78  NYLFFAAGVLPNYGCGKAXXXXXXXXXXXXXXXLALAATVDLALFSFLDNLGSVVIGCTS 257
           N +  A G+    G G+                L  A   + A  + L  +G +V  CTS
Sbjct: 196 NIIALACGMAVGIGLGENTAAAIITRGLAEIIRLGTALGANGATLAGLAGVGDLVATCTS 255

Query: 258 PQLNS*RERGASRVPGGRLGGGD 326
           P       R  +R  G RLG G+
Sbjct: 256 P-------RSRNRSFGERLGRGE 271



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>GPDA_MYCBO (P59961) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 334

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 22/83 (26%), Positives = 31/83 (37%)
 Frame = +3

Query: 78  NYLFFAAGVLPNYGCGKAXXXXXXXXXXXXXXXLALAATVDLALFSFLDNLGSVVIGCTS 257
           N +  A G+    G G+                L  A   + A  + L  +G +V  CTS
Sbjct: 196 NIIALACGMAVGIGLGENTAAAIITRGLAEIIRLGTALGANGATLAGLAGVGDLVATCTS 255

Query: 258 PQLNS*RERGASRVPGGRLGGGD 326
           P       R  +R  G RLG G+
Sbjct: 256 P-------RSRNRSFGERLGRGE 271



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>PTFBC_HAEIN (P44714) PTS system fructose-specific EIIBC component (EIIBC-Fru)|
           [Includes: Fructose-specific phosphotransferase enzyme
           IIB component (EC 2.7.1.69) (PTS system
           fructose-specific EIIB component) (EIII-Fru); Fructose
           permease IIC component (PT
          Length = 556

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -2

Query: 103 TPAAKNK*LGFGIVRPSKPTLVGKEMWI 20
           TPA  +  L FG V P+ P LVGK+++I
Sbjct: 37  TPAEADLVLVFGSVLPNNPDLVGKKVFI 64


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,594,482
Number of Sequences: 219361
Number of extensions: 1017677
Number of successful extensions: 3004
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2998
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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