ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet100e08 |
|---|---|
| Clone Library Name | barley_pub |
>UPTG1_SOLTU (Q9SC19) Alpha-1,4-glucan-protein synthase [UDP-forming] 1 (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase 1) (UPTG 1) Length = 365 Score = 295 bits (756), Expect = 3e-80 Identities = 135/152 (88%), Positives = 146/152 (96%) Frame = +2 Query: 2 VIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTRTVMVPEGFDYELYNRNDINRILGPKAS 181 VIPTIRNLDFLEMWRPFFQPYHLIIVQDGDP++ + VPEGFDYELYNRNDINRILGPKAS Sbjct: 15 VIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIIKVPEGFDYELYNRNDINRILGPKAS 74 Query: 182 CISFKDSARRCFGYMVSKKKYVYTIDDDCFVAKDPTGKDIDALAKHIQNLLCPSTPLFFN 361 CISFKDSA RCFGYMVSKKKY+YTIDDDCFVAKDP+GKDI+AL +HI+NLLCPSTP FFN Sbjct: 75 CISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPHFFN 134 Query: 362 TLYDPYQEGADFVRGYPFSLREGVPTAVSHGL 457 TLYDPY++GADFVRGYPFS+REG PTAVSHGL Sbjct: 135 TLYDPYRDGADFVRGYPFSMREGAPTAVSHGL 166
>UPTG2_SOLTU (Q8RU27) Alpha-1,4-glucan-protein synthase [UDP-forming] 2 (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase 2) (UPTG 2) Length = 366 Score = 293 bits (750), Expect = 1e-79 Identities = 135/152 (88%), Positives = 145/152 (95%) Frame = +2 Query: 2 VIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTRTVMVPEGFDYELYNRNDINRILGPKAS 181 VIPTIRNLDFLEMWRPFFQPYHLIIVQDGDP++ + VPEGFDYELYNRNDINRILGPKAS Sbjct: 19 VIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIINVPEGFDYELYNRNDINRILGPKAS 78 Query: 182 CISFKDSARRCFGYMVSKKKYVYTIDDDCFVAKDPTGKDIDALAKHIQNLLCPSTPLFFN 361 CISFKDSA RCFGYMVSKKKY+YTIDDDCFVAKDP+GKDI+AL +HI+NLLCPSTP FFN Sbjct: 79 CISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPHFFN 138 Query: 362 TLYDPYQEGADFVRGYPFSLREGVPTAVSHGL 457 TLYDPY+EGADFVRGYPFS+REG TAVSHGL Sbjct: 139 TLYDPYREGADFVRGYPFSMREGAATAVSHGL 170
>UPTG_MAIZE (P80607) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Amylogenin) (Golgi-associated protein se-wap41) Length = 364 Score = 292 bits (747), Expect = 3e-79 Identities = 136/152 (89%), Positives = 144/152 (94%) Frame = +2 Query: 2 VIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTRTVMVPEGFDYELYNRNDINRILGPKAS 181 VIPTIRNLDFLEMWR FFQPYHLIIVQDGDPT+T+ VPEGFDYELYNRNDINRILGPKAS Sbjct: 25 VIPTIRNLDFLEMWRAFFQPYHLIIVQDGDPTKTIKVPEGFDYELYNRNDINRILGPKAS 84 Query: 182 CISFKDSARRCFGYMVSKKKYVYTIDDDCFVAKDPTGKDIDALAKHIQNLLCPSTPLFFN 361 CISFKDSA RCFGYMVSKKKY+YTIDDDCFVAKDP+GKDI+AL +HI+NLL PSTP FFN Sbjct: 85 CISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTPFFFN 144 Query: 362 TLYDPYQEGADFVRGYPFSLREGVPTAVSHGL 457 TLYDPY+EGADFVRGYPFSLREG TAVSHGL Sbjct: 145 TLYDPYREGADFVRGYPFSLREGAHTAVSHGL 176
>UPTG_PEA (O04300) Alpha-1,4-glucan-protein synthase [UDP-forming] (EC| 2.4.1.112) (UDP-glucose:protein transglucosylase) (UPTG) (Reversibly glycosylated polypeptide) Length = 364 Score = 288 bits (738), Expect = 4e-78 Identities = 133/152 (87%), Positives = 143/152 (94%) Frame = +2 Query: 2 VIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTRTVMVPEGFDYELYNRNDINRILGPKAS 181 VIPTIRNLDFLEMWRPFF+ YHLIIVQDGDP++ + VPEGFDYELYNRNDINRILGPKAS Sbjct: 18 VIPTIRNLDFLEMWRPFFEQYHLIIVQDGDPSKVIKVPEGFDYELYNRNDINRILGPKAS 77 Query: 182 CISFKDSARRCFGYMVSKKKYVYTIDDDCFVAKDPTGKDIDALAKHIQNLLCPSTPLFFN 361 CISFKDSA RCFGYMVSKKKY+YTIDDDCFVAKDPTG +I+AL +HI+NLL PSTP FFN Sbjct: 78 CISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGHEINALEQHIKNLLSPSTPFFFN 137 Query: 362 TLYDPYQEGADFVRGYPFSLREGVPTAVSHGL 457 TLYDPY+EG DFVRGYPFSLREGVPTAVSHGL Sbjct: 138 TLYDPYREGTDFVRGYPFSLREGVPTAVSHGL 169
>UBN1_HUMAN (Q9NPG3) Ubinuclein (Ubiquitously expressed nuclear protein) (VT4)| Length = 1134 Score = 30.8 bits (68), Expect = 1.7 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%) Frame = +1 Query: 286 HGEGHRRAGQAHPEP--ALPV-HAALLQHLVRPIPGGRRLRARLPVQP 420 HG GH H P A P+ HAA+ H+ + +PG +L + P P Sbjct: 1084 HGLGHSLLAGLHSSPPHAAPLPHAAVPTHIPQSLPGASQLHGKGPAVP 1131
>HXD4_HUMAN (P09016) Homeobox protein Hox-D4 (Hox-4B) (Hox-5.1) (HHO.C13)| Length = 255 Score = 30.0 bits (66), Expect = 2.9 Identities = 20/58 (34%), Positives = 23/58 (39%) Frame = +1 Query: 277 QGPHGEGHRRAGQAHPEPALPVHAALLQHLVRPIPGGRRLRARLPVQPPGGRAHRRIA 450 Q P G G A P PA P P+PG R P QPP G A ++ A Sbjct: 80 QEPGGPGGHYAAPGEPCPAPPAPPPA------PLPGARAYSQSDPKQPPSGTALKQPA 131
>PTPRF_HUMAN (P10586) Receptor-type tyrosine-protein phosphatase F precursor (EC| 3.1.3.48) (LAR protein) (Leukocyte antigen related) Length = 1897 Score = 30.0 bits (66), Expect = 2.9 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Frame = -2 Query: 448 RYGGGHALPEAERVAAHEVGALLVWVVQGVEEERRGR--AEQVLDVLGQRVDVLP 290 R GG P E+ LL + QG EE+RR R AE++ + ++DVLP Sbjct: 1131 RVGGSMLTPRWSTPEELELDELLEAIEQGGEEQRRRRRQAERLKPYVAAQLDVLP 1185
>SGS3_DROER (P13730) Salivary glue protein Sgs-3 precursor| Length = 328 Score = 29.6 bits (65), Expect = 3.8 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Frame = +3 Query: 342 PRRSSSTPCTT-HTRRAPTSCAATRSASGRACPPPYRT 452 P+R++ PCTT AP + R + CPPP T Sbjct: 29 PKRTTPKPCTTARPTCAPVTTTTCRPPTTTRCPPPTTT 66
>PER2_HUMAN (O15055) Period circadian protein 2| Length = 1255 Score = 29.3 bits (64), Expect = 5.0 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 4/36 (11%) Frame = +3 Query: 363 PCTTHTRRAPTSCAATR----SASGRACPPPYRTAS 458 P T R P +C ATR SA GRA PP +++ S Sbjct: 950 PSRTSIPRQPCACPATRATPPSAMGRASPPLFQSRS 985
>Y024_BORBU (O51055) Hypothetical protein BB0024| Length = 379 Score = 28.9 bits (63), Expect = 6.6 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 5/59 (8%) Frame = +2 Query: 95 TRTVMVPEGFDYELYNRNDINRILGPKASCISFKDS-----ARRCFGYMVSKKKYVYTI 256 T T+ VP GF E++ N I + G S +D + F Y V+K + +YTI Sbjct: 30 TSTLKVPNGFKVEIFLNNTIEKPRG----ITSDQDGNIFIGSGSTFAYFVTKNRKIYTI 84
>CXA12_MOUSE (Q8BQU6) Gap junction alpha-12 protein (Connexin-47) (Cx47)| Length = 440 Score = 28.9 bits (63), Expect = 6.6 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = +3 Query: 333 SARPRRSSSTPCTTHTRRAPTSCAATRSASGRACPPPY 446 + R RR +S T R P CA +A+G ACPP Y Sbjct: 296 AVRGRRGASAAGPGPTPRPPP-CAFPAAAAGLACPPDY 332
>TR19L_MACFA (Q9N092) Tumor necrosis factor receptor superfamily member 19L| precursor (Receptor expressed in lymphoid tissues) Length = 430 Score = 28.9 bits (63), Expect = 6.6 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +1 Query: 7 PDDPEPGLPRDVAALLPAVPPHHRAGRRPHEDR 105 PD P+PGLP + ALL + H + + P E++ Sbjct: 381 PDSPQPGLPAEQQALLGSGGSHTKWLKPPAENK 413
>ACE1_TRIRE (Q9P8W3) Zinc finger transcription factor ace1 (ACEI)| Length = 733 Score = 28.9 bits (63), Expect = 6.6 Identities = 16/52 (30%), Positives = 24/52 (46%) Frame = +2 Query: 245 VYTIDDDCFVAKDPTGKDIDALAKHIQNLLCPSTPLFFNTLYDPYQEGADFV 400 +Y DDD IDA+ ++NL P++ Y PYQ G+ F+ Sbjct: 545 MYPADDDWLATYGAQPNTIDAMDLGLENL-SPASAASSYEQYPPYQNGSTFI 595
>PKHG4_HUMAN (Q58EX7) Puratrophin-1 (Pleckstrin homology domain-containing| family G member 4) (Purkinje cell atrophy-associated protein 1) Length = 1191 Score = 28.5 bits (62), Expect = 8.6 Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 1/49 (2%) Frame = +1 Query: 301 RRAGQAHPEPALPVH-AALLQHLVRPIPGGRRLRARLPVQPPGGRAHRR 444 R GQ+ EPA H AA + RP GG L P PP G + R Sbjct: 680 RNLGQSLSEPACHCHHAATIAACRRPEAGGGALPQASPTVPPPGSSDPR 728
>RL2_XANCP (Q8PC46) 50S ribosomal protein L2| Length = 275 Score = 28.5 bits (62), Expect = 8.6 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +1 Query: 283 PHGEGHRRAGQAHPEPALP 339 PHG G +AGQ +P P P Sbjct: 231 PHGGGEAKAGQGNPHPVTP 249
>RL2_XANAC (Q8PNS1) 50S ribosomal protein L2| Length = 275 Score = 28.5 bits (62), Expect = 8.6 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = +1 Query: 283 PHGEGHRRAGQAHPEPALP 339 PHG G +AGQ +P P P Sbjct: 231 PHGGGEAKAGQGNPHPVTP 249
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 28.5 bits (62), Expect = 8.6 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +3 Query: 354 SSTPCTTHTRRAPTSCAATRSASGRACP 437 SSTP TTHT T+ A TR+ S + P Sbjct: 4296 SSTPETTHTSTVLTTKATTRATSSTSTP 4323
>TR19L_MOUSE (Q8BX43) Tumor necrosis factor receptor superfamily member 19L| precursor Length = 436 Score = 28.5 bits (62), Expect = 8.6 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +1 Query: 7 PDDPEPGLPRDVAALLPAVPPHHRAGRRPHEDR 105 PD P+PGLP + ALL + H + + P E++ Sbjct: 387 PDSPQPGLPPEQRALLGSGGSHTKWLKPPAENK 419
>FUSB_BURCE (P24127) Fusaric acid resistance protein fusB| Length = 142 Score = 28.5 bits (62), Expect = 8.6 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = +3 Query: 333 SARPRRSSSTPCTTHTRRAPTSCAATRSASGRACPPP 443 S RRS S+ C+ +R SC+ RS G C PP Sbjct: 89 SGSSRRSRSSGCSRSSR----SCSCWRSPCGSRCAPP 121 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,920,619 Number of Sequences: 219361 Number of extensions: 1108064 Number of successful extensions: 4692 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 4464 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4689 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
